HHsearch alignment for GI: 254780414 and conserved domain: PRK08557

Probab=98.60  E-value=4.5e-07  Score=70.76  Aligned_cols=185  Identities=18%  Similarity=0.164  Sum_probs=113.4

Q ss_pred             CCHHHHHHHHHHHHHHHCCC-----CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             40678999999997650444-----0366405640477999999862236569999738955156278999988623698
Q gi|254780414|r  204 VMSSYHKEIVSRIKEQVGNE-----RVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNEVENIISLFKGYPNF  278 (520)
Q Consensus       204 ~~~~~~~~~i~~Ir~~vg~~-----kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE~~~v~~~~~~~~~~  278 (520)
T Consensus       160 ~l~~~e~~Av~fir~~~~k~~~~~~pV~VSfSGGKDS~a~L~La~~a~-~~~~vvF~DTGlE-fPeT~eyve~~~~~~~~  237 (420)
T PRK08557        160 RLDEMVENSIEILQDYVEKYKRKGYAINASFSGGKDSAVSTLLSKEVI-PDLDVVFIDTGLE-YPETLNYVKDFAKKYDI  237 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCCCC-CHHHHHHHHHHHHHCCC
T ss_conf             999999999999999999716679746996068789999999999854-8816999628877-72389999999998099


Q ss_pred             CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHH-HHHHHHHHHHHC-CCCE-EEEECCCCCHHHHHHCCCCCCCCEEEEEEC
Q ss_conf             5799758899999966898889999887565-899999999743-9970-998646220245420246777630344302
Q gi|254780414|r  279 PLRVVDASERFIRKLKNIVDPETKRKVIGQL-FIEVFEEEAKKI-GGAQ-FLGQGTLYPDVIESISFFGGPSSIIKSHHN  355 (520)
Q Consensus       279 ~l~~vda~~~Fl~~L~gv~DPE~KRkiIG~~-Fi~vf~~~a~~~-~~~~-~L~QGTlypDvIES~~~~~~~~~~IKsHHN  355 (520)
T Consensus       238 ~l~~~~-~~~fw~~~~~~GpP~rd~RWCc~v~Kl~Pl~~~i~~~~~~~~vl~~~G~R---~~ES~~R~~--~~--~~~~~  309 (420)
T PRK08557        238 NLDTVD-GDNFWDNLEKEGIPTKDNRWCNSACKLMPLKRYLKKKYGNKKVLTIDGSR---KYESFTRAN--LD--YERKS  309 (420)
T ss_pred             CEEEEC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC---HHHHHHHHC--CC--CCCCC
T ss_conf             679965-46689887754999766725074310178999999857898759999701---454076605--87--41347


Q ss_pred             CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC
Q ss_conf             32011320320223789873899999999819998894268889831
Q gi|254780414|r  356 VGGLPEHMDMKLVEPLKELFKDEVRLLGKELRLPDSFVERHPCPGPG  402 (520)
Q Consensus       356 vgglp~~~~~~liEPl~~l~KdEVR~lg~~Lglp~~~~~RhPFPGPG  402 (520)
T Consensus       310 -~~v~~q---~~~~PI~~Wsa~~VwLYI~~~~l~~NplY~~Gf~RvG  352 (420)
T PRK08557        310 -GFIDFQ---TNVFPILDWNSLDIWSYIFSNDILYNPMYDKGFERIG  352 (420)
T ss_pred             -CCCCCC---EEEEHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCC
T ss_conf             -776665---0353153260769999999759999848866876367