HHsearch alignment for GI: 254780413 and conserved domain: PRK11359
>PRK11359 cAMP phosphodiesterase; Provisional.
Probab=99.87 E-value=2.3e-19 Score=159.73 Aligned_cols=236 Identities=9% Similarity=0.005 Sum_probs=129.2
Q ss_pred CCCCCC--CCCCEEEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCH--HHHHHHHHCCC----CCC
Q ss_conf 843557--7898105999979990999667899662899789749968882040168823--89999986379----616
Q gi|254780413|r 73 TFVFDP--IPRTVRFTWNIDAHGYLKEISEELPKTIGNYAFKMIGMRLCDVSDILHIDPN--NHIGDLLKRQN----TWY 144 (820)
Q Consensus 73 ~~~~~~--~~~~~rfvw~~D~eGr~~~vn~~~~~~~G~~~~e~iGr~~~e~~~~~~~~p~--~~i~~~l~~~~----~~~ 144 (820)
T Consensus 11 ~~~fr~~lE~s~~G-IviiD~~GrIv~~N~aa~~l~GYs~eEllG~~~~~L~p~-d~~~~~~~~l~~~~~~g~~~~~g~~ 88 (799)
T PRK11359 11 DGIFFPALEQNMMG-AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR-DLRPAHPEYIRHNREGGKARVEGMS 88 (799)
T ss_pred HHHHHHHHHHCCCE-EEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHCCC-CCCHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 79999999618854-999969990998718999987929999859988992785-3331239999987742655445640
Q ss_pred CEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCC
Q ss_conf 71688614798837999986300156887363055668985221037799999863243344543014-32002334421
Q gi|254780413|r 145 GKTTLWPIEGTNLYVPIDLAALPIYSRNREFSGFRGFGIVHVNRVDNDPRALGKRLDKKFSHLHEIKK-GHSSVEKEKYD 223 (820)
Q Consensus 145 ~~~~~~~~~g~~~~~~v~ls~~Pv~d~~g~~~G~rG~gv~r~~~~~~~~~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~~ 223 (820)
T Consensus 89 ~E~~~~RKDGs~--~~velsvs~i-~~~g~i~-~--l~ivrDITee~a~~e~~r~l----~~~ld~~~~~I~i~D~~g~i 158 (799)
T PRK11359 89 RELQLEKKDGSK--IWTRFALSKV-SAEGKVY-Y--LALVRDASVEMAQKEQTRQL----IIAVDHLDRPVIVLDPERHI 158 (799)
T ss_pred EEEEEECCCCCE--EEEEEEEEEE-CCCCCEE-E--EEEEEECCHHHHHHHHHHHH----HHHHHCCCCEEEEECCCCCE
T ss_conf 489998588889--9999999776-4799289-9--99999768999999999999----99986268729999189878
Q ss_pred CCCCCCCCCCCCC-HHCCCCCC--CCCCCCHHHH-HHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
Q ss_conf 0144455310011-00013344--1013610122-220002101520111000000024402333555421011012223
Q gi|254780413|r 224 IFSQQSPPPHLRM-KNKVSSLT--EYYAHKDDVL-KTEKYPLLTSEESSLPEQEDFHTINLNQYTKKQYFGTLQNNSKES 299 (820)
Q Consensus 224 ~~~~~~~~~~~~~-~~~~~~l~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (820)
T Consensus 159 ~~vN~a~~el~Gy~~eEl~G~~~~~ll~~pe~~~~~~~~~~~~l~~~~~~~~E~~~~~kdG~~~wv~~s~~pi~d~~g~~ 238 (799)
T PRK11359 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 (799)
T ss_pred EEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCE
T ss_conf 99877899985998789748988998348788479999999998648973058999826997999998988998488988
Q ss_pred HHHHCCCCCHHHHHHHHHHHH
Q ss_conf 321000110134565455565
Q gi|254780413|r 300 FEYLSHRNHPSLSAYFDEGEN 320 (820)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~ 320 (820)
T Consensus 239 ~~~v~i~~DITErr~~~~le~ 259 (799)
T PRK11359 239 QNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred EEEEEEEEECCHHHHHHHHHH
T ss_conf 899999973158889999998