HHsearch alignment for GI: 254780414 and conserved domain: COG0171
>COG0171 NadE NAD synthase [Coenzyme metabolism].
Probab=99.38 E-value=2.8e-11 Score=100.89 Aligned_cols=174 Identities=20% Similarity=0.301 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHCC-----CCEEEEEECCCC-CCCCCHHHHHHHHHHC
Q ss_conf 06789999999976504---44036640564047799999986223-----656999973895-5156278999988623
Q gi|254780414|r 205 MSSYHKEIVSRIKEQVG---NERVICAVSGGVDSTVAAFLIYEAIG-----INLTCVLVDHGF-MRKNEVENIISLFKGY 275 (520)
Q Consensus 205 ~~~~~~~~i~~Ir~~vg---~~kVi~~lSGGVDStV~A~Ll~kAig-----~~l~~vfVD~Gl-lRknE~~~v~~~~~~~ 275 (520)
T Consensus 5 ~~~~~~~~v~fl~~~l~~~~~k~~VlGiSGGiDSa~~~~La~~A~~~~~~~~~~~av~mP~~~~~~~~-~~da~~~~~~- 82 (268)
T COG0171 5 LEEEINRLVDFLRDYLKKAGFKGVVLGLSGGIDSALVLALAVRALGKGDSKENVLAVRLPYGYTVQAD-EEDAQDLAEA- 82 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCC-HHHHHHHHHH-
T ss_conf 99999999999999999739998699766681999999999998565651243266867887765347-9999999998-
Q ss_pred CCCCEEEEEHHHHHH---HHHCCCC-CHHHHHHHHHHHHHHHH----HHHHHHCCCCEEEEECCCCCHHHHHHC-CCCCC
Q ss_conf 698579975889999---9966898-88999988756589999----999974399709986462202454202-46777
Q gi|254780414|r 276 PNFPLRVVDASERFI---RKLKNIV-DPETKRKVIGQLFIEVF----EEEAKKIGGAQFLGQGTLYPDVIESIS-FFGGP 346 (520)
Q Consensus 276 ~~~~l~~vda~~~Fl---~~L~gv~-DPE~KRkiIG~~Fi~vf----~~~a~~~~~~~~L~QGTlypDvIES~~-~~~~~ 346 (520)
T Consensus 83 lg~~~~~i~I~~~v~~~~~~~~~~~~~~~~~~~~~~NikaR~Rm~~lY~~An~---~~~lVlGT--gn~sE~~~Gy~T-- 155 (268)
T COG0171 83 LGIDYKEINIKPAVDAFLKKLLKLFLGIYLEDLALGNIKARLRMVILYAIANK---LGGLVLGT--GNKSELALGYFT-- 155 (268)
T ss_pred HCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CCCEEECC--CCHHHHHCCCEE--
T ss_conf 29966997528889998876666523442112777645099999999999855---59789758--848778607443--
Q ss_pred CCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
Q ss_conf 630344302320113203202237898738999999998199988942688898
Q gi|254780414|r 347 SSIIKSHHNVGGLPEHMDMKLVEPLKELFKDEVRLLGKELRLPDSFVERHPCPG 400 (520)
Q Consensus 347 ~~~IKsHHNvgglp~~~~~~liEPl~~l~KdEVR~lg~~Lglp~~~~~RhPFPG 400 (520)
T Consensus 156 ----k--yG------Dg-~~d~~Pi~~L~KtqV~~La~~l~ipe~I~~k~PTAe 196 (268)
T COG0171 156 ----K--YG------DG-AVDINPIADLYKTQVYALARHLGIPEEILKKPPTAD 196 (268)
T ss_pred ----C--CC------CC-CCCHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCC
T ss_conf ----2--06------76-447054148758999999987399999963999911