HHsearch alignment for GI: 254780416 and conserved domain: TIGR02745
>TIGR02745 ccoG_rdxA_fixG cytochrome c oxidase accessory protein CcoG; InterPro: IPR014116 Member of this ferredoxin-like protein family, include FixG, CcoG and RdxA,. They are found exclusively in species with an operon encoding the cbb3 type of cytochrome c oxidase (cco-cbb3), and near the cco-cbb3 operon in about half the cases. The cco-cbb3 is found in a variety of proteobacteria and almost nowhere else; it is associated with oxygen use under microaerobic conditions. Some (but not all) of these proteobacteria are also nitrogen-fixing, hence the gene symbol fixG. FixG was shown essential for functional cco-cbb3 expression in Bradyrhizobium japonicum..
Probab=94.67 E-value=0.0068 Score=35.15 Aligned_cols=18 Identities=33% Similarity=1.099 Sum_probs=15.8
Q ss_pred HHHCCCCCHHHHHHHHHH
Q ss_conf 013025771587874200
Q gi|254780416|r 37 PDECIDCGVCEPECPVDA 54 (113)
Q Consensus 37 ~~~Ci~Cg~C~~~CP~~A 54 (113)
T Consensus 242 ~GDCvdC~~CV~VCPTGI 259 (474)
T TIGR02745 242 LGDCVDCNLCVQVCPTGI 259 (474)
T ss_pred CCCCCCCCCCCCCCCCCE
T ss_conf 786247765542425720