HHsearch alignment for GI: 254780418 and conserved domain: COG1825
>COG1825 RplY Ribosomal protein L25 (general stress protein Ctc) [Translation, ribosomal structure and biogenesis].
Probab=99.91 E-value=1.9e-24 Score=173.37 Aligned_cols=92 Identities=38% Similarity=0.655 Sum_probs=88.0
Q ss_pred EEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEECHHHEEHHCCCCCEEEEEECCCCCCEEEEEEEEECCC
Q ss_conf 99999991687617789999789943899678988556999800221001114662257996167752037861212143
Q gi|254780418|r 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDP 85 (191)
Q Consensus 6 ~~L~~~~R~~~gk~~~r~lR~~G~VPaviYG~~~e~~~i~v~~~~l~k~l~~~~~~~~v~~l~i~g~~~~vlikevQ~~p 85 (191)
T Consensus 2 ~~l~~~~R~~~Gkg~~RrlR~~G~iPAviYG~g~~~v~i~l~~~~~~k~~~~~~-~~~v~~l~v~g~~~~Vlvkd~Q~~p 80 (93)
T COG1825 2 RELEAEVRTSQGKGASRRLRRAGKIPAVVYGGGKEPVNIALDHHEFAKALRKLG-YSTVITLEVDGKEIKVLVKDVQRHP 80 (93)
T ss_pred CEECEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEECHHHHHHHHHHCC-CCEEEEEEECCEEEEEEEHHHHHCC
T ss_conf 320206853567606666876699888998999878469974899999974214-3337999979969999861111385
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 2684654489993
Q gi|254780418|r 86 VSDILIHADFLQV 98 (191)
Q Consensus 86 ~~~~i~HvDF~~v 98 (191)
T Consensus 81 ~~~~~~HvDf~~v 93 (93)
T COG1825 81 LTDEVQHIDFLRV 93 (93)
T ss_pred CCCCCEEEEEECC
T ss_conf 6586055522629