HHsearch alignment for GI: 254780414 and conserved domain: PRK12564
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed.
Probab=99.97 E-value=2.4e-31 Score=244.30 Aligned_cols=176 Identities=27% Similarity=0.450 Sum_probs=137.8
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCC-CCCCCCHHHHHCCCCEE
Q ss_conf 44886999988970578899888865940698528989889972399799998538899999-99753768980899889
Q gi|254780414|r 5 ERSSKVLIIDFGSQFTQLIARRVRESKVYCEVIAFKNALDYFKEQNPQAIILSGSPASSLDI-DSPQIPKEILESNIPLL 83 (520)
Q Consensus 5 ~~~~~IlIlDfGSQytqLIaRriRelgVyseI~P~~~~~e~i~~~~p~GIILSGGP~SV~d~-~ap~~~~~I~~~~iPIL 83 (520)
T Consensus 169 ~~~~~V~viD~GvK~n--Ilr~L~~rg~~v~VvP~~~~~~~I~~~~pDGIflSNGPGDP~~~~~~i~~ik~li~~~~Pif 246 (355)
T PRK12564 169 GGGYHVVAIDFGVKRN--ILRELAERGCRVTVVPATTTAEEILALNPDGVFLSNGPGDPAALDYAIEMIKELLEGKIPIF 246 (355)
T ss_pred CCCEEEEEEECCCHHH--HHHHHHHCCCEEEEECCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 9971899993787388--99999987986999689787657641488889967999996887999999999852698789
Q ss_pred EECHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEE---ECCCHHH--CCCCCCCEEECCC-C
Q ss_conf 97789999899709699986986610366752388622278726655336860---0220110--1244421123239-8
Q gi|254780414|r 84 GICYGQQIMCQSLGGKTKNSQSREFGRAFIEIKKNCSLLKGMWEKGSKQQVWM---SHGDQVE--HIPEGFEVIASSD-S 157 (520)
Q Consensus 84 GICyG~QlLa~~~GG~V~~~~~~EyG~~~I~i~~~~~lf~gl~~~~~~~~Vwm---SH~D~V~--~lP~gf~viA~S~-~ 157 (520)
T Consensus 247 GICLGHQllalA~Ga~t~Km~fGHrG~-------NhPV~~-l----~t~~v~iTSQNHGyaVd~~sl~~~~~vt~~nlnD 314 (355)
T PRK12564 247 GICLGHQLLALALGAKTYKMKFGHRGA-------NHPVKD-L----ETGKVEITSQNHGFAVDEDSLPENLEVTHVNLND 314 (355)
T ss_pred EECHHHHHHHHHCCCEECCCCCCCCCC-------CCCCEE-C----CCCEEEEEECCCCEEECCCCCCCCEEEEEEECCC
T ss_conf 988879999997198442055565789-------977335-5----7873999716742286666589873999993899
Q ss_pred CCEEEEEECCCCEEEEEEEEHHHCCCH-HHHHHHHHHH
Q ss_conf 317889863500112465212221520-2577998755
Q gi|254780414|r 158 TPFAFIADEKRKYYAVQFHPEVVHTVG-GSQLIDNFVH 194 (520)
Q Consensus 158 ~~iaai~~~~~~iyGVQFHPEV~hT~~-G~~iL~NFl~ 194 (520)
T Consensus 315 gtvEGi~h~~~p~fSVQfHPEa~pGP~D~~~lFd~F~~ 352 (355)
T PRK12564 315 GTVEGLRHKDLPAFSVQYHPEASPGPHDAAYLFDEFVE 352 (355)
T ss_pred CCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 96721788899878972188999899753889999999