Query gi|254780417|ref|YP_003064830.1| transcriptional regulator CarD family protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 188
No_of_seqs 115 out of 1553
Neff 7.7
Searched_HMMs 13730
Date Wed Jun 1 03:48:44 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780417.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2eyqa1 b.34.18.1 (A:466-545) 99.2 4.4E-12 3.2E-16 95.1 6.0 62 12-74 10-71 (80)
2 d2eyqa3 c.37.1.19 (A:546-778) 92.7 0.074 5.4E-06 29.3 4.5 75 94-175 3-77 (233)
3 d1gm5a3 c.37.1.19 (A:286-549) 71.7 1.5 0.00011 20.9 3.1 33 144-176 74-106 (264)
4 d2vv5a1 b.38.1.3 (A:113-179) M 55.8 5.7 0.00041 17.2 4.7 42 11-62 15-56 (67)
5 d1we3o_ b.35.1.1 (O:) Chaperon 49.1 5.3 0.00038 17.4 2.5 29 13-49 59-87 (96)
6 d1x6oa1 b.34.5.2 (A:19-86) Euk 44.3 8 0.00058 16.2 2.9 54 8-62 4-61 (68)
7 d2cp6a1 b.34.10.1 (A:8-167) Re 40.9 9.2 0.00067 15.8 2.7 51 11-64 29-98 (160)
8 d1p3ha_ b.35.1.1 (A:) Chaperon 33.3 11 0.00081 15.3 2.2 29 13-49 61-89 (99)
9 d1k92a2 d.210.1.1 (A:189-444) 31.8 3.5 0.00026 18.5 -0.6 26 23-48 80-105 (256)
10 d1aono_ b.35.1.1 (O:) Chaperon 31.7 9.8 0.00072 15.6 1.7 29 13-49 58-87 (97)
11 d1qora1 b.35.1.2 (A:2-112,A:29 31.0 8.7 0.00064 16.0 1.3 16 12-27 76-91 (147)
12 d2f5ka1 b.34.13.3 (A:6-88) Mor 22.6 20 0.0014 13.7 3.4 52 11-63 3-56 (83)
13 d1j20a2 d.210.1.1 (A:171-395) 21.9 12 0.00091 15.0 0.7 26 23-48 77-102 (225)
14 d1vl2a2 d.210.1.1 (A:174-409) 21.8 14 0.001 14.6 1.0 26 23-48 84-109 (236)
15 d1bkba1 b.34.5.2 (A:4-74) Euka 21.7 20 0.0015 13.6 3.5 30 9-39 9-38 (71)
16 d2diga1 b.34.9.1 (A:8-62) Lami 20.8 21 0.0015 13.5 4.1 49 11-61 3-51 (55)
No 1
>d2eyqa1 b.34.18.1 (A:466-545) Transcription-repair coupling factor, RRCF, middle domain {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=4.4e-12 Score=95.07 Aligned_cols=62 Identities=23% Similarity=0.363 Sum_probs=55.7
Q ss_pred HHCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEECCCCCCEEEEECCCHHHCCCCCCCC
Q ss_conf 313899869748785099976789864873025302202488856998052012104543344
Q gi|254780417|r 12 QGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDKDKMCLKVPVGKAIDIGMRKLSE 74 (188)
Q Consensus 12 ~~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~~~~~~~~l~vPv~~~~~~~~R~~~~ 74 (188)
..+++||+|||.+||||+|.|++++++.|..+||+.|+|. +++++|||+++.+.+..+...+
T Consensus 10 ~~L~~GD~VVH~dhGIG~y~GL~~~~~~g~~~e~l~leY~-~~d~LyVPv~~~~~i~kY~g~~ 71 (80)
T d2eyqa1 10 AELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYA-NDAKLYVPVSSLHLISRYAGGA 71 (80)
T ss_dssp TTCCTTCEEEETTTEEEEEEEEEEEESSSCEEEEEEEECG-GGCEEEEEGGGGGGEEECCCSC
T ss_pred HHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEC-CCCEEEEEHHHHCCEEECCCCC
T ss_conf 7587999998802591752322785127877855999986-8995997489933033315899
No 2
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=92.74 E-value=0.074 Score=29.29 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf 55038999999985168999999999999841010000012689999999999977467748998999999999850467
Q gi|254780417|r 94 TMWSRRAQEYDAKINSGDLIAIAEVVRDLHRTDSQPEKSYSERQLYESALNRMVREIAAVNSISEPEAINLIEVNLSSKS 173 (188)
Q Consensus 94 ~~~~~R~~~~~~~lksgd~~~~a~vik~L~~~~~~k~l~~~e~~~l~~A~~~L~~Efa~~l~i~~eea~~~I~~~L~~~~ 173 (188)
..|.++.+.-++.++ .-..++++....|...+...+.-. ......+.+.|+|.++.+|..|.+.|.++|.++.
