BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] (191 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] Length = 191 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF Sbjct: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG Sbjct: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT Sbjct: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 Query: 181 IATIVAPISGS 191 IATIVAPISGS Sbjct: 181 IATIVAPISGS 191 >gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 191 Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 134/191 (70%), Positives = 161/191 (84%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+E KL + R+KVGKGS+RLLR+NG+IPA IYGN+S PK IALS KDISKRLYSK+F Sbjct: 1 MSQEEYKLKTITREKVGKGSSRLLRRNGKIPATIYGNISSPKSIALSTKDISKRLYSKHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTI T+D+GKE + V+PKDYQLDPVSD+LIH DFLQ+SE ST++V VP+RFIN+NKSPG Sbjct: 61 MTTIFTIDLGKESIRVLPKDYQLDPVSDVLIHMDFLQISEKSTISVQVPIRFINQNKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN++CHE+ LLCPAN IPDSI+ DL+ LKIGD+IHM DIRLPE +S+S N T Sbjct: 121 LKMGGSLNIICHEIPLLCPANKIPDSISADLDGLKIGDNIHMTDIRLPEGITSVSHANST 180 Query: 181 IATIVAPISGS 191 IA I APIS S Sbjct: 181 IAKISAPISSS 191 >gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CIAT 894] Length = 201 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 99/190 (52%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG LN+V HEV + CPA+ IP+ VDLN KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 IKVGGVLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium meliloti 1021] gi|307305661|ref|ZP_07585408.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] gi|307317664|ref|ZP_07597103.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|71153163|sp|Q92N68|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021] gi|306896822|gb|EFN27569.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|306902364|gb|EFN32960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] Length = 204 Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/181 (54%), Positives = 134/181 (74%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A RD+VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ FMTT+ T Sbjct: 6 ELKAETRDRVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGFMTTVAT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG+KQGG Sbjct: 66 IDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGA 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIV 185 LN+V HEV L A+NIP+S+TVDL LKIGD++H+ +++LP T ++ + T+ATI Sbjct: 126 LNIVRHEVELNVSADNIPESLTVDLTGLKIGDTVHISNVKLPAGATPVIADRDFTVATIT 185 Query: 186 A 186 Sbjct: 186 G 186 >gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. viciae 3841] gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv. viciae 3841] Length = 202 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 202 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 202 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSANTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ VDL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP +G Sbjct: 181 IATIIAPAAG 190 >gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] Length = 203 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512] Length = 203 Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42] Length = 233 Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 30 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 89 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 90 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 149 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 150 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 209 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 210 IATIVAPAGG 219 >gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CFN 42] gi|109893385|sp|Q2K5U4|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 204 Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 181 IATIVAPAGG 190 >gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium fredii NGR234] gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234] Length = 228 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 134/181 (74%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS K+++ ++++ FMTT+ T Sbjct: 31 ELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSIALSTKEVTMKIHAGGFMTTVAT 90 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG+KQGG Sbjct: 91 IDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGT 150 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIV 185 LN+V HEV L A+NIP+ ++VDL+ LKIGD++H+ D++LP T ++ + T+ATI Sbjct: 151 LNIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIADRDFTVATIA 210 Query: 186 A 186 Sbjct: 211 G 211 >gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Kim 5] Length = 202 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGFIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium medicae WSM419] gi|166223724|sp|A6UBR5|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium medicae WSM419] Length = 207 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 132/181 (72%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ FMTT+ T Sbjct: 6 ELKAETRERVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGFMTTVAT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + + V+PKDYQLDPV D +H DFL+V +GS V+V VPVRF NE KSPG+KQGG Sbjct: 66 IDVDGKKIRVLPKDYQLDPVRDFTMHVDFLRVKKGSQVSVQVPVRFENEEKSPGLKQGGA 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIV 185 LN+V HEV L A+NIP+ +TVDL LKIGD++H+ ++ LP T ++ + T+ATI Sbjct: 126 LNIVRHEVELNVSADNIPEFLTVDLTGLKIGDTVHISNVELPAGATPVITDRDFTVATIA 185 Query: 186 A 186 Sbjct: 186 G 186 >gi|222086595|ref|YP_002545129.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] Length = 203 Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGSAR LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHESYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + V+PKDYQLDPV D +H DFL+VS S VTV +PV F+N+ KSPG Sbjct: 61 LTTIATIDVDGTKIKVLPKDYQLDPVRDFTLHIDFLRVSGNSQVTVEIPVHFVNQEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K GG LN+V HEV + CPA+ IP+ TVDL+ LK GDSIH+ + LP+ ++ + Sbjct: 121 LKAGGVLNIVRHEVEVHCPADAIPEFFTVDLSGLKAGDSIHISHVTLPKGVVPVIADRDF 180 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 181 TIATIVAPAAG 191 >gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] Length = 234 Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 96/182 (52%), Positives = 131/182 (71%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R +VGKGSAR LR+NG IPA+IYG+ DP IALS KD++ ++++ FMTTI T Sbjct: 29 ELKAEARAQVGKGSARELRRNGLIPAVIYGDKKDPVSIALSRKDVTLKIHAGGFMTTIAT 88 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+PKDYQLDPV D L+H DFL++S+ + VTV +PV F NE KSPGIK+GG Sbjct: 89 IDVDGTKYSVLPKDYQLDPVRDFLMHVDFLRISKNTQVTVEIPVHFENEEKSPGIKRGGV 148 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LNVV H V CPAN+IP+++ VDL L++GD +H+ + LPE +++ + TIAT+ Sbjct: 149 LNVVRHTVECNCPANSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPTITDRDFTIATVA 208 Query: 186 AP 187 AP Sbjct: 209 AP 210 >gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli GR56] Length = 204 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 94/190 (49%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV F NE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFTNEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H+V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHQVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium vitis S4] gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4] Length = 200 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/188 (51%), Positives = 133/188 (70%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGS+R LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHASYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPIAITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ E + V+PKDYQLDPV D +H DFL+VS S VTV VPVRF+NE+KS Sbjct: 61 MTTVATIEVNGEKIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVNEDKS-A 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K G LN+V H+V L PANNIP++IT DL LKIGDS+H+ ++LP T ++ + Sbjct: 120 VKTGAVLNIVRHDVELQVPANNIPEAITFDLEGLKIGDSVHISAVKLPSGVTPVITDRDF 179 Query: 180 TIATIVAP 187 TIAT+VAP Sbjct: 180 TIATLVAP 187 >gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium tumefaciens str. C58] gi|71153115|sp|Q8UDA0|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium tumefaciens str. C58] Length = 202 Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/191 (51%), Positives = 138/191 (72%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + + V+PKDYQLDPV D +H DFL+VS + V V +PV F NE KS Sbjct: 61 MTTVGTIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKS-D 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 IK GG LN+V H V CPAN+IP++ITVDL+ LKIGDS+H+ +++LP+ T ++ + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKLPKNITPVIADRDF 179 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 180 TIATIVAPAAG 190 >gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella bacilliformis KC583] gi|166223664|sp|A1UTH4|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583] Length = 205 Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A +R++VGKGS+R LR+NG IPA+IYG+ P I++ K++ +++ F TT Sbjct: 3 KSYTLKAEVRERVGKGSSRELRRNGFIPAVIYGDKQPPLAISVPYKEVFYKIHGGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I TL+IGKE + V+PKDYQLDPV D +H DFL+VS S V V++PV F+NE+ +PGIK+ Sbjct: 63 IATLEIGKEKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ PAN IPD+I +DL+ IGDSIH+ ++LPE + + Q N TIA Sbjct: 123 GGVLNIVRHEIECTAPANAIPDAIQIDLSSYSIGDSIHISAVQLPEGVTPVIQDRNFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 213 Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 94/187 (50%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V HEV CPAN IP+ ITVDL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGANIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella quintana str. Toulouse] gi|71153120|sp|Q6G0F8|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse] Length = 208 Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 92/185 (49%), Positives = 132/185 (71%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++Y+ F TT Sbjct: 3 KSYTLKAELRERVGKGSSRELRRNGFIPAVIYGDKQPPLAIAVSYKEIFYKIYAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T+ +G++ + V+PKDYQLDPV D IH DFL+VS S V V +PV F NE+ +PG+K+ Sbjct: 63 VATIAVGQQKIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ + PAN IP++I +DL++ IGDSIH+ ++LP+ + + Q + TIA Sbjct: 123 GGVLNIVRHEIECIAPANAIPEAIEIDLSNYSIGDSIHISVVKLPKDVTPVIQDRDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] Length = 203 Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 97/188 (51%), Positives = 134/188 (71%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ +D+ + + V+PKDYQLDPV D +H DFL+VS + V V VPV F NE KS Sbjct: 61 MTTVAVIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKSE- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK GG LN+V H V CPAN+IP+ ITVDL+ LKIGDS+H+ +++LP+ S ++ + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKLPKNISPVIADRDF 179 Query: 180 TIATIVAP 187 TIATIVAP Sbjct: 180 TIATIVAP 187 >gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium loti MAFF303099] gi|71153162|sp|Q98HV7|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099] Length = 213 Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 93/187 (49%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVQLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|260467097|ref|ZP_05813276.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] gi|259029109|gb|EEW30406.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] Length = 212 Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 92/187 (49%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 T+ATI Sbjct: 181 TVATIAG 187 >gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1] Length = 204 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/185 (49%), Positives = 133/185 (71%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++++ F TT Sbjct: 3 KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKEIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T+++ K+ + V+PKDYQLDPV D +H DFL+VSE S V V++PV F+NE+ +PGIK+ Sbjct: 63 VATIEVDKKRIQVLPKDYQLDPVRDFPLHVDFLRVSEKSVVHVNIPVHFLNEDTAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + Q + TIA Sbjct: 123 GGVLNIVRHEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPKGVTPVIQDRDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella canis ATCC 23365] gi|254704788|ref|ZP_05166616.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 3 str. 686] gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] gi|189042347|sp|A9M6K0|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365] gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] Length = 207 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 7 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 67 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ T ++ + TIATI A Sbjct: 127 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis ATCC 25840] gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840] Length = 233 Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 33 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGSGFKTTVATI 92 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 93 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 152 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ T ++ + TIATI A Sbjct: 153 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 212 Query: 187 P 187 P Sbjct: 213 P 213 >gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis 1330] gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 1 str. 9-941] gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis biovar Abortus 2308] gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. 16M] gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis ATCC 23445] gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus S19] gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis ATCC 23457] gi|254689721|ref|ZP_05152975.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 6 str. 870] gi|254694210|ref|ZP_05156038.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 3 str. Tulya] gi|254697864|ref|ZP_05159692.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 2 str. 86/8/59] gi|254702253|ref|ZP_05164081.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 5 str. 513] gi|254708201|ref|ZP_05170029.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M163/99/10] gi|254710571|ref|ZP_05172382.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis B2/94] gi|254730754|ref|ZP_05189332.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 4 str. 292] gi|256032065|ref|ZP_05445679.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M292/94/1] gi|256045157|ref|ZP_05448056.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. Rev.1] gi|256061587|ref|ZP_05451728.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella neotomae 5K33] gi|256114108|ref|ZP_05454862.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 3 str. Ether] gi|256160261|ref|ZP_05457955.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M490/95/1] gi|256255467|ref|ZP_05461003.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti B1/94] gi|256257972|ref|ZP_05463508.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 9 str. C68] gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260169200|ref|ZP_05756011.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. F5/99] gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99] gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|68053010|sp|Q57BY2|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053226|sp|Q8YIG3|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153128|sp|Q8FZE8|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893347|sp|Q2YLX6|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042348|sp|B0CHX4|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736287|sp|B2S6Z6|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801037|sp|C0REH1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis 1330] gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella abortus bv. 1 str. 9-941] gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308] gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445] gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19] gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457] gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99] gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28] gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90] Length = 207 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 7 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 67 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ T ++ + TIATI A Sbjct: 127 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M] gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] Length = 233 Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 33 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 92 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 93 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 152 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ T ++ + TIATI A Sbjct: 153 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 212 Query: 187 P 187 P Sbjct: 213 P 213 >gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella henselae str. Houston-1] gi|71153119|sp|Q6G2L2|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1] Length = 206 Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 93/185 (50%), Positives = 132/185 (71%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S KDI ++++ F TT Sbjct: 3 KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKDIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + TL I K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG+K+ Sbjct: 63 VATLAIDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + Q + TIA Sbjct: 123 GGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVNPVIQDRDFTIA 182 Query: 183 TIVAP 187 TIVAP Sbjct: 183 TIVAP 187 >gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum anthropi ATCC 49188] gi|166223698|sp|A6WZE3|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum anthropi ATCC 49188] Length = 209 Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 7 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 67 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V H+V L+ PAN IP+++ DL L+IGDS+H+ I+LP+ T+++ + TIATI A Sbjct: 127 NIVRHDVELIVPANAIPEALEFDLTGLEIGDSVHISAIKLPKGVTAAIQDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] Length = 277 Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 76 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 135 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 136 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 195 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V H+V L+ PAN IP+++ VDL L+IGDS+H+ I+LP+ T ++ + TIATI A Sbjct: 196 NIVRHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTPAIQDRDFTIATIAA 255 Query: 187 P 187 P Sbjct: 256 P 256 >gi|254714754|ref|ZP_05176565.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M644/93/1] gi|254717815|ref|ZP_05179626.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M13/05/1] gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] Length = 207 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 7 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL VS S V V+VPV F NE +PGIK+GG L Sbjct: 67 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLLVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ T ++ + TIATI A Sbjct: 127 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|254719568|ref|ZP_05181379.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. 83/13] gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] Length = 207 Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 91/181 (50%), Positives = 130/181 (71%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F TT+ T+ Sbjct: 7 LKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PGIK+GG L Sbjct: 67 EVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++ P+ T ++ + TIATI A Sbjct: 127 NVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKPPKGATPAIQDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] Length = 208 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 88/185 (47%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K A +R++VGKGS+R LR+NG IPA+IYGN P I++ K+I ++++ F TT Sbjct: 3 KSYTFKAEIRERVGKGSSRKLRRNGLIPAVIYGNKQPPLAISVPYKEIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T++I K+ + V+PKDYQLDP+ D IH DFL++S S V VH+PV F+NE+ +PGIK+ Sbjct: 63 VATIEIDKQKIQVLPKDYQLDPIRDFPIHVDFLRISATSVVHVHIPVHFLNEDMAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIA 182 GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ T + + + TIA Sbjct: 123 GGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3] Length = 205 Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 89/189 (47%), Positives = 131/189 (69%), Gaps = 1/189 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F TT Sbjct: 3 KSYTFKAEIREQVGKGSSRKLRRNGFIPAVIYGDKQPPLAISVPYKDIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PGIK+ Sbjct: 63 VATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSVVHVHIPVHFLNEDTAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIA 182 GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ T + + + TIA Sbjct: 123 GGILNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDFTIA 182 Query: 183 TIVAPISGS 191 TI AP + S Sbjct: 183 TIAAPANTS 191 >gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium sp. BNC1] gi|123057768|sp|Q11GC6|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1] Length = 210 Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 93/185 (50%), Positives = 131/185 (70%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + +L+A R++VGKGSAR +R+NG+IPA+IYG+ P I L K++ R+++ F TT Sbjct: 3 QSYELTAEARERVGKGSARAIRRNGKIPAVIYGDKQPPLSITLPYKEVFLRIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T+D+ E + V+PKDYQLDPV +H DFL+V + + VTV+VPV FIN+ K+PGIK+ Sbjct: 63 VATIDLNGEKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIA 182 GG LN+V HEV CPAN IPD I VDL L IGDS+H+ ++LPE +++ + TIA Sbjct: 123 GGVLNIVRHEVEFTCPANAIPDFIEVDLTGLDIGDSVHISAVKLPEGIVPTITDRDFTIA 182 Query: 183 TIVAP 187 T+ AP Sbjct: 183 TVAAP 187 >gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella tribocorum CIP 105476] gi|189042346|sp|A9IR85|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476] Length = 209 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/187 (47%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F TT Sbjct: 3 KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG+K+ Sbjct: 63 IATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + Q + TIA Sbjct: 123 GGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPIIQDRDFTIA 182 Query: 183 TIVAPIS 189 TI AP S Sbjct: 183 TIAAPAS 189 >gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498] Length = 208 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/185 (47%), Positives = 128/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F TT Sbjct: 3 KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFHKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PGIK+ Sbjct: 63 VATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + Q + TIA Sbjct: 123 GGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C] Length = 208 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/185 (47%), Positives = 128/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F TT Sbjct: 3 KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PGIK+ Sbjct: 63 VATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + Q + TIA Sbjct: 123 GGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] Length = 219 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 84/161 (52%), Positives = 116/161 (72%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R+KVGKG+AR LR+NG IPA+IYG+ DP PIA+ K+ L++ FMT + T+ Sbjct: 7 VKAEAREKVGKGAARHLRRNGMIPAVIYGDKQDPLPIAIPYKETFLALHAGGFMTHVATI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + V+PKDYQL+PV D L+H DFL+VSE + VTV++PV F NE SPG+K+GG + Sbjct: 67 EVNGQKISVLPKDYQLEPVRDFLMHVDFLRVSEKTRVTVNIPVHFENEEASPGLKRGGVI 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 NVV HEV + PA+ IP+ T+DL L+IGDSIH + LP Sbjct: 127 NVVRHEVEVHAPASAIPEYFTLDLTGLEIGDSIHASALTLP 167 >gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] Length = 209 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/185 (47%), Positives = 126/185 (68%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F TT Sbjct: 3 KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTT 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG+K+ Sbjct: 63 IATIILDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIA 182 GG LN+V HE+ PA+ IP++I +DL IGDSIH+ ++LP+ + + Q + TIA Sbjct: 123 GGVLNIVRHEIECTAPASAIPEAIEIDLASYSIGDSIHISAVQLPKDVTPIIQDRDFTIA 182 Query: 183 TIVAP 187 TI AP Sbjct: 183 TIAAP 187 >gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium chloromethanicum CM4] gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] gi|254801054|sp|B7KNU8|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium chloromethanicum CM4] gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] Length = 228 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 89/181 (49%), Positives = 118/181 (65%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGFKTTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PGIKQ GG Sbjct: 67 DAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNV H VSL + IPD+I VDL +IGD IH D+RLP T + + T+A ++ Sbjct: 127 LNVALHTVSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAGTYTGEPTD-TVANLLP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25/general stress protein Ctc [Azorhizobium caulinodans ORS 571] gi|172047829|sp|A8HS67|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571] Length = 207 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 129/181 (71%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L AV R + GKG+AR R+ G++PA+IYG +P I+L K+I++ +Y+ +F+TT+ Sbjct: 6 ELKAVARARGGKGAARAERRAGRVPAVIYGEKQEPVTISLGHKEITRIIYAGHFLTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ VIP+DYQLDPV D+ +H DFL+VS+G++VTV VPV F N++K+PG+K GG Sbjct: 66 IDVDGVKHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFENQDKAPGLKSGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V+L CPA IPD + DL L+IGDS+H+ ++LP SS + T+ATIVA Sbjct: 126 LNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVSSAVTGDDTLATIVA 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] Length = 208 Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/185 (45%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K +SK L + +F + Sbjct: 3 EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLSKLLGTGHFFNS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ +++ + V +PKD PV+D +HADFL+VSE +TV V+VPVRF NE+ +PG+K+ Sbjct: 63 VVMVEVNGKAVRTLPKDVAFHPVTDRPLHADFLRVSEHATVNVNVPVRFENEDAAPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIA 182 GG LNVV H+V L+ A NIP+ + VDL ++GDSIH+ + LP+ +++ + TIA Sbjct: 123 GGVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSIHISAVTLPKGAKTAIDDRDFTIA 182 Query: 183 TIVAP 187 TIVAP Sbjct: 183 TIVAP 187 >gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] Length = 232 Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 83/163 (50%), Positives = 114/163 (69%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R+KVGKG+AR LR+N IPA+IYG+ DP PIAL K+ L++ FMT + T Sbjct: 6 EVKAEKREKVGKGAARALRRNAMIPAVIYGDNKDPLPIALPYKETFLALHAGGFMTNLAT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + +GKE + V+P+DYQLDPV D L H DFL+V E + VTV +PV F NE +SPG+++GG Sbjct: 66 ITVGKEKIKVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGLERGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 LNVV H V + C AN+IP+ T+DL +IGD++ I LP+ Sbjct: 126 LNVVRHAVEVECSANSIPEYFTIDLTGTEIGDTLASSSITLPD 168 >gi|163851898|ref|YP_001639941.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4] gi|226736336|sp|A9W5L4|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens DM4] Length = 228 Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGFKTTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PGIKQ GG Sbjct: 67 DAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNV H +SL + IPD+I VDL +IGD IH D+RLP T + + T+A ++ Sbjct: 127 LNVALHTLSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAGTYTGEPTD-TVANLLP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium nodulans ORS 2060] gi|254801055|sp|B8IFN5|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium nodulans ORS 2060] Length = 211 Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 84/181 (46%), Positives = 119/181 (65%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F+TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLTTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 ++G + IP+DYQLDPV D+ +H DFL+V+ G TV V VPV F+N++ +PG+KQ G Sbjct: 67 EVGGRKIRAIPRDYQLDPVKDLPLHVDFLRVTAGQTVAVEVPVHFVNQDAAPGLKQKSGM 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V+L + IPD+I VDL IGD+IH+ D+ LP S + T+AT+V Sbjct: 127 LNVVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSDLALPAGASLALDPSETVATLVP 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|307292917|ref|ZP_07572763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] gi|306880983|gb|EFN12199.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] Length = 204 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 83/185 (44%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F + Sbjct: 3 EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHFFNS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ +++G + V +PKD PVSD +HADFL+VSE +TV V+VPV F NE+ SPG+K+ Sbjct: 63 VVFVEVGGKKVRTLPKDVAFHPVSDRPLHADFLRVSEHATVHVNVPVVFKNEDASPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIA 182 GG LN+V HEV L+ A IPD + VDL L +G++IH+ ++LP+ ++ + + T+A Sbjct: 123 GGVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETIHISAVKLPKGAKAAHDETDFTVA 182 Query: 183 TIVAP 187 TIVAP Sbjct: 183 TIVAP 187 >gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis alaskensis RB2256] gi|122985000|sp|Q1GSP2|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256] Length = 212 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 82/184 (44%), Positives = 129/184 (70%), Gaps = 1/184 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R++ GKG++R LR+NG++PA++YG +P I + K + K+L + +FM ++ Sbjct: 4 QLTLTAETRERGGKGASRELRRNGRVPAVVYGGKEEPLMIHVEEKLLMKQLMTGHFMNSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +++G + + +PKD PV D IHADFL++++ +TV V VPV F NE KSPG+K+G Sbjct: 64 VMIEVGGKQIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPVVFQNEEKSPGLKRG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIAT 183 G LN+V HE+ L+C A+NIPD I +D+ IGDSIH+ ++ LP+ S+++ + TIAT Sbjct: 124 GVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISNVTLPKGVESAITDRDFTIAT 183 Query: 184 IVAP 187 IVAP Sbjct: 184 IVAP 187 >gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium populi BJ001] gi|226736337|sp|B1Z970|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium populi BJ001] Length = 228 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPEAIAVDLIRTRTLIYAGGFKTTLFDI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 +G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+N+ K+PGIKQ GG Sbjct: 67 TVGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNDEKAPGIKQKGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNV H VSL + IPD+I VDL +IGD IH D+RLP T + + T+A I+ Sbjct: 127 LNVALHTVSLDVAPDQIPDAIEVDLTGREIGDVIHASDLRLPAGTYTGEPTD-TVANILP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1] gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1] Length = 228 Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 124/181 (68%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GKG++R LR+ G++PA+IYG +P I + K++ K+L + +FM +I+ + Sbjct: 7 LPAEARERAGKGASRALRREGRVPAVIYGGKEEPTTIHVEEKELVKQLMTGHFMNSIVKI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G E + +PKD L PV+D HADF ++S + V V +PV F+ E +SPG+K+GG L Sbjct: 67 EVGGETIRTLPKDVALHPVTDRPTHADFFRLSRDAKVEVQIPVVFVGEEQSPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVA 186 NVV HE+ L+C A+ IP I + + ++GDSIH+ ++ LPE + SS++ + TIAT+VA Sbjct: 127 NVVRHELDLICEADKIPGEIEISVEGKEVGDSIHISEVNLPEGSVSSITDRDFTIATLVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] Length = 207 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 122/185 (65%), Gaps = 1/185 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A RD+VGKG+AR LR+ G +PA+IYG+ +PI + K+ + L+ F+T I T Sbjct: 6 ELKASARDRVGKGAARALRREGLLPAVIYGDKKPAQPITIPVKETTLTLHKGGFLTHIGT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +DI E VI KDYQL PV D ++H DFL+VS+ +T+TV +PV FINE PG+K+GG Sbjct: 66 IDIDGEKHQVIAKDYQLHPVRDDVLHVDFLRVSKNTTLTVDIPVTFINEETCPGLKKGGM 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LNVV H V L PAN IP+++ DL + IGD++H+ LPE +++ + T+AT+ Sbjct: 126 LNVVRHTVELQVPANAIPETLVFDLAKVDIGDTLHISATDLPEGAQPTITDRDFTVATLA 185 Query: 186 APISG 190 AP G Sbjct: 186 APGGG 190 >gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S] gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S] Length = 204 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 128/185 (69%), Gaps = 1/185 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F + Sbjct: 3 EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHFFNS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ +++G + V + KD PV+D +HADFL+VSE +TV V+VPV F NE+ SPG+K+ Sbjct: 63 VVFVEVGGKKVRTLAKDVAFHPVTDRPLHADFLRVSEHATVHVNVPVIFKNEDASPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIA 182 GG LN+V HE+ L+ A IPD + +DL L +GDSIH+ ++LP+ ++ + + T+A Sbjct: 123 GGVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGAVKLPKGAKAAHDETDFTVA 182 Query: 183 TIVAP 187 TIVAP Sbjct: 183 TIVAP 187 >gi|170750343|ref|YP_001756603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] gi|226736338|sp|B1LZ78|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] Length = 227 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGQIPAVIYGGGQPPQSIAVDLIRTRTLIYAGGFKTTLFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 + G + V IP+D+QLDPV+ + +H DFL+V G TVTV VPV F+NE+ +PGIK+ GG Sbjct: 67 NAGGKKVRAIPRDFQLDPVTGVPLHVDFLRVVSGQTVTVEVPVHFVNEDAAPGIKKLGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LN+V H +SL + IPD+I VDL IGD IH+ DI++P T + + +A IV Sbjct: 127 LNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDVIHVSDIKIPAGTYTGEATD-PVANIVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] Length = 227 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 83/181 (45%), Positives = 123/181 (67%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD+VGKG+AR LR+N +PA+IYG+ DP IAL K+ + +++ FMTT+L + Sbjct: 7 LTAQARDRVGKGAARELRRNNMVPAVIYGDKKDPLSIALPRKETTLAIHAGGFMTTLLDI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + V+PKDYQL PVSD+++H D L+VS + VTV +PV F+NE + G+K GG L Sbjct: 67 EVDGKKHKVLPKDYQLHPVSDVVMHVDLLRVSAKTAVTVEIPVVFLNEEECIGLKAGGTL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 NVV V + CPAN+IPD+ +DL IGDS+++ + +PE +++ + TIATI Sbjct: 127 NVVRFTVEVNCPANSIPDNFEIDLTSYDIGDSVNISAVDMPEGAEPTITDRDFTIATIAT 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium aromaticivorans DSM 12444] gi|109893374|sp|Q2G6G9|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM 12444] Length = 204 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA RD+ GKG++R LR+ G+ PA+IYG +P I L K + K L + +F +++ L Sbjct: 7 LSAETRDRAGKGASRALRREGRTPAVIYGGNEEPVAIHLEEKALVKALGTGHFFNSVVEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V +PKD PV+D HADFL+VS+ S V V+VPV F NE KSPG+K+GG L Sbjct: 67 TVGGQTVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVA 186 N+V HE+ L+C + IPD I +D+ ++GDSIH+ ++LP S+++ + TIATIVA Sbjct: 127 NIVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVKSAITDRDFTIATIVA 186 Query: 187 PIS 189 P S Sbjct: 187 PSS 189 >gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] Length = 227 Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 81/183 (44%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R GKG+AR +R+ G+IP +IYG P P++L K+++K +Y+ +F+TTI Sbjct: 6 KLAAAVRSGTGKGAARSVRREGRIPGVIYGGGDAPTPLSLDQKELTKLIYAGHFLTTIFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + IP+DYQLD V D +H DFL++ GS + + VPV FIN SPG+K+GG Sbjct: 66 LDIDGKTERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLRIDVPVHFINHEASPGLKRGGS 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 LNVV H V + PA+NIPD IT DL L+ D++H+ LP + N T+ +I Sbjct: 126 LNVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAFTLPPNCKPTNPDKNFTVVSIT 185 Query: 186 API 188 P+ Sbjct: 186 PPL 188 >gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] Length = 209 Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 81/184 (44%), Positives = 120/184 (65%), Gaps = 1/184 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R GKG+AR +R+ G+IPA++YG P PI+L K ++ +++ +F+TTI L Sbjct: 7 LAATVRSGTGKGAARSVRREGRIPAVLYGGGEAPLPISLDKKVTTQLIFAGHFLTTIFEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + IP+DYQLD V D +H DFL++ GS + V+VPV FIN++ +PGIK+GG L Sbjct: 67 DIDGKKERAIPRDYQLDVVKDFPLHVDFLRLKPGSRLKVNVPVHFINQDAAPGIKRGGSL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVA 186 N+V H V + PA+NIP++IT DL + DS+H+ I LPE + N T+A++ Sbjct: 127 NIVYHTVEMWVPADNIPEAITADLAGMDFNDSLHISAIPLPEGCKPTNPDKNFTVASLAP 186 Query: 187 PISG 190 P G Sbjct: 187 PAGG 190 >gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] Length = 207 Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 84/182 (46%), Positives = 123/182 (67%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F+T I Sbjct: 6 ELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITIPVKETTITLHKGGFLTHIGM 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ E VI KD+QL PV D ++H DFL+VS+GST+TV VPV F+NE PGIK+GG Sbjct: 66 IDVDGEKHQVIAKDFQLHPVRDDVMHVDFLRVSKGSTLTVEVPVHFLNEETCPGIKKGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN+V H V + PA+NIP+++ +DL + GDS+H+ ++LPE +++ + TIATI Sbjct: 126 LNIVRHTVEMNVPADNIPEALEIDLAKAQPGDSLHISAVKLPEGCQPTITDRDFTIATIA 185 Query: 186 AP 187 AP Sbjct: 186 AP 187 >gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 226 Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGQIPAVIYGGNQPPQSIAIDLIRTRTLIYAGGFKTTLFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQGGK 126 +G + IP+D+QLDPVS + +H DFL+V G TVTV VPV F+NE+++PGI K+GG Sbjct: 67 TVGGKKTRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNEDQAPGIKKKGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNV H +SL + IPD++ +DL +IGD IH D+RLP S + T+A I+ Sbjct: 127 LNVALHTLSLEVAPDQIPDAVEIDLAGREIGDVIHASDLRLPAG-SYTGEPTDTVANILP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter litoralis HTCC2594] gi|122544539|sp|Q2NAN1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594] Length = 229 Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 124/181 (68%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GKG++R LR+ G++PA+IYG +P I + K + K+L + +FM +I+ + Sbjct: 7 LPAEARERAGKGASRALRREGRVPAVIYGGKEEPTMIHVEEKLLIKQLMTGHFMNSIVEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +IG + V +PKD L PVSD HADF ++++G + V VPV F+NE SPG+K+GG L Sbjct: 67 EIGGKTVRTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPVVFMNEEASPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVA 186 NVV HE+ L+C + IP I +D+ ++GDSIH+ +I LPE + S+++ + TIAT+VA Sbjct: 127 NVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISEITLPEGSESAITDRDFTIATLVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|154246548|ref|YP_001417506.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] gi|226694603|sp|A7IIK6|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] Length = 203 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/181 (46%), Positives = 122/181 (67%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L AV R + GKG+AR R+ G++PA+IYG +P I+L+ ++I+K +Y+ +F+TT+ Sbjct: 6 ELKAVARPRAGKGAARAERRAGRVPAVIYGEKQEPVTISLNFREINKTIYAGHFLTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ VIP+DYQLD V D +H DFL+VS+G+TVTV VPV F+N+ SP +K GG Sbjct: 66 IDVDGTKHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVTVEVPVHFLNQEASPALKAGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V L CPA +IP S+ VDL GD+ H+ I+LP + + T+AT+VA Sbjct: 126 LNVVAHAVELECPAESIPASVEVDLTGAAYGDTFHLSGIKLPAGVTWAGHGDDTLATVVA 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella silvestris BL2] gi|254801056|sp|B8EK41|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella silvestris BL2] Length = 227 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 122/182 (67%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R GKG+AR +R+ G+IP +IYG +PI L ++++K +Y+ +F+TT+ + Sbjct: 7 LAAAARHGTGKGAARSVRREGRIPGVIYGGGDPAEPITLDYRELNKLIYAGHFLTTLFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ VIP+DYQLDP+ D+ +H DFL++ G+++ V VPV F+N+ PG+K+GG + Sbjct: 67 DVAGTKQRVIPRDYQLDPIKDLPLHVDFLRLKPGASLKVEVPVHFLNQETCPGVKKGGSV 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 N+V H + L PA++IP++IT DL +L+I DS+H+ + LP+ + + + TI TI Sbjct: 127 NIVRHSIELRVPADDIPEAITADLGELEINDSLHLTALALPQGCRPTQRERDFTIVTITP 186 Query: 187 PI 188 P+ Sbjct: 187 PL 188 >gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum centenum SW] gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum centenum SW] Length = 205 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA +RD+ GKG+AR R+ G+IPA+IYGN P I+L + L+ F T + ++ Sbjct: 7 LSAELRDRAGKGTARQTRREGRIPAVIYGNKEKPVMISLEFNQFFRELHRPGFFTHLFSI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + V+P+D Q DPVSD +H DFL+VS + + V +PV F N SPGIK+GG L Sbjct: 67 TVDGATHRVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPVEFANGETSPGIKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 N+V HE+ + C A+NIP+ ITVDL D + SIH+ + LPE +++ + TIATI A Sbjct: 127 NIVRHEIEVFCRADNIPEHITVDLADADLNSSIHISAVALPEGVRPTIADRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] gi|171769611|sp|A7HVD8|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] Length = 216 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/165 (47%), Positives = 112/165 (67%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+K KG+ R LR+ G++PA+IYG+ P+ IA+S KD+S + FM+ +L + Sbjct: 7 LKAEAREKGSKGAVRSLRRAGRVPAVIYGDKQSPELIAVSYKDVSALYQTGTFMSHVLDV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +IG + VIP+D Q +PV D +IH DFL++ + +TVTV VPV F N SPGIK GG L Sbjct: 67 EIGGKTERVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHEASPGIKAGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 N+V HEV L+CPA+ IP+ + +DL ++G SIH+ ++LP K S Sbjct: 127 NIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHISAVKLPAKVS 171 >gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas wittichii RW1] gi|166223725|sp|A5V625|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1] Length = 207 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 78/180 (43%), Positives = 120/180 (66%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R++ GKG++R +R+ G++PA+IYG +P I + K + K L++ +F +++ L Sbjct: 7 LSAEARERAGKGASRAIRREGRVPAVIYGEKQEPASIHVEEKVLMKLLHTGHFFNSVVML 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+G + V +PKD Q PV+D +H DFL++ E + V V+VPV F +E SPG+K+GG L Sbjct: 67 DVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEHTKVNVNVPVHFKDEELSPGLKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 NVV H++ L A IP+ I + L L++G+SIH+ + LP+ S+ +ITIATIVAP Sbjct: 127 NVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIHLSQVALPKGASAQDHEDITIATIVAP 186 >gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia indica subsp. indica ATCC 9039] gi|226736280|sp|B2IG64|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia indica subsp. indica ATCC 9039] Length = 221 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 123/182 (67%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R GKG+AR +R+ G+IP +IYG P+PI L ++++K +Y+ +F+TTI + Sbjct: 7 LAATVRGGTGKGAARSIRREGRIPGVIYGGGDAPEPITLDYRELNKLIYAGHFLTTIFDI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ V+P+DYQLDPV +H DFL++ G+T+ V VP+ FIN + PG+K+GG L Sbjct: 67 EVEGAKQRVVPRDYQLDPVKGQPLHVDFLRLKPGATLKVSVPIHFINADICPGLKKGGTL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVA 186 N+V H + L PA+ +PD +T DL+ L+I +S+H+ I LPE S ++ + TIATIV Sbjct: 127 NIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSAITLPEGCSLVATDRDFTIATIVP 186 Query: 187 PI 188 P+ Sbjct: 187 PV 188 >gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] Length = 209 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A RD+ GKGSAR R+ G +PA+IYG+ DP I L+ +++ K L F + +L + Sbjct: 7 LGASARDRAGKGSARAARREGLVPAVIYGDKQDPVSINLTLRELEKLLTKPGFFSHLLDI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+P+D Q PVSD +H DFL+VS S +TV VPV F N+ SPG+++GG L Sbjct: 67 DVAGTKHRVLPRDLQQHPVSDKPLHVDFLRVSASSELTVDVPVEFENDEASPGLRRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 NVV H V + C A++IP+ IT+DL L+IGDS+H+ + LPE ++ + TIATI A Sbjct: 127 NVVRHSVEVYCRADSIPEKITIDLTGLQIGDSVHISAVTLPEGVRPTIEDRDFTIATIAA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium sp. 4-46] gi|226736339|sp|B0UGY1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium sp. 4-46] Length = 217 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F++T+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLSTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 + + IP+DYQLDPV D +H DFL+V G T+ V VPV F+N++ +PG+KQ G Sbjct: 67 AVDGRTIRAIPRDYQLDPVKDTPLHVDFLRVVSGQTIEVEVPVHFVNQDAAPGLKQKSGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H ++L + IPD++ VDL IGD++H+ D+ LP S + T+AT+V Sbjct: 127 LNVVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSDLVLPTGASLALAPSETVATLVP 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|288958834|ref|YP_003449175.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] Length = 198 Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 117/181 (64%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GKG+AR R++G+IPA+IYG P I+L + ++ L+ F T + + Sbjct: 7 LGAQTRERAGKGTARQTRRDGRIPAVIYGGKQAPVTISLEKFEFTRVLHQPGFFTHLFDV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + V+P+D Q PVSDI +H DFL+VS + + V VPV F ++ KS G+K+GG L Sbjct: 67 TVDGTAHRVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPVEFADQEKSAGLKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVA 186 N+V HE+ L CPA+NIP+ IT+ +GDSIH+ ++LPE SS ++ + TIATIVA Sbjct: 127 NIVRHELELSCPADNIPEHITISCEGFDVGDSIHISAVKLPEGVSSAITDRDFTIATIVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 167 bits (422), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 123/181 (67%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R++VGKG++R+LR+ G+ PA+IYG+ +P I + K +++ L + +F +I+ L Sbjct: 7 LSAETRERVGKGASRVLRREGRTPAVIYGDNQEPVAIHVEEKALARALGTGHFFNSIVEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +V +PKD PV+D HADFL+++ V V VPV FINE SPG+K+GG L Sbjct: 67 TVGGTVVRTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPVVFINEEASPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVA 186 N+V HE+ L+ ++IPD ITVD+ L++G SIH++DI +P ++ + + TIATIVA Sbjct: 127 NIVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAGVKVVTHEADATIATIVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21] gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21] Length = 230 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 125/181 (69%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GKG++R LR++G++PA+IYG +P I + AK++ K+L + +FM +I+T+ Sbjct: 7 LPAETRERAGKGASRALRRDGRVPAVIYGGKEEPILIHVEAKELVKQLGTGHFMNSIVTI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + + +PKD L PV+D H DF ++ +G + V VPV F NE SPG+K+GG L Sbjct: 67 ELGGKKIKTLPKDVSLHPVNDRPEHVDFFRMVKGGKIEVQVPVVFTNEEASPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVA 186 NVV HE+ L+C + IP I +D+ ++GDSIH+ +++LP + S+++ + TIAT+VA Sbjct: 127 NVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISEVKLPAGSESAITDRDFTIATLVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] Length = 212 Score = 164 bits (415), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 86/181 (47%), Positives = 121/181 (66%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R KVGKG+AR R+ G++PA+IYG+ P I L +I+K +Y+ +F+TT+ Sbjct: 6 ELKATARAKVGKGAARAERRAGRVPAVIYGDGKAPVGITLDHVEINKIIYAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DYQLDPV D +H DFL+V+ G+T+TV VPV F+N+ +P +KQGG Sbjct: 66 VDVDGQKHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLTVDVPVHFLNQETAPALKQGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LN+V H VSL PA IP++I VDL GDSIH+ I+LP + + T+ATI A Sbjct: 126 LNIVSHAVSLNVPAEAIPEAIEVDLTKYGFGDSIHLSAIKLPAGVTWAGHGDDTLATITA 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [polymorphum gilvum SL003B-26A1] gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1] Length = 200 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 82/182 (45%), Positives = 118/182 (64%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F+T I Sbjct: 6 ELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITVPIKESTLNLHKGGFLTHIGV 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ E VI KDYQL PV D L+H DFL+VS +T+TV +PV F+N+ PGIK+GG Sbjct: 66 IDVDGEKHQVIAKDYQLHPVRDELMHIDFLRVSANTTLTVDIPVHFLNQETCPGIKRGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN+V H V + PAN IP+ I +DL +GDS+H+ + LP+ +++ + TIATI Sbjct: 126 LNIVRHAVEMTVPANAIPEFIELDLAKADLGDSLHISAVALPKGCQPTITDRDFTIATIA 185 Query: 186 AP 187 AP Sbjct: 186 AP 187 >gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] Length = 205 Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R+ GK + R LR +P I+YG P +AL + + + + +F++T+ Sbjct: 6 ELKAQAREGTGKLANRALRAKKLVPGIVYGGEKGPANVALEYRHVWQHYQTGHFLSTVYL 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + VIP+D Q+DPV D IH DFL+VS+ S + V +PV F+NE SPG+K+GG Sbjct: 66 LDIDGKKERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIEVEIPVHFVNEEASPGLKRGGA 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIV 185 LN+V H V L CPA++IP+ ITVDL IGDSIH+ ++LP T +++ + T+ATI Sbjct: 126 LNIVRHAVELSCPADSIPEFITVDLTGYDIGDSIHISAVKLPAGITPTITDRDFTVATIA 185 Query: 186 A 186 Sbjct: 186 G 186 >gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc [Citromicrobium bathyomarinum JL354] Length = 226 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 129/181 (71%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A RD+ GKG++R LR+ G++PA+IYG +P PI + +++ ++L + +FM +I+ L Sbjct: 7 LPAETRDRAGKGASRALRREGRVPAVIYGGKEEPTPIHVEERELVRQLDTGHFMNSIIEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V +PKD L PV+D H DFL++++G+ V V VPV F++E +SPG+K+GG L Sbjct: 67 EVGGKKVRTLPKDVALHPVTDRPEHVDFLRLTKGAKVDVSVPVVFVDEEESPGLKKGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVA 186 NVV HE+ L+C A+ IP IT+ + ++GDSIH+ ++ LP+ + S+++ + TIAT+VA Sbjct: 127 NVVRHELELVCEADKIPGEITISVKGKEVGDSIHISEVDLPKGSESAITDRDFTIATLVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] Length = 211 Score = 157 bits (396), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 80/184 (43%), Positives = 119/184 (64%), Gaps = 1/184 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 +SA R++VGKGSAR R+ G +PA+IYG+ +P I +S ++I+K ++ +L + Sbjct: 7 ISAEQRERVGKGSARAARRAGLVPAVIYGDKKEPLGINMSTREITKIVHQPGIFGRLLEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + V+ +D Q PVSD ++H DFL+VS V V VPV FINE+ P +K GG L Sbjct: 67 VVDGKKSTVLTRDIQFHPVSDTILHMDFLRVSGSVKVAVGVPVEFINEDLCPALKIGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 NVV HE+ L CPA +IP+ I +DL+ LKIGDSIH+ I LP+ +++ + T+AT+ + Sbjct: 127 NVVRHEIELNCPATDIPEKIIIDLDGLKIGDSIHISAITLPDGVEPTITDRDFTVATLQS 186 Query: 187 PISG 190 P G Sbjct: 187 PGGG 190 >gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] Length = 205 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 116/181 (64%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD+VGKG++R LR+ G++PA+IYG I L K + K L + +F T+++ + Sbjct: 7 LAAETRDQVGKGASRSLRREGRVPAVIYGQNKAAASIHLEEKALVKALMTGHFFTSVIMV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D + L KD PV+D +H DFL++ E TVTV VPV F +E++S GIKQGG L Sbjct: 67 DGQRTLA----KDVAFHPVTDRPLHVDFLRIGEHETVTVAVPVVFTDEDESRGIKQGGVL 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIVA 186 NV HE+ ++ A +IP IT+ L L++GDSIH+ D++LP+ T ++ + IATIV Sbjct: 123 NVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISDVKLPKGATPAIDDRDFAIATIVP 182 Query: 187 P 187 P Sbjct: 183 P 183 >gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762455|ref|ZP_04760532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|68053039|sp|Q5NL76|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241372957|gb|EER62624.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 220 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 116/181 (64%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A RD+ GKG++R +R+ G +PA+IYG+ + I + + K L + +FM +++T+ Sbjct: 7 LLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAMGITVDHIALFKMLNTGHFMNSVVTI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + + IPKD Q PV+D ++H DFL+VS S V V +PV +++E KSPGIK GG L Sbjct: 67 DVDGQKLPTIPKDVQFHPVTDRVLHVDFLRVSANSLVEVAIPVSYVDEEKSPGIKLGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 N++ HE+ L A IP+ I V + L++GDSIH+ I+LPE + + T AT++A Sbjct: 127 NIIHHELKLKVKATAIPEEIVVSVAGLEVGDSIHLNQIKLPEGAELAHDEHESTAATVIA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum rubrum ATCC 11170] gi|109893389|sp|Q2RMV5|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170] Length = 210 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 114/182 (62%), Gaps = 2/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA RD+ GKG+AR R+ GQ+PA+IYG DP ++L+ + I + F + + L Sbjct: 7 LSAKGRDRAGKGAARATRREGQVPAVIYGGRQDPVLLSLAPRLIHTEMRKAGFSSRLFDL 66 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G E V+ +D Q PV+D+ IH DFL++ + + VTV +PV FINE SPG+K+GG Sbjct: 67 TVEGGETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAIPVHFINETASPGLKRGGV 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIV 185 LNVV HE+ + + +PD VDL ++GDSIH+ +++PE +++ + TI TI Sbjct: 127 LNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIPEGVRPVIAERDFTICTIA 186 Query: 186 AP 187 AP Sbjct: 187 AP 188 >gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] Length = 233 Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 119/181 (65%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+TTI Sbjct: 6 ELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEGAELRQRILAGRFLTTIFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + VIP+D+ LDPV D IH DF+++ EG+ + V VP+R + + +PG+K+GG Sbjct: 66 INLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + + C A NIP I D+ L+I S+H+ D+ LP ++++ ++T+ TIV Sbjct: 126 VNLVTHAIDIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTLAREDVTLVTIVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis L13] Length = 197 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 117/181 (64%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R+ +G G AR R++G +P ++YG+ + K I++ + I+K LY F + + L Sbjct: 7 IEAQPREALGTGGARATRRDGLVPGVVYGHNKENKFISIDPRSIAKELYKPGFFSRLFAL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KD QL PVSD +H DF++VS+ S + V++PV IN++K+PG+K+GG + Sbjct: 67 SVNGNTEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPVHVINDDKAPGVKKGGMV 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V H + ++CPA++IP I VDL + G ++H+ DI+LP ++ + + T+ +IVA Sbjct: 127 NIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQLPAGVVAAHPERDNTLVSIVA 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli IE4771] Length = 152 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/140 (49%), Positives = 100/140 (71%) Query: 51 ISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 ++KR+++ FMTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV Sbjct: 1 MTKRIHAGGFMTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPV 60 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FINE KS G+K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ Sbjct: 61 HFINEEKSQGLKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKG 120 Query: 171 TSSMSQLNITIATIVAPISG 190 +++ + TIATIVAP +G Sbjct: 121 VTTVIDRDFTIATIVAPAAG 140 >gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter winogradskyi Nb-255] gi|109893373|sp|Q3SPM6|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255] Length = 228 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 120/181 (66%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+TTI Sbjct: 6 ELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEEPELRQRILAGRFLTTIFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + VIP+D+ LDPV D IH DF+++ EG+T+ V VP+R + + +PG+K+GG Sbjct: 66 INLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + + C A +IP I D+ L+I S+H+ D++LP +++ ++T+ TIV Sbjct: 126 VNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPLAREDVTLVTIVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium japonicum USDA 110] gi|71153127|sp|Q89DJ8|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 117/181 (64%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++P +IYGN P I++ +++ +R+ + F+TT++ Sbjct: 7 ELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRFLTTLVD 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DY LDPV D IH DF+++ EG+T+ + VP+ + SPG+K+GG Sbjct: 67 IDLEGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + L C +IP I D+ L+IG S+H+ D++LP ++++ + T+ TIV Sbjct: 127 VNIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTREDATLVTIVP 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|83313447|ref|YP_423711.1| ribosomal protein L25 [Magnetospirillum magneticum AMB-1] gi|109893368|sp|Q2VZ23|RL25_MAGMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82948288|dbj|BAE53152.1| Ribosomal protein L25 [Magnetospirillum magneticum AMB-1] Length = 202 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 2/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F T + + Sbjct: 7 IAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGFFTQLFNV 66 Query: 68 DIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D+GK+ H+ + +D Q+ PV+D IH DF++VS + V VPV F NE KSPGIK+GG Sbjct: 67 DLGKDGKHLCLARDVQMHPVTDQPIHVDFMRVSADHAIHVKVPVHFTNELKSPGIKKGGV 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 LNV HE+ + C N+IP I +DL+ L+IG SIH+ D++LP T+A+I Sbjct: 127 LNVELHEIEITCSPNDIPHEILIDLDGLEIGASIHLSDLKLPAGAKPYHVASGATVASIA 186 Query: 186 AP 187 AP Sbjct: 187 AP 188 >gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] Length = 210 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 1/178 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS +R++ G G AR R+NG +P ++YG P IAL ++ K + S F+ ++T+ Sbjct: 6 LSVEVRERTGTGGARETRRNGFVPGVLYGGDKGPVSIALKNNEVIKAINSGKFLAQMITI 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D E V+ +D Q PV D +H DF +V E + +TV V V F N+ KSPG+K+GG L Sbjct: 66 DHKGEKQSVLTRDVQFHPVRDEPVHIDFQRVDESTIITVEVTVHFHNDEKSPGLKRGGVL 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATI 184 NVV H V + PA +IPD I VDL+ IGDSIH+ + LPE T +++ + TIATI Sbjct: 126 NVVRHAVEVNVPAGSIPDQIDVDLSGYDIGDSIHISAVTLPEGVTPAITDRDFTIATI 183 >gi|46201115|ref|ZP_00055742.2| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 202 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 111/182 (60%), Gaps = 2/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F T + + Sbjct: 7 IAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGFFTQLFNV 66 Query: 68 DIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D+GK+ H+ + +D Q+ PVSD IH DF++VS + V VPV F NE KSPGIK+GG Sbjct: 67 DLGKDGKHLCLARDVQMHPVSDQPIHVDFMRVSADHAIHVKVPVHFTNEAKSPGIKKGGV 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 LNV HE+ + C +IP I +DL+ ++IG S+H++D++LP T+A+I Sbjct: 127 LNVELHEIEITCSPEDIPHEILIDLDGMEIGASVHLKDLKLPAGAKPYHVASGATVASIA 186 Query: 186 AP 187 AP Sbjct: 187 AP 188 >gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter hamburgensis X14] gi|122417117|sp|Q1QIV7|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14] Length = 233 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 118/181 (65%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++P +IYGN P+PI++ ++ +R+ + F+TT+ Sbjct: 6 ELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPQPISVEEPELRQRILAGRFLTTVFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + + VIP+D+ LDPV D IH DFL++ EG+T+ V +P+R + + +PG+K+GG Sbjct: 66 ISLEGKKHRVIPRDFHLDPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + + C A++IP I D+ L++ S+H+ D+ LP +++ ++T+ TIV Sbjct: 126 VNLVIHAIDVECAADDIPQFIEADVGGLEMSHSLHLSDVELPPGVKPLAREDMTLVTIVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] Length = 242 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 110/184 (59%), Gaps = 1/184 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R++G +PA+IYGN P+ I L ++ K++ +F +T + L Sbjct: 7 LKATARPRAGKGAARQARRDGNVPAVIYGNQETPETINLEYNELWKQVLRGHFTSTAIEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+ +D Q+DP+ D +H DF +V + + V +P+ F+NE SPG+K+GG L Sbjct: 67 DVEGTKHIVLARDVQVDPIRDTPLHVDFQRVGKDGVIRVSIPMHFVNETLSPGLKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V H+V + P + IP ++L L+IG SIH+ + +PE T + + TIATI Sbjct: 127 NIVRHDVEVFAPYDKIPRFFEINLEGLEIGRSIHISAVNMPEGVTPVIKNRDFTIATIAG 186 Query: 187 PISG 190 + G Sbjct: 187 ALKG 190 >gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris HaA2] gi|109893387|sp|Q2ISF7|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2] Length = 240 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/182 (41%), Positives = 114/182 (62%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K GKG+AR R+ G++P +IYG+ P PI++ KD+ R+ + F+TTI Sbjct: 5 MEFKATARPKSGKGAARAERRAGRVPGVIYGDNKPPLPISVEDKDLRLRIQAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D +H DFL++ EG+T+ + VP+ +PG+K+GG Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA+ IP I D++ L IG S+H+ DI LP+ S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVKSVSREDVTLVTIV 184 Query: 186 AP 187 P Sbjct: 185 PP 186 >gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc [Dinoroseobacter shibae DFL 12] gi|189042354|sp|A8LRY8|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dinoroseobacter shibae DFL 12] Length = 211 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R++G +P ++YG +DP+PI + ++ +RL + FM T+ L Sbjct: 8 LVAEPRAGTGKGAARQARRDGYVPGVVYGGGADPQPIQIKFNELLRRLKAGRFMATLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI ++ Q D V D+ H D +++ S V + +PV FINE +PGIK+GG Sbjct: 68 KVEGQEDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLFIPVEFINEGAAPGIKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V EV L A +IP+SITVDL L IGD++ + + LPE + + IA I A Sbjct: 128 LTAVRPEVELRVTAGDIPESITVDLTGLDIGDTVTISSVTLPEGATPTIDRDFVIANIQA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] Length = 229 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 75/182 (41%), Positives = 115/182 (63%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TTI Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEEKELRLRILAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D +H DFL++ G+T+ + VP+ +PG+K+GG Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPLHVDFLRLGAGATIRISVPLHLKGLEVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA+NIP I D+++L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPADNIPQFIEADVSNLDIGVSLHLSDIALPTGVKSVSREDVTLVTIV 184 Query: 186 AP 187 P Sbjct: 185 PP 186 >gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris CGA009] gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris TIE-1] gi|68053168|sp|Q6N1P8|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; AltName: Full=RRP-L25 gi|226736356|sp|B3Q7X4|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009] gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris TIE-1] Length = 230 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 113/182 (62%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TT+ Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQSPLPISVEEKELRLRILAGRFLTTVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+K+GG Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA NIP I D++ L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDDVTLVTIV 184 Query: 186 AP 187 P Sbjct: 185 PP 186 >gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] Length = 204 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R++ GKG+AR R+ G +PA+IYG+ + I L K+ + L+ F++ + T Sbjct: 6 ELKAQVRERAGKGAARAARREGLVPAVIYGDKKEAVSINLPLKEATMTLHKGGFLSHVGT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ E VI KD+QL PV D L+H DFL+VS +T+TV +PV+F+NE SPG+K+GG Sbjct: 66 IDLNGEKTSVIAKDFQLHPVKDTLMHVDFLRVSADATLTVEIPVKFLNEETSPGLKRGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LNVV H V + PA IP++I VDL + +G S H+ ++LP + +++ + TI+TI Sbjct: 126 LNVVRHTVEMTVPATAIPEAIEVDLAEADLGSSQHISAVKLPAGCAPTITDRDFTISTIA 185 Query: 186 AP 187 AP Sbjct: 186 AP 187 >gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] Length = 215 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A+ R GKG+AR R++G +P I++G DP PI + ++ KRL + F +T+ L Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVFGGDKDPLPIQIPFNELFKRLKAGRFKSTLWNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G E V VI +D Q D V D+ H D +++ S + +++PV FINE +PGIK+GG Sbjct: 68 KVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIALYIPVEFINEEAAPGIKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+C A +IP+ ITVDL L I D + + + LP T + IA I A Sbjct: 128 LTVVRPEVELVCTAGDIPEKITVDLTGLNINDVVTISSVELPNGTQPTIDRDFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB5] gi|123721572|sp|Q131L9|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5] Length = 234 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/182 (41%), Positives = 113/182 (62%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TT+ Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEDKELRLRILAGRFLTTVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+K+GG Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA +IP I D++ L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSREDVTLVTIV 184 Query: 186 AP 187 P Sbjct: 185 PP 186 >gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37] gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37] Length = 209 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R++G +P I++G +P I + + KRL F +T+ L Sbjct: 8 LQAQERTGTGKGAARAARRDGMVPGIVFGGDKEPLAINIPFNVLLKRLKQGRFKSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G E V VI +D Q D V D+ H DF+++ S V + +PV FINE +PGI++GG Sbjct: 68 QVEGHEDVRVICRDVQRDIVKDLPTHVDFMRLRRTSKVNLFIPVEFINEETAPGIRKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+ A +IP+ + VDL +++IGD +H+ D+ LPE + + N IA I A Sbjct: 128 LTVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDVTLPEGSKATIDRNFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25/general stress protein Ctc [Maricaulis maris MCS10] gi|122316567|sp|Q0ARN7|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10] Length = 215 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 1/178 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +R+ GKG+AR R+ +P I+YG DP + L +I K L +F++ ++ + Sbjct: 7 LTVDVREGTGKGAARAARREDLVPGIVYGGKLDPVSVTLRGNEIRKALLGGHFLSNMIEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D + VI +D Q PVSD +H D +V E + + V+V V F NE+ P +K+GG L Sbjct: 67 DHKGKRQTVIARDIQFHPVSDKAMHIDLYRVDEDTKINVNVAVNFTNEDACPALKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATI 184 N+V H+V LLCPA +IP+S+ DL L IGDS+H+ I+LP+ +++ + T+AT+ Sbjct: 127 NIVRHDVELLCPAGSIPESVEADLTGLDIGDSLHISAIKLPKGVVPTITDRDFTVATL 184 >gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis excentricus CB 48] gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis excentricus CB 48] Length = 195 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 103/179 (57%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R++ G G AR R G++P I+YG P IA+ + K LY+ ++TL Sbjct: 6 LDVEIRERTGTGGARATRNEGKVPGILYGGDKAPVAIAVKLNEFRKALYTGKLAGHLVTL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G+E VI K PV+D+ +H D +V E T+ ++VPV F N SPGIK+GG L Sbjct: 66 KYGEETQKVIAKAIDFHPVTDVPVHFDLYRVDETQTIKINVPVHFKNHEASPGIKKGGAL 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V HE+ + PA +IP+ + VDL+ L IG S+H+ D+ LP +++ ++ IA+I A Sbjct: 126 TVAFHELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSLPSDVTAVPGKDVVIASITA 184 >gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides 2.4.1] gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17029] gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides KD131] gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] gi|109893390|sp|Q3IZM8|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223710|sp|A3PMM1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801059|sp|B9KMG3|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1] gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029] gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131] gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] Length = 203 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R GKG+AR R+ G +P I+YG +P I + D+ RL F+ T+ L Sbjct: 8 FQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVPYNDLLNRLKKGRFLQTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI + Q D V D+ H DF+++ S V + + V F N +K+PG+K+GG Sbjct: 68 KVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRVNLFIHVTFENHDKAPGLKRGGT 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L A +IPD +TVDL D +IGD IH+ DI+LPE N IA I A Sbjct: 128 LTVVRPEVELEVTAGDIPDHLTVDLTDRQIGDVIHINDIKLPEGAVPTINRNFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|197106324|ref|YP_002131701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] gi|226736347|sp|B4R8Q7|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] Length = 208 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 105/180 (58%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R++ G G AR R++G +P ++YG DP IA+ A + K LY+ + + Sbjct: 3 EIVLNVEVRERTGTGGARDTRRSGMVPGVLYGGDKDPVAIAVRANEFRKALYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K + PV+D H D +V E + + VPV F N++ SPG+K+G Sbjct: 63 VTLKYGNETQPVIAKAVDMHPVTDEPQHFDLYRVDEHQQIKIEVPVHFTNQDDSPGLKRG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G LNV H +++ CPA++IP+ I DL L+IG +I + D++LP K + +A++ Sbjct: 123 GTLNVALHTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKLPAKAEAAVDGETVVASV 182 >gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia baltica ATCC 49814] gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia baltica ATCC 49814] Length = 209 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +R++ GKG +R R+ ++PAI+YG P I+L +I K L + F++ ++ + Sbjct: 7 LNVELRERTGKGGSRQARRENRVPAILYGGKEAPVSISLDRIEILKALNTGKFLSNLVEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + VIP+D Q PV+++ +H D +V E V V VPV F E+ SPGIK+GG L Sbjct: 67 EHKGKKQFVIPQDVQFHPVTEVALHVDLYRVKEDQLVKVEVPVHFTGEDVSPGIKRGGSL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITIATIVA 186 N+V H V L PA +IP+ +T D++ L IGD++ + +I LP + T +++ + TIATIV Sbjct: 127 NIVRHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIELPKDATPTITDRDFTIATIVG 186 >gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] Length = 198 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 106/182 (58%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L +R++ G G AR R +G++P ++YG P PIA++ K L + + Sbjct: 3 EIVLDVEVRERTGTGGARATRNDGKLPGVLYGGDKGPVPIAVNLNAFRKSLSTGKLNGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI K PV+D+ +H D +V E + + + VPV F N SPG+K+G Sbjct: 63 VTLKYGEETQKVIAKSIDFHPVTDVPVHFDLFRVDEHAKIRISVPVHFKNHELSPGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G LNV HE+ + PA++IP+ I +DL L+IG S+H+ D++LP S +++ +A++ Sbjct: 123 GALNVAFHELEIQVPADHIPEDIIIDLTGLEIGQSVHISDLKLPSDVSPVAKGLTVVASV 182 Query: 185 VA 186 A Sbjct: 183 TA 184 >gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] Length = 203 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 1/188 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LS +R GKG+AR R+ G +P I+YG+ +P+ I + + KRL + F Sbjct: 1 MTGKIPDLSVEVRMGTGKGAARQARREGYVPGIVYGDGKEPQAINVKYYTLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I G++ V VI + Q D V D+ H DF+++ + S V + + V FIN SP Sbjct: 61 LQTLFNLKIEGQDDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHVTFINHEASP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD ITVDL IGD IH++D+ LPE + N Sbjct: 121 GLKRGGALVVVRPEVELEVTAGDIPDHITVDLAGRNIGDVIHIQDVVLPEGAAPTIDRNF 180 Query: 180 TIATIVAP 187 IA I AP Sbjct: 181 VIANISAP 188 >gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] Length = 231 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 109/181 (60%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD VG GSAR R+ G +P ++YG P +A++ KD K LY+ + + Sbjct: 24 EIILNVDVRDGVGTGSARAARRAGFVPGVLYGGDKAPVAVAVNEKDFRKSLYTGKLLGHL 83 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI KD Q DPVSD +H D ++V + + + + VPV F N + +P ++QG Sbjct: 84 VTLKYGEETQPVIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEVPVYFKNADDAPFVRQG 143 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIAT 183 G L VV H V ++ A++IP+ + VDL ++GD+I DI LP+ +++ + IAT Sbjct: 144 GSLEVVRHAVEIMVKADSIPEELVVDLIKSQMGDTIRFSDIELPKGVEPTITDRDFVIAT 203 Query: 184 I 184 I Sbjct: 204 I 204 >gi|209886302|ref|YP_002290159.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] gi|226736343|sp|B6JIP4|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] Length = 240 Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 116/181 (64%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+TT+ Sbjct: 6 ELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQSIFAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DY LDPV D +H DFL++ EG+T+ V VP+ SPG+K+GG Sbjct: 66 IDLDGQKYRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAELSPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L ++IP I VD++ L+I +S+H+ D+ LP+ + + +T+ T+V Sbjct: 126 VNIVNHTVELEAEVDHIPQFIEVDVSKLEINNSVHLNDVALPKGVKPVLREGMTLVTVVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] Length = 242 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 117/181 (64%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+TT+ Sbjct: 6 ELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQNIFAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DY LDPV D +H DFL++ +G+T+ V VP+ SPG+K+GG Sbjct: 66 IDLDGQKHRVIPRDYSLDPVKDFPLHVDFLRLGKGATIRVSVPLHVKGAEVSPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L IP I VD++ L+I +S+H+ D++LP+ +S+ ++T+ T+V Sbjct: 126 VNMVNHTVELEADVEQIPQFIEVDVSKLEINNSLHLSDVQLPKGVKPVSRDDVTLVTVVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisA53] gi|122297068|sp|Q07RP7|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53] Length = 234 Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 116/182 (63%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R VGKG+AR R+ G++PA+IYG+ P I+L +++ R+ + F+TT++ Sbjct: 6 ELKATARPSVGKGAARAERRAGRVPAVIYGDNKPPVTISLEDRELRLRILAGRFLTTVVD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ VIP+D+ LDPV D +H DFL++ EG+T+ V VP+ N +PG+K+GG Sbjct: 66 LDLDGTKHRVIPRDFHLDPVRDFPVHVDFLRLGEGATIRVSVPLHLKNSETAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATIV 185 +N+V H V L A++IP I D+ L IG S+H+ D+ LP+ + ++ ++T+ TIV Sbjct: 126 VNIVTHTVDLEAEADSIPQFIEADIGTLDIGTSLHLSDVVLPKGVKLVAAREDVTLVTIV 185 Query: 186 AP 187 P Sbjct: 186 PP 187 >gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|68053024|sp|Q5FFA2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053028|sp|Q5HC84|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 208 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 3 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + G+ Sbjct: 63 THLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGV 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNIT 180 K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP E T M + N T Sbjct: 123 KKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPT 182 Query: 181 IATI 184 + TI Sbjct: 183 LVTI 186 >gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Gardel] gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel] gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 219 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 14 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALS 73 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + G+ Sbjct: 74 THLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGV 133 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNIT 180 K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP E T M + N T Sbjct: 134 KKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPT 193 Query: 181 IATI 184 + TI Sbjct: 194 LVTI 197 >gi|254500889|ref|ZP_05113040.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] gi|222436960|gb|EEE43639.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] Length = 176 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 33 IIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIH 92 +IYG+ PI + K+ + L+ F+T I T+D+ E VI KD+QL PV D ++H Sbjct: 1 MIYGDKKPALPITIPVKETTLTLHKGGFLTHIGTIDVDGEKHQVIAKDFQLHPVRDDVLH 60 Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DFL+VS +T+TV +PV FINE PG+K+GG LNVV H V L+ PAN IP+++ DL Sbjct: 61 VDFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELIVPANAIPETLVFDLA 120 Query: 153 DLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVAPISG 190 + IGD++H+ LPE +++ + T+AT+ AP G Sbjct: 121 KVDIGDTLHISATTLPEGAQPTITDRDFTVATLAAPGGG 159 >gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] Length = 236 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R+ +G G AR R++G +P I+YG P I+++ KD K LY+ + + Sbjct: 3 EIILNVDVRENIGTGGARAARRSGAVPGILYGGDKAPVAISVNEKDFRKNLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI KD Q DPVSD +H D ++V T+ + VP+ FINE++ +QG Sbjct: 63 VTLKYGDETQSVIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEVPIHFINEDQCKAFRQG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIAT 183 G L +V H V +L A++IP+ + VDL K+GD++ D+++P ++++ + I + Sbjct: 123 GTLEIVRHSVEILVRADHIPEDLVVDLAGHKLGDTLRWSDVKVPSDVEATITDRDFVIGS 182 Query: 184 I 184 I Sbjct: 183 I 183 >gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] Length = 212 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + G G +R +R++G +PA++YG +P I L + K + + + + + Sbjct: 12 RQRAGTGGSRAVRRDGWVPAVLYGGDEEPLNIKLRYNQVLKAYQTGRLIDVLAKIKLEGG 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 VI +D Q+DPV D+ H D ++V + VTV+VP+RF+NE PG+K+GG LN+V H Sbjct: 72 EQQVIGRDIQVDPVKDLPRHVDLMRVDARTKVTVNVPMRFLNEETCPGLKKGGVLNIVRH 131 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVAP 187 EV ++ A NIP+++ DL +GD+IH+ ++LP+ T +++ + T+ATI AP Sbjct: 132 EVEVVASATNIPEALEADLAGADVGDTIHISAVKLPDGVTPTITDRDFTVATIAAP 187 >gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] Length = 199 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 103/182 (56%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD G G+AR +R+ G+IP ++YG P IA+ A + K LY+ + + Sbjct: 3 EIILNVEVRDGSGTGAARAVRREGKIPGVLYGGGKAPVNIAVRANEFRKSLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K Q PV+D +H D +V E + + VPV F N + S G+K+G Sbjct: 63 VTLQHGDEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHDISVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V+ H V L CPA+ IP+ + +DL IGD+I + +++LPE + IAT+ Sbjct: 123 GSLEVIRHTVELACPADKIPEELVIDLASHDIGDTIRISEVKLPEGVKPAVDRDFVIATL 182 Query: 185 VA 186 A Sbjct: 183 KA 184 >gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus denitrificans PD1222] gi|166223701|sp|A1B9E9|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222] Length = 208 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 110/181 (60%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G++P I+YG+ +P+PI + + +L + FM+T+ L Sbjct: 8 LVAEARAGTGKGAARQARREGKVPGIVYGDGKEPQPIQIEFNSLLTKLRAGRFMSTLWNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G++ V V+ + Q D V D+ H DF+++ + V + + V F N++++PG+K+GG Sbjct: 68 KVEGQDDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHVNFENQDEAPGLKRGGT 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+ A++IP+ ITVDL +IGD+IH+ D+ LP+ N IA I A Sbjct: 128 LVVVRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDVVLPKGVKPTIDRNFVIANIAA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17025] gi|166223711|sp|A4WPE3|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025] Length = 203 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R GKG+AR R+ G +P I+YG +P I + D+ RL F+ T+ L Sbjct: 8 FQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVKYNDLLNRLKKGRFLQTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI + Q D V D+ H DF+++ S + + + V F N +++PG+K+GG Sbjct: 68 KVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRINLFIHVTFENHDQAPGLKRGGT 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L A +IPD ITVDL +IGD IH++DI LPE N IA I A Sbjct: 128 LTVVRPEVELEVTAGDIPDHITVDLTGKQIGDVIHIQDIALPEGAVPTINRNFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] Length = 232 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 113/181 (62%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R+ KG LR NG +PAIIYG + + I++S K + + +NF++ I+TL Sbjct: 4 LNANIRNTKTKGELSALRNNGNVPAIIYGGEAQNEKISISKKLLKSLIEKENFLSNIVTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+PK+ + +SD IH DFL+V G + + VPV+FIN KSPG+K+GG L Sbjct: 64 NVDGKSQNVLPKEIKYHIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVA 186 N+V +V L CP+ IP+S+ +DL+ + IG+S + I+L ++ + IAT+ A Sbjct: 124 NIVRRKVELRCPSEKIPESLVIDLDGIDIGESFKISSIKLETDVEPTIRGRDFVIATLAA 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB18] gi|109893388|sp|Q219F9|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18] Length = 240 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 113/181 (62%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R GKG+AR R+ G++P +IYG+ P I++ ++ R+ + F+TTI Sbjct: 6 ELKATARPAGGKGAARAERRAGRVPGVIYGDNKPPVTISVDDTELRARILAGRFLTTIFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + VIP+D+ LDPV D IH DFL++ EG+ + V VP+ N +PG+K+GG Sbjct: 66 VELDGQKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHLKNAEGAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L A +IP I D++ L IG S+H+ D+ LP+ ++S+ ++T+ TIV Sbjct: 126 VNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVKTLSREDLTLVTIVP 185 Query: 187 P 187 P Sbjct: 186 P 186 >gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] Length = 204 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R GKG+AR R++G++P I+YG DP+ I + + L FM+T+ L Sbjct: 8 LNAKVRAGTGKGAARQARRDGEVPGIVYGGGIDPQSINIPFNYLLTTLRKGRFMSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G++ V V+ + Q D V D+ IH D +++ S V + +PV FIN + PGIK+GG Sbjct: 68 KVEGQDDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVNLFIPVEFINGDTCPGIKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV +EV + A +IPD +TVDL + ++GD IH+ D+ LPE + N IA I A Sbjct: 128 LTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDVTLPEGAKPVIDRNFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|190571325|ref|YP_001975683.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226694585|sp|B3CMB8|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 203 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD K + + LR+ G IPA+IYG D + LSAK+ +K+ S Sbjct: 1 MAQQEMVTINAELRDVKKKKAMQALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI + + + +D Q V D + H DF V +GS + + +P+ FINE+KSP Sbjct: 61 LSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINESKSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQL 177 GIK GG LNV+C +++ C IP I +DL+ IG SIH+ D++LPE K + + Sbjct: 121 GIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|68053026|sp|Q5GTJ0|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 204 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 5/194 (2%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + R LRK G IPA++YG + + LSAK+ +K+ Y Sbjct: 1 MTQQEMITINAELRDVTKTKAIRSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQ-YKLG 59 Query: 60 FMTT-ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F++ ++ LDI + + + +D Q V D + H DF V +GS + + +P+ F+NE+KS Sbjct: 60 FLSAHVIELDISGKKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKS 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQ 176 PGIK GG LNV+C +++ C + IP +I VDL+ IG S+H+ D++LP K ++ + Sbjct: 120 PGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEE 179 Query: 177 LNITIATIVAPISG 190 N T+ TI A SG Sbjct: 180 ENFTVVTISAADSG 193 >gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] Length = 205 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R+ VG G AR R+ G +P ++YG P I+++ ++ K LY+ + + Sbjct: 3 EIILNVDVRENVGTGGARAARREGAVPGVLYGGDKAPVAISVNEREFRKSLYTGKLIGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL GKE VI KD Q DPVSD +H D ++V + + +PV F+N +++P +QG Sbjct: 63 VTLKYGKETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIEIPVAFVNADEAPYTRQG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIAT 183 G L VV H V ++ A+ IP + VDL +IG++I + DI+LPE + +++ + IA Sbjct: 123 GMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQLPEGAAPTITDRDFMIAA 182 Query: 184 I 184 I Sbjct: 183 I 183 >gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter crescentus NA1000] gi|71153131|sp|Q9AAV8|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801041|sp|B8GZU9|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000] Length = 197 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 100/182 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD G G+AR R+ G++P ++YG P IA+ A + K LY+ + + Sbjct: 3 EIILNVEVRDGAGTGNARATRRAGKVPGVLYGGGKAPVNIAVKANEFRKSLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI K Q PV+D +H D +V E + + VPV F N S G+K+G Sbjct: 63 VTLQYGEEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V+ H V L CPA+ IP+ + +DL IGD I + +++LPE + IA + Sbjct: 123 GTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGVKPAMDRDFVIANV 182 Query: 185 VA 186 A Sbjct: 183 KA 184 >gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] Length = 204 Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 101/168 (60%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ L A RD GKG++R LR+ G+IPAI+YG P+ + + +I K L + F Sbjct: 1 MSQETFALDAARRDDQGKGASRRLRREGRIPAIVYGGDEAPQSVTILHNEILKHLEHEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I + VI +D P +++HADF +VS ++ V VP+ F+N+ S G Sbjct: 61 YSHVLELNIDGKTSKVILRDLHRHPYKPLIMHADFQRVSANQSLRVTVPLHFLNKETSVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 K GG +NV+ E+ + C AN +P+ I VD+ DL IG SIH+ I++P Sbjct: 121 AKAGGIVNVILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQIKMP 168 >gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii RML369-C] gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] gi|109893391|sp|Q1RI71|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223713|sp|A8GVL5|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C] gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] Length = 202 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R++ G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAKSRNEFGTGAARALRREGRVPAIIYGAKKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIEGTQYKVLPKAVELHPVTDIVRHVDFVFL-EDKTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S+ ++LPE S ++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKVKLPEGCSFTTKKEFVLATIIG 184 >gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont of Drosophila melanogaster] gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] gi|71153674|sp|Q73II9|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801068|sp|C0R595|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] Length = 203 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE K + + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|126727672|ref|ZP_01743504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] gi|126703088|gb|EBA02189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] Length = 217 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 2/193 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L+ +R GKG+AR R++G +P +YG DP I + + KRL + F Sbjct: 1 MAGKIPDLNVSVRTGTGKGAARQSRRDGNVPGTVYGGGQDPIAIEIPFNALFKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I G+E V V+ +D Q D V D+ IH D +++ S V + + V FIN +SP Sbjct: 61 LATLFNLKIEGQEDVRVVCRDVQRDKVKDLPIHLDLMRLRRDSRVAMSITVEFINHEESP 120 Query: 120 GI-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ QGG LN V EV L A++IPD ITVDL L +G +I + DI LP+ + + Sbjct: 121 GLANQGGSLNTVRPEVELSVIASDIPDHITVDLAGLNVGATISISDIDLPKGAEPTIERD 180 Query: 179 ITIATIVAPISGS 191 IATI AP S Sbjct: 181 FIIATIAAPGGAS 193 >gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia prowazekii str. Madrid E] gi|6225985|sp|Q9ZCV3|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii] gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii Rp22] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAKSRTEFGTGAARALRREGRVPAIIYGAGKTPISISLKEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VP+ + + ++ G+K+GG Sbjct: 66 LTIDKKQYKVLPKAVELHPVTDIVRHVDFVFL-EAKTQKMEVPIVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N++ V LLC NNIP ++T+D+ ++ IG S+ + LP+ S +++ +ATI+ Sbjct: 125 FNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGCSFITKKEFVLATIIG 184 >gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. BTAi1] gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1] Length = 201 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 100/155 (64%) Query: 33 IIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIH 92 +IYG+ P PI++ +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH Sbjct: 1 MIYGDNQPPLPISVEDRELRQRILAGRFLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIH 60 Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DF+++ +G+T+ V VP+ + +PG+K+GG +N+V H + L C A NIP I D++ Sbjct: 61 VDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVS 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 L+I S+H+ D++LP ++S+ + T+ TIV P Sbjct: 121 ALEINHSLHISDVKLPTGVKTLSREDATLVTIVPP 155 >gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 203 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +R+ + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRNVTKTKAVHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE K + + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia felis URRWXCal2] gi|75536799|sp|Q4UMK5|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2] Length = 203 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G++R LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAKSRTEFGTGASRALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S ++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFTTKKEFVLATIIG 184 >gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] gi|166223714|sp|A8EY64|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] Length = 204 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAQSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEEKKQ-KMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S++ I LP+ S S+ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKIVLPKGCSFASKKEFVLATIIG 184 >gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] Length = 199 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 100/181 (55%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG+AR R+ G++P I+YG+ +P I L + RL F++T+ L Sbjct: 8 LVAEVRTGTGKGAARAARREGKVPGIVYGDGKEPLAINLDYNKLLTRLRKGRFLSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 I G++ V VI + Q D V D+ H DF++ S + + + V F N SPG+K+GG Sbjct: 68 HIEGQDDVRVICRGVQKDVVKDLPTHIDFMRTHRASRINLFIHVNFDNAEASPGLKRGGT 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V EV L A +IPD ITVDL IGD IH+ DI LPE N +A I A Sbjct: 128 LTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHINDIPLPEGCKPTIDRNFVVANIAA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma phagocytophilum HZ] gi|109893343|sp|Q2GII5|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma phagocytophilum HZ] Length = 211 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 MD ++ K+ A +R++ G GSAR LR G IPA+IYG DP I+LS D K+ + Sbjct: 1 MDHEDMIKVDASVRERCGTGSARALRARGLIPAVIYGKNRDPINISLSQVDFLKKCRTFP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L IG++ +VI KD Q PVS + H DF V + + + + VP+ F+NE K Sbjct: 61 IFSKLIELCIGEKKEYVITKDIQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNEQKCV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLN 178 G+K+GG +N++ + + C ++IP S+ VDL D+ IG S+H+ D++LP + M + + Sbjct: 121 GVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVMKEED 180 Query: 179 ITIATIVAPISG 190 IAT+VA G Sbjct: 181 PVIATVVASGGG 192 >gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia typhi str. Wilmington] gi|71153659|sp|Q68WD3|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington] Length = 203 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAKSRTEFGTGAARALRREGRVPAIIYGAGKIPISISLEEKEITKYYRRPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKQYKVLPKAVELHPVTDIVRHVDFVFL-EAKTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N++ V LLC NNIP ++T+D+ ++ IG S+ +++LP S +++ +ATI+ Sbjct: 125 FNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEVKLPIGCSFVTKKEFVLATIIG 184 >gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] Length = 221 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R GKG+AR R++G +P I+YG +DP+ I + + +L FM+T+ L Sbjct: 8 LNAKVRAGTGKGAARQARRDGDVPGIVYGGGADPQSIIIPFNYLLTKLRKGGFMSTLHNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 I G+E V VI + Q D V D+ H D +++ S V + +PV F+N PG+K+GG Sbjct: 68 KIEGEEDVRVICRGVQRDVVKDLPTHIDLMRLKRTSRVNIFIPVEFLNAETCPGVKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-KTSSMSQLNITIATIV 185 L VV +EV L A +IP+ I +DL +++IGD+I + D+ LPE T +++ + IA + Sbjct: 128 LTVVRNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDVTLPEGATPAITDRDFVIANVQ 187 Query: 186 AP 187 AP Sbjct: 188 AP 189 >gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] Length = 221 Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 2/177 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GK 71 R GKG+AR R++G +P ++YG +P+ I + + K+L FM+T+ L + G Sbjct: 13 RAGTGKGAARQARRDGLVPGVVYGGGEEPQAITIPFNILFKKLKDGGFMSTLFNLKVEGS 72 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 + V + + Q V D+ H DFL++ S + +++PV F+NE S G+K+GG L +V Sbjct: 73 DDVRAVCRGVQRHVVKDLPTHIDFLRLKRDSRINMNIPVHFLNEETSAGLKKGGTLTIVR 132 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVAP 187 EV L+ A NIPD I DL +L+IG++I++ DI LPE T ++ + IA I AP Sbjct: 133 AEVELMVTAGNIPDYIEADLENLEIGETINISDITLPEDTRPVIADRDFVIANIAAP 189 >gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] Length = 203 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H D V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDLQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE K + + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|330813694|ref|YP_004357933.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] Length = 237 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 112/188 (59%), Gaps = 1/188 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ L A +R+ K + LR +G +P ++YG++ +A+ + K L NF Sbjct: 1 MENNLTSLEANIRETKTKSDIKKLRIDGFVPGVLYGDVETNFKLAVKKNALEKLLKIGNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 M+T++ + + + V+P+D + + +++ IH DF ++S G+ V V +PV+FINE+ PG Sbjct: 61 MSTVIDIKVAGKEYKVLPRDIEFNKLTNQPIHVDFQKISAGTKVVVWIPVKFINESICPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K GG LN+V +V L CPA+ IP + DL + ++ +SIH+ I+LPE ++ + Sbjct: 121 LKMGGVLNIVRRKVELNCPADQIPAELVCDLGEKQLNESIHISSIKLPENVKPTILDRDF 180 Query: 180 TIATIVAP 187 TIAT+ AP Sbjct: 181 TIATVAAP 188 >gi|239948215|ref|ZP_04699968.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] gi|239922491|gb|EER22515.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] Length = 203 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG I+L K+I+K F++ ++ Sbjct: 6 ELEAKSRVEFGTGAARALRREGRVPAIIYGAGKTSVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFIFLEE-KTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSLKIELPKGCSFVTKKEFVLATIIG 184 >gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] Length = 203 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDPVQHGDFQFDVKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE K + + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] Length = 229 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A RD G G++R LR+NG++P I+YGN D I L +K + ++ + + F +IL L Sbjct: 5 VTAEKRDVKGTGASRRLRRNGKVPGILYGNHKDAVSIVLDSKTLHQQFHKEAFHASILEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 V+ +DYQL+PV ++H DF +V++ + V+VP FINE+ + G+K +GG Sbjct: 65 STDGTKESVLLRDYQLEPVKGTILHVDFQRVNQNEKIHVNVPFHFINEDIAKGVKLEGGV 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIAT 183 ++ + EV + C ++P I VDL DL +G+S+H+ ++ LPE T+ + + I + Sbjct: 125 ISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVHLSELNLPEGVELTALTEENDPAITS 184 Query: 184 IVAP 187 IV P Sbjct: 185 IVKP 188 >gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter aquaeolei VT8] gi|166223694|sp|A1U373|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8] Length = 212 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 116/187 (62%), Gaps = 7/187 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A RD GKG++R LR+ + IPAIIYG D P+A+ ++ K + ++ F + ILT Sbjct: 7 IEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEAFFSHILT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +DI + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P +K QGG Sbjct: 67 VDIQGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAVKLQGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQ---LNIT 180 ++ EV ++C N+P+ I VDLN++++ +H+ D++LP+ K +++ Q ++ Sbjct: 127 IVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKVAALQQGEDHDLP 186 Query: 181 IATIVAP 187 +A+I P Sbjct: 187 VASIHKP 193 >gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia canis str. Jake] gi|109893361|sp|Q3YT12|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake] Length = 209 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G AR +R+NG IPA++YG D + LS ++ + S Sbjct: 3 DQGIVKINASLRENVGTGPARAVRRNGGIPAVVYGKNRDSLSVFLSDREFLSKHRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K G+ Sbjct: 63 THLIELEIGDKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGV 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL-PEKTSSMSQLNIT 180 K+GG LN++ +S+ C N I +I +DL+DL G SIH+ D+ L PE M + N Sbjct: 123 KRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMKEHNPA 182 Query: 181 IATI 184 I TI Sbjct: 183 IVTI 186 >gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium HTCC2083] gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium HTCC2083] Length = 218 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R GKG+AR R+ G +P II+G +DP PI + + K L + F +T+L + Sbjct: 8 FHAEVRTGTGKGAARQARRAGMVPGIIFGGDADPLPINVPFNVLLKALKAGRFKSTLLNM 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q V D+ H DF+++ + + + +PV FINE +PGIK+GG Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPVEFINEEAAPGIKRGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V EV L+ A +IP+ +TVD+ L +GD+I++ DI LP + +A + A Sbjct: 128 LTTVRPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAGAKPTIDRDFVVANLSA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] Length = 206 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A+ R GKG+AR R++G +P I++G ++P I + + +L + F T+ L Sbjct: 8 LVALERSGTGKGAARQARRDGMVPGILFGGDAEPLAIQMPFNKMLHQLKAGRFKQTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q D V D+ H D +++ + + + + V FINE K+PG+K+GG Sbjct: 68 KVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLFIHVDFINEEKAPGLKRGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V EV L A +IPD ITVDL +IGD IH+ D+ LPE + IA I A Sbjct: 128 LTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDVTLPEGVKPTVDRDFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter sp. K31] gi|189042349|sp|B0T899|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter sp. K31] Length = 199 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 101/182 (55%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD+ G G +R R+ G++P ++YG P IA+ + K L++ + + Sbjct: 3 EIILNVEIRDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K Q PV+D +H D +V E + + +PV F N + S G+K+G Sbjct: 63 VTLQHGDEKQSVIAKAVQFHPVTDEPLHFDLYRVDEHQLIKIEIPVHFKNHDISVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++ H V L CPA+ IP+ + +DL IGD+I + +I+LPE + + IA + Sbjct: 123 GTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIKLPEGVRPAMERDFVIANL 182 Query: 185 VA 186 A Sbjct: 183 KA 184 >gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc [Saccharophagus degradans 2-40] gi|109893392|sp|Q21FL7|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40] Length = 210 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 117/194 (60%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L+A RD GKG++R LR+ G +PAI+YG +P+ + ++ ++++K L ++ Sbjct: 1 MSNEDFILNAEARDVSGKGASRRLRREAGLVPAIVYGGRKNPQNVTITLRELTKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+TL+IG VI KD Q P ++ +HADFL+VS+ VP+ FINE S Sbjct: 61 FYSHIITLNIGDSSEQVILKDLQRHPATNFAMHADFLRVSKTKKFNTKVPLHFINEATSK 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K QGGK+ E+ + C ++P+ I VDL ++++G +H+ DI LP+ S++ Sbjct: 121 GVKEQGGKVQHSMTELEIACLPADLPEFIEVDLANVELGGIVHISDIVLPKGVESIALQQ 180 Query: 176 --QLNITIATIVAP 187 ++ +A+I P Sbjct: 181 GEDHDLPVASIFKP 194 >gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25P [Magnetococcus sp. MC-1] gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus sp. MC-1] Length = 198 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 104/175 (59%), Gaps = 2/175 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD--PKPIALSAKDISKRLYSKNFMTTIL 65 V R+ +GKG AR LR+ G+IPA++YG + + L+A ++ T+ Sbjct: 4 FETVTREGLGKGVARKLRQQGRIPAVVYGAGKENISLEMNLNAFRVAIAGQGPTLFNTVH 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + ++ +V+ + Q PV+D+ H DFL++ +TVHVPV NE+++PG+K+GG Sbjct: 64 QLSVDGKVENVLVRGVQRHPVTDLPEHVDFLRLDPTKMITVHVPVHLRNEDQAPGLKRGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +V HE+ + C + NIP I VD +++IG SIH+EDI LPE T + +N T Sbjct: 124 IIQIVRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIEDITLPEGTKVFTDVNFT 178 >gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter sp. PRwf-1] gi|172048580|sp|A5WHA5|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1] Length = 224 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 104/157 (66%), Gaps = 2/157 (1%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKE 72 D+ GKG++R LRK +PAIIYG +P IA+ ++ K L ++ F + ILT+++ G+E Sbjct: 16 DQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKKNELWKLLENEAFFSNILTINLEGEE 75 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + VI KD Q P +HADF ++ +G + + +P+ F ++PGIK GG L+ + Sbjct: 76 HLAVI-KDLQRHPSKGFAMHADFQRIVKGQKINMQIPLHFTGREEAPGIKAGGILSTLVT 134 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ ++C +N+P+ + VD+++L+IG+S+H+ DI+LPE Sbjct: 135 DIEIVCLPSNLPEFLEVDVSNLEIGESLHLTDIKLPE 171 >gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] gi|166223712|sp|A8GP85|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] Length = 199 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + G G+AR LR+ G++PAIIYG P I+L K I+K F++ ++ + Sbjct: 7 LEAKPRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKAITKYYRKPAFISQLINV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I ++ V+PK +L PV+D++ H DF+ + E T + VP+ + + ++ G+K+GG Sbjct: 67 TIDQKQYKVLPKAVELHPVTDMVRHVDFVFL-EAKTQKMEVPIVYEGKERALGVKRGGYF 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ +ATI+ Sbjct: 126 NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFVLATIIG 184 >gi|197120548|ref|YP_002132499.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. K] gi|226736277|sp|B4ULC3|RL25_ANASK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196170397|gb|ACG71370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. K] Length = 240 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+L L Sbjct: 6 LSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTLLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KDY +DPV+ L+HADFL+VS V V VPV + ++ G+ +GG L Sbjct: 66 QVDGASKHVLFKDYTVDPVTRKLLHADFLEVSLDQPVRVEVPVATV--GRAAGVAEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V HEV + N IP I VD+ +LKIG S+H+ +++ PE Q + + + P Sbjct: 124 SVATHEVVVEALPNKIPVRIEVDVTELKIGRSLHVSELKPPEGCKFKFQTDYVVVFVAVP 183 >gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] Length = 220 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 115/190 (60%), Gaps = 7/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A +R+ GKG++R LR+ G++PAIIYG DP+ + L KDI K L ++ F + Sbjct: 4 QFEVQAELREDTGKGASRRLRRLAGKVPAIIYGGDKDPQSLTLVRKDIEKSLENEAFYSQ 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 +L +++ E+ I KD Q P + ++HADFL++ E + V+VP+ F+NE G+K Sbjct: 64 VLEVNVAGEVQKAILKDLQRHPAKNNVMHADFLRIDEKVAIKVNVPIHFLNEEDCAGVKM 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 +GG + ++ + C +IP+ I VD+ ++ G IH+ ++ LPE +S++ Sbjct: 124 EGGMIQHQATDIEVSCLPGDIPEYIEVDMLEVITGQIIHLSEVTLPEGVTSVALSLGEDH 183 Query: 178 NITIATIVAP 187 ++ IA++VAP Sbjct: 184 DLAIASVVAP 193 >gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas neptunium ATCC 15444] gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + +R++ G G AR R NG +P ++YG DP I+L ++ K + + +F Sbjct: 1 MSKSQIVFNVEVRERTGTGGAREARNNGFVPGVLYGGGIDPVAISLKKNEVIKAIETGHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ TL E VIP+ Q+ PV+D +H D ++ + V VPV F SPG Sbjct: 61 LSATATLIHKGERQLVIPQGIQMHPVTDQPMHVDLRRIKVDQIIKVEVPVHFTGMEASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LNVV H V L PA IP+++ D++ L++GD++ + +I LPE ++ + Sbjct: 121 LKKGGTLNVVRHSVELNVPAGKIPEALEADISKLEVGDNVKISNITLPEGAEPVITDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] Length = 208 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 6/183 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ G+ + R LR+ G+IPAIIYG +A+ ISK L + F T++L + Sbjct: 6 VEAELRETNGRSATRRLRRTGKIPAIIYGGDKPDLSVAVDYFVISKLLNQEEFHTSMLEV 65 Query: 68 DI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + GK V + K Q DP+ D + H DF++VS +T+ VPV INE+K PG+ + Sbjct: 66 KVKGSRGKNTVML--KATQWDPIKDTVTHLDFIRVSSSDMITLDVPVVAINEDKCPGVAK 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG ++V+ H + + A++IP I +D + L IGDS+H+ED+ LPE ++N T+ Sbjct: 124 GGLIDVIRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIEDVTLPEGAVVHHEVNFTVLN 183 Query: 184 IVA 186 + A Sbjct: 184 VAA 186 >gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] Length = 211 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 106/171 (61%), Gaps = 2/171 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A +R+ G G++R LR+ G+ PAI+YG +P+ + L K++ K + F + I+ Sbjct: 5 ELNAEVREVKGTGASRRLRREEGKTPAIVYGGDKEPQQVTLQLKELKKAFEDETFFSHII 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++G VI KD Q P ++++H DFL+VS+ + + H+P+ F+NE+ G+K QG Sbjct: 65 KLNVGGTAETVIVKDVQRHPYQNLVMHVDFLRVSKSTVIKQHIPLHFLNEDTCKGVKLQG 124 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 GK+ ++ ++C A +P+ I VDL D+++G +H+ D++LP ++ Sbjct: 125 GKITHNMTDIEVICEAGKLPEFIEVDLADVEVGTVLHLSDLKLPAGVEALE 175 >gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] Length = 209 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 7/179 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L+A RD GKG++R LR + +PAI+YG DP+ IA++ + K L ++ F Sbjct: 1 MSTEDFTLNAKARDDQGKGASRRLRHDNLVPAIVYGGEKDPQNIAIAQNEFVKHLENEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL + E VI KD Q P L+HADFL+VS +T VP+ FINE G Sbjct: 61 YSHIVTLVVDGEKQDVILKDLQRHPAKAQLLHADFLRVSRTQKLTTRVPLHFINEESCKG 120 Query: 121 IK-QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +K QGG VV H E+ + C ++P+ I VDL D ++G +H+ D+ LP S++ Sbjct: 121 VKLQGG---VVAHSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHISDLNLPAGVESVA 176 >gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae] Length = 202 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR+ GQ P I+YG + P IA+ + L + F ++IL Sbjct: 2 KVIAFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I ++ V+ +D+Q+ +++H DF +V + VP+ F+N SP +K GG Sbjct: 62 LEIEGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHGG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ V E+ + C N+P+ I VDL L +G SIH+ D++LP ++++Q N+TIAT Sbjct: 122 IISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATAT 181 Query: 186 AP 187 P Sbjct: 182 VP 183 >gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25/general stress protein Ctc [Jannaschia sp. CCS1] gi|109893367|sp|Q28L99|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1] Length = 216 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G +P I+YG DP I + + KRL F++T+ + Sbjct: 8 LIAEARTGTGKGAARQARREGNVPGIVYGGGIDPLAINIPFNVLLKRLKDGRFLSTLFNM 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G++ V VI ++ Q D V D+ H DF+++ S + + +PV I E + PG+K+GG Sbjct: 68 KVEGQDDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPVEVIGEEECPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V EV L A +IP+ IT+DL L+IGD++ + + LP + + IA + A Sbjct: 128 LTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAGAKATIDRDFVIANLTA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Puerto Rico] gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Virginia] Length = 217 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + ++ Sbjct: 8 RVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLIK 67 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K GG Sbjct: 68 LCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGA 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE +M + N IA++ Sbjct: 128 LNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVS 187 Query: 186 A 186 A Sbjct: 188 A 188 >gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] Length = 235 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 1/188 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + AV+R K LR G +P I+YG++ +++ + L + NF Sbjct: 1 MSSENNTIEAVLRSTKTKSELNKLRSEGFVPGILYGDIDKNINLSVKKSTLDHFLKTTNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +++ + V+P+D + + +S+ IH DF ++S + V V +PV+F+NE PG Sbjct: 61 KSKVFKINLDGKEYEVLPRDIEFENISNQPIHVDFQKLSTNTKVVVWIPVKFLNEETCPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K GG LN+V +V L CPA+ IP + VDL +IG+SIH+ I LPE ++ + Sbjct: 121 LKMGGVLNIVRRKVELDCPADKIPSELNVDLAKREIGESIHISAINLPEGVVPTIKDRDF 180 Query: 180 TIATIVAP 187 TIAT+ AP Sbjct: 181 TIATVAAP 188 >gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. St. Maries] gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] gi|68053041|sp|Q5P9A5|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries] gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] Length = 218 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + ++ Sbjct: 8 RVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLIK 67 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K GG Sbjct: 68 LCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGA 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE +M + N IA++ Sbjct: 128 LNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVS 187 Query: 186 A 186 A Sbjct: 188 A 188 >gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Mississippi] Length = 218 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + ++ Sbjct: 8 RVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLIK 67 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K GG Sbjct: 68 LCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGA 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE +M + N IA++ Sbjct: 128 LNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVS 187 Query: 186 A 186 A Sbjct: 188 A 188 >gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter sp. 1501(2011)] Length = 225 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 104/157 (66%), Gaps = 2/157 (1%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKE 72 D+ GKG++R LRK +PAIIYG +P IA+ ++ K L ++ F + ILT+++ G+E Sbjct: 16 DQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKNNELWKLLENEAFFSNILTINLDGEE 75 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + VI KD Q P +HADF ++ +G + +++PV F+ ++PGIK GG L+ + Sbjct: 76 HLAVI-KDLQRHPSKGFPMHADFQRIVKGQKINMNIPVHFVGREEAPGIKAGGILSTLVT 134 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ ++C + +P+ + VD++ L+IG+S+H+ DI+LPE Sbjct: 135 DIEIVCLPSALPEYLEVDVSGLEIGESLHLTDIKLPE 171 >gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] gi|254801033|sp|B9KHC7|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] Length = 218 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + ++ Sbjct: 8 RVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLIK 67 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K GG Sbjct: 68 LCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGA 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE +M + N +A++ Sbjct: 128 LNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVVASVS 187 Query: 186 A 186 A Sbjct: 188 A 188 >gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia chaffeensis str. Arkansas] gi|109893362|sp|Q2GHW3|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia chaffeensis str. Arkansas] Length = 210 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 1/184 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R VG G +R LR +G+IPA+IYG D I+LS ++ + S Sbjct: 3 DQGIVKINASLRKNVGTGPSRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+I + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K GI Sbjct: 63 THLIELEIDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGI 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL-PEKTSSMSQLNIT 180 K+GG LN++ +S+ C I +I +DL+ L G SIH+ D++L PE +M + N Sbjct: 123 KRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPA 182 Query: 181 IATI 184 I TI Sbjct: 183 IVTI 186 >gi|83644562|ref|YP_432997.1| 50S ribosomal protein L25/general stress protein Ctc [Hahella chejuensis KCTC 2396] gi|109893366|sp|Q2SLA2|RL25_HAHCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83632605|gb|ABC28572.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hahella chejuensis KCTC 2396] Length = 208 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 6/169 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A RD GKG++R LR+ +G++P IIYG + P I++S +S L ++ F + Sbjct: 4 EFSLNAEKRDVQGKGASRRLRRVDGKVPGIIYGGETAPVAISVSHNQLSHALQNEAFYSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ILTLD+ VI KD Q P I++HADFL+V + + V+VP+ FINE+K G++Q Sbjct: 64 ILTLDVEGTNESVILKDLQRHPYKPIIMHADFLRVQKDQKLHVNVPLHFINEDKCEGVRQ 123 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG + H EV ++C N+P+ I VD+ +++ +H+ D++LPE Sbjct: 124 GG--GSISHQQTEVEVICLPANLPEFIEVDMTSVQVEQILHLSDLKLPE 170 >gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria pomeroyi DSS-3] gi|68053037|sp|Q5LV90|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3] Length = 207 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A+ R GKG+AR R++G +P I++G ++P PI + + K L + F +T+ L Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVFGGDNEPLPIQIPFNRLLKMLKAGRFKSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G E V VI +D Q D V D+ H D +++ S + + + V F+N +PG+K+GG Sbjct: 68 KVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVDFVNHAAAPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L A +IP+SITVDL L IGD + + + LP + + IA I A Sbjct: 128 LTVVRPEVELEVTAGDIPESITVDLTGLNIGDVVTISSVTLPAGAKPTVERDFVIANISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25/general stress protein Ctc [Granulibacter bethesdensis CGDNIH1] gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1] Length = 219 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A R + GKG+AR R+ G++PA+IYG P I L + I + L + + + Sbjct: 11 TQIEAEARSRAGKGAARATRREGKVPAVIYGARQTPDLIKLDPRIIHRELNRGGWRSRLY 70 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + +D Q PV+D H DF +++ G V V V V+F NE SPG+K+GG Sbjct: 71 EINVDGASTRALIRDVQFHPVTDAPEHVDFQRLAAGEPVRVAVAVQFQNEATSPGLKRGG 130 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR-LPEKTSSMSQLNITIATI 184 LN+V H V +LC +++P+ DL L IGD+I D++ E ++ + +AT+ Sbjct: 131 VLNIVRHTVEVLCDPDHVPEHFEADLGTLDIGDNIRWSDLKGTGEAKPTILDRDFVVATV 190 Query: 185 VAPIS 189 P + Sbjct: 191 APPTT 195 >gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] gi|254801065|sp|B8GLA7|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] Length = 212 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 5/169 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R GKG++R LR+ G++PAI+YG DP+PI L + L + F + IL+ Sbjct: 6 ELQAEPRADQGKGASRRLRRAGKVPAILYGEGKDPQPITLDHNAVMLNLEHEAFYSHILS 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + +G + I +D Q P I++H D L+VSE + VHVP+ F NE G+K GG Sbjct: 66 VKLGGKAEKAILRDVQRHPCKPIILHLDLLRVSEDHAIRVHVPLHFTNEESCVGVKTGG- 124 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +V H EV + C ++P+ I VD+ L +GDS+H+ I LPE S Sbjct: 125 -GMVSHQMVEVEVECLPKHLPEFIEVDVASLNVGDSLHLSQISLPEGVS 172 >gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] Length = 215 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R++G +P I++G DP PI L + +L + F T+ L Sbjct: 8 LEAFERTGTGKGAARQARRDGMVPGIVFGGDLDPLPINLDFNKLLTKLRAGRFKATLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI +D Q V D+ H D +++ + + + + V E SPG+K+GG Sbjct: 68 KVEGQEDVRVICRDVQRHVVKDLPTHVDLMRLKRTTKINLFIQVEVEGEEVSPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V EV L+ A +IPD IT+D+++L+IGDS+ + ++LP T + + IA I A Sbjct: 128 LTLVRPEVELVVTAGDIPDHITIDVSELEIGDSLTISSVKLPNGTKPVIDRDFVIAQISA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|114319446|ref|YP_741129.1| 50S ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] gi|122312594|sp|Q0ABZ8|RL25_ALHEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114225840|gb|ABI55639.1| LSU ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] Length = 214 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 102/168 (60%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KL A +R + G+G++R LR+ ++PAI+YG +P+ I L+ + + + + F Sbjct: 1 MSAIEMKLDAELRTETGRGASRRLRRAKRVPAIMYGGHQEPQAITLNLLQLDRLMQEEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+++ + VI KD Q P ++ H D +V G V VPV F+NE+K+PG Sbjct: 61 YSQILTVNLDGKSEQVIVKDLQRHPFKPLVEHVDLQRVVAGEKVHTSVPVHFVNEDKAPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 IK GG ++ +E+ + C ++P+ + VD++ L++G +IH+ D+ LP Sbjct: 121 IKAGGIIHHDLNEIEIACLPKDLPEYLEVDVSALELGSAIHLSDVPLP 168 >gi|302338328|ref|YP_003803534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] gi|301635513|gb|ADK80940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] Length = 209 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+QK L+ R ++ KG+AR LR+ G+IPAIIYG+ S+P PI++ A + K+ YS Sbjct: 1 MEQK--TLTGFARTELKKGAARRLRREGKIPAIIYGH-SEPVPISVPANEFEKK-YSDLS 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TI+T+ +G + V+ KDYQ + + + H DF ++ G + HVP+ + + G Sbjct: 57 ESTIITISVGGKEYDVLIKDYQENTMRGEVTHLDFFEIERGKKLKTHVPLHAVG--TAQG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L + HE+ + C +IP + +++ + IGDS H+ D+ +PE + + ++ Sbjct: 115 VKEGGILELGFHEIEIECLPKDIPSHLEINIEGMAIGDSRHISDMSVPEGVTVLVSTDMV 174 Query: 181 IATIVAP 187 A+I P Sbjct: 175 AASITTP 181 >gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 7169] gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 12P80B1] gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 103P14B1] gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC1] gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC7] gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC8] gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis O35E] gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis CO72] Length = 223 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 6/186 (3%) Query: 8 LSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+ V R + GKG++R LRK+ +PAIIYG + I + +I K L +++F ++++ Sbjct: 6 LNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEIVKALSNESFFSSVI 65 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S G K+GG Sbjct: 66 TINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSSVGKKEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK----TSSMSQLNITI 181 L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + T + LN TI Sbjct: 126 ILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEADLNRTI 185 Query: 182 ATIVAP 187 AT+ P Sbjct: 186 ATMQPP 191 >gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine bacterium HP15] Length = 223 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E + A RD G+G++R LR+ + IPAIIYG D PIA+ ++ K L ++ F + Sbjct: 10 QEFVIEAFPRDDQGRGASRRLRREERKIPAIIYGGNKDATPIAIWHNELKKALENEAFFS 69 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LT+++ + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P IK Sbjct: 70 HVLTVELNGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAIK 129 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG N +EV ++C N+P+ I VD+ +++ +H+ D++LP+ Sbjct: 130 LHGGVANHQINEVEVICLPQNLPEFIEVDMTTVEMDQVVHLSDLKLPK 177 >gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 46P47B1] gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 101P30B1] Length = 223 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 110/186 (59%), Gaps = 6/186 (3%) Query: 8 LSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+ V R + GKG++R LRK+ +PAIIYG + I + ++ K L +++F ++++ Sbjct: 6 LNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEVVKALSNESFFSSVI 65 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S G K+GG Sbjct: 66 TINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSSVGKKEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK----TSSMSQLNITI 181 L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + T + LN TI Sbjct: 126 ILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEADLNRTI 185 Query: 182 ATIVAP 187 AT+ P Sbjct: 186 ATMQPP 191 >gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter pasteurianus IFO 3283-01] gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01] gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03] gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07] gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22] gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26] gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32] gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12] Length = 204 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIVKGIQTSGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAP 187 + TVDL+ L I D++ ED++ E + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTEGVTPLTHEENFVVASIAAP 187 >gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] Length = 202 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 100/166 (60%), Gaps = 5/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +++AV RD G G++R LR G +P ++YG D P+ ++AK++ + + F ++LT Sbjct: 4 EINAVKRDAKGTGASRRLRHAGSVPGVVYGGGKDAYPLEINAKELFLQFRHEAFHASVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I + V+ +D+Q+ PV + + H DF +VS + V VP F N + +PG+K GG Sbjct: 64 LIIEGKKESVLLRDFQMHPVRNTIQHVDFQRVSATEKIHVKVPFHFTNADAAPGVKLGG- 122 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +V H E + C A ++P+ I VD++ L++G SIH+ I+LP+ Sbjct: 123 -GIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQIKLPK 167 >gi|329897177|ref|ZP_08271917.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] gi|328921332|gb|EGG28726.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] Length = 210 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 13/199 (6%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 DQ E +SA R +GKG++R LR+ +P ++YG DP +++ +KDI K L ++ F Sbjct: 3 DQFEVAVSA--RSDIGKGASRRLRRLENLVPGVVYGGHKDPVSVSVVSKDIEKSLENEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL+ G + KD Q P ++ ++H DFL+V G + V VP+ F NE+ G Sbjct: 61 YSHVLTLNFGDHTESAVLKDLQRHPATNKVVHLDFLRVVAGEAIKVQVPLHFTNEDTCKG 120 Query: 121 IKQGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--- 174 +K GG + V H E+ + C +IP+ I VD+ ++++G +H+ D+ LP+ +S+ Sbjct: 121 VKIGGGM--VQHQMTEIEVSCLPKDIPEFIEVDMTNVEVGAIVHLSDLTLPKGVTSVALS 178 Query: 175 --SQLNITIATIVAPISGS 191 + ++ +A++ P G+ Sbjct: 179 LGADHDLAVASVTPPKGGA 197 >gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] Length = 220 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR +R+ +P I++G DP PI + + K+L F +T+ L Sbjct: 12 LHAQERTGTGKGAARAVRRAHMVPGIVFGGDVDPLPIQIPYNVLIKKLKEGRFKSTLFNL 71 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q D V D+ H D +++ + + + +PV F E+ +PG+K+GG Sbjct: 72 KVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPVTFTGEDVAPGLKKGGV 131 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV +E+ L+ A +IP+ +TVDL+ + IGD++ + + LPE + + I I A Sbjct: 132 LTVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQVTLPEGAQTTIDRDFVICNISA 191 Query: 187 P 187 P Sbjct: 192 P 192 >gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] gi|109893377|sp|Q4FPH0|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] Length = 228 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+TL Sbjct: 4 LDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG L Sbjct: 64 NLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V ++ L CP+ IP +IT+DL+ + IG+S + ++L E T ++ + IAT+ A Sbjct: 124 NIVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLAA 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|254447756|ref|ZP_05061221.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] gi|198262536|gb|EDY86816.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] Length = 224 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 108/169 (63%), Gaps = 2/169 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ +GKG++R LR+ ++PA++YG+ DP + LS ++ + ++ F + IL L Sbjct: 7 IKAQVREDLGKGASRRLRRADKLPAVLYGS-GDPVSLTLSHAEMILMVENEAFFSHILEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 DI + I +D Q P ++L H DF +V G +TV VPV FINE S G+K +GG+ Sbjct: 66 DIDGNKENAIVRDMQRHPFKNLLTHIDFQRVVAGQEITVSVPVHFINEETSKGVKLEGGE 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 ++ + E+ ++C ++P+ I VD+ +L +G+++H+ D+++PE S++ Sbjct: 126 VHHLMTEIEVVCMPRHLPEYIEVDIAELGLGETLHLSDLKMPEGVKSVA 174 >gi|163739061|ref|ZP_02146474.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] gi|163741697|ref|ZP_02149087.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161384870|gb|EDQ09249.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161387866|gb|EDQ12222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] Length = 209 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 1/176 (0%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GK 71 R GKG+AR R+ G +P +++G +DP I + ++ K+L + F +T+ L + G+ Sbjct: 13 RTGSGKGAARAARRAGMVPGVVFGGDADPVSIQIPFNELLKKLKAGRFKSTLWNLKVEGQ 72 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 E V VI +D Q D V D+ H D +++ S V + VPV FINE ++PGIK+GG L V Sbjct: 73 EDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEEEAPGIKRGGVLTAVR 132 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV L+ A +IP+ + VDL L +GD++ + I+LPE + +A I AP Sbjct: 133 PEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKLPEGAKPTIDRDFVVANISAP 188 >gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] Length = 228 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 104/181 (57%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+TL Sbjct: 4 LDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG L Sbjct: 64 NLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVA 186 N+V ++ L CP+ IP +IT+DL + IG+S + ++L E T ++ + IAT+ A Sbjct: 124 NIVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLAA 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola sp. HTCC2999] Length = 209 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 1/176 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PAI+YG +P + L+ + + + F Sbjct: 1 MSEAIFNLEAQVRTDLGKGASRRLRHADKVPAILYGADKEPVSLTLAHNKLMQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTLD+ E V + KD Q P ++H DFL+V V +VPV FINE +P Sbjct: 61 YSHVLTLDVDGEKVEALVKDMQRHPYKPKILHVDFLRVDASKAVHTNVPVHFINEETAPA 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 IK QGG +E+ + C + +P+ I VDL ++++G ++H+ DI LPE SS+ Sbjct: 121 IKTQGGHAEHHVNEIEVSCLPSQLPEFIEVDLTNVELGQTLHLSDITLPEGVSSIE 176 >gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] Length = 215 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R GKG+AR R++G +P ++YG DP I + + KRL + F Sbjct: 1 MAGKVPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPISINVPFNVLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + G + V VI ++ Q V D+ H DF+++ + + + + V FINE P Sbjct: 61 LSTLFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEEDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K+GG L V +EV L+ A +IP+ +TVDL L++GD+I + I+LP + + Sbjct: 121 ALKEGGVLIPVRNEVELIVTAGDIPEVLTVDLTGLELGDTITISSIKLPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP + Sbjct: 181 VIANLQAPAA 190 >gi|89069015|ref|ZP_01156396.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] gi|89045384|gb|EAR51449.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] Length = 210 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GKG AR R+NGQ+P ++YG DP PI L + RL F++T+ L Sbjct: 8 LVASKRERTGKGGAREARRNGQVPGVVYGGGVDPLPINLEYNSLLTRLRKGRFLSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G++ V VI + Q D V D+ H DF+++ S V + +PV F N +PGIK+GG Sbjct: 68 KVEGEDDVRVICRGVQRDVVKDLPTHVDFMRLRRTSKVNLFIPVEFENHGAAPGIKRGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+ A +IP+ ITVDL L+IGD++ + + LPE + IA + A Sbjct: 128 LTVVRPEVELVVTAGDIPEKITVDLTGLEIGDTVTISSVDLPEGAKPTIDRDFVIANVSA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|315185672|gb|EFU19440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta thermophila DSM 6578] Length = 209 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ KL+A++R K A+ LR+ G+IPA+IYG D P+AL A++ + + Sbjct: 2 KKTKLTAIVRTAQKKTEAKALRREGKIPAVIYGG-KDQVPVALDAREFHRTFHGTVAENV 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ E G+K Sbjct: 61 IVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL--EGTPEGVK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + C ++P++I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 119 KGGLLEFFVQELEVTCLPKDLPEAIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTVV 178 Query: 183 TIVAPIS 189 + +S Sbjct: 179 AVGHAVS 185 >gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] Length = 230 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 104/164 (63%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +++A +R+ G G++R LR G+ P ++YG + + + +K++ + + F +ILT Sbjct: 4 QINANVRELKGTGASRRLRHAGKTPGVLYGGDKEATSLEIDSKELFMQFRHEAFHASILT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + VI +D+Q+ PV + ++H DF +++E ++V VP FINE +PG+K +GG Sbjct: 64 LNLAGKKEAVILRDFQMHPVRNNIVHIDFQRINENEKISVKVPFHFINEETAPGVKLEGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ + E+ + C ++P I VD++ L IGDSIH+ ++++PE Sbjct: 124 LISHIMTEIDISCLPKDLPQYIEVDMSALSIGDSIHLSEVKVPE 167 >gi|220932954|ref|YP_002509862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] gi|254801051|sp|B8D015|RL25_HALOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219994264|gb|ACL70867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] Length = 218 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG AR LR+NG IP +IYG P+P+A+ AKD++K + + L Sbjct: 6 LKAEVRKDTGKGVARKLRRNGLIPGVIYGKTRKPQPLAVDAKDLNKVVGGNAILDMTLVD 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +E + KD Q DPV ++H DF +S +TV VPV + + G+ GG L Sbjct: 66 GDKEEKETAVVKDLQRDPVQGNILHVDFQHISMTDKLTVSVPVHIVGNAR--GVVAGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + E+ + C +IPD I VD+ DL +GDS+ + DI P T ++ + I TIVAP Sbjct: 124 QQLAREIEVECLPTDIPDEIEVDITDLGLGDSLSVGDIEPPANTDFITPEDEVIVTIVAP 183 >gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] Length = 215 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 1/183 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R GKG+AR R++G +P ++YG DP I + + KRL + F++T+ L Sbjct: 8 FEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPIAINVPFNVLLKRLQAGRFLSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI ++ Q V D+ H DF+++ + + + + V FINE++ P +K+GG Sbjct: 68 KVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEDECPALKEGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V +EV L+ A +IP+ +TVDL L++G++I + I+LP + + IA + A Sbjct: 128 LIPVRNEVELIVTAGDIPEILTVDLTGLELGETITISSIKLPAGAKATIDRDFVIANLQA 187 Query: 187 PIS 189 P + Sbjct: 188 PAA 190 >gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] Length = 189 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P I++G +P PI + ++ KRL + F +T+ L + G E V VI +D Q D V D Sbjct: 2 VPGIVFGGDKEPLPIQIPFNELFKRLKAGRFKSTLWNLKVDGHEDVRVICRDVQRDVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H D +++ + + + +PV FINE +PGIK+GG L VV EV LLC A +IP+ IT Sbjct: 62 LPTHLDLMRLRRTTKIALFIPVEFINEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKIT 121 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VDL L+I D + + + LP+ T + IA I AP Sbjct: 122 VDLAGLEINDVVTISSVDLPDGTKPTIDRDFVIANISAP 160 >gi|153876444|ref|ZP_02003761.1| Ribosomal protein L25 [Beggiatoa sp. PS] gi|152067092|gb|EDN66239.1| Ribosomal protein L25 [Beggiatoa sp. PS] Length = 212 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 11/193 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ K+ A +R + GKG R LRK G +PAIIYG +P + LS D+ ++L + F + Sbjct: 2 EQFKIEAQLRTERGKGENRRLRKAGYVPAIIYGGDKEPISLTLSHNDLLRQLEHEAFYSR 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ILT++I + + KD P ++H DF +VSE + VP+ FINE+KS G+K Sbjct: 62 ILTVNIDDQPEQAVLKDLHRHPYRPTILHLDFQRVSEAQKLYREVPLHFINESKSVGVKL 121 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT------SSM 174 GG L V H EV + C ++P+ I VDL ++ + D++H+ D+ L E S Sbjct: 122 GGGL--VSHHLAEVEIRCFPKDLPEFIEVDLTEINLNDTVHLSDLVLSEGVEIVALISKD 179 Query: 175 SQLNITIATIVAP 187 + N+ +A++ P Sbjct: 180 ASRNLPVASVNLP 192 >gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] Length = 201 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 102/166 (61%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +++A R G G++R LR+ G +PAI+YG DP+ +++S ++ K L + F + +L Sbjct: 6 EVNAQPRTGTGTGASRRLRRTGLVPAIVYGAHQDPEMVSVSHNELLKHLEHEAFYSHVLD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G ++ V+ KD Q P ++H DF++VS+ + + VP+ F+NE+ G+K GG Sbjct: 66 LKVGDDVTKVVLKDMQRHPAKPFILHVDFMRVSQDEKLKMVVPLHFLNEDTCKGVKLGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 ++ EV ++C ++P+ I VD+ +++IG +H+ ++ LPE + Sbjct: 126 VSHTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSELALPEGVA 171 >gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] Length = 209 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G +P ++YG +P+ I + ++ K+L + F +T+ L Sbjct: 8 LVAQARAGTGKGAARAARRAGMVPGVVYGGDVEPQAIQIPFNELLKKLKAGQFKSTLWNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI +D Q D V D+ H D +++ S + + +PV F+NE+ PGIK+GG Sbjct: 68 KVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPVEFLNEDTCPGIKKGGM 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+ A +IP+ I VDL D IGD I + I LP + + +A I A Sbjct: 128 LTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDLPGGSKPTIDRDFVVANIAA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|256821850|ref|YP_003145813.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] gi|256795389|gb|ACV26045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] Length = 229 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 11/191 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E +A +R +GKG++R LR+ QIPAI+YG +PK I+L+ I L + ++ Sbjct: 3 EYTFNAELRSDMGKGASRRLRREADQIPAIVYGGKEEPKSISLNHNQIINMLDEEAVYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ LDI ++ V+ KD Q ++H D ++ G + +V + FINE +PG+K Sbjct: 63 IIKLDIAGKVEEVVIKDIQRHAYKPKVLHMDLKRIVRGEIMNANVALHFINEKSAPGVKA 122 Query: 124 GGKLNVVCHEVS---LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS----SMSQ 176 GG +V H+V+ + C N+P+ I VDL L+IG++IH+ D++LPE + Sbjct: 123 GG---IVSHQVTSVEVACRPRNLPEYIEVDLGALEIGETIHLSDLKLPEGVELTALQGEE 179 Query: 177 LNITIATIVAP 187 ++++A IV P Sbjct: 180 HDLSVANIVRP 190 >gi|304311481|ref|YP_003811079.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] gi|301797214|emb|CBL45434.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] Length = 206 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 2/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ G +IPAIIYG + P I + K++ K L ++ F + +LT Sbjct: 7 LNASLRTDLGKGASRRLRRAGTEIPAIIYGGDAAPATITVVYKELVKALENEAFYSHVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ V V+ KD Q P + HADF++V + + VP+ F+NE+K G+K QGG Sbjct: 67 LNLDGNAVQVVLKDLQRHPARNTPTHADFMRVDATRKIQMVVPLHFVNEDKCVGVKTQGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ EV + C A ++P+ + VD+ L +G +IH+ DI+LP Sbjct: 127 AISHQLSEVLISCLAKDLPEFLEVDVAGLALGHAIHLADIKLP 169 >gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193] gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193] Length = 209 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G +P ++YG +DP I + + K+L + F +T+ L Sbjct: 8 LVAEERAGTGKGAARAARRAGMVPGVVYGGDADPLSIQIPFNVLLKKLKAGKFKSTLWNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G+E V VI +D Q D V D+ H D +++ S + + +PV FINE+ PG+K+GG Sbjct: 68 KVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSEINLFIPVEFINEDTCPGVKKGGM 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L VV EV L+ A +IP+ +TVDL + +IGD I + I LP + IA I A Sbjct: 128 LAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIELPTGARPTIDRDFVIANIAA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] Length = 204 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIIKGIQASGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAP 187 + TVDL+ L I D++ ED++ + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTAGVTPLTHEENFVVASIAAP 187 >gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] Length = 214 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 1/160 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R++ GKG+AR RK+G++PA+IYG + ++L +D+ K ++ + + + Sbjct: 6 RIEAEARERAGKGAARATRKDGRVPAVIYGAKQEAVLLSLDPRDVMKEMHKGGWQSHLYE 65 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + G E V + ++ Q PV D +H DF +++ G + V VPV F NE +PGIK+GG Sbjct: 66 VAVAGAEPVRCLMREVQFHPVKDSPLHVDFQRLAPGQMIRVKVPVVFQNEESAPGIKEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 LNVV E+ +L + +P+ +DL IGDS+ ++ Sbjct: 126 VLNVVRRELEVLSDPDQVPEQFEIDLGAAVIGDSLRWSNV 165 >gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010] gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010] Length = 240 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 101/167 (60%), Gaps = 1/167 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R GKG++R LR G+IPA++YG DP I+++ + L + F ILT Sbjct: 17 EVQAEARTDEGKGASRRLRHAGKIPAVVYGADKDPVSISINHNQFLRHLDEEAFYAHILT 76 Query: 67 LDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI + V+ KD Q P +D +IHADFL+V +T+ VPV FI E+ +PG+K GG Sbjct: 77 LDIAGKKDQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPVHFIGEDVAPGVKDGG 136 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +++ + EV + C ++P+ I D++ +++ S+H+ ++ LP+ S Sbjct: 137 QVSHMITEVEIACLPQDLPEYIEADISGMEMDGSLHLTELVLPKGVS 183 >gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] Length = 221 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 105/174 (60%), Gaps = 2/174 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ ++A +R +GKG++R LR++ IPAIIYG DP P+ + KD+ K L ++ F + Sbjct: 3 EQLAIAATVRSDLGKGASRRLRRSVDHIPAIIYGAGKDPAPLTIVRKDLEKALENEAFYS 62 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ + + ++ I KD Q P + ++HADFL+V + V++P+ FINE K G+K Sbjct: 63 QVIDVSVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVNIPLHFINEEKCHGVK 122 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +GG + + E+ +LC IP+ I VD+ ++ D IH+ D++LPE S + Sbjct: 123 IEGGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHISDLKLPEGVVSTA 176 >gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12J] gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12D] gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] gi|226736355|sp|B2UER5|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12J] gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12D] gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] Length = 208 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 109/185 (58%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLHFLNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITIA 182 +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N +A Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIADLKLPKGVTILTHGGDENPAVA 181 Query: 183 TIVAP 187 I P Sbjct: 182 NISVP 186 >gi|307544466|ref|YP_003896945.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] gi|307216490|emb|CBV41760.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] Length = 217 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 104/163 (63%), Gaps = 2/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R+ +GKG++R LR+ N Q+PAIIYG P+ IA+ K + + F ++++T Sbjct: 6 LTASVRNDLGKGASRRLRRANEQVPAIIYGGDKAPEAIAVDKTHFYKSIEEEAFFSSVIT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ + V+ +D Q P ++ HADF+++ +T+ VP+ +NE GIK +GG Sbjct: 66 IEVEGKPQQVVVRDLQRHPYKPLVTHADFMRIDATHEITMRVPLHVVNEESCKGIKDEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +L+V+ +EV + C ++PD + +D+ ++ +G ++H+ D++LP Sbjct: 126 ELHVLSNEVEVSCLPKDLPDYLEIDIAEVTLGTTLHLSDLKLP 168 >gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia solanacearum GMI1000] gi|71153161|sp|Q8Y2E2|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum GMI1000] Length = 206 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 109/185 (58%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITIA 182 +N + ++V + C ++P+ I VDL +L+IG ++H+ D++LP+ + ++ N +A Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLPKGVTIVTHGGDENPAVA 181 Query: 183 TIVAP 187 I P Sbjct: 182 NISVP 186 >gi|148260671|ref|YP_001234798.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidiphilium cryptum JF-5] gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] gi|166223656|sp|A5FZ47|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5] gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] Length = 217 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R + GKG AR R+ G++PA+IYG +P IAL + + + + + + + + Sbjct: 7 IAAEDRARAGKGVARATRRAGKVPAVIYGAKQEPTLIALDPRIVLREMKRGGWRSRLYEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + +D QL PV+D H DF +++ G V V V V F+NE S G+K+GG L Sbjct: 67 ETASGKARALMRDIQLHPVTDQPEHVDFQRLAAGEPVRVAVNVNFLNELISVGMKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR-LPEKTSSMSQLNITIATIVA 186 NVV H V +LC ++IPD DL L I D+I D++ E +++ + IATI Sbjct: 127 NVVRHAVEVLCDPDHIPDHFEADLGPLDINDNIRWSDLKGTGEAKPTITDRDFVIATIAP 186 Query: 187 P 187 P Sbjct: 187 P 187 >gi|327481913|gb|AEA85223.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri DSM 4166] Length = 205 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 113/185 (61%), Gaps = 5/185 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N +PA+IYG P+ I++ AKD++K L ++ + +L+ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASFSHVLS 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+K QGG Sbjct: 66 MNVDGQTESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKQQGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNITIA 182 ++ +EV + C ++P+ I VD+ ++++G +HM DI+LP E S ++ +A Sbjct: 126 EILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVSLAHGSDLPVA 185 Query: 183 TIVAP 187 + AP Sbjct: 186 NVHAP 190 >gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.] Length = 211 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 103/181 (56%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ G G AR+LR+ G+IPA+IYG D ++++ KD+ L IL + Sbjct: 1 MKAKLRESAGNGPARVLRRMGEIPAVIYGPGKDTNLLSITIKDLEDILKKAKVGQAILNI 60 Query: 68 DIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +I +H + K+ Q+ PVS L+H DF ++S + V +PV + + + GI G Sbjct: 61 EIQNGALHTRTAMIKELQIHPVSRELLHVDFYEISMDRKIKVKIPV--VTKGIAKGIDFG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++ E+ +LC IP+SI +D+ DL IGDSIH+ D+ LP+ +N TI T+ Sbjct: 119 GMLQIIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDLVLPQGVEIPDDVNYTIVTV 178 Query: 185 V 185 + Sbjct: 179 L 179 >gi|152985832|ref|YP_001350652.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PA7] gi|166223704|sp|A6VC67|RL25_PSEA7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150960990|gb|ABR83015.1| ribosomal protein L25, Ctc-form [Pseudomonas aeruginosa PA7] Length = 204 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 103/164 (62%), Gaps = 2/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N Q+PA+IYG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE+ + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEDVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPK 169 >gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] Length = 241 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMR-DKV-GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M + +L+AV+R D++ GKG++R LRK +PAI+YG +P IA+ ++ K L ++ Sbjct: 1 MSNQTFELNAVVRGDELQGKGASRRLRKQNLVPAIVYGADKEPASIAIRYNELIKSLETE 60 Query: 59 NFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +F + ILT+++ G+ V+ K Q P + +HADF ++ G + + VPV ++ Sbjct: 61 SFFSHILTINVEGQGTEEVVIKALQRHPAKNTPMHADFQRIVRGQAMHITVPVHYVGAED 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE-----KTS 172 +PG K GG E+ + + IP+ +TVD++ + +GDSIH+ DI+LPE + Sbjct: 121 APGHKAGGIFVSNATELEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQLPEGVAIRELE 180 Query: 173 SMSQLNITIATIVAP 187 N T+AT+ AP Sbjct: 181 VTEPFNRTVATMQAP 195 >gi|163734579|ref|ZP_02142018.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] gi|161392072|gb|EDQ16402.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] Length = 212 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R++G +P I++G DP PI + + K+L F +T+ + Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRFKSTLFNM 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q V D+ H DF+++ + + + + V E ++PG+K+GG Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAVEVDGEEEAPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L ++ EV L+ A +IPD IT+D+++++IGD+I + + LPE + IA + A Sbjct: 128 LTLIRPEVELIVTAGDIPDHITIDISEMEIGDNITISSVNLPEGAKPTIDRDFVIAQLSA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] Length = 203 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 103/171 (60%), Gaps = 1/171 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ PAIIYG ++PK + L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKLVELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISDLKLPKGVTILTH 172 >gi|307718726|ref|YP_003874258.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] gi|306532451|gb|ADN01985.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] Length = 209 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 106/187 (56%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ KL+A++R K A+ LR+ G+IP ++YG D P+AL A++ + + Sbjct: 2 KKTKLTAIVRTAQKKTEAKALRREGKIPGVVYGG-KDQVPVALDAREFHRTFHGTVAENV 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ E G+K Sbjct: 61 IVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL--EGTPEGVK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + C ++P+ I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 119 KGGLLEFFVQELEVTCLPKDLPEVIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTVV 178 Query: 183 TIVAPIS 189 + +S Sbjct: 179 AVGHAVS 185 >gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia solanacearum CFBP2957] gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CFBP2957] Length = 203 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITIA 182 +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N +A Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISDLKLPKGVTILTHGGDENPAVA 181 Query: 183 TIVAP 187 I P Sbjct: 182 NISVP 186 >gi|68053213|sp|Q88PX7|RL25_PSEPK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 197 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 101/164 (61%), Gaps = 2/164 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + + Sbjct: 3 EFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L++ +V+ K Q P ++HADF++V G +T VPV FINE ++P +K+G Sbjct: 63 LELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINE-EAP-VKKG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P Sbjct: 121 GEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAP 164 >gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|207727835|ref|YP_002256229.1| 50s ribosomal protein l25 [Ralstonia solanacearum MolK2] gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum MolK2] gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] Length = 203 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITIA 182 +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N +A Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTLHISDLKLPKGVTILTHGGDENPAVA 181 Query: 183 TIVAP 187 I P Sbjct: 182 NISVP 186 >gi|126665169|ref|ZP_01736152.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] gi|126630539|gb|EBA01154.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] Length = 211 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 2/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A RD G+G++R LR+ + IPAIIYG D PI++ ++ K L ++ F + +LT Sbjct: 7 IEAFPRDDQGRGASRRLRRQERKIPAIIYGGHKDATPISIWHNELKKALENEAFYSRVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 +++ E VI KD Q P +L HADF ++++ + VHVP+ +NE +P IK GG Sbjct: 67 IELNGEKESVILKDLQRHPYKPLLSHADFQRINKDEEIFVHVPLHLVNEETAPAIKTFGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + +V + C N+P+ I +DL D+++ +HM D++LPE Sbjct: 127 VAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSDLKLPE 170 >gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. ORS278] gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS278] Length = 191 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 91/143 (63%), Gaps = 1/143 (0%) Query: 46 LSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 + +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH DF+++ +G+T+ Sbjct: 1 MEDRELRQRILAGRFLTTIFDVTLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIR 60 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V VP+ + SPG+K+GG +N+V H + L C A NIP I D++ L+I S+H+ D+ Sbjct: 61 VSVPLHVVGSEGSPGVKRGGTVNIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDV 120 Query: 166 RLPEKTSSMSQ-LNITIATIVAP 187 +LP ++S+ + T+ TIV P Sbjct: 121 KLPTGVKTLSRGEDATLVTIVPP 143 >gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp. TM1040] gi|123379135|sp|Q1GK67|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040] Length = 209 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 5/184 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 EC++ A GKG+AR R+ +P +++G +DP I + + KRL + F +T+ Sbjct: 9 ECQVRA----GTGKGAARAARRANLVPGVVFGGDADPLAIQIPYNVLLKRLKAGRFKSTL 64 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + G + V VI +D Q D V D+ H D +++ S + + +PV FINE + G+K+ Sbjct: 65 FNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECVGLKR 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L VV EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + + IA Sbjct: 125 GGVLTVVRAEVELVVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGSKPTIDRDFVIAN 184 Query: 184 IVAP 187 I AP Sbjct: 185 ISAP 188 >gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter oxydans 621H] gi|68053025|sp|Q5FRT8|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H] Length = 218 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQL 83 R+ G +PA+IYG +P IAL + I K L+ + + + L G E V + +D QL Sbjct: 24 RREGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV+D IH DF +V+ G+ V V V + F+ E KSPGIK+GG LNVV H V + NI Sbjct: 84 HPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVLNVVRHYVDVQADPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKT--SSMSQLNITIATIVAP 187 P+ T +L+ L I D++ D++ E S ++ IA+I AP Sbjct: 144 PEHFTAELSGLDIHDNVRWTDLKGTEGVVLGSGQAADMVIASIAAP 189 >gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] Length = 213 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R GKG+AR R++G +P I+YG +P I + + K+L + F++T+ L Sbjct: 8 LEVTARTGTGKGAARQARRDGLVPGIVYGGGEEPLAINIPYNVLFKKLKAGRFLSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI + Q D V D+ H D +++ + + + +PV F E+ PGI++GG Sbjct: 68 KVEGHDDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIALFIPVEFEGEDDCPGIRKGGL 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L+VV EV L+ A +IP+ +T + L+IGD+I + I LP + + I I A Sbjct: 128 LSVVRPEVELVVTAGDIPEKLTASIAGLEIGDTITISSIELPAGAKATIDRDFVIGNIAA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida KT2440] gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida KT2440] Length = 217 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 102/165 (61%), Gaps = 2/165 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + + Sbjct: 23 EFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHV 82 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L++ +V+ K Q P ++HADF++V G +T VPV FINE ++P +K+G Sbjct: 83 LELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINE-EAP-VKKG 140 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ Sbjct: 141 GEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPK 185 >gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira multiformis ATCC 25196] gi|109893371|sp|Q2YBH3|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 4/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R+ GKG++R LR +G++P IIYG + +PI L ++ +L + F +I Sbjct: 2 QIEISAEKRELQGKGASRRLRGSGKVPGIIYGGENPAQPIELDHNNLYHQLKLEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 LT+ + + V+ +D Q+ P ++H DF +V+ + + VP+ FINE+ +PG+K Sbjct: 62 LTMSVEGQKEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLHFINEDIAPGVKLA 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT---SSMSQLNIT 180 GG ++ V E+ + C ++P+ I+VD+ +L G++IH+ +++LPE + M ++ Sbjct: 122 GGLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEGVEIPALMKGEDLP 181 Query: 181 IATIVAP 187 +ATI P Sbjct: 182 VATIAIP 188 >gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium praevalens DSM 2228] Length = 222 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 106/181 (58%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-FMTTILT 66 + A +R + GKG+AR +R++G IP ++YG +DP+ I + DI K L+S F T + Sbjct: 6 IEAELRTETGKGAARTIRRDGLIPGVVYGRGNDPRSIKVDPLDIEKLLHSNAIFDLTFVG 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D G++ VI KDYQ D + L+H DF +S +TV VP+R E + G++ GG Sbjct: 66 EDGGEDEATVIIKDYQKDVIKQNLLHVDFQFISMDEKITVSVPMRL--EGDALGVRNGGV 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + E+ + IP+ IT+D+++L++G+S+ + D+ L E +++ + I T+V Sbjct: 124 LQHLLREIEIDALPAEIPEEITIDISELEVGESLAVADLELSEGLDLVTESDEVIVTVVT 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|88608536|ref|YP_506196.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] gi|109893370|sp|Q2GEA0|RL25_NEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600705|gb|ABD46173.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] Length = 194 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 3/175 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R G+ SA +LR++G +PA+IYG + +A+S +D+SK ++ + ++ L + Sbjct: 10 RTSFGRNSANVLRRSGFVPAVIYGKERENINVAISVRDVSKH-FAVLSGSGVVELSCEGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+PK Y+L PVS +++H DF+ E ++ VP+ F+N KS I+ G LN+V Sbjct: 69 VYKVVPKAYELHPVSSVVLHLDFVFAGEHAS-KFQVPLNFVNSGKSEAIRLGAMLNIVKR 127 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVA 186 V + C A N+P SI VD+ + K+GDSI D+ P+ +++ N +AT+V Sbjct: 128 TVLVRCTAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATVVG 182 >gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus sp. MP688] gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. MP688] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 6/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +++AV R+ G G++R LR+ G++P I+YG D + K + + F +I Sbjct: 2 QIEITAVKRENQGTGASRRLRRAGKVPGIVYGASKDAVSVEFDHKALFLEFRHEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 LTL++ + V+ +DYQ+ PV + + H DF +VS + V VP+ FIN++ +PG+K Sbjct: 62 LTLNLDGKKEQVVLRDYQMHPVRNTIQHIDFQRVSATEKLHVKVPLHFINQDIAPGVKLS 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL----NI 179 GG + + E + C ++P+ I VDL L+ G SIH+ I+LP K QL + Sbjct: 122 GGVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSIHLSQIKLP-KGVEFVQLAHENDA 180 Query: 180 TIATIVAPISG 190 +A+I P G Sbjct: 181 AVASISVPRGG 191 >gi|148284981|ref|YP_001249071.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Boryong] gi|166223699|sp|A5CF34|RL25_ORITB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146740420|emb|CAM80897.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong] Length = 207 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 4/185 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-TILT 66 L +R G SAR LR+ G++P +IY P + K+++K LY K F + T++ Sbjct: 7 LVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAK-LYRKPFFSSTVIQ 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSE-GSTVTVHVPVRFINENKSPGIKQGG 125 L + + V+PK QL PV++ + H DF+ V + GS V VP+ F + KS GIK+GG Sbjct: 66 LQVDDQRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKEKSLGIKRGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 LN+V V LLCP + IP I D+ ++ +G SI + + LPE + + S + IA++ Sbjct: 126 YLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLVKSTTDYVIASV 185 Query: 185 VAPIS 189 + S Sbjct: 186 IGKSS 190 >gi|330722355|gb|EGH00211.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047] Length = 225 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 2/170 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A RD +GKGS+R LR+ G IPAI+YG P+ I L+ KDI K ++ F Sbjct: 4 EFSLNAQARDVLGKGSSRRLRRLEGNIPAIVYGGDKAPQNITLAHKDIIKAADNEAFFAH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 I+ L+I VI KD Q P +++H DFL+V + + V VP+ FINE++ GIK Sbjct: 64 IIDLNIDGNGESVIVKDMQRPPAKPVIMHVDFLRVRKDVAINVSVPLHFINEDECKGIKL 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 QGG ++ EV + C ++P+SI VD+ ++++ +H+ D+ LP+ + Sbjct: 124 QGGVVSHNLTEVEISCLPGDLPESIDVDMANVEVDQIVHLSDLALPKGVT 173 >gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 7/173 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 2 KVIAYTRAEIGTGASRRLRAAGMAPGIVYGGTSEPVNIKLDHNALFYALKREAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I + V+ +D+Q+ +++H DF +V +TV VP+ FINE+ SP K G Sbjct: 62 LEIDGKAEKVLLRDFQVHAYKPLVLHVDFQRVDANQKITVKVPLHFINEDASPAAKSG-- 119 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 VV H E+ + C N+P I VDL +L +G +IH+ D++LPE S+ S Sbjct: 120 --VVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKLPEGVSATSH 170 >gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri A1501] gi|166223708|sp|A4VPC5|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 104/164 (63%), Gaps = 2/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N +PA+IYG + P+ I++ AKD +K L ++ + +L Sbjct: 6 LNAQVRSDLGKGASRRLRRNAALVPAVIYGGNNAPQSISILAKDFAKLLENEASFSHVLN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQGG 125 L++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+ KQGG Sbjct: 66 LNVDGQNESVLIKALQRHPAKGFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKKQGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ +EV + C ++P+ I VD+ ++++G +HM DI+LP+ Sbjct: 126 EILHNLNEVEVSCMPQDLPEFIEVDMANVEVGQVLHMTDIKLPK 169 >gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] Length = 188 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 1/159 (0%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P I+YG +DP PI + D+ K+L + F+ T+ L + G + V VI ++ Q D V D Sbjct: 2 VPGIVYGGDNDPLPIQIPFNDLLKKLKAGRFLATLWNLKVDGHDDVRVICRNVQRDVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H D +++ S V +H+PV FINE+ +PGIK+GG L VV +V L A +IP+ I Sbjct: 62 LPTHLDLMRLRRTSRVNLHIPVEFINEDAAPGIKRGGVLTVVRADVELNVLAGDIPEKIV 121 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VDL L+IGD++ + + LP+ + IA + AP Sbjct: 122 VDLTGLEIGDTVTISMVNLPDGVKPTIDRDFVIANVSAP 160 >gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter denitrificans OCh 114] gi|122972523|sp|Q161I5|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114] Length = 212 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R++G +P I++G DP PI + + K+L F +T+ + Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRFKSTLFNM 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q V D+ H DF+++ + + + + V E+ +PG+K+GG Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAVEVEGEDVAPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L ++ EV L+ A +IPD +T+D+++++IGD+I + + LPE + IA + A Sbjct: 128 LTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNITISSVNLPEGAKPTIDRDFVIAQLSA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter cryohalolentis K5] gi|109893383|sp|Q1QED5|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5] Length = 224 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 91/153 (59%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 GKG++R LRK +PAIIYG P I++ ++ K L + F + ILTL++ E V Sbjct: 19 GKGASRRLRKQNLVPAIIYGGGEQPTAISIKINELVKSLEFEAFFSHILTLNVDGEEHQV 78 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + KD Q P +HADF +V +G + ++VPV F ++PG K GG L+ + ++ + Sbjct: 79 VIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPGTKAGGVLSTLVTDIEI 138 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +C + +P+ + +D++ ++IGD + DI LPE Sbjct: 139 VCIPSQLPEYLEIDVSGMEIGDLFRLSDITLPE 171 >gi|254796686|ref|YP_003081522.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] gi|254589925|gb|ACT69287.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] Length = 194 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 3/175 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R +G SA +LR++G +PA++YG + +A+S +D+SK ++ + ++ L + Sbjct: 10 RTSLGGNSADVLRRSGFVPAVVYGKERENMNVAISVRDVSKH-FAVLSGSGVVELSCEGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+PK Y+L PVS +++H DF+ E S+ VP+ F+N KS I+ G LN+V Sbjct: 69 VYKVVPKAYELHPVSSVVLHLDFVFAGEHSS-KFQVPLNFVNSGKSEAIRLGAMLNIVKR 127 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVA 186 V + C A N+P SI VD+ + K+GDSI D+ P+ +++ N +AT+V Sbjct: 128 TVLVRCAAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATVVG 182 >gi|153003001|ref|YP_001377326.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. Fw109-5] gi|166223660|sp|A7H6J6|RL25_ANADF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|152026574|gb|ABS24342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. Fw109-5] Length = 235 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R++ GKG AR LR+ G IPA++YG +P +++ + K + + + T+LTL Sbjct: 6 INAQRREEKGKGPARRLRQKGLIPAVVYGRKQEPTHLSVDPASLLKAIETPHKFNTLLTL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KD+ +DPVS L HADFL+V V V VPV + +S G +GG L Sbjct: 66 KLDGAEKHVLFKDWAVDPVSRKLEHADFLEVKLDEAVKVAVPV--VTSGRSVGQAEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 ++ HEV L + IP I VD+ +LKIG SIH+ + PE + IA + P Sbjct: 124 SLATHEVVLEALPSKIPVRIEVDVTNLKIGQSIHVSQLTPPEGCKLKYSSDYVIAFVAVP 183 >gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] Length = 209 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 1/176 (0%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GK 71 R GKG+AR R+ +P +++G +DP I + + KRL + F +T+ L + G Sbjct: 13 RAGTGKGAARAARRAHMVPGVVFGGDADPLAIQIPYNVLLKRLKAGRFKSTLFNLKVEGH 72 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 + V VI +D Q D V D+ H D +++ S + + +PV FINE + G+K+GG L VV Sbjct: 73 DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECVGLKRGGVLTVVR 132 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + IA I AP Sbjct: 133 AEVELIVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGAKPTIDRDFVIANISAP 188 >gi|49089156|gb|AAT51649.1| PA4671 [synthetic construct] Length = 205 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 105/172 (61%), Gaps = 3/172 (1%) Query: 8 LSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 +++ EV + C ++P+ I VD+ +++G +H+ D++ P K + QL Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAP-KGVELVQL 176 >gi|15599866|ref|NP_253360.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAO1] gi|107099662|ref|ZP_01363580.1| hypothetical protein PaerPA_01000680 [Pseudomonas aeruginosa PACS2] gi|218893768|ref|YP_002442637.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa LESB58] gi|254238589|ref|ZP_04931912.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|254244437|ref|ZP_04937759.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|71153159|sp|Q9HVC4|RL25_PSEAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736352|sp|B7V0L7|RL25_PSEA8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9950927|gb|AAG08058.1|AE004881_1 probable ribosomal protein L25 [Pseudomonas aeruginosa PAO1] gi|126170520|gb|EAZ56031.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|126197815|gb|EAZ61878.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|218773996|emb|CAW29811.1| probable ribosomal protein L25 [Pseudomonas aeruginosa LESB58] Length = 204 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 105/172 (61%), Gaps = 3/172 (1%) Query: 8 LSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 +++ EV + C ++P+ I VD+ +++G +H+ D++ P K + QL Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAP-KGVELVQL 176 >gi|116052816|ref|YP_793133.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa UCBPP-PA14] gi|296391492|ref|ZP_06880967.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAb1] gi|313107333|ref|ZP_07793528.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] gi|122257173|sp|Q02G03|RL25_PSEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115588037|gb|ABJ14052.1| putative ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14] gi|310880030|gb|EFQ38624.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] Length = 204 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 102/164 (62%), Gaps = 2/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQSGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPK 169 >gi|144898693|emb|CAM75557.1| 50S ribosomal protein L25 [Magnetospirillum gryphiswaldense MSR-1] Length = 200 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A +RD+ GKG+AR R+ G++P +IYG DP IA+ + I L+ F T + +D+ Sbjct: 9 AELRDRAGKGAARATRREGKVPGVIYGGKQDPICIAIDPRVIWAELHKPGFKTRLFDVDL 68 Query: 70 GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 H + +D Q PVSD +H D ++VS + V V VPV IN +KSPG+K GG ++ Sbjct: 69 AAGGKHRCLCRDVQFHPVSDQPVHIDLMRVSADAVVHVKVPVHVINADKSPGVKAGGVVS 128 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVAP 187 + HEV + C + IP I +DL +G S+H+ D+ LP T + TIV P Sbjct: 129 LELHEVEVTCAPDLIPSEIVIDLAGKDVGYSVHVNDLGLPAGVTPYHVGAKAGVLTIVPP 188 >gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter arcticus 273-4] gi|109893382|sp|Q4FVB4|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4] Length = 224 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 92/153 (60%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 GKG++R LRK +PAIIYG P I++ ++ K L + F + ILTL++ E V Sbjct: 19 GKGASRRLRKQNLVPAIIYGGGEQPIAISIKINELVKSLEFEAFFSHILTLNVDGEEHQV 78 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + KD Q P +HADF +V +G + ++VPV F ++PG K GG L+ + ++ + Sbjct: 79 VIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPGTKAGGILSTLVTDIEI 138 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +C + +P+ + +D++ ++IGD + DI+LPE Sbjct: 139 VCIPSQLPEYLEIDVSGMEIGDLFRLSDIKLPE 171 >gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas eutropha C91] gi|122313984|sp|Q0AGY6|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91] Length = 202 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++SA R+ G G+ R LR G++P +IYG +PI L KD+ +L + F +IL+ Sbjct: 4 EISANSRNLHGTGANRRLRIQGRLPGVIYGGGGTAQPIDLDHKDLYYKLKTDVFHASILS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ + V+ +D Q+ P ++H DF ++ + + V VP+ FIN + +PG+K GG Sbjct: 64 INVDGKKEQVLLRDVQMHPFKQQVLHIDFQRIRQDQKIHVKVPLHFINADIAPGVKLSGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NITIA 182 ++ V E+ + C ++P+SITVDL+++ G +H D++LPE + L N ++ Sbjct: 124 MISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSDLKLPENVEIPALLRGDNQPVS 183 Query: 183 TIVAPISGS 191 T++ P G Sbjct: 184 TLIMPRGGE 192 >gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] Length = 220 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 102/170 (60%), Gaps = 2/170 (1%) Query: 8 LSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A +R +GKG++R LR++ IPAIIYG +P P+ + KD+ K L ++ F + ++ Sbjct: 7 IEATVRSDLGKGASRRLRRSVDHIPAIIYGAGKEPTPLTIIRKDLEKSLENEAFFSQVID 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ ++ I KD Q P + ++HADFL+V + V VP+ FINE K G+K +GG Sbjct: 67 VNVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVSVPLHFINEEKCHGVKIEGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 + + E+ +LC IP+ I VD+ ++ D +H+ D++LPE S + Sbjct: 127 IIEHMLTELEVLCLPGLIPEYIEVDMENVTTADILHISDLKLPEGVVSTA 176 >gi|114767366|ref|ZP_01446171.1| ribosomal protein L25 [Pelagibaca bermudensis HTCC2601] gi|114540537|gb|EAU43613.1| ribosomal protein L25 [Roseovarius sp. HTCC2601] Length = 178 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P I++G ++P I L ++ KRL + F +T+ L + G + V VI +D Q D V D Sbjct: 2 VPGIVFGGDAEPLAIQLPFNELLKRLKAGRFKSTLFNLKVDGHDDVRVICRDVQRDVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H D +++ S + + + V FINE +PG+K+GG L +V EV L A +IPD IT Sbjct: 62 LPTHFDLMRLRRTSRINLFIHVDFINEETAPGLKKGGVLTIVRQEVELEVLAGDIPDHIT 121 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VDL D +IGD IH+ D+ LP+ + IA I AP Sbjct: 122 VDLADKQIGDVIHISDVTLPDGAKPTIDRDFVIANISAP 160 >gi|331005803|ref|ZP_08329161.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] gi|330420384|gb|EGG94692.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] Length = 213 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L A R+ GKG++R LR+ + +P IIYG P+ I+L KD+ K L ++ Sbjct: 1 MSNEDFVLHAESRELTGKGASRRLRRESSMVPGIIYGGSKKPQMISLLQKDLIKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+++++ VI KD Q P ++ H D L+VS+ T VP+ FINE S Sbjct: 61 FYSHIISVEVDGAAQDVILKDLQRHPAKPLIYHLDLLRVSKTKKFTTRVPLHFINEETSK 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 G+K QGG ++ E+ + C ++P+ I VDL D++IG ++H+ D+ LP+ S+ Sbjct: 121 GVKVQGGMISHSVTELEISCLPADLPEYIEVDLADVEIGQTVHISDLTLPKGVESV 176 >gi|77919599|ref|YP_357414.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter carbinolicus DSM 2380] gi|109893375|sp|Q3A313|RL25_PELCD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77545682|gb|ABA89244.1| LSU ribosomal protein L25P [Pelobacter carbinolicus DSM 2380] Length = 208 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 8/189 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q E +S R+ +GKG+AR LR+ G IPA++YG + + + K ++ + S+ Sbjct: 1 MAQTELNVS--QREGLGKGTARSLRREGLIPAVMYGKGVENCSLVVEPKQLAAIIGSEAG 58 Query: 61 MTTILTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + +++TL G+ VI KD Q+DP+ +H DF + + V VP+ + K Sbjct: 59 LNSLITLK-GEGAFDGKVVILKDMQVDPIRQTPLHVDFQAIDLNAKTHVLVPLVVVG--K 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 S G KQGG L ++ HEV L+C NIP +I VD+ L IGD++H++D++LPE + Sbjct: 116 SEGEKQGGNLQIIRHEVELVCLPANIPANIEVDVTALNIGDALHVQDVQLPEGVEIPQDV 175 Query: 178 NITIATIVA 186 N T+ T+ Sbjct: 176 NFTVVTVTG 184 >gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CMR15] Length = 206 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 108/185 (58%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 IEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITIA 182 +N + ++V + C ++P+ I VDL +L+IG ++H+ D++L + + ++ N +A Sbjct: 122 IVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLSKGVTIVTHGGDENPAVA 181 Query: 183 TIVAP 187 I P Sbjct: 182 NISVP 186 >gi|254464271|ref|ZP_05077682.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] gi|206685179|gb|EDZ45661.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] Length = 207 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 1/176 (0%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GK 71 R GKG+AR R+ G +P ++YG ++P I + ++ K+L + F +T+ L + G Sbjct: 13 RAGTGKGAARAARRAGMVPGVVYGGDAEPLAIQVPFNELLKKLKAGQFKSTLWNLKVEGH 72 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 + V VI +D Q D V D+ H D +++ S + +++ V FINE+K+PGIK+GG L VV Sbjct: 73 DDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLYIHVEFINEDKAPGIKKGGMLTVVR 132 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV L A +IP+ I VDL L IGD I + + LP + + IA I AP Sbjct: 133 PEVELNVTAGDIPEKIVVDLEGLNIGDVITISSVDLPAGAKPVIDRDFVIANISAP 188 >gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] Length = 216 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ ++ I+YG + P P+ + +I K ++ F T+ Sbjct: 4 EFMLNAETRKDLGKGASRRLRRLENKVLGIVYGGKNKPTPVTFAMNEIVKLAENEAFFTS 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 ++ L++ + V+ KD Q P + ++H DFL+VS + +T+ VP F NE+ G+K Sbjct: 64 LVDLNLDGKSEQVVIKDMQRHPARETIMHVDFLRVSAKTKITMQVPFHFTNEDTCHGVKI 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 +GG ++ +++ + C ++P+ I VD+ LK+GD++H+ D+ LP+ S++ Sbjct: 124 EGGSVSHALNDIEITCLPKDLPEYIEVDMAALKVGDNVHLSDLVLPKGVESVALAHGEDH 183 Query: 178 NITIATIVAPISGS 191 ++ ++ + AP G Sbjct: 184 DLLVSAVNAPRGGG 197 >gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] Length = 206 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R GKG++R LR +G++PA+IYG + I + D+ +L + F +I Sbjct: 2 KIEISADKRTLQGKGASRRLRGSGKVPAVIYGGDQAAQSIEMDHNDLFHKLKLEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 LTL + + V+ +D Q+ P ++H DF +V + + + VP+ FIN SPG+K Sbjct: 62 LTLSVAGKKEPVLLRDVQMHPFKKQVLHVDFQRVDKNKKIHMKVPLHFINAEISPGVKTS 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NIT 180 GG + + EV + C ++P+ I+VDL +L G ++H+ D+ LP+ +++ N+ Sbjct: 122 GGIVTHILTEVDITCLPGDLPEFISVDLAELTAGHTLHLSDLVLPKDVETVALAKGDNLP 181 Query: 181 IATIVAPIS 189 +ATIV P S Sbjct: 182 VATIVIPRS 190 >gi|312797356|ref|YP_004030278.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] Length = 205 Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ P I+YG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSQQGTGASRRLRNAGKTPGIVYGAGTEPKLIELDHNALYHALNKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I V+ +D Q P +++H DF +V + +TV VP+ ++N+ SP +K GG Sbjct: 62 LEIAGATEQVLLRDVQYHPFRRLVLHVDFQRVDAKTKITVKVPLHYMNQEGSPAVKLGGG 121 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNITIA 182 + V +E+ + C N+P+ I VDL + ++ S+H +D++LP E T + Q N I Sbjct: 122 VITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKDVKLPAGVELTPHVEQENPVIV 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATLP 186 >gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] Length = 206 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 2/165 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQL 83 R+ G +P +IYG + IAL + +++ L+ + + I + I G + H + ++ QL Sbjct: 24 RRAGLVPGVIYGGKQEAVLIALDPRIVARELHKPGWRSRIYDISIDGSKTEHALLREIQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD+ +H D+ +++EG V V V + F E SPGIK+GG LN+V H V ++ N+ Sbjct: 84 HPVSDVPLHVDYQRLAEGQKVHVEVSITFTGEEVSPGIKRGGVLNIVRHTVDVVADPANM 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIATIVAP 187 P+ + DL+ L I D++ ED++ E + + + N IATI AP Sbjct: 144 PEGFSADLSKLDIHDNVRWEDLKGTEHVTPVQHIPNFVIATIAAP 188 >gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217] gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217] Length = 208 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G +P I++G +P PI + + KRL F +T+ L Sbjct: 8 LQAQERAGTGKGAARAARREGMVPGIVFGGDKEPLPINIPFNALLKRLKKGRFKSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G++ V VI +D Q D V D+ H D +++ + + + + V FIN P +++GG Sbjct: 68 QVEGQDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINHENCPALRKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 L VV +EV L A +IPD +TVDL+ + KIGD + + I LPE + + + I I Sbjct: 128 LTVVRNEVELTVTAGDIPDHLTVDLSKISKIGDVVTISMIDLPEGSEPVIKDRDFVICNI 187 Query: 185 VAP 187 AP Sbjct: 188 SAP 190 >gi|115378654|ref|ZP_01465804.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|310823076|ref|YP_003955434.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] gi|115364320|gb|EAU63405.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|309396148|gb|ADO73607.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] Length = 232 Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M + L A R+ GKG+AR LR G +PA++YG ++ P +A++ K + + + + + Sbjct: 1 MSVDKSSLEAKAREGSGKGAARKLRAQGLVPAVVYGKHLEKPVHVAVNPKAVKQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ L + V+ KDYQ DP+S ++H DF+ V + V V+VP+ + K+ Sbjct: 61 KFNTLIQLKLDSATHQVLLKDYQTDPLSREILHVDFIDVRDNEQVKVNVPLVLVG--KAV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G GG L E+ + IP+ I VD+ LKI ++H+ DI+LP+ S + +N Sbjct: 119 GTADGGLLTQARRELEVWALPQAIPEKIEVDVTPLKIAQALHINDIKLPQGVSVKTNVNY 178 Query: 180 TIATIVAP 187 T+A + AP Sbjct: 179 TLAVVSAP 186 >gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|189042360|sp|A9HC01|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5] gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gluconacetobacter diazotrophicus PAl 5] Length = 206 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 1/164 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R++GQ+PA+IYG +P +AL + + + + + + + + + + ++ QL Sbjct: 24 RRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PVSD IH DF +++ G V V V + F E+KSPGIK+GG LN+V H V + NIP Sbjct: 84 PVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIATIVAP 187 +S TVDL+ L I D++ +D++ + Q+ N IAT+ AP Sbjct: 144 ESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQIPNFVIATVAAP 187 >gi|229586949|ref|YP_002845450.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia africae ESF-5] gi|259646695|sp|C3PP47|RL25_RICAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|228021999|gb|ACP53707.1| 50S ribosomal protein L25 [Rickettsia africae ESF-5] Length = 203 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVLATIIG 184 >gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha JMP134] gi|109893384|sp|Q476G0|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134] Length = 203 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P IIYG +DPK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPGIIYGGAADPKMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 LEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIAT 183 +N + +++ + C ++P+ I VD+ ++++G ++H+ D++LP+ + ++ N IA+ Sbjct: 122 LVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTDLKLPKGVTVVTHGDENPAIAS 181 Query: 184 IVAP 187 I P Sbjct: 182 ISLP 185 >gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] Length = 217 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 100/167 (59%), Gaps = 2/167 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E + A R G+G++R LR+ + IPAIIYG + I++ ++ K L ++ F + Sbjct: 3 QEFLIEAFPRGDQGRGASRRLRREERKIPAIIYGGKKEATAISIWHNELKKALENEAFFS 62 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ILT+++ + VI KD Q P +L HADFL+V + + V+VP+ F+NE +P IK Sbjct: 63 HILTIELEGKKESVILKDLQRHPYKPLLTHADFLRVDKDHEIHVNVPLHFLNEESAPAIK 122 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 QGG N +EV ++C N+P+ + VD+ +++ +H+ D++LP Sbjct: 123 LQGGVANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVHLSDLKLP 169 >gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] Length = 218 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG+AR R++G +P I++G ++P PI + + RL F T+ L Sbjct: 8 LEAQVRTGTGKGAARQARRDGMVPGIVFGGDNEPLPINIPFNKLLTRLRQGRFKATLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q V D+ H D +++ + + + + V E + PG+K+GG Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKINLFINVEVKGEEECPGLKKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V EV L+ A +IP+ +TVD+ L+IGDS + + LPE + IAT+ A Sbjct: 128 LTLVRPEVELVVTAADIPEFVTVDVTGLEIGDSATISRVDLPEGAKPTIDRDFVIATVSA 187 Query: 187 P 187 P Sbjct: 188 P 188 >gi|189184105|ref|YP_001937890.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Ikeda] gi|226736344|sp|B3CTF9|RL25_ORITI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189180876|dbj|BAG40656.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-TILT 66 L +R G SAR LR+ G++P +IY P + K+++K LY K F + T++ Sbjct: 7 LVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAK-LYRKPFFSSTVIQ 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSE-GSTVTVHVPVRFINENKSPGIKQGG 125 L + + V+PK QL PV++ + H DF+ V + G V VP+ F ++KS GIK+GG Sbjct: 66 LQVDDQRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQKVKVPISFEGKDKSLGIKRGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 LN+V V LLCP + IP I D+ ++ +G SI + + LPE Sbjct: 126 YLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPE 169 >gi|194364505|ref|YP_002027115.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia R551-3] gi|194347309|gb|ACF50432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stenotrophomonas maltophilia R551-3] Length = 206 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 5/169 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R+ KG++R LR G IPAI+YG ++P ++L +I ++ F + Sbjct: 3 KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAVSLDHNEIWLAQQNEWFYAS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DFL+V+E +T VP+ FINE+ SP K Sbjct: 63 ILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFLRVNENEKLTASVPLHFINEDTSPAGKA 122 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VV H EVS+ C ++P+SI VDL +LK GD +++ DI+LP+ Sbjct: 123 ADV--VVAHELKEVSISCLPKDLPESIEVDLGELKAGDIVYLSDIKLPK 169 >gi|86156549|ref|YP_463334.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter dehalogenans 2CP-C] gi|109893342|sp|Q2IM61|RL25_ANADE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85773060|gb|ABC79897.1| LSU ribosomal protein L25P [Anaeromyxobacter dehalogenans 2CP-C] Length = 240 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+L L Sbjct: 6 LSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTLLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ +GG L Sbjct: 66 QVEGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVAEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + + P Sbjct: 124 SVAAHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVVFVAVP 183 >gi|34581435|ref|ZP_00142915.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] gi|28262820|gb|EAA26324.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] Length = 203 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFL-EAKTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVLATIIG 184 >gi|23097515|ref|NP_690981.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] gi|71153156|sp|Q8EU33|RL25_OCEIH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|22775738|dbj|BAC12016.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] Length = 215 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 107/184 (58%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+A R+ + K + + +R +G++PA++YG DPK +++ + D+ K + + I+ Sbjct: 3 VKLNATKREDLTKSATKQIRLSGRVPAVVYGKAKDPKNVSVDSVDLVKTVRDEG-RNAII 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L + V V+ DYQ+DP+ D L+HADF V+ + V+V VR E K G K+GG Sbjct: 62 SLQVENSSVDVMLHDYQIDPIKDELLHADFYVVNMSEEMDVNVAVRLDGETK--GEKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L +E+ + NNIP+ I +D++DL +GDS+ + DI++ + + ++A++ Sbjct: 120 VLQQPFYEILVRAKPNNIPEEIVIDVSDLDVGDSVSVADIKVDGNYEILEDPDTSVASVT 179 Query: 186 APIS 189 P + Sbjct: 180 PPTT 183 >gi|157828786|ref|YP_001495028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933514|ref|YP_001650303.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. Iowa] gi|166223715|sp|A8GSZ5|RL25_RICRS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042367|sp|B0BUI7|RL25_RICRO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157801267|gb|ABV76520.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908601|gb|ABY72897.1| LSU ribosomal protein L25P [Rickettsia rickettsii str. Iowa] Length = 203 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFL-EKKTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVLATIIG 184 >gi|157964747|ref|YP_001499571.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia massiliae MTU5] gi|157844523|gb|ABV85024.1| 50S ribosomal protein L25 [Rickettsia massiliae MTU5] Length = 211 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 14 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKIPVSISLEEKEITKYYRKPAFISQLIN 73 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 74 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGVKRGGY 132 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ +ATI+ Sbjct: 133 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFVLATIIG 192 >gi|270159183|ref|ZP_06187839.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|289165989|ref|YP_003456127.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] gi|269987522|gb|EEZ93777.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|288859162|emb|CBJ13091.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] Length = 218 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R +GKG++R LR+ Q+PA+IYG P I + K L +++ +++ Sbjct: 6 LEAQTRTDMGKGASRRLRRLENQVPAVIYGGDKKPTSIHFQHNKVIKALETESIYSSVFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + ++ HVI K Q P +++H D +VS+ + VP+ FINE K+PGIK GG Sbjct: 66 ITVDGKVEHVILKALQRHPYKPVVMHMDLQRVSKTDVLVKLVPIHFINEEKAPGIKAGGI 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +N +V + C A ++P+ I VD++++K+ D +H+ ++LP+ Sbjct: 126 INHTMTQVEVRCQAKDLPEFINVDMSEVKVDDIVHLSHLKLPK 168 >gi|238650660|ref|YP_002916512.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] gi|259646696|sp|C4K1L3|RL25_RICPU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|238624758|gb|ACR47464.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] Length = 203 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVLATIIG 184 >gi|152980425|ref|YP_001354819.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] gi|166223690|sp|A6T2S2|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] Length = 214 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 106/185 (57%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R ++G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 2 KVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ F+N SP +K GG Sbjct: 62 LEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHGG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 ++ V E+ + C +++P+ + VDL +L +G SIH+ DI+LP+ +++ + N TIA Sbjct: 122 IISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTIA 181 Query: 183 TIVAP 187 T P Sbjct: 182 TASVP 186 >gi|134096054|ref|YP_001101129.1| 50S ribosomal protein L25/general stress protein Ctc [Herminiimonas arsenicoxydans] gi|166223689|sp|A4G921|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|133739957|emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC) [Herminiimonas arsenicoxydans] Length = 210 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R+ +G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 2 KVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ FIN SP +K Q G Sbjct: 62 LEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQAG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 ++ V E+ + C N+P+ + VDL L++G SIH+ DI+LP+ ++ + N TIA Sbjct: 122 IISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTIA 181 Query: 183 TIVAP 187 T P Sbjct: 182 TAAVP 186 >gi|220915259|ref|YP_002490563.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] gi|254801032|sp|B8J805|RL25_ANAD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219953113|gb|ACL63497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] Length = 240 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+L L Sbjct: 6 LSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTLLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ +GG L Sbjct: 66 QVDGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVAEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + + P Sbjct: 124 SVATHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVVFVAVP 183 >gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2] Length = 226 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 5/168 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A R GKG++R LR GQ+PAI+YG +DP I L + S+ F +I Sbjct: 3 EHKITATSRKDEGKGASRRLRHAGQVPAIVYGGHADPVSIQLEHERTWLVSQSEWFYASI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+I + V+ +D Q P ++H DF +VS + V VP+ F+N +KSP K Sbjct: 63 LDLEIDGKSEKVLLRDMQRHPYKQRIMHMDFQRVSANEAIRVSVPLHFLNVDKSPAGKTA 122 Query: 125 GKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G VV HE++ + C ++P+ I +DL++L+ GD++H+ ++LP+ Sbjct: 123 GV--VVMHELTQIEVSCLPGDLPEFIDIDLSNLQAGDTMHLSQVQLPK 168 >gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas europaea ATCC 19718] gi|71153155|sp|Q82TQ5|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718] Length = 198 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R G G+ R LR G++P +IYG D + I L KD+ +L + F +I Sbjct: 2 QIEISANSRKLHGTGANRRLRSQGRLPGVIYGGNGDAQSIELDHKDLYYKLKMEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L++ I + V+ +D Q+ P ++H DF +V + + V VP+ FIN + +PG+K Sbjct: 62 LSISIDGKKEQVLLRDVQMHPFKQQVLHIDFQRVRQDQKIHVKVPLHFINADIAPGVKLS 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NIT 180 GG ++ V E+ + C ++P+ ITVDL+ + G ++H+ D+ L E + L N+ Sbjct: 122 GGMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSDLILSENVEIPALLKGDNLP 181 Query: 181 IATIVA 186 +AT++A Sbjct: 182 VATLIA 187 >gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera sp. 301] gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera sp. 301] Length = 202 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 100/166 (60%), Gaps = 5/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +++AV RD G G++R LR+ G +P ++YG + + ++AK++ + F ++L+ Sbjct: 4 EINAVKRDVKGTGASRRLRRAGTVPGVVYGAGKEAVTLEINAKELFLEFRHEAFHASVLS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + +V+ +D+Q+ PV + + H DF +VS + V VP FIN + +PG+K GG Sbjct: 64 LNLDGKKENVLLRDFQMHPVRNTIQHIDFQRVSATEKIHVKVPFHFINADIAPGVKTGG- 122 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +V H E + C A ++P+ + VDL L++G SIH+ I+L + Sbjct: 123 -GIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQIKLAK 167 >gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] Length = 215 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 103/172 (59%), Gaps = 6/172 (3%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ GKG++R LR+ ++PAI+YG P I+L KD++K L ++ F + ++ Sbjct: 7 LHAKGREDTGKGASRRLRRLAAEVPAIVYGGKKTPAQISLIHKDVAKALENEAFYSHVIA 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + VI KD Q P+ +++H DFL+V++ + + P+ FINE+ G+K GG Sbjct: 67 LDIDGKSEDVILKDVQRHPIKPVILHLDFLRVNKKTLLQTKAPIHFINEDICVGVKIGGG 126 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 L + H E+ + C ++P+ I VD+ ++IG ++H+ DI P+ S++ Sbjct: 127 L--IAHTMTEIDISCLPQDLPEYIEVDMAAVEIGQTLHISDIVFPKGVESVA 176 >gi|240080344|ref|ZP_04724887.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA19] gi|268596490|ref|ZP_06130657.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] gi|268550278|gb|EEZ45297.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] Length = 190 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 TI Sbjct: 184 TI 185 >gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus xanthus DK 1622] gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus xanthus DK 1622] Length = 220 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M L A R+ GKG AR LR G IPA++YG ++ P I+++ K + + + + + Sbjct: 1 MSVNTSTLEAKPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHISVNPKAVRQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ + + V+ KDYQ+DPV+ ++HADFL V V V+VP + ++ Sbjct: 61 KFNTLIQIKVEGGDRQVLLKDYQMDPVTRAILHADFLDVRPTDKVKVNVP--LVLSGRAