RPSBLAST alignment for GI: 254780413 and conserved domain: TIGR02938

>gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. Length = 494

 Score = 51.1 bits (122), Expect = 1e-06
 Identities = 102/520 (19%), Positives = 209/520 (40%), Gaps = 66/520 (12%)

Query: 324 ETVDKCPIPFFVYS-HGNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIK 382
           +TVD+ P+   +     N+ YAN +F  +T Y      EI G   ++L       +N   
Sbjct: 8   QTVDQAPLAISITDLKANILYANDAFTRITGYTKE---EIIGKNESVL-------SNHTT 57

Query: 383 PVMLYRSDRTCIAA----SARLHTIQWNRENSLA-MTFIPFEKANQFPEN-----MPQNG 432
           P  +Y++    +A     + +L   + + E  LA +T  P    N+  E      M ++ 
Sbjct: 58  PPEVYQALWGSLAEQKPWAGKLLNRRKDGELYLAELTVAPV--LNEAGETTHFLGMHRDI 115

Query: 433 IEPEDVDTRINKRKMEIEVMQLCSILEATSDGIAIINREGIILSTNRAVSKLFGYPVEDI 492
            E   ++  +  +K+ IE     S+++A      +++  G ++  N+   KL        
Sbjct: 116 TELHRLEQVVANQKLLIE-----SVVDAAPVAFVLLDPTGRVILDNQEYKKLATDLRVKE 170

Query: 493 LRKPFTVFLEQNTPSVMNHYLTEILSLDLRQTLEKITLGSTKEEKLLSLR---IIIKKLP 549
                   L +     +     + L+   R+   +   G  +  + LS     I ++   
Sbjct: 171 PAHTVLDLLREAWREALAENWPQQLAFSNREA--RFDRGGGRPARWLSCTGSVIGMESDC 228

Query: 550 FSSCYS--------LTMHDISEWK--QEKNKLSHAKKI-AEKE--SSHKSDFLARVSHEI 596
             S +         LT+ DIS  +  QE+ +LS  + + AE+E   + +    A + H +
Sbjct: 229 ADSFFCAAEQPYLLLTIADISNLREEQERARLSALQALMAEEERLEAIRETLSAAI-HRL 287

Query: 597 RTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMN 656
           + P+  +I  +  +  +R    GNP           +G   ++ +  ++  S  E     
Sbjct: 288 QGPMN-LISAAISVLQRRGDDAGNPASAAMLQQALSAGREHMEALRQVIPQSPQEI---- 342

Query: 657 LHFEPVSLDEAVSEAISLV--QLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSN 714
               PV+L++ + + I+L   +L A    I++    A  +P IL     ++ +   ++ N
Sbjct: 343 --VVPVNLNQILRDVITLSTPRLLA--AGIVVDWQPAATLPAILGRELQLRSLFKALVDN 398

Query: 715 AI----HFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIR 770
           AI           ++ I TT  + + +++ + D+G G+      K  +PF          
Sbjct: 399 AIEAMNIKGWKRRELSI-TTALNGDLIVVSILDSGPGIPQDLRYKVFEPFFTTKGGS--- 454

Query: 771 GEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPL 810
            +  G+GL +A+ +V  + G   +    ++G  I + F +
Sbjct: 455 RKHIGMGLSVAQEIVADHGGIIDLDDDYSEGCRIIVEFRV 494