HHsearch alignment for GI: 254780416 and conserved domain: CHL00014
>CHL00014 ndhI NADH dehydrogenase subunit I.
Probab=99.18 E-value=4.3e-12 Score=84.75 Aligned_cols=63 Identities=30% Similarity=0.571 Sum_probs=49.2
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCC-----------CEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 67747220897997526747774311467-----------447994013025771587874200256676346899
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE-----------NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~-----------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~~~~~~ 66 (113)
T Consensus 57 i~~~~dkCI~C--~~C~~vCP~~~i~Vd~~~~~~~~kK~~~~y~ID~grCIFCG~CvEaCPtdAI~mT~EyEla~y 130 (173)
T CHL00014 57 IHFEFDKCIAC--EVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTY 130 (173)
T ss_pred EECCCCCCCCH--HHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 00584117244--369865977761633556788885011467756162130367110178680335675546667