HHsearch alignment for GI: 254780416 and conserved domain: PRK05888

>PRK05888 NADH dehydrogenase subunit I; Provisional.
Probab=97.26  E-value=8.7e-05  Score=45.34  Aligned_cols=24  Identities=38%  Similarity=0.989  Sum_probs=20.8

Q ss_pred             HHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             130257715878742002566763
Q gi|254780416|r   38 DECIDCGVCEPECPVDAIKPDTEP   61 (113)
Q Consensus        38 ~~Ci~Cg~C~~~CP~~AI~~d~~~   61 (113)
T Consensus        58 ekCi~C~lC~~~CP~~~I~i~~~~   81 (172)
T PRK05888         58 ERCIACKLCEAICPANAITIEAAE   81 (172)
T ss_pred             EECCCCCCHHHHCCCCCCEEEEEC
T ss_conf             403577655655887767898750