HHsearch alignment for GI: 254780413 and conserved domain: cd00075

>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins.

Probab=99.92  E-value=1.1e-24  Score=198.83  Aligned_cols=102  Identities=37%  Similarity=0.648  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHCCCC-CCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf             999999999888871889-7879999998049949999997889789888664237718734787666788860689999
Q gi|254780413|r  704 VKQIALNILSNAIHFTPS-GGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAK  782 (820)
Q Consensus       704 l~Qvl~NLl~NAik~t~~-gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k  782 (820)
T Consensus         1 l~~vl~nLl~NAik~~~~~~~~I~i~~~-~~~~~~~i~V~D~G~Gi~~~~~~~if~~f~~~~~--~~~~~g~GlGL~i~~   77 (103)
T cd00075           1 LQQVLLNLLSNAIKHTPEGGGRITISVE-RDGDHLEIRVEDNGPGIPEEDLERIFERFSDGSR--SRKGGGTGLGLSIVK   77 (103)
T ss_pred             CHHHHHHHHHHHHHHCCCCCCEEEEEEE-ECCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCC--CCCCCCCCCHHHHHH
T ss_conf             9699999999999867899948999999-8399999999977994088999760697501788--877898650599999


Q ss_pred             HHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf             99996198699997889953999996
Q gi|254780413|r  783 AMVDANMGKFYIFSTPAKGTLIEIIF  808 (820)
Q Consensus       783 ~iVe~hgG~i~v~S~pG~Gt~f~v~l  808 (820)
T Consensus        78 ~i~~~~~G~i~i~s~~~~Gt~~~i~l  103 (103)
T cd00075          78 KLVELHGGRIEVESEPGGGTTFTITL  103 (103)
T ss_pred             HHHHHCCCEEEEEECCCCCEEEEEEC
T ss_conf             99998899899996599919999989