RPSBLAST alignment of GI: 254780413 and protein with PDBid: 1b3q
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi- domains protein; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* Length = 379
Score = 70.5 bits (171), Expect = 2e-12
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 58/267 (21%)
Query: 585 KSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDL 644
K D L + E+ + I+ + + +D S + + I DL
Sbjct: 10 KLDNLMDLMGELVIARSRILETLKKYNIKE---------------LDESLSHLSRITLDL 54
Query: 645 LDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRS- 703
++ + V + + +V+ A + + +
Sbjct: 55 QNVV--------MKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEE 106
Query: 704 VKQIALNILSNAIHFTPSGGQIIISTTHTS-----------NEEVILRVRDTGVGMTNY- 751
+ + L++L NAI + I+ V++ V D G G+
Sbjct: 107 IGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEK 166
Query: 752 ----------------------ELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANM 789
E+ + G + G G+G+ + K +V++
Sbjct: 167 IIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLN 226
Query: 790 GKFYIFSTPAKGTLIEIIFPLYDTSHP 816
G I S KGT + I PL
Sbjct: 227 GSMGIESEKDKGTKVTIRLPLTLAIIC 253