HHsearch alignment for GI: 254780414 and conserved domain: PRK01565

>PRK01565 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.62  E-value=5.2e-07  Score=70.32  Aligned_cols=156  Identities=24%  Similarity=0.375  Sum_probs=108.7

Q ss_pred             HC-CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH-HHHHH---HHHH-CCCCCEEEEEHHHHHHHHH
Q ss_conf             04-44036640564047799999986223656999973895515627-89999---8862-3698579975889999996
Q gi|254780414|r  220 VG-NERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNEV-ENIIS---LFKG-YPNFPLRVVDASERFIRKL  293 (520)
Q Consensus       220 vg-~~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE~-~~v~~---~~~~-~~~~~l~~vda~~~Fl~~L  293 (520)
T Consensus       173 vGt~Gk~l~LlSGGIDSPVAa~~mmkR-G~~v~~v~f~~~p~t~~~a~~kv~~l~~~L~~y~~~~kl~~v~f~~~-~~~i  250 (399)
T PRK01565        173 VGTSGKALLLLSGGIDSPVAGYLAMKR-GVEIEAVHFHSPPYTSERAKEKVIDLARILAKYGGRIKLHVVPFTEI-QEEI  250 (399)
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHHC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH-HHHH
T ss_conf             677785799861787539999999855-98799999868998778999999999999997288855999663999-9999


Q ss_pred             CCCCCHHHHHHHHHH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHH
Q ss_conf             689888999988756-5899999999743997099864622024542024677763034430232011320320223789
Q gi|254780414|r  294 KNIVDPETKRKVIGQ-LFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLK  372 (520)
Q Consensus       294 ~gv~DPE~KRkiIG~-~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~  372 (520)
T Consensus       251 ~~~~-~~~~~~vl~RR~M~riA~~iA~~~-~~~alvTG-------ESLGQVA--SQTl~---Nl~~i~~~~~~pVlRPLI  316 (399)
T PRK01565        251 KKKV-PESYLMTLMRRFMMRIADKIAEKR-GALAIVTG-------ESLGQVA--SQTLE---SMQAINAVTNLPVLRPLI  316 (399)
T ss_pred             HHCC-CCCEEEHHHHHHHHHHHHHHHHHC-CCCEEEEC-------CHHHHHH--HHHHH---HHHHHHHHCCCCCCCCCC
T ss_conf             8608-800385999999999999999985-99789824-------1355676--75567---788887521775446655


Q ss_pred             HHHHHHHHHHHHHHCCCHH
Q ss_conf             8738999999998199988
Q gi|254780414|r  373 ELFKDEVRLLGKELRLPDS  391 (520)
Q Consensus       373 ~l~KdEVR~lg~~Lglp~~  391 (520)
T Consensus       317 g~DK~EII~~Ar~IGTye~  335 (399)
T PRK01565        317 GMDKEEIIEIAKEIGTYDI  335 (399)
T ss_pred             CCCHHHHHHHHHHCCCCHH
T ss_conf             7898999999987096011