BLAST/PSIBLAST alignment of GI: 254780417 and GI: 15890014 at iteration 1
>gi|15890014|ref|NP_355695.1| CarD family transcriptional regulator [Agrobacterium tumefaciens str. C58] Length = 189
>gi|15157987|gb|AAK88480.1| transcriptional regulator, CarD family [Agrobacterium tumefaciens str. C58] Length = 189
 Score =  280 bits (717), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 3/190 (1%)

Query: 1   MTFQQKRDAMRQGFRTGEHIVYPAHGVGTITEIKEQEVAGMKLEFFVIAFDKDKMCLKVP 60
           MT QQK+     GF+TGE IVYPAHGVGTI+ I+EQEVAGMKLE FVI F+KDKM LKVP
Sbjct: 1   MTTQQKKSPAHHGFKTGEAIVYPAHGVGTISAIEEQEVAGMKLELFVIDFEKDKMRLKVP 60

Query: 61  VGKAIDIGMRKLSEAHFVERALKLVRGKARVKRTMWSRRAQEYDAKINSGDLIAIAEVVR 120
           V KA+ IGMRKLSE  FVERALK+V+GKARVKRTMWSRRAQEYDAKINSGDLIAIAEVVR
Sbjct: 61  VAKAVSIGMRKLSEGDFVERALKVVQGKARVKRTMWSRRAQEYDAKINSGDLIAIAEVVR 120

Query: 121 DLHRTDSQPEKSYSERQLYESALNRMVREIAAVNSISEPEAINLIEVNLSSKSSKTEKST 180
           DL+R ++QPE+SYSERQLYE+AL+RM REIAAVN +SE EA+ L+EVNL +K  K  K+ 
Sbjct: 121 DLYRAENQPEQSYSERQLYEAALDRMAREIAAVNKMSETEAVRLVEVNL-AKGPKRGKTV 179

Query: 181 SEN--QDKAA 188
            E+  QD+AA
Sbjct: 180 EEDDSQDEAA 189