HHsearch alignment for GI: 254780416 and conserved domain: TIGR00402
>TIGR00402 napF ferredoxin-type protein NapF; InterPro: IPR004496 Members of this family are the ferredoxin-type protein subunits of nitrate reductase. These NapF proteins are involved in electron transfer, and contain iron-sulphur centres similar to those of bacterial-type 4FE-4S ferredoxins.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0006118 electron transport.
Probab=98.11 E-value=1.5e-06 Score=54.78 Aligned_cols=57 Identities=25% Similarity=0.719 Sum_probs=48.3
Q ss_pred HHCCCCCCCCHHHHCCCCCCCCCCC-E--EEEEHHHCCCCCHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 2208979975267477743114674-4--799401302577158787420025667634689
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCFYEGEN-F--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai~~~~~-~--~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~~~~~ 65 (113)
T Consensus 39 a~CtrC--g~C~saCennil~~g~~G~p~v~fdn~eC~fCgkCa~aCp~~~f~Pr~~~~w~l 98 (161)
T TIGR00402 39 ARCTRC--GECLSACENNILQKGDAGYPEVEFDNAECDFCGKCAEACPESLFYPRFTRDWDL 98 (161)
T ss_pred EEECCC--CCHHHHCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCC
T ss_conf 631884--340301784506516788506887568767221226428755578888886212