RPSBLAST alignment of GI: 254780413 and protein with PDBid: 3a0r

>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima} Length = 349

 Score =  194 bits (495), Expect = 6e-50
 Identities = 78/355 (21%), Positives = 135/355 (38%), Gaps = 22/355 (6%)

Query: 456 SILEATSDGIAIINREGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPSVMNHYLTE 515
           SILE+    I  ++++G I   N+   +LFG   E++L +      +      +      
Sbjct: 12  SILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPD---FEEIGSVAES 68

Query: 516 ILSLDLRQTLEKITLGSTKEEKLLSLRIIIKKLPFSSCYSLTMHDISEWKQEKNKLSHAK 575
           +        L     G           I       +    L    I+     +      +
Sbjct: 69  VFENKEPVFLNFYKFGER------YFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEE 122

Query: 576 KIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGN 635
           +   +  S   +  ARV+HEIR P+T I GF   +K     P       +Y N I    +
Sbjct: 123 RKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDP---ETLKKYINIITNELS 179

Query: 636 LVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIP 695
            +  IV ++L+ SK    +  L F   +L+E + E   L +    +  I       N   
Sbjct: 180 RLETIVKEILEYSK---ERQVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDL 236

Query: 696 RILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEK 755
           R+ AD   +KQ+ +N++ NAI  T   G+I I++      +V + V ++G  +     EK
Sbjct: 237 RVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDM-YTKVRVSVWNSGPPIPEELKEK 295

Query: 756 AMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPL 810
              PF         + +GTGLGL + + +++   G          G +     P 
Sbjct: 296 IFSPF------FTTKTQGTGLGLSICRKIIEDEHGGKIWTENRENGVVFIFEIPK 344