HHsearch alignment for GI: 254780414 and conserved domain: TIGR00032
>TIGR00032 argG argininosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6.3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate , . In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process.
Probab=97.29 E-value=0.0013 Score=46.07 Aligned_cols=157 Identities=22% Similarity=0.343 Sum_probs=108.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHH-----HHC---
Q ss_conf 0366405640477999999862236-5699997389551562789999886236985799758899999-----966---
Q gi|254780414|r 224 RVICAVSGGVDSTVAAFLIYEAIGI-NLTCVLVDHGFMRKNEVENIISLFKGYPNFPLRVVDASERFIR-----KLK--- 294 (520)
Q Consensus 224 kVi~~lSGGVDStV~A~Ll~kAig~-~l~~vfVD~GllRknE~~~v~~~~~~~~~~~l~~vda~~~Fl~-----~L~--- 294 (520)
T Consensus 1 KVvLAySGGLDTSv~l~wL~~kyG~~~Via~~~dvGQPDE~d~~~~~~kA~~~GA~~~~~iDak~eFv~dy~f~aiqanA 80 (420)
T TIGR00032 1 KVVLAYSGGLDTSVCLKWLEEKYGYEEVIAVTADVGQPDEEDIDAIEEKALKYGAEKHYTIDAKEEFVKDYLFAAIQANA 80 (420)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCC
T ss_conf 96888607025999999988652898607999756799988888899998873671025772368899999888765066
Q ss_pred ------CCCC---HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCC
Q ss_conf ------8988---8999988756589999999974399709986462202454202467776303443023201132032
Q gi|254780414|r 295 ------NIVD---PETKRKVIGQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDM 365 (520)
Q Consensus 295 ------gv~D---PE~KRkiIG~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~ 365 (520)
T Consensus 81 ~Ye~~GG~~Y~L~TaLaRPlIA~~lVe~Ak~-----~Ga~AvaHGC----------TGKGN-DQ~RF--e~~~~~~~p~L 142 (420)
T TIGR00032 81 VYEGTGGLVYPLSTALARPLIAKKLVEVAKK-----EGAEAVAHGC----------TGKGN-DQVRF--ERSIRALNPDL 142 (420)
T ss_pred EECCCCCEECCCCCCCHHHHHHHHHHHHHHH-----CCCEEEECCC----------CCCCC-CHHHH--HHHHHHHCCCC
T ss_conf 0317874103476611457999999999846-----6954987076----------87774-13576--58887526898
Q ss_pred CHHHHHHH--HH-----HHHHHHHHHHHCCCHHHHCCCCC
Q ss_conf 02237898--73-----89999999981999889426888
Q gi|254780414|r 366 KLVEPLKE--LF-----KDEVRLLGKELRLPDSFVERHPC 398 (520)
Q Consensus 366 ~liEPl~~--l~-----KdEVR~lg~~Lglp~~~~~RhPF 398 (520)
T Consensus 143 kviaP~R~~~~~e~lgGR~e~~eYa~~~Gip~p~~~~K~Y 182 (420)
T TIGR00032 143 KVIAPWRDLNLTEELGGREEEIEYAAQKGIPVPMTKEKPY 182 (420)
T ss_pred EEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 5874734646776405948899999966888765467777