HHsearch alignment for GI: 254780414 and conserved domain: TIGR00268

>TIGR00268 TIGR00268 conserved hypothetical protein TIGR00268; InterPro: IPR005232 This family of conserved hypothetical proteins has no known function but is predicted to be part of the wider PP-loop superfamily ..
Probab=99.25  E-value=1.9e-09  Score=87.80  Aligned_cols=224  Identities=24%  Similarity=0.295  Sum_probs=152.3

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECC-CCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf             99999976504440366405640477999999862236569999738-95515627899998862369857997588999
Q gi|254780414|r  211 EIVSRIKEQVGNERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDH-GFMRKNEVENIISLFKGYPNFPLRVVDASERF  289 (520)
Q Consensus       211 ~~i~~Ir~~vg~~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~-GllRknE~~~v~~~~~~~~~~~l~~vda~~~F  289 (520)
T Consensus         4 ~L~~fl~~kf~nk~~~IAySGGvDS~lla~v~~~v~g~~~lait~~sP~~sp~~el~~A~~~A~~-~g~~he~~~~d~~~   82 (263)
T TIGR00268         4 NLRNFLKEKFKNKKVLIAYSGGVDSSLLAAVCSDVAGTEVLAITVVSPSISPRRELEDAKAIAKE-IGVKHELVKIDKMA   82 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHH-HCCCEEEECCCCCC
T ss_conf             88889876764081699951746589999999875310113578762775735448999999988-08301211001236


Q ss_pred             HHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHH
Q ss_conf             99966898-88999988756589999999974399709986462202454202467776303443023201132032022
Q gi|254780414|r  290 IRKLKNIV-DPETKRKVIGQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLV  368 (520)
Q Consensus       290 l~~L~gv~-DPE~KRkiIG~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~li  368 (520)
T Consensus        83 n~---~f~~N~~~RCY~CK~~~~~~L~~~a~~~-gy~~V~dGtN~dDL~~~RP--G--------------~~A~~E~~g~  142 (263)
T TIGR00268        83 NP---NFRANVEERCYFCKKKVLSILVKLAEKR-GYDVVVDGTNADDLEDHRP--G--------------LRAVKELNGV  142 (263)
T ss_pred             CC---CCCCCCCCCCHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCC--H--------------HHHHHHCCCC
T ss_conf             85---0016885444154888999989999863-9957982346200023675--1--------------3567660788


Q ss_pred             -HHHHHH--HHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEC--CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             -378987--3899999999819998894268889831112210--00367899999999999999998646533322010
Q gi|254780414|r  369 -EPLKEL--FKDEVRLLGKELRLPDSFVERHPCPGPGLAIRCI--GEITEERINILRESDAIYREEIHKAGIYRKIWQAF  443 (520)
Q Consensus       369 -EPl~~l--~KdEVR~lg~~Lglp~~~~~RhPFPGPGLaiRi~--g~vt~e~~~i~r~ad~i~~~~l~~~~ly~~~~q~~  443 (520)
T Consensus       143 ~SP~aef~I~K~eir~ia~~lg~~~---~DKP~-~~CL~sR~p~g~EI~~ekL~~v~eaE~~~l~~--------------  204 (263)
T TIGR00268       143 YSPWAEFGITKKEIREIAKSLGLSF---YDKPS-EACLASRFPFGEEIDVEKLKKVDEAEEIVLRR--------------  204 (263)
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCC---CCCCC-CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH--------------
T ss_conf             6872002568799999999748898---88866-21021047687510489877699999999998--------------


Q ss_pred             EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             455686324215998541447999632168775587101898999987557
Q gi|254780414|r  444 TVLLPVQTVGVMGDERTYEYVCSLRAVTSIDGMTADFYHHDMNFLSQVAIR  494 (520)
Q Consensus       444 avllp~~svGv~GD~R~y~~~~~lr~v~s~d~mta~~~~~~~~~l~~is~~  494 (520)
T Consensus       205 ---~g~~qvRV----R~y~nlAvi--------------E~~~~~l~kl~~~  234 (263)
T TIGR00268       205 ---AGVKQVRV----RNYDNLAVI--------------EVAEDELSKLLNE  234 (263)
T ss_pred             ---HCCCCEEE----ECCCCEEEE--------------EECHHHHHHHHHH
T ss_conf             ---35660576----526765799--------------6285889999863