HHSEARCH alignment of GI: 254780418 and SCOP domain: d2zjrs1

Alignment
>d2zjrs1 b.53.1.1 (S:1-175) Ribosomal protein TL5 (general stress protein CTC) {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=0  Score=346.56  Aligned_cols=172  Identities=28%  Similarity=0.478  Sum_probs=162.1

Q ss_pred             EEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEECHHHEEHHCCCCCEEEEEECCCC-CCEEEEEEEEECCC
Q ss_conf             99999916876177899997899438996789885569998002210011146622579961677-52037861212143
Q gi|254780418|r    7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDP   85 (191)
Q Consensus         7 ~L~~~~R~~~gk~~~r~lR~~G~VPaviYG~~~e~~~i~v~~~~l~k~l~~~~~~~~v~~l~i~g-~~~~vlikevQ~~p   85 (191)
                      +|+|++|+      +|++|++|+||||+||++ +|+++++++++|.++++. .+.+++|+|+++| +++.||+||+|+||
T Consensus         2 ~l~a~~r~------~k~~R~~G~VPaViYG~~-~~~~i~v~~~~l~k~l~~-~~~~~li~l~i~g~~~~~vlikevQ~~p   73 (175)
T d2zjrs1           2 ELTAKPRT------PKQKLDESMIAAVAYNKE-NNVSFALDRKAFDRAFRQ-QSTTGLFDITVEGGETFPALVKAVQMDK   73 (175)
T ss_dssp             CCCBCCSC------CHHHHSSSCCCEEEESSS-CCCCCBCCHHHHHHHHHH-HTTSCCCBCCCTTCCCCBCCEEEEEECS
T ss_pred             EEEECCCH------HHHHHHCCCCCEEEECCC-CCEEEEECHHHHHHHHHH-CCCCEEEEEEECCCCEEEEEEHHHHHHH
T ss_conf             54741224------778864899778997899-887899829999999973-5765379999517945998810201455


Q ss_pred             CCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEE-HHHCCCEEEECCCCCCCCCEEEEEE
Q ss_conf             268465448999328976999963699605654432123113576545788880-7679634683222235697799997
Q gi|254780418|r   86 VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMED  164 (191)
Q Consensus        86 ~~~~i~HvDF~~v~~~~~v~v~VPI~~~ge~~~~Gvk~GG~l~~~~~~i~v~~~-p~~IPe~ievDvs~L~~Gd~i~v~D  164 (191)
                      +++.++|+|||+++++++++++|||+|+|+  |+|+++||+|++.+++++++|. |.+||++|++|||+|++||+++++|
T Consensus        74 v~~~i~HvDF~~v~~~~~i~v~VPi~~~G~--~~gvk~Gg~l~~~~~~i~v~~~~P~~IP~~i~vDvs~L~iGd~i~v~D  151 (175)
T d2zjrs1          74 RKRAPIHVDFYMVTYGEPVEVSVPVHTTGR--SQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGD  151 (175)
T ss_dssp             SSCCEEEEEEECCCSSCCCEEEEECEEESC--CTTTTTTSEEECSCSEEEEECCCTTCCCSCCEEECTTCCSSCEEETTT
T ss_pred             CCCCEEEEEEEECCCCCEEEEEEEEEEECC--CCCCCCCCEEEEEEHHHHHHCCCHHHCCCEEEECCHHCCCCCEEEEEE
T ss_conf             348636789986179967999999996012--555225522444210023333383448842995421066898699984


Q ss_pred             EECCCCCEECCCCCCEEEEEECCC
Q ss_conf             535888678368982699994488
Q gi|254780418|r  165 IRLPEKTSSMSQLNITIATIVAPI  188 (191)
Q Consensus       165 l~lpegv~~l~d~~~~vvsv~~P~  188 (191)
                      |++|+|+++++|+|++||+|.+||
T Consensus       152 l~lp~gv~~~~d~~~~v~~V~~pr  175 (175)
T d2zjrs1         152 IKLPEGCTLAADPELTVVSVLPPR  175 (175)
T ss_dssp             SCCSTTCCCCSCTTCEEEEEECCC
T ss_pred             ECCCCCCEECCCCCCEEEEEECCC
T ss_conf             417998089259996799995789


SCOP domain information

class: All beta proteins
fold: Ribosomal protein L25-like
superfamily: Ribosomal protein L25-like
family: Ribosomal protein L25-like
domain: Ribosomal protein TL5 (general stress protein CTC)
species: Deinococcus radiodurans [TaxId: 1299]