HHsearch alignment for GI: 254780416 and conserved domain: PRK05888

Probab=99.31  E-value=9.2e-13  Score=88.33  Aligned_cols=70  Identities=29%  Similarity=0.624  Sum_probs=51.1

Q ss_pred             CHHCCCCCCCCHHHHCCCCCCCCCC----------CEEEEEHHHCCCCCHHHHHHHHHHCCCCCC-----CCHHHHHHHH
Q ss_conf             7220897997526747774311467----------447994013025771587874200256676-----3468999999
Q gi|254780416|r    6 TENCILCKHTDCVEVCPVDCFYEGE----------NFLAIHPDECIDCGVCEPECPVDAIKPDTE-----PGLELWLKIN   70 (113)
Q Consensus         6 ~~~C~~C~~~~Cv~~CP~~ai~~~~----------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~-----~~~~~~~~~n   70 (113)
T Consensus        57 ~ekCi~C--~lC~~~CP~~~I~i~~~~~~~g~k~~~~~~Id~~rCifCGlCve~CP~~AI~~t~~~E~a~~~R~~liy~k  134 (172)
T PRK05888         57 EERCIAC--KLCEAICPANAITIEAAEREDGRRRTTRYDINFGRCIFCGFCEEACPTDAIVETPDFELAEETREDLIYTK  134 (172)
T ss_pred             CEECCCC--CCHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH
T ss_conf             7403577--65565588776789875089985774577753460578888221088872447886324768888936699


Q ss_pred             HHHHHHC
Q ss_conf             9999868
Q gi|254780416|r   71 SEYATQW   77 (113)
Q Consensus        71 ~~~a~~~   77 (113)
T Consensus       135 ~~Ll~~~  141 (172)
T PRK05888        135 EKLLANY  141 (172)
T ss_pred             HHHHCCC
T ss_conf             9972230