HHsearch alignment for GI: 254780414 and conserved domain: TIGR02039
>TIGR02039 CysD sulfate adenylyltransferase, small subunit; InterPro: IPR011784 Metabolic assimilation of sulphur from inorganic sulphate, requires sulphate activation by coupling to a nucleoside, for the production of high-energy nucleoside phosphosulphates. This pathway appears to be similar in all prokaryotic organisms. Activation is first achieved through reaction of sulphate with ATP by sulphate adenylyltransferase (ATP sulphurylase) to produce 5'-phosphosulphate (APS), coupled by GTP hydrolysis. Subsequently, APS is phosphorylated by an APS kinase to produce 3'-phosphoadenosine-5'-phosphosulphate (PAPS). In Escherichia coli, ATP sulphurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulphur-containing amino acids. Homologous to this E. coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulphurase and APS kinase activity, yet are involved in Nod factor sulphation, and sulphation of other macromolecules.; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0019421 sulfate reduction APS pathway.
Probab=94.59 E-value=0.32 Score=28.99 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHCC-CCEEEEECCCCHHHHHHHHHHHHCC--C-CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEE
Q ss_conf 7899999999765044-4036640564047799999986223--6-5699997389551562789999886236985799
Q gi|254780414|r 207 SYHKEIVSRIKEQVGN-ERVICAVSGGVDSTVAAFLIYEAIG--I-NLTCVLVDHGFMRKNEVENIISLFKGYPNFPLRV 282 (520)
Q Consensus 207 ~~~~~~i~~Ir~~vg~-~kVi~~lSGGVDStV~A~Ll~kAig--~-~l~~vfVD~GllRknE~~~v~~~~~~~~~~~l~~ 282 (520)
T Consensus 3 ~LE~EaI~i~REvaa~F~~PV~LyS~GKDS~VlLHLA~KaF~Pg~~PFplLHvDTgw-~f~E~~~fRD~~~~~~~~~L~v 81 (295)
T TIGR02039 3 LLEAEAIHIIREVAAEFERPVLLYSIGKDSSVLLHLARKAFYPGRLPFPLLHVDTGW-KFREMIAFRDELVAKYGLELIV 81 (295)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCC-CHHHHHHHHHHHHHHHCCEEEE
T ss_conf 015788999998763037976898657347999998764058888797357740663-2789999999999870976888
Q ss_pred EEHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCC--H
Q ss_conf 7588999999668988899-998875658999999997439970998646220245420246777630344302320--1
Q gi|254780414|r 283 VDASERFIRKLKNIVDPET-KRKVIGQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGG--L 359 (520)
Q Consensus 283 vda~~~Fl~~L~gv~DPE~-KRkiIG~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgg--l 359 (520)
T Consensus 82 ~~~~~~~~~g~~P~~~~~~~~~~~~~T~~---L~~Al~~~-~FD-Aa~gGARRdEE~sRa-----KERifS~R~~~h~WD 151 (295)
T TIGR02039 82 HSNEEGIAEGINPFTEGSALHTDIMKTEA---LRQALDKN-QFD-AAFGGARRDEEKSRA-----KERIFSFRDAFHQWD 151 (295)
T ss_pred EECHHHHHHCCCCCHHHHHHHHHHHHHHH---HHHHHHHC-CCC-EEECCCCCHHHHCCC-----CCCEEHHCCCCCCCC
T ss_conf 50502354156620101245555563189---99998733-886-563166313443012-----010001003457888
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH---
Q ss_conf 13203202237898738999999998199988942688898311122100036789999999999999999864653---
Q gi|254780414|r 360 PEHMDMKLVEPLKELFKDEVRLLGKELRLPDSFVERHPCPGPGLAIRCIGEITEERINILRESDAIYREEIHKAGIY--- 436 (520)
Q Consensus 360 p~~~~~~liEPl~~l~KdEVR~lg~~Lglp~~~~~RhPFPGPGLaiRi~g~vt~e~~~i~r~ad~i~~~~l~~~~ly--- 436 (520)
T Consensus 152 Pk~QR------------------------PELW~~YNg~~~~GE~~RvFPLSNwTE~DiW~---Y~~~~~i~~~~lYfA~ 204 (295)
T TIGR02039 152 PKKQR------------------------PELWNLYNGRISKGESVRVFPLSNWTELDIWR---YIAAENIEIVPLYFAA 204 (295)
T ss_pred CCCCC------------------------HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHH---HHHHCCCCCCEEECCC
T ss_conf 51257------------------------37787505234688726872266650445898---8743465422011024
Q ss_pred -HHHHHHHEE--ECCCCCCCCCCCCCCCCCEEEEEEE---ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf -332201045--5686324215998541447999632---168775587101898999987557504879812578
Q gi|254780414|r 437 -RKIWQAFTV--LLPVQTVGVMGDERTYEYVCSLRAV---TSIDGMTADFYHHDMNFLSQVAIRIVNEVKGINRVV 506 (520)
Q Consensus 437 -~~~~q~~av--llp~~svGv~GD~R~y~~~~~lr~v---~s~d~mta~~~~~~~~~l~~is~~i~n~v~~v~rV~ 506 (520)
T Consensus 205 ~RpV~~R~g~l~~~~D~~~~~~~~E~~~~~~vrfRTlGc~~~tga~~S~A~~~-~~ii~E~~~~~~sE-Rg~~R~~ 278 (295)
T TIGR02039 205 KRPVVERDGMLIMVDDERLELEPGEVVKERMVRFRTLGCYPLTGAIESDAATV-EEIIAEVAVARTSE-RGQGRAI 278 (295)
T ss_pred CCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH-HHHHHHHHHHHHCC-CCCCCCC
T ss_conf 68624107448886065246677751000045555405756454312234107-99999988753202-5452332