HHsearch alignment for GI: 254780413 and conserved domain: TIGR01386

>TIGR01386 cztS_silS_copS heavy metal sensor kinase; InterPro: IPR006290 Members of this family contain a sensor histidine kinase domain (IPR003661 from INTERPRO) and a domain found in bacterial signal proteins (IPR003660 from INTERPRO). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. ; GO: 0000155 two-component sensor activity, 0016775 phosphotransferase activity nitrogenous group as acceptor, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=100.00  E-value=0  Score=378.55  Aligned_cols=242  Identities=24%  Similarity=0.362  Sum_probs=227.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             44443457654466887899999999998523453174899999999997312687788899999999999899999999
Q gi|254780413|r  562 SEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIV  641 (820)
Q Consensus       562 te~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li  641 (820)
T Consensus       238 ~EL~~l~~~FNaML~RLEd~f~rLs~FSaDlAHElRTPltNL~~~tQVaLS~~R~---~~eY~e~l~snlEEl~RL~rMv  314 (483)
T TIGR01386       238 AELRELAQSFNAMLDRLEDAFQRLSQFSADLAHELRTPLTNLLGQTQVALSRPRS---GEEYREVLESNLEELERLSRMV  314 (483)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHEEECCCCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6689999999999888999999997317145666401254456650020056889---8899999986189999999999


Q ss_pred             HHHHHHHHHHCCCCCCCEEEECHHHHHH-HHHHHHHHHHHHCC--EEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHC
Q ss_conf             9999986643188520003317999999-99999999987378--08999737988468988899999999999888871
Q gi|254780413|r  642 NDLLDISKIESGKMNLHFEPVSLDEAVS-EAISLVQLYANEKR--ILIRTSFANNIPRILADLRSVKQIALNILSNAIHF  718 (820)
Q Consensus       642 ~dlLd~srieaG~~~l~~~~vdl~~lv~-~~~~~~~~~a~~~~--i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~  718 (820)
T Consensus       315 ~DMLFLAraD~~~~~~~~~~ldL~ae~~l~~~~~fE~lAee~~Piv~l~v~G~P--~~~~gD~~lfrRA~sNLLsNA~rh  392 (483)
T TIGR01386       315 EDMLFLARADNGRLALEREELDLAAELALKVAEYFEPLAEERGPIVSLRVEGEP--AEVRGDALLFRRALSNLLSNALRH  392 (483)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             899989985234567778751278888788887742027678866899983242--056024788899999999999860


Q ss_pred             CCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCC-CCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             889787999999804994999999788978988866423771873478766-6788860689999999961986999978
Q gi|254780413|r  719 TPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQI-RGEGTGLGLPLAKAMVDANMGKFYIFST  797 (820)
Q Consensus       719 t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~-~~~GtGLGLai~k~iVe~hgG~i~v~S~  797 (820)
T Consensus       393 tp~g~~I~v~~~-~~~d~~~~~v~N~G~~Ip~e~L~rLFdRFYR~D~aR~~G~~~g~GLGLAIV~SI~~~HGG~~~aeS~  471 (483)
T TIGR01386       393 TPAGSTIDVRVE-RRADEVRVSVENTGDGIPPEHLSRLFDRFYRVDPARSNGSQEGTGLGLAIVRSIMEAHGGRAEAESE  471 (483)
T ss_pred             CCCCCEEEEEEE-ECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             899885899996-1477568998358799985235655530026763332766456760489999999823986899864


Q ss_pred             CCCCEEEEEEEC
Q ss_conf             899539999963
Q gi|254780413|r  798 PAKGTLIEIIFP  809 (820)
Q Consensus       798 pG~Gt~f~v~lP  809 (820)
T Consensus       472 ~~~~t~F~l~fp  483 (483)
T TIGR01386       472 ADGKTRFKLRFP  483 (483)
T ss_pred             CCCEEEEEEECC
T ss_conf             892489876339