HHsearch alignment for GI: 254780414 and conserved domain: CHL00197

>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional.
Probab=99.97  E-value=9.6e-31  Score=239.95  Aligned_cols=174  Identities=25%  Similarity=0.432  Sum_probs=135.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCC-CCCCCCHHHHH-CCCCEEE
Q ss_conf             886999988970578899888865940698528989889972399799998538899999-99753768980-8998899
Q gi|254780414|r    7 SSKVLIIDFGSQFTQLIARRVRESKVYCEVIAFKNALDYFKEQNPQAIILSGSPASSLDI-DSPQIPKEILE-SNIPLLG   84 (520)
Q Consensus         7 ~~~IlIlDfGSQytqLIaRriRelgVyseI~P~~~~~e~i~~~~p~GIILSGGP~SV~d~-~ap~~~~~I~~-~~iPILG   84 (520)
T Consensus       194 ~~~VvviD~GiK~n--ILr~L~~~g~~v~VvP~~~~~~~I~~~~PDGIfLSNGPGDP~~~~~~i~~i~~li~~~~iPifG  271 (383)
T CHL00197        194 PLRIIVIDFGVKYN--ILRRLKSFGCEITIVPATSTYQDIMAYQPDGILLSNGPGDPSTVHYGIKTVKKLIKKANIPIFG  271 (383)
T ss_pred             CCEEEEEECCCCHH--HHHHHHHCCCEEEEECCCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             74599996777188--9999997899899989998511342568888997899999789899999999999648997899


Q ss_pred             ECHHHHHHHHHCCCEEEECCCCCCCE-EEEEECCCCCCCCCCCCCCCCEEEEE---ECCCHH--HCCCCC-CCEEECCC-
Q ss_conf             77899998997096999869866103-66752388622278726655336860---022011--012444-21123239-
Q gi|254780414|r   85 ICYGQQIMCQSLGGKTKNSQSREFGR-AFIEIKKNCSLLKGMWEKGSKQQVWM---SHGDQV--EHIPEG-FEVIASSD-  156 (520)
Q Consensus        85 ICyG~QlLa~~~GG~V~~~~~~EyG~-~~I~i~~~~~lf~gl~~~~~~~~Vwm---SH~D~V--~~lP~g-f~viA~S~-  156 (520)
T Consensus       272 ICLGHQlLalA~GakT~KmkfGHrG~NhPV~~---------------t~kv~ITSQNHGyaVd~~sl~~~~~~vt~~nln  336 (383)
T CHL00197        272 ICMGHQILSLALEAKTFKLKFGHRGLNHPSGL---------------NQQVEITSQNHGFAVNAESLAKNKVYVTHFNLN  336 (383)
T ss_pred             ECHHHHHHHHHCCCEEEECCCCCCCCCCCCCC---------------CCCEEEEECCCCEEECCCCCCCCCCEEEEECCC
T ss_conf             55889999997398375668887798866015---------------875799627876176744478873189999388


Q ss_pred             CCCEEEEEECCCCEEEEEEEEHHHCCCH-HHHHHHHHHHHHC
Q ss_conf             8317889863500112465212221520-2577998755010
Q gi|254780414|r  157 STPFAFIADEKRKYYAVQFHPEVVHTVG-GSQLIDNFVHHVA  197 (520)
Q Consensus       157 ~~~iaai~~~~~~iyGVQFHPEV~hT~~-G~~iL~NFl~~Ic  197 (520)
T Consensus       337 D~tvEG~~~~~~p~fsvQfHPEa~pGP~Ds~~lF~~F~~~~~  378 (383)
T CHL00197        337 DGTVAGISHSPKPYFSVQYHPEASPGPHDADYLFEYFIEIMK  378 (383)
T ss_pred             CCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             896148698899878877488989898730889999999999