HHsearch alignment for GI: 254780416 and conserved domain: CHL00014
>CHL00014 ndhI NADH dehydrogenase subunit I.
Probab=97.55 E-value=2.2e-05 Score=48.56 Aligned_cols=31 Identities=32% Similarity=0.629 Sum_probs=26.9
Q ss_pred CEEEEEHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 4479940130257715878742002566763
Q gi|254780416|r 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 31 ~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
T Consensus 55 Gri~~~~dkCI~C~~C~~vCP~~~i~Vd~~~ 85 (173)
T CHL00014 55 GRIHFEFDKCIACEVCVRVCPIDLPVVDWKL 85 (173)
T ss_pred CEEECCCCCCCCHHHHHHHCCCCCEEECCCC
T ss_conf 7000584117244369865977761633556