HHsearch alignment for GI: 254780413 and conserved domain: PRK13557
>PRK13557 histidine kinase; Provisional.
Probab=100.00 E-value=0 Score=577.32 Aligned_cols=350 Identities=20% Similarity=0.300 Sum_probs=306.2
Q ss_pred HHHHHHHHHHHHHCCHHEEEC---CCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 999999999974220430785---99838721568998848960320786443345645627789999988606984022
Q gi|254780413|r 449 IEVMQLCSILEATSDGIAIIN---REGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPSVMNHYLTEILSLDLRQTL 525 (820)
Q Consensus 449 ~~~~~L~~ile~~~~gI~~~D---~~G~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (820)
T Consensus 25 ~~~~~~~~~v~~~~~~~~~~d~~~~Dg~I~~vN~af~~~tGYs~eEviGk~~~~L~~p~~~~~~~~~~~~~i~~~~--~~ 102 (538)
T PRK13557 25 HRSDIFFAAVETTRMPMIVTDPRQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVADVRDAIAERR--EI 102 (538)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHHCCCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCC--CE
T ss_conf 8899999999607973899358999987999839999987959999869998770898899999999999997599--36
Q ss_pred EEEEEEECCCCCEEEEEEEEEECCCCC----EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 348887638972899999988717887----3999986514444345765446688789999999999852345317489
Q gi|254780413|r 526 EKITLGSTKEEKLLSLRIIIKKLPFSS----CYSLTMHDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLT 601 (820)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~ 601 (820)
T Consensus 103 ~~E~~n~rKDG~~~w~~~~i~pv~d~~G~~~~~~~i~~DITerk~~E~~L~qaqkl-----ealg~~~a~isHEirnPL~ 177 (538)
T PRK13557 103 ATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKM-----EALGQLTGGIAHDFNNLLQ 177 (538)
T ss_pred EEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCHHH
T ss_conf 87999987999999999899999989999999999883444999999999999999-----9999999887887626999
Q ss_pred HHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf 99999999973126877-88899999999999899999999999998664318852000331799999999999999987
Q gi|254780413|r 602 AIIGFSEVIKNQRFGPL-GNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYAN 680 (820)
Q Consensus 602 ~I~g~~~~l~~~~~~~~-~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~ 680 (820)
T Consensus 178 ~I~G~~~lL~~~~~~~~~~~~~~~~~l~~i~~~~~r~~~Li~~lL~fsr----~~~l~~~~~~l~~lv~~~~~l~~-~~~ 252 (538)
T PRK13557 178 VMSGYLDVLQMALSKPDADRERIARSVEHIRAAAERAATLTQQLLAFAR----KQKLDGRVVNLNGLVSGMGEMAE-RTL 252 (538)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCEEECHHHHHHHHHHHHH-HHH
T ss_conf 9999999998640168889999999999999999999999999999758----27687717729999999999999-985
Q ss_pred HCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC--------------CCCEEEEEEEECCC
Q ss_conf 3780899973798846898889999999999988887188978799999980--------------49949999997889
Q gi|254780413|r 681 EKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHT--------------SNEEVILRVRDTGV 746 (820)
Q Consensus 681 ~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~--------------~~~~v~i~V~DtG~ 746 (820)
T Consensus 253 ~~~i~l~~~~~~~l~~~~~D~~~l~qvl~NLl~NA~~a~~~gg~i~i~~~~~~~~~~~~~~~~~~~~g~~v~i~V~DtG~ 332 (538)
T PRK13557 253 GDAVTIETDLAPDLWNCRIDPTQAEVALLNVLINARDAMPEGGRVTVRTENVEITEHDLAMYHQLPPGRYVSIAVTDTGS 332 (538)
T ss_pred CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 29919999807988708755899999999989879986578975999998764154210012457888789999998689
Q ss_pred CCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf 78988866423771873478766678886068999999996198699997889953999996357778
Q gi|254780413|r 747 GMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDTS 814 (820)
Q Consensus 747 GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~~ 814 (820)
T Consensus 333 GI~~e~~~rIFepFfttk~----~~~GtGLGLaIv~~iV~~~gG~I~v~S~~G~GttF~v~lP~~~~~ 396 (538)
T PRK13557 333 GMPPEILARVMEPFFTTKE----EGKGTGLGLSMVYGFAKQSGGAVRIYSEVGEGTTVRLYFPASEQA 396 (538)
T ss_pred CCCHHHHHHHHCCCEEECC----CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCC
T ss_conf 8898999977250104224----578777249999999998799599993289877999998678766