RPSBLAST alignment for GI: 254780413 and conserved domain: TIGR03785

>gnl|CDD|163497 TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase. Length = 703
 Score = 55.9 bits (135), Expect = 4e-08
 Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 22/230 (9%)

Query: 588 FLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRS--GNLVLD-IVNDL 644
             +R+SHE+RTP+ A++  S  ++N     L      E   Y++R+  G   L  I+N++
Sbjct: 488 MSSRLSHELRTPV-AVVRSS--LENLELQALEQ----EKQKYLERAREGTERLSMILNNM 540

Query: 645 LDISKIESGKMNLHFEPVSLDEAVSEAISLVQ-LYANEKRIL-IRTS--FANNIPRILAD 700
            + +++E    +   E   L E +S  +   Q  Y  ++  L I  +       P ++A 
Sbjct: 541 SEATRLEQAIQSAEVEDFDLSEVLSGCMQGYQMTYPPQRFELNIPETPLVMRGSPELIA- 599

Query: 701 LRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPF 760
                Q+   ++ NA  F+P  G I +     +    +L V + G  +     E+     
Sbjct: 600 -----QMLDKLVDNAREFSPEDGLIEVG-LSQNKSHALLTVSNEGPPLPEDMGEQLFDSM 653

Query: 761 GQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTP-AKGTLIEIIFP 809
             + +         GLGL + + + D + G+    +     G +  I  P
Sbjct: 654 VSVRDQGAQDQPHLGLGLYIVRLIADFHQGRIQAENRQQNDGVVFRISLP 703