HHsearch alignment for GI: 254780416 and conserved domain: PRK09477
>PRK09477 napH quinol dehydrogenase membrane component; Provisional.
Probab=98.79 E-value=1.3e-09 Score=71.39 Aligned_cols=52 Identities=27% Similarity=0.655 Sum_probs=40.4
Q ss_pred ECHHCCCCCCCCHHHHCCCCCCCC-----CCCEEEEEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 472208979975267477743114-----674479940130257715878742002566
Q gi|254780416|r 5 VTENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 5 v~~~C~~C~~~~Cv~~CP~~ai~~-----~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
T Consensus 222 ~~~~C~~C--~~C~~VCP~~~vir~~l~~~~~~~~v~~~eCI~CG~CIDvC~~~al~f~ 278 (287)
T PRK09477 222 DREKCTRC--MDCFHVCPEPQVLRPPLKGKQSSPQVLSGDCTTCGRCIDVCSEDVFNFT 278 (287)
T ss_pred CCCCCCCC--CHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 88758092--3576757995424444314444688488310536599967181551544