HHsearch alignment of GI: 254780417 and MMDB domain: 2eyq_A_460-544

>2eyq_A (A:460-544) TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli}

Probab=99.50  E-value=3e-14  Score=111.49  Aligned_cols=66  Identities=21%  Similarity=0.321  Sum_probs=58.9

Q ss_pred             HHHHCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEECCCCCCEEEEECCCHHHCCCCCCCCCH
Q ss_conf             4531389986974878509997678986487302530220248885699805201210454334410
Q gi|254780417|r   10 MRQGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDKDKMCLKVPVGKAIDIGMRKLSEAH   76 (188)
Q Consensus        10 ~~~~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~~~~~~~~l~vPv~~~~~~~~R~~~~~~   76 (188)
                      ...+|++||+|||++||||+|.||++++++|..++||+|+|. +++++|||+++.+.+..+...+..
T Consensus        17 d~~~l~~GD~VVh~~hGig~~~gi~~~~~~g~~~ey~~l~y~-~~~~l~VPv~~~~~i~ry~~~~~~   82 (85)
T 2eyq_A           17 NLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYA-NDAKLYVPVSSLHLISRYAGGAEE   82 (85)
T ss_dssp             TCTTCCTTCEEEETTTEEEEEEEEEEEESSSCEEEEEEEECG-GGCEEEEEGGGGGGEEECCCSCSS
T ss_pred             CHHHCCCCCEEEEECCCHHHHCCEEEEECCCCCCCCEEEEEC-CCCEEEECHHHHHHHHHHHCCCCC
T ss_conf             043246774686601230101030553026776763035642-796498348999888875024667