HHsearch alignment for GI: 254780413 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=100.00 E-value=0 Score=613.50 Aligned_cols=348 Identities=26% Similarity=0.384 Sum_probs=308.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHEEECC-CCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999742204307859-98387215689988489603207864433456456277899999886069
Q gi|254780413|r 442 INKRKMEIEVMQLCSILEATSDGIAIINR-EGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPSVMNHYLTEILSLD 520 (820)
Q Consensus 442 ~~~~~L~~~~~~L~~ile~~~~gI~~~D~-~G~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (820)
T Consensus 347 ~~a~~l~e~e~fnr~~i~~apvg~~~l~~~dg~~~~~n~~~~~~~~-------------~~~~~~~~~~~~~~----~~~ 409 (947)
T PRK10841 347 SNALRLEEHEQFNRKIVASAPVGICILRTSDGTNILSNELAHNYLN-------------MLTHEDRQRLTQII----CGQ 409 (947)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHH-------------HCCCCHHHHHHHHH----HCC
T ss_conf 7788998788877889861771379997068863310389999876-------------23755289999998----613
Q ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 84022348887638972899999988717887399998651444434576544668878999999999985234531748
Q gi|254780413|r 521 LRQTLEKITLGSTKEEKLLSLRIIIKKLPFSSCYSLTMHDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPL 600 (820)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL 600 (820)
T Consensus 410 ~~~~~~--~--~~~~~~~l~~~~~~~ry~~~~v~~c~~~Disar~~~e~~L~~a~~AAE~AN~AKS~FLAnMSHEIRTPL 485 (947)
T PRK10841 410 QVNFVD--V--LTSNNTNLQISFVHSRYRNENVAICVLVDVSARVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPL 485 (947)
T ss_pred CCCCEE--E--EECCCCEEEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHH
T ss_conf 788348--9--935985799998653126860799999854078999999999999999999999899875856436128
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997312687788899999999999899999999999998664318852000331799999999999999987
Q gi|254780413|r 601 TAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYAN 680 (820)
Q Consensus 601 ~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~ 680 (820)
T Consensus 486 nGIlG~lELL~~t~L----~~~Qr~~l~tI~~Ss~~LL~lINDILDfSKIEAGkl~Le~~~F~l~~lv~~v~~~~~~~A~ 561 (947)
T PRK10841 486 YGIIGNLDLLQTKEL----PKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVV 561 (947)
T ss_pred HHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999807999----9899999999999999999999999999988049847985256899999999999999999
Q ss_pred HCCEEEEEEECCCCC-EEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCC
Q ss_conf 378089997379884-6898889999999999988887188978799999980499499999978897898886642377
Q gi|254780413|r 681 EKRILIRTSFANNIP-RILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKP 759 (820)
Q Consensus 681 ~~~i~l~~~~~~~lp-~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFep 759 (820)
T Consensus 562 ~K~L~L~~~idp~vP~~v~GDp~RLrQIL~NLLsNAIKFT~~G~-I~L~V~~~-~~~L~fsV~DTGIGIsee~~~~LFep 639 (947)
T PRK10841 562 KKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDTGC-IILHVRVD-GDYLSFRVRDTGVGIPAKEVVRLFDP 639 (947)
T ss_pred HCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHEEECCCCE-EEEEEEEC-CCEEEEEEEECCCCCCHHHHHHHHCH
T ss_conf 73987999979999965860688999999998877746679958-99999984-99999999982899899999988471
Q ss_pred CEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCC
Q ss_conf 187347876667888606899999999619869999788995399999635777888
Q gi|254780413|r 760 FGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDTSHP 816 (820)
Q Consensus 760 F~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~~~p 816 (820)
T Consensus 640 F~QaD~S~tR~yGGTGLGLAI~krLVeLMGG~I~VeSe~G~GStFtf~LPL~~~~~~ 696 (947)
T PRK10841 640 FFQVGTGVQRNFQGTGLGLAICEKLINMMDGDISVDSEPGMGSQFTVRIPLYGAQYP 696 (947)
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCC
T ss_conf 115787543457998741999999999759958999169980799999756433456