RPSBLAST alignment of GI: 254780413 and protein with PDBid: 1y8o
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: LPA ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Length = 419
Score = 99.0 bits (246), Expect = 4e-21
Identities = 32/308 (10%), Positives = 96/308 (31%), Gaps = 32/308 (10%)
Query: 539 LSLRII-IKKLPFSSCYSLTMHDISEW-KQEKNKLSHAKKIAEKESSHKSDFLARVSHEI 596
L+ + + LP + ++ + W Q +L + + ++ +FL +
Sbjct: 70 LANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVR 129
Query: 597 RTPLTAII----GFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIES 652
+ G E + F P + + + + ++N + ++
Sbjct: 130 NRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDT 189
Query: 653 GKMNLHF-----EPVSLDEAVSEAISLVQLYANEK--------RILIRTSFANNIPRILA 699
++ ++ + V +A ++ + + +++
Sbjct: 190 NPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVY 249
Query: 700 DLRSVKQIALNILSNAIHFTP-------SGGQIIISTTHTSNEEVILRVRDTGVGMTNYE 752
+ + + N++ T G + + E++ +++ D G G+ +
Sbjct: 250 VPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRK 309
Query: 753 LEKAMKPF------GQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEI 806
+++ + ++ G G GLP+++ G ++S GT I
Sbjct: 310 IDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 369
Query: 807 IFPLYDTS 814
+
Sbjct: 370 YLKALSSE 377