HHsearch alignment for GI: 254780414 and conserved domain: PRK08349

Probab=98.89  E-value=7.9e-09  Score=83.34  Aligned_cols=178  Identities=21%  Similarity=0.318  Sum_probs=120.7

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC---CCEEEEEHHHHH---HHHHCCCC
Q ss_conf             036640564047799999986223656999973895515627899998862369---857997588999---99966898
Q gi|254780414|r  224 RVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNEVENIISLFKGYPN---FPLRVVDASERF---IRKLKNIV  297 (520)
Q Consensus       224 kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE~~~v~~~~~~~~~---~~l~~vda~~~F---l~~L~gv~  297 (520)
T Consensus         2 Kvl~LlSGGiDSPVAa~~mmKR-G~~V~~lhf~~~~~~~~kv~~~~~~L~~~~~~~~~~~~iv~~~~~~~~i~~~i~~~~   80 (198)
T PRK08349          2 KVVALLSSGIDSPVAIYLMLSR-GVEIYPLHFRQDEKKEHKARELVEILQEIHGGKVKDPVIVDAYEVQGPVFEKLREIG   80 (198)
T ss_pred             EEEEEECCCCCHHHHHHHHHHC-CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCC
T ss_conf             4999965884389999999977-997999986387788999999999999970888752899772253289999998607


Q ss_pred             CHHHHHHHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHH
Q ss_conf             889999887-5658999999997439970998646220245420246777630344302320113203202237898738
Q gi|254780414|r  298 DPETKRKVI-GQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLKELFK  376 (520)
Q Consensus       298 DPE~KRkiI-G~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~~l~K  376 (520)
T Consensus        81 ~-~~~~~vl~rr~M~riA~~iA~~~-g~~aivTG-------EsLGQVA--SQTl~---NL~~i~~~~~~pVlRPLig~DK  146 (198)
T PRK08349         81 K-EKWTCLFCKYTMYRVAERYAHEI-GAKAIVTG-------DSLGQVA--SQTLD---NLMVISTATDLPILRPLIGLDK  146 (198)
T ss_pred             C-CCCEEHHHHHHHHHHHHHHHHHC-CCCEEEEC-------CHHHHHH--HHHHH---HHHHHHHHHCCCCCCCCCCCCH
T ss_conf             7-65130999999999999999985-99889845-------2167888--99998---8999987506766477667998


Q ss_pred             HHHHHHHHHHCCCHHHHCCCCCCCC-CCEEEECCCCCHHHHHHHHH
Q ss_conf             9999999981999889426888983-11122100036789999999
Q gi|254780414|r  377 DEVRLLGKELRLPDSFVERHPCPGP-GLAIRCIGEITEERINILRE  421 (520)
Q Consensus       377 dEVR~lg~~Lglp~~~~~RhPFPGP-GLaiRi~g~vt~e~~~i~r~  421 (520)
T Consensus       147 ~EII~~Ar~IGTye~S~--~~-~~cC~~~pk--~P~t~~~~~~i~~  187 (198)
T PRK08349        147 EEIVRIAKEIGTFEISI--EP-EPPCPFVPK--FPVVRAGLGEFEK  187 (198)
T ss_pred             HHHHHHHHHHCCHHHHC--CC-CCCCEEECC--CCCCCCCHHHHHH
T ss_conf             99999999819553432--89-977441089--8826889999999