HHsearch alignment for GI: 254780414 and conserved domain: TIGR01823

Probab=99.86  E-value=8.1e-21  Score=168.99  Aligned_cols=193  Identities=20%  Similarity=0.277  Sum_probs=142.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHH---HCC-----CEEEEECCCCCH--HHHHHC--CCCEEEECCCCCCCCC-CCCCCCC
Q ss_conf             48869999889705788998888---659-----406985289898--899723--9979999853889999-9997537
Q gi|254780414|r    6 RSSKVLIIDFGSQFTQLIARRVR---ESK-----VYCEVIAFKNAL--DYFKEQ--NPQAIILSGSPASSLD-IDSPQIP   72 (520)
Q Consensus         6 ~~~~IlIlDfGSQytqLIaRriR---elg-----VyseI~P~~~~~--e~i~~~--~p~GIILSGGP~SV~d-~~ap~~~   72 (520)
T Consensus         4 ~rl~vL~ID~YDSftyNvv~lle~~~d~~PGvnav~V~tvhsD~~~sm~~l~e~l~~FdAiVvGPGPG~PN~GA~d~gI~   83 (851)
T TIGR01823         4 ARLQVLFIDAYDSFTYNVVALLEKALDVRPGVNAVSVITVHSDKFDSMDDLLELLLLFDAIVVGPGPGDPNVGAKDVGIL   83 (851)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHH
T ss_conf             31441578701101689999999874158774468999970687235346888874178589888776776511444688


Q ss_pred             HHHHHCC------CCEEEECHHHHHHHHHCCCEEEECC-CCCCCEEEEEECCCCCCCCCCCC-CCCCEEEEEECCCHHHC
Q ss_conf             6898089------9889977899998997096999869-86610366752388622278726-65533686002201101
Q gi|254780414|r   73 KEILESN------IPLLGICYGQQIMCQSLGGKTKNSQ-SREFGRAFIEIKKNCSLLKGMWE-KGSKQQVWMSHGDQVEH  144 (520)
Q Consensus        73 ~~I~~~~------iPILGICyG~QlLa~~~GG~V~~~~-~~EyG~~~I~i~~~~~lf~gl~~-~~~~~~VwmSH~D~V~~  144 (520)
T Consensus        84 ~~~w~l~~Gk~D~~Pv~GICLGFQslcL~qGa~i~rlpn~p~HGqV~~~~t~~~~if~g~~~GyPdtvk~trYHSLyan~  163 (851)
T TIGR01823        84 REVWELANGKLDEVPVLGICLGFQSLCLYQGADIERLPNLPLHGQVYEVKTSDAAIFEGVSSGYPDTVKSTRYHSLYANK  163 (851)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCEEEEEEEEEEECC
T ss_conf             99997328953135511001568999985588235617886574378887401155524114788632244557887317


Q ss_pred             CCCCC------------------------CEEECCCC-CCEEEEEECCCCEEEEEEEEHHHCCCHH--HHHHHHHHHHHC
Q ss_conf             24442------------------------11232398-3178898635001124652122215202--577998755010
Q gi|254780414|r  145 IPEGF------------------------EVIASSDS-TPFAFIADEKRKYYAVQFHPEVVHTVGG--SQLIDNFVHHVA  197 (520)
Q Consensus       145 lP~gf------------------------~viA~S~~-~~iaai~~~~~~iyGVQFHPEV~hT~~G--~~iL~NFl~~Ic  197 (520)
T Consensus       164 ~~id~strGvdsGnPqadrfaskdldLL~~~l~ed~e~~i~Ms~~~~k~P~fGv~yHPESc~S~~~a~~kl~~nfl-~la  242 (851)
T TIGR01823       164 ESIDSSTRGVDSGNPQADRFASKDLDLLALILLEDEEDQILMSVKAKKKPIFGVQYHPESCKSEKEASVKLLKNFL-KLA  242 (851)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH-HHH
T ss_conf             8865332555678850123343236789988622688812200310588774565056433455457899999999-874


Q ss_pred             CC
Q ss_conf             64
Q gi|254780414|r  198 GI  199 (520)
Q Consensus       198 ~~  199 (520)
T Consensus       243 ~~  244 (851)
T TIGR01823       243 LI  244 (851)
T ss_pred             HC
T ss_conf             01