HHsearch alignment for GI: 254780414 and conserved domain: pfam02568
>pfam02568 ThiI Thiamine biosynthesis protein (ThiI). ThiI is required for thiazole synthesis, required for thiamine biosynthesis.
Probab=99.25 E-value=1.5e-10 Score=95.67 Aligned_cols=156 Identities=24% Similarity=0.306 Sum_probs=111.8
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH----HHHHC---CCCCEEEEEHHHHHHHHHC
Q ss_conf 4403664056404779999998622365699997389551562789999----88623---6985799758899999966
Q gi|254780414|r 222 NERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNEVENIIS----LFKGY---PNFPLRVVDASERFIRKLK 294 (520)
Q Consensus 222 ~~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE~~~v~~----~~~~~---~~~~l~~vda~~~Fl~~L~ 294 (520)
T Consensus 3 ~gk~l~LlSGGiDSpVAa~lmmkR-G~~V~~vhf~~~p~~~~~~~~k~~~l~~~l~~y~~~~~~~l~vv~~~~~~~~i~~ 81 (197)
T pfam02568 3 QGKVLALLSGGIDSPVAAYLMMRR-GCRVVALHFINEPGTSEEAIEKVRKLAELLAEYGTSCEGKLVVVDFTKVQKEIIE 81 (197)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 771898866871299999999987-9979999987999998999999999999999737887544999574999999996
Q ss_pred CCCCHHHHHHHHHHHHH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHH
Q ss_conf 89888999988756589-99999997439970998646220245420246777630344302320113203202237898
Q gi|254780414|r 295 NIVDPETKRKVIGQLFI-EVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLKE 373 (520)
Q Consensus 295 gv~DPE~KRkiIG~~Fi-~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~~ 373 (520)
T Consensus 82 ~~~~~~--~cv~cKr~M~r~A~~iA~~~-ga~~IVTG-------EsLGQVa--SQTl~---nl~~i~~~~~~pilRPLig 146 (197)
T pfam02568 82 KAPEKY--RCVLCKRCMYRAAEKVAEEE-GADALVTG-------ESLGQVA--SQTLD---NLRVISAATNLPILRPLIG 146 (197)
T ss_pred CCCCCC--EEHHHHHHHHHHHHHHHHHC-CCCEEEEC-------CCHHHHH--HCCCC---HHHHHHHHHCCCCCCCCCC
T ss_conf 289876--54569999999999999984-99899847-------3031210--04531---0699987624853134346
Q ss_pred HHHHHHHHHHHHHCCCHHHH
Q ss_conf 73899999999819998894
Q gi|254780414|r 374 LFKDEVRLLGKELRLPDSFV 393 (520)
Q Consensus 374 l~KdEVR~lg~~Lglp~~~~ 393 (520)
T Consensus 147 ~DK~EIi~~Ar~IGt~~~s~ 166 (197)
T pfam02568 147 LDKEEIINLAKEIGTYEISI 166 (197)
T ss_pred CCHHHHHHHHHHHCCHHHHC
T ss_conf 99999999999948677662