HHsearch alignment for GI: 254780414 and conserved domain: PRK08384
>PRK08384 thiamine biosynthesis protein ThiI; Provisional.
Probab=97.66 E-value=0.00033 Score=50.29 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=84.4
Q ss_pred HC-CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHH-CCCCCEEEEEHHHHHHHHHCCCC
Q ss_conf 04-44036640564047799999986223656999973895515627899998862-36985799758899999966898
Q gi|254780414|r 220 VG-NERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNEVENIISLFKG-YPNFPLRVVDASERFIRKLKNIV 297 (520)
Q Consensus 220 vg-~~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE~~~v~~~~~~-~~~~~l~~vda~~~Fl~~L~gv~ 297 (520)
T Consensus 176 vGs~Gk~l~LlSGGi-SPVAa~~mmKR-G~~v~~vhf~~~~~~~~kv~~l~~~L~~y~~~~~~~~~~~~----------- 242 (310)
T PRK08384 176 IGTQGKMVGLLSDEL-SAVAIFLMMKR-GVEVIPVHIGMGEKNLEKVRKLWNQLKKYSYGSKGRLVVVK----------- 242 (310)
T ss_pred CCCCCCEEEEECCCC-CHHHHHHHHHC-CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC-----------
T ss_conf 467884899953886-39999999856-98799998568878999999999999986799846999966-----------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHH
Q ss_conf 88999988756589999999974399709986462202454202467776303443023201132032022378987389
Q gi|254780414|r 298 DPETKRKVIGQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLKELFKD 377 (520)
Q Consensus 298 DPE~KRkiIG~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~~l~Kd 377 (520)
T Consensus 243 -~~-----------~~a~~ia~~~-~~~alvTG-------EsLGQVA--SQTl~---nl~~i~~~~~~PVlRPLIg~DK~ 297 (310)
T PRK08384 243 -NF-----------ERVNKIIRDF-GAKGVVKG-------LRPEQLA--SETLE---NIYEDSRMFDVPVYYPLIALPDE 297 (310)
T ss_pred -HH-----------HHHHHHHHHH-CCCEEEEC-------CCHHHHH--HHHHH---HHHHHHHCCCCCCCCCCCCCCHH
T ss_conf -59-----------9999999985-99899977-------4125545--45798---89999730488730385689989
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998199
Q gi|254780414|r 378 EVRLLGKELRL 388 (520)
Q Consensus 378 EVR~lg~~Lgl 388 (520)
T Consensus 298 EII~~Ar~IGT 308 (310)
T PRK08384 298 YIEKVKEKIGT 308 (310)
T ss_pred HHHHHHHHCCC
T ss_conf 99999986388