RPSBLAST alignment for GI: 254780413 and conserved domain: TIGR03785
>gnl|CDD|163497 TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase. Length = 703
Score = 55.9 bits (135), Expect = 4e-08
Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 22/230 (9%)
Query: 588 FLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRS--GNLVLD-IVNDL 644
+R+SHE+RTP+ A++ S ++N L E Y++R+ G L I+N++
Sbjct: 488 MSSRLSHELRTPV-AVVRSS--LENLELQALEQ----EKQKYLERAREGTERLSMILNNM 540
Query: 645 LDISKIESGKMNLHFEPVSLDEAVSEAISLVQ-LYANEKRIL-IRTS--FANNIPRILAD 700
+ +++E + E L E +S + Q Y ++ L I + P ++A
Sbjct: 541 SEATRLEQAIQSAEVEDFDLSEVLSGCMQGYQMTYPPQRFELNIPETPLVMRGSPELIA- 599
Query: 701 LRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPF 760
Q+ ++ NA F+P G I + + +L V + G + E+
Sbjct: 600 -----QMLDKLVDNAREFSPEDGLIEVG-LSQNKSHALLTVSNEGPPLPEDMGEQLFDSM 653
Query: 761 GQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTP-AKGTLIEIIFP 809
+ + GLGL + + + D + G+ + G + I P
Sbjct: 654 VSVRDQGAQDQPHLGLGLYIVRLIADFHQGRIQAENRQQNDGVVFRISLP 703