T Consensus 3 ~~W~k~K~Kakk~i~----~lA~eLL~i~akR~~~kg~~~~~~---~~~~~~~~~~lP~~lt~~Q~~~~~~i~~~~~~~~ 75 (233)
T d2eyqa3 3 DAWSRARQKAAEKVR----DVAAELLDIYAQRAAKEGFAFKHD---REQYQLFCDSFPFETTPDQAQAINAVLSDMCQPL 75 (233)
T ss_dssp SHHHHHHHHHHHHHH----HHHHHHHHHHHHHHTSCCCCCCCC---HHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCCCCCCC---HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 779999999999999----999999999999822669887998---7999766640011346048889999999985457
Q ss_pred CC
Q ss_conf 53
Q gi|254780417|r 174 SK 175 (188)
Q Consensus 174 ~~ 175 (188)
|.
T Consensus 76 ~~ 77 (233)
T d2eyqa3 76 AM 77 (233)
T ss_dssp CC
T ss_pred CC
T ss_conf 66
No 3
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=71.68 E-value=1.5 Score=20.88 Aligned_cols=33 Identities=9% Similarity=0.131 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 999977467748998999999999850467533
Q gi|254780417|r 144 NRMVREIAAVNSISEPEAINLIEVNLSSKSSKT 176 (188)
Q Consensus 144 ~~L~~Efa~~l~i~~eea~~~I~~~L~~~~~~~ 176 (188)
+.|.+.|+|.||.+|..|.+.|..+|.++.|-.
T Consensus 74 ~~f~~~LPFeLT~~Q~~ai~ei~~d~~~~~~m~ 106 (264)
T d1gm5a3 74 EEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMN 106 (264)
T ss_dssp HHHHHHSSSCCCHHHHHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 998840046678037888999998762367531
No 4
>d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]}
Probab=55.75 E-value=5.7 Score=17.15 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=27.8
Q ss_pred HHHCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEECCCCCCEEEEECC
Q ss_conf 5313899869748785099976789864873025302202488856998052
Q gi|254780417|r 11 RQGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDKDKMCLKVPVG 62 (188)
Q Consensus 11 ~~~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~~~~~~~~l~vPv~ 62 (188)
.+.|++||+|.-..+ .|+|++|. .-+-+|.-. ++..+++|=.
T Consensus 15 ~~pf~vGD~I~i~~~-~G~V~~I~--------l~~T~l~~~-dg~~i~iPN~ 56 (67)
T d2vv5a1 15 FRPFRAGEYVDLGGV-AGTVLSVQ--------IFSTTMRTA-DGKIIVIPNG 56 (67)
T ss_dssp TCSSCTTCEEESSSC-EEEEEEEC--------SSEEEEECT-TSCEEEEEHH
T ss_pred ECCCCCCCEEEECCE-EEEEEEEE--------CEEEEEECC-CCCEEEEECH
T ss_conf 078328999999998-99999995--------439999914-9989999888
No 5
>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]}
Probab=49.06 E-value=5.3 Score=17.37 Aligned_cols=29 Identities=21% Similarity=0.562 Sum_probs=19.8
Q ss_pred HCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEE
Q ss_conf 1389986974878509997678986487302530220
Q gi|254780417|r 13 GFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIA 49 (188)
Q Consensus 13 ~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~ 49 (188)
..++||+|+|+.++-.+| ++.|.. |+++.
