HHSEARCH alignment of GI: 254780418 and SCOP domain: d1dfup_

Alignment

Probab=99.94  E-value=6.3e-28  Score=192.39  Aligned_cols=93  Identities=30%  Similarity=0.507  Sum_probs=89.2

Q ss_pred             EEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEECHHHEEHHCCCCCEEEEEECCCCCCEEEEEEEEECCC
Q ss_conf             99999991687617789999789943899678988556999800221001114662257996167752037861212143
Q gi|254780418|r    6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDP   85 (191)
Q Consensus         6 ~~L~~~~R~~~gk~~~r~lR~~G~VPaviYG~~~e~~~i~v~~~~l~k~l~~~~~~~~v~~l~i~g~~~~vlikevQ~~p   85 (191)
                      ++|+|++|+..||+++|+||++|+||||+||++.+|++++++.++|.+.+++.++.+.+++|+++|+++.|++||||+||
T Consensus         2 ~~L~a~~R~~~Gk~~~r~lRr~G~vPaViYG~~~~~~~i~v~~~~l~~~l~~~~~~~~~i~l~~~g~~~~vlikevQ~~p   81 (94)
T d1dfup_           2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHP   81 (94)
T ss_dssp             CEEECEECSCCSHHHHHHHHHTTEEEEEEECSSSCCEEEEEEHHHHHHHTTSGGGGTSCBEEEETTEECCEEEEEEEECS
T ss_pred             EEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCEEEEEECCEEEEEEHEEEEECC
T ss_conf             48999992567857899999869962999888888817774499986443113413604999989959980010256557


Q ss_pred             CCCCEEEEEEEEE
Q ss_conf             2684654489993
Q gi|254780418|r   86 VSDILIHADFLQV   98 (191)
Q Consensus        86 ~~~~i~HvDF~~v   98 (191)
                      +++.++|+||++.
T Consensus        82 v~~~i~HvDF~r~   94 (94)
T d1dfup_          82 YKPKLQHIDFVRA   94 (94)
T ss_dssp             SSSCEEEEEEEEC
T ss_pred             CCCCEEEEEEECC
T ss_conf             8898788961149

SCOP domain information

class: All beta proteins
fold: Ribosomal protein L25-like
superfamily: Ribosomal protein L25-like
family: Ribosomal protein L25-like
domain: Ribosomal protein L25
species: Escherichia coli [TaxId: 562]