HHsearch alignment for GI: 254780416 and conserved domain: COG2878

>COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion].
Probab=96.57  E-value=0.0007  Score=40.44  Aligned_cols=41  Identities=32%  Similarity=0.577  Sum_probs=30.5

Q ss_pred             EEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             479940130257715878742002566763468999999999986
Q gi|254780416|r   32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ   76 (113)
Q Consensus        32 ~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~~~~~~~~~n~~~a~~   76 (113)
T Consensus       109 va~i~e~~ciGCtkCiqaCpvdAivg~~----~~mhtv~~dlCTG  149 (198)
T COG2878         109 VALIDEANCIGCTKCIQACPVDAIVGAT----KAMHTVIADLCTG  149 (198)
T ss_pred             EEEECCHHCCCCHHHHHHCCHHHHHCCC----HHHHHHHHHHHCC
T ss_conf             4675122014439899849714431253----2578989988467