T Consensus 59 ~vkvGD~Vl~~~~~g~~v------~~~g~~--y~ii~ 87 (96)
T d1we3o_ 59 EVKEGDIVVFAKYGGTEI------EIDGEE--YVILS 87 (96)
T ss_dssp SCCTTCEEEECTTCSEEE------ECSSCE--EEEEC
T ss_pred EEEECCEEEECCCCCCEE------EECCEE--EEEEE
T ss_conf 378489999846787389------999999--99999
No 6
>d1x6oa1 b.34.5.2 (A:19-86) Eukaryotic initiation translation factor 5a (eIF5a) {Leishmania infantum [TaxId: 5671]}
Probab=44.32 E-value=8 Score=16.20 Aligned_cols=54 Identities=6% Similarity=0.145 Sum_probs=32.0
Q ss_pred HHHHHHCCCCCEEECCCCCCEEEEEEEEEEECC---CCHHHEEEEC-CCCCCEEEEECC
Q ss_conf 334531389986974878509997678986487---3025302202-488856998052
Q gi|254780417|r 8 DAMRQGFRTGEHIVYPAHGVGTITEIKEQEVAG---MKLEFFVIAF-DKDKMCLKVPVG 62 (188)
Q Consensus 8 ~~~~~~FkvGD~VVy~~~GVg~i~~I~~~~i~g---~~~eyy~L~~-~~~~~~l~vPv~ 62 (188)
.++....+.|+|||.-.. .|+|.+|.+-.-+- .+.-+.-+-+ -+......+|..
T Consensus 4 p~~~~~lkkG~yv~i~g~-PCkI~~istSk~GKHGhaK~~i~~idIFtgkK~~~v~P~~ 61 (68)
T d1x6oa1 4 PLAAGALKKGGYVCINGR-PCKVIDLSVSKTGKHGHAKVSIVATDIFTGNRLEDQAPST 61 (68)
T ss_dssp EEEGGGCCTTCEEEETTE-EEEEEEEEECCC----CCEEEEEEEETTTCCEEEEEEETT
T ss_pred EEECCEEEECCEEEECCE-EEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCC
T ss_conf 437430138799999997-4699987534897566408999999710697889880577
No 7
>d2cp6a1 b.34.10.1 (A:8-167) Restin {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.90 E-value=9.2 Score=15.82 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=28.0
Q ss_pred HHHCCCCCEEECCCCCCEEEEEEEEEEEC-------------CC----C--HHHEEEECCCCCCEEEEECCCH
Q ss_conf 53138998697487850999767898648-------------73----0--2530220248885699805201
Q gi|254780417|r 11 RQGFRTGEHIVYPAHGVGTITEIKEQEVA-------------GM----K--LEFFVIAFDKDKMCLKVPVGKA 64 (188)
Q Consensus 11 ~~~FkvGD~VVy~~~GVg~i~~I~~~~i~-------------g~----~--~eyy~L~~~~~~~~l~vPv~~~ 64 (188)
...|++||.|.-...+.|.|.=|....|. |+ . ..|+... .+..+|||+.+.
T Consensus 29 ~~~~~vGdrV~v~g~~~G~vr~iG~~~~~~G~wvGVELd~p~GKNdGsv~G~~YF~c~---~~~G~Fv~~s~v 98 (160)
T d2cp6a1 29 ERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQ---PKYGLFAPVHKV 98 (160)
T ss_dssp SSCCCSSCEEEETTTEEEEEEEEEECSSSSSEEEEEEESSSCCSBSSEETTEECCCCC---TTTEEEEEGGGC
T ss_pred CCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEECCEEEEECC---CCCEEEECHHHC
T ss_conf 7787408988989997189998355688788789889478888778879999732359---994588457675
No 8
>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.26 E-value=11 Score=15.28 Aligned_cols=29 Identities=21% Similarity=0.533 Sum_probs=19.8
Q ss_pred HCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEE
Q ss_conf 1389986974878509997678986487302530220
Q gi|254780417|r 13 GFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIA 49 (188)
Q Consensus 13 ~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~ 49 (188)
..++||+|+|+.++-- ..++.|. +|+++.
T Consensus 61 ~vk~GD~Vl~~~~~g~------~v~~dg~--~y~ii~ 89 (99)
T d1p3ha_ 61 DVAEGDTVIYSKYGGT------EIKYNGE--EYLILS 89 (99)
T ss_dssp SCCTTCEEEEECTTCE------EEEETTE--EEEEEE
T ss_pred EEECCCEEEECCCCCE------EEEECCE--EEEEEE
T ss_conf 0144989998564860------9999999--999999
No 9
>d1k92a2 d.210.1.1 (A:189-444) Argininosuccinate synthetase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.77 E-value=3.5 Score=18.48 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=20.4
Q ss_pred CCCCCEEEEEEEEEEECCCCHHHEEE
Q ss_conf 87850999767898648730253022
Q gi|254780417|r 23 PAHGVGTITEIKEQEVAGMKLEFFVI 48 (188)
Q Consensus 23 ~~~GVg~i~~I~~~~i~g~~~eyy~L 48 (188)
+.|||||+.-++++-++=+.+.+|.-
T Consensus 80 G~hGIGRiD~vEnR~vGiKSRgvYEa 105 (256)
T d1k92a2 80 GRHGLGMSDQIENRIIEAKSRGIYEA 105 (256)
T ss_dssp HTTTTTCEEEEEECTTSCEEEEEEEC
T ss_pred HHHCCEEEEEECCCCCCCCCCEEEEC
T ss_conf 76142367531455467420116615
No 10
>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}
Probab=31.66 E-value=9.8 Score=15.62 Aligned_cols=29 Identities=14% Similarity=0.532 Sum_probs=17.8
Q ss_pred HCCCCCEEECCCC-CCEEEEEEEEEEECCCCHHHEEEE
Q ss_conf 1389986974878-509997678986487302530220
Q gi|254780417|r 13 GFRTGEHIVYPAH-GVGTITEIKEQEVAGMKLEFFVIA 49 (188)
Q Consensus 13 ~FkvGD~VVy~~~-GVg~i~~I~~~~i~g~~~eyy~L~ 49 (188)
.-++||+|+|+.+ |. ....+.|.+ |+++.
T Consensus 58 ~vk~GD~Vl~~~~~g~------~~~~~dg~~--y~ii~ 87 (97)
T d1aono_ 58 DVKVGDIVIFNDGYGV------KSEKIDNEE--VLIMS 87 (97)
T ss_dssp SCCTTCEEEECCCSSC------EEEESSSCE--EEEEE
T ss_pred CCCCCCEEEEECCCCC------EEEEECCEE--EEEEE
T ss_conf 3799999999044485------089789979--99999
No 11
>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=30.98 E-value=8.7 Score=15.95 Aligned_cols=16 Identities=19% Similarity=0.642 Sum_probs=10.9
Q ss_pred HHCCCCCEEECCCCCC
Q ss_conf 3138998697487850
Q gi|254780417|r 12 QGFRTGEHIVYPAHGV 27 (188)
Q Consensus 12 ~~FkvGD~VVy~~~GV 27 (188)
..|++||.|+|...+-
T Consensus 76 ~~~~vGdrV~~~~~~~ 91 (147)
T d1qora1 76 KHIKAGDRVVYAQSAL 91 (147)
T ss_dssp CSCCTTCEEEESCCSS
T ss_pred CCCCCCCEEEEECCCC
T ss_conf 1233331012202652
No 12
>d2f5ka1 b.34.13.3 (A:6-88) Mortality factor 4-like protein 1, MRG15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.56 E-value=20 Score=13.70 Aligned_cols=52 Identities=12% Similarity=0.170 Sum_probs=28.0
Q ss_pred HHHCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEECCC--CCCEEEEECCC
Q ss_conf 531389986974878509997678986487302530220248--88569980520
Q gi|254780417|r 11 RQGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDK--DKMCLKVPVGK 63 (188)
Q Consensus 11 ~~~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~~~~--~~~~l~vPv~~ 63 (188)
+..|.+|+.|..-..|+..=..|......+... .|.++|-+ ..---.||.++
T Consensus 3 ~~~f~~ge~Vlc~~~~~lYeAkil~~~~~~~~~-~Y~VHy~GWn~~~DeWv~~~r 56 (83)
T d2f5ka1 3 KPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQV-KYFIHYSGWNKNWDEWVPESR 56 (83)
T ss_dssp SCSCCTTCEEEEESSSSEEEEEEEEEEEETTEE-EEEEEETTSCGGGCEEEEGGG
T ss_pred CCCCCCCCEEEEEECCEEEEEEEEEEEECCCCE-EEEEEECCCCCCCCCCCCHHH
T ss_conf 785578998999978905874899999758946-899986664874254027433
No 13
>d1j20a2 d.210.1.1 (A:171-395) Argininosuccinate synthetase, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=21.93 E-value=12 Score=14.97 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=18.5
Q ss_pred CCCCCEEEEEEEEEEECCCCHHHEEE
Q ss_conf 87850999767898648730253022
Q gi|254780417|r 23 PAHGVGTITEIKEQEVAGMKLEFFVI 48 (188)
Q Consensus 23 ~~~GVg~i~~I~~~~i~g~~~eyy~L 48 (188)
+.|||||+.-++++-++=+.+..|.-
T Consensus 77 g~~GIGR~d~vEnr~vG~KsR~vYEa 102 (225)
T d1j20a2 77 GRHGVGRVDIVENRFVGMKSRGVYET 102 (225)
T ss_dssp HHTTCCEEEEEEECTTSCEEEEEEEC
T ss_pred HHCEEEEECCCCCCCCCCCCCCEEEC
T ss_conf 32057553133654301202545655
No 14
>d1vl2a2 d.210.1.1 (A:174-409) Argininosuccinate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=21.79 E-value=14 Score=14.60 Aligned_cols=26 Identities=12% Similarity=0.240 Sum_probs=19.3
Q ss_pred CCCCCEEEEEEEEEEECCCCHHHEEE
Q ss_conf 87850999767898648730253022
Q gi|254780417|r 23 PAHGVGTITEIKEQEVAGMKLEFFVI 48 (188)
Q Consensus 23 ~~~GVg~i~~I~~~~i~g~~~eyy~L 48 (188)
+.|||||+.-++++-++=+.+..|.-
T Consensus 84 g~~GIGR~d~vEnr~vGiKsR~vYEa 109 (236)
T d1vl2a2 84 AKNGVGRLDMVENRFIGIKSRGVYET 109 (236)
T ss_dssp HHTTCCEEEEEEECSSSSEEEEEEEC
T ss_pred HHHEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 87613021245642002012101105
No 15
>d1bkba1 b.34.5.2 (A:4-74) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=21.71 E-value=20 Score=13.59 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=24.8
Q ss_pred HHHHHCCCCCEEECCCCCCEEEEEEEEEEEC
Q ss_conf 3453138998697487850999767898648
Q gi|254780417|r 9 AMRQGFRTGEHIVYPAHGVGTITEIKEQEVA 39 (188)
Q Consensus 9 ~~~~~FkvGD~VVy~~~GVg~i~~I~~~~i~ 39 (188)
+...+++.|.+|+|-+. .|+|.++....-+
T Consensus 9 i~a~~lKkG~~i~~~g~-p~~V~~~~~~kpg 38 (71)
T d1bkba1 9 VEAGELKEGSYVVIDGE-PCRVVEIEKSKTG 38 (71)
T ss_dssp EEGGGCCTTCEEEETTE-EEEEEEEEEECCS
T ss_pred EEHHHCCCCCEEEECCE-EEEEEEEEEECCC
T ss_conf 88999528889999999-9999888888899
No 16
>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.80 E-value=21 Score=13.47 Aligned_cols=49 Identities=14% Similarity=0.161 Sum_probs=37.1
Q ss_pred HHHCCCCCEEECCCCCCEEEEEEEEEEECCCCHHHEEEECCCCCCEEEEEC
Q ss_conf 531389986974878509997678986487302530220248885699805
Q gi|254780417|r 11 RQGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDKDKMCLKVPV 61 (188)
Q Consensus 11 ~~~FkvGD~VVy~~~GVg~i~~I~~~~i~g~~~eyy~L~~~~~~~~l~vPv 61 (188)
.+.|..||.|.-.=-|---+-+++...+.+..+.| .+.|- ++..+=++.
T Consensus 3 ~~k~~~Ge~vm~RwPgSsLyyev~vls~d~~~~~Y-tV~yk-DGTelelke 51 (55)
T d2diga1 3 SRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLY-TVKYK-DGTELELKE 51 (55)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEETTTTEE-EEECT-TSCEEEEET
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEE-EEEEC-CCCEEECCC
T ss_conf 52124784877306998358999998515864179-99964-786110332
Done!