HHsearch alignment for GI: 254780414 and conserved domain: cd03128
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain. Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamin
Probab=97.00 E-value=0.0013 Score=46.11 Aligned_cols=72 Identities=22% Similarity=0.396 Sum_probs=48.8
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHH--HHHCCCCEEEECCCCCCCCCCC-CCC---CCHHHHHCCCCEEEECHHHHHH
Q ss_conf 8899888865940698528989889--9723997999985388999999-975---3768980899889977899998
Q gi|254780414|r 21 QLIARRVRESKVYCEVIAFKNALDY--FKEQNPQAIILSGSPASSLDID-SPQ---IPKEILESNIPLLGICYGQQIM 92 (520)
Q Consensus 21 qLIaRriRelgVyseI~P~~~~~e~--i~~~~p~GIILSGGP~SV~d~~-ap~---~~~~I~~~~iPILGICyG~QlL 92 (520)
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vii~gg~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~c~G~~~l 92 (92)
T cd03128 15 ASPLDALREAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPDDLAWDEALLALLREAAAAGKPVLGICLGAQLL 92 (92)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCEEEECCCCCCCCCCHHCHHHHHHHHHHHHCCCEEEEECCHHHHC
T ss_conf 999999997799799995389964453686458899978998664210109899999999998799799999047539