HHsearch alignment for GI: 254780416 and conserved domain: COG1139
>COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].
Probab=97.12 E-value=6.7e-05 Score=45.96 Aligned_cols=45 Identities=38% Similarity=0.873 Sum_probs=32.7
Q ss_pred HCCCCCCCCHHHHCCCCC---------CCCCCCEEEE------------EHHHCCCCCHHHHHHHHHH
Q ss_conf 208979975267477743---------1146744799------------4013025771587874200
Q gi|254780416|r 8 NCILCKHTDCVEVCPVDC---------FYEGENFLAI------------HPDECIDCGVCEPECPVDA 54 (113)
Q Consensus 8 ~C~~C~~~~Cv~~CP~~a---------i~~~~~~~~i------------d~~~Ci~Cg~C~~~CP~~A 54 (113)
T Consensus 309 ~CIRC--GaC~n~CPvY~~iGgh~y~~~Y~GPiG~v~s~~~~g~~~~~~~~~~c~lcg~C~evCPv~I 374 (459)
T COG1139 309 RCIRC--GACLNHCPVYRHIGGHAYGSIYPGPIGVVWSPILGGYDAAGDLPYACSLCGACTEVCPVKI 374 (459)
T ss_pred HHHCC--HHHHHCCHHHHHCCCEECCCCCCCCCCEEEEHHHCCHHHCCCCCHHHHHCCCCCCCCCCCC
T ss_conf 76000--0765138156653672025746886422630000443323462124433157777688889