>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase; InterPro: IPR014265 Proteins in this entry are putative periplasmic sensor signal transduction histidine kinases. They all contain a GAF domain that is present in phytochromes and cGMP-specific phosphodiesterases, and which has been experimentally proven to be involved in protein:protein interactions. They also contain a C-terminal histidine kinase domain, which is composed of a dimerisation sub-domain and an ATP/ADP-binding phosphotransfer, or catalytic, sub-domain. The proteins in this entry are found strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria, where members of IPR014264 from INTERPRO and IPR014266 from INTERPRO also occur..

Probab=100.00 E-value=5.3e-35 Score=274.25 Aligned_cols=203 Identities=19% Similarity=0.335 Sum_probs=170.4 Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCEEEECHHH Q ss_conf 99852345317489999999999731268778889999999999989999999999999866431885-20003317999 Q gi|254780413|r 588 FLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKM-NLHFEPVSLDE 666 (820) Q Consensus 588 fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~-~l~~~~vdl~~ 666 (820) T Consensus 489 ~SaFvVHDLKNLvaQLSL~l~NA~~Hk~NP---eFq~DmL~Tv~~~v~RM~~ll~qLr------~~~~p~~~~~~~~l~~ 559 (696) T TIGR02916 489 MSAFVVHDLKNLVAQLSLLLRNAERHKDNP---EFQDDMLETVESAVNRMKKLLAQLR------EKGLPEEEKKTVDLVD 559 (696) T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCHHHHEEHHHH T ss_conf 034211025899999999999887417896---6899999989999999999999973------0689740564103899 Q ss_pred HHHHHHHHHHHHHHHCCEEEEEEE-CCC--CCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEE Q ss_conf 999999999999873780899973-798--84689888999999999998888718897879999998049949999997 Q gi|254780413|r 667 AVSEAISLVQLYANEKRILIRTSF-ANN--IPRILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRD 743 (820) Q Consensus 667 lv~~~~~~~~~~a~~~~i~l~~~~-~~~--lp~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~D 743 (820) T Consensus 560 L~~~~~~~k~~q--~p~~e--~~~~~~~~rl-~~~a~~erl~rV~gHL~QNAlEAT~~~G~V~~~~~~~~~~~a~i~i~D 634 (696) T TIGR02916 560 LLRRVIASKRAQ--QPRPE--VSIEDTDFRL-SVRADRERLERVLGHLVQNALEATPEEGRVKIRVERECGGAAVIEIED 634 (696) T ss_pred HHHHHHHHHHHC--CCCEE--EEECCCCEEE-EEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEE T ss_conf 999999998631--89448--9971754178-887528889999999999888604999628999874188822799986 Q ss_pred CCCCCCHHH-HHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEC Q ss_conf 889789888-664237718734787666788860689999999961986999978899539999963 Q gi|254780413|r 744 TGVGMTNYE-LEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFP 809 (820) Q Consensus 744 tG~GI~~~~-~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP 809 (820) T Consensus 635 ~G~GM~~~FiR~rLF~PF~tTK~-----~aGMGIG~YE~~~yv~e~GG~i~V~S~pG~Gt~ftl~LP 696 (696) T TIGR02916 635 SGCGMSEAFIRERLFKPFDTTKG-----NAGMGIGVYECRQYVEELGGRIEVESTPGKGTIFTLVLP 696 (696) T ss_pred CCCCCCHHHHHHHCCCCCCCCCC-----CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC T ss_conf 57899858998407899754456-----678720189999999983890588863588548887449

HHsearch alignment for GI: 254780413 and conserved domain: TIGR02916