HHsearch alignment for GI: 254780413 and conserved domain: PRK11100
>PRK11100 sensory histidine kinase CreC; Provisional.
Probab=100.00 E-value=0 Score=408.01 Aligned_cols=238 Identities=25% Similarity=0.428 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43457654466887899999999998523453174899999999997312687788899999999999899999999999
Q gi|254780413|r 565 KQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDL 644 (820)
Q Consensus 565 k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dl 644 (820)
T Consensus 237 ~~La~a~n~M~~~Le~-~~~~e~fva~vSHELRTPLt~I~g~~ElL~~~----~~~e~~~~~l~~I~~e~~RL~~LV~~L 311 (475)
T PRK11100 237 RDLAQALESMRVKLEG-KAYVEQYVQTLTHELKSPLAAIRGAAELLQED----PPPEDRQRFTGNILAQSARLQQLIDRL 311 (475)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999997-99999999854086511799999999997389----998999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 99866431885200033179999999999999998737808999737988468988899999999999888871889787
Q gi|254780413|r 645 LDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHFTPSGGQ 724 (820)
Q Consensus 645 Ld~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~t~~gg~ 724 (820)
T Consensus 312 L~larle~~~~~~~~~~vdl~~ll~~~~~~~~~~~~~~~i~l~~~~~~--~~v~~D~~~L~qvl~NLl~NAikys~~~g~ 389 (475)
T PRK11100 312 LELARLEQRQELEVLEPVALAALLEELVEAREAQAAAKGITLRLRPDD--AAVLGDPFLLRQALGNLLDNAIDFTPEGGT 389 (475)
T ss_pred HHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCEEEEEECCC--CEEEECHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 999875158876755487599999999999999998689299995787--669708999999999999999973899977
Q ss_pred EEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEE
Q ss_conf 99999980499499999978897898886642377187347876667888606899999999619869999788995399
Q gi|254780413|r 725 IIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLI 804 (820)
Q Consensus 725 v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f 804 (820)
T Consensus 390 I~I~~~~~-~~~~~i~V~D~G~GIp~e~l~~IFerFys~~r~~~-~~~GsGLGLsIvk~Iv~~HgG~I~v~s~~~~Gt~f 467 (475)
T PRK11100 390 ITLSAERD-GEQVALSVEDSGPGIPDYALPRIFERFYSLPRPAN-GRKSTGLGLAFVREVARLHGGEVTLRNRPEGGVLA 467 (475)
T ss_pred EEEEEEEE-CCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEE
T ss_conf 99999996-99999999984888788999886167803777999-98863079999999999859989999669980799
Q ss_pred EEEECCC
Q ss_conf 9996357
Q gi|254780413|r 805 EIIFPLY 811 (820)
Q Consensus 805 ~v~lP~~ 811 (820)
T Consensus 468 ~i~LP~~ 474 (475)
T PRK11100 468 TLTLPRH 474 (475)
T ss_pred EEECCCC
T ss_conf 9993899