HHsearch alignment for GI: 254780414 and conserved domain: PRK06278
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated.
Probab=97.45 E-value=0.0025 Score=44.08 Aligned_cols=194 Identities=20% Similarity=0.297 Sum_probs=95.8
Q ss_pred ECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCCC--CCCCCHHHHHCCCCEEEECHHHHH
Q ss_conf 889705788998888659406985289898899723997999985388999999--975376898089988997789999
Q gi|254780414|r 14 DFGSQFTQLIARRVRESKVYCEVIAFKNALDYFKEQNPQAIILSGSPASSLDID--SPQIPKEILESNIPLLGICYGQQI 91 (520)
Q Consensus 14 DfGSQytqLIaRriRelgVyseI~P~~~~~e~i~~~~p~GIILSGGP~SV~d~~--ap~~~~~I~~~~iPILGICyG~Ql 91 (520)
T Consensus 18 ~FG~LPTkii----~enn-----------~k~ik--dLD~lIIPGGS--lvEs~sl~~elk~eI~~f~~~IiGICsGFQi 78 (482)
T PRK06278 18 NFGNLPTKII----KENN-----------IKAIK--DLDMLIIPGGS--IVESGSLTDELKKEILDFDNYILGICSGFQI 78 (482)
T ss_pred HCCCCCHHHH----CCCC-----------HHHHH--CCCEEEECCCC--EEECCCCCHHHHHHHHHCCCEEEEECHHHHH
T ss_conf 2167863664----4367-----------22353--07579965973--5733775778999998627858996116788
Q ss_pred HHHHCC-CEEEECCC-CC-CCEEEEEEC------------CCCCCCCCCCCCCCCEEEEEECCCHHHC-CCCCCCEEECC
Q ss_conf 899709-69998698-66-103667523------------8862227872665533686002201101-24442112323
Q gi|254780414|r 92 MCQSLG-GKTKNSQS-RE-FGRAFIEIK------------KNCSLLKGMWEKGSKQQVWMSHGDQVEH-IPEGFEVIASS 155 (520)
Q Consensus 92 La~~~G-G~V~~~~~-~E-yG~~~I~i~------------~~~~lf~gl~~~~~~~~VwmSH~D~V~~-lP~gf~viA~S 155 (520)
T Consensus 79 L~~kiDIGRKS~vPIikeGLGLLdV~fsPlictDrV~f~i~~~~~~~~~~~~~~GFHC---HTYG~Iei~~~~tk~lt~S 155 (482)
T PRK06278 79 LAEKIDIGRKSPVPIIKEGLGLLNVEFSPLICTDRVKFNIENDSFFGEKNESGTGFHC---HTYGNIEITNNSTKKLTYS 155 (482)
T ss_pred HHHHCCCCCCCCCCEEECCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEEE---ECCCCEEECCCCCCEEEHH
T ss_conf 7764376667999741004552014661136515156897514003555773312553---1014378427887522465
Q ss_pred C-----------CCCEEEEEECCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH----
Q ss_conf 9-----------8317889863500112465212221520257799875501064411140678999999997650----
Q gi|254780414|r 156 D-----------STPFAFIADEKRKYYAVQFHPEVVHTVGGSQLIDNFVHHVAGIQDNWVMSSYHKEIVSRIKEQV---- 220 (520)
Q Consensus 156 ~-----------~~~iaai~~~~~~iyGVQFHPEV~hT~~G~~iL~NFl~~Ic~~~~~W~~~~~~~~~i~~Ir~~v---- 220 (520)
T Consensus 156 ~i~klNYk~~~~~~IlSG~~--kgkV~GTmVHn~LD----n~~v~~N~l-~~l~~~e~e~e--eIf~kNk~lk~~lk~~~ 226 (482)
T PRK06278 156 KIQKLNYKMVGKQNILSGVF--KGNVYGTMVHNLLD----NNFVVNNIL-KYLDITEEEKE--EIFKKNKILKEKLKSES 226 (482)
T ss_pred HHHHHCCCCCCCCEEEEEEC--CCCCHHHHHHHHCC----HHHHHHHHH-HHCCCCHHHHH--HHHHHHHHHHHHHHHHH
T ss_conf 54340234367640552001--68461454555424----288999999-87288778899--99987699999998873
Q ss_pred ---------------CCCCEEEEECCCCHHHHH
Q ss_conf ---------------444036640564047799
Q gi|254780414|r 221 ---------------GNERVICAVSGGVDSTVA 238 (520)
Q Consensus 221 ---------------g~~kVi~~lSGGVDStV~ 238 (520)
T Consensus 227 ~i~~~~~~~~~~k~~~~kkgiiLl~TgS~SGKT 259 (482)
T PRK06278 227 KISTNNKKIDRNKNPEVKKGIILLATGSESGKT 259 (482)
T ss_pred CCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCE
T ss_conf 666674023304788899659998437877743