HHsearch alignment for GI: 254780416 and conserved domain: TIGR02494

>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family; InterPro: IPR012839 This subset of the radical-SAM domain includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centred radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4 from EC, IPR012838 from INTERPRO) and the anaerobic ribonucleotide reductase activating enzyme (IPR012837 from INTERPRO). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in Escherichia coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterisation and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain, which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines..
Probab=98.72  E-value=3.6e-09  Score=68.98  Aligned_cols=83  Identities=27%  Similarity=0.567  Sum_probs=56.0

Q ss_pred             EEECHHCCCCCCCCHHHHCCCC---------CCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCC----CCHHHHHHH
Q ss_conf             7747220897997526747774---------311467447994013025771587874200256676----346899999
Q gi|254780416|r    3 YVVTENCILCKHTDCVEVCPVD---------CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE----PGLELWLKI   69 (113)
Q Consensus         3 yvv~~~C~~C~~~~Cv~~CP~~---------ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~----~~~~~~~~~   69 (113)
T Consensus        44 ~f~~~~C~~C--~~C~~~C~~~IHTkta~~~~~~~~~~~~~~~~~~c~~Cg~C~~~Cp~~Al~~~G~~~tV~ev~~~~~~  121 (305)
T TIGR02494        44 LFKENRCLGC--GKCVEVCPAGIHTKTARLVERLDGRNIISIRREKCTGCGKCTEACPSGALEIVGKEMTVEEVMRVVLR  121 (305)
T ss_pred             EEECCCCCCC--CHHHHHCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCHHHHEECCCCCHHHHHHHHHH
T ss_conf             4200234430--01454324542332067787641786010000177411101103840064202451488999999986


Q ss_pred             HHHHHHH-CCCCCCCC-CCC
Q ss_conf             9999986-88722156-878
Q gi|254780416|r   70 NSEYATQ-WPNITTKK-ESL   87 (113)
Q Consensus        70 n~~~a~~-~p~I~~k~-~pl   87 (113)
T Consensus       122 D~~fY~~SGGGvTlSGGEPl  141 (305)
T TIGR02494       122 DSIFYRNSGGGVTLSGGEPL  141 (305)
T ss_pred             HHHHHHHCCCEEEECCCCCC
T ss_conf             55666513990673487114