RPSBLAST alignment for GI: 254780416 and conserved domain: TIGR01944
>gnl|CDD|162616 TIGR01944, rnfB, electron transport complex, RnfABCDGE type, B subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the B subunit. Length = 165
Score = 44.0 bits (104), Expect = 8e-06
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56
+ +NCI C T C++ CPVD + + DEC C +C CP D I+
Sbjct: 109 LIDEDNCIGC--TKCIQACPVDAIVGAAKAMHTVIADECTGCDLCVEPCPTDCIE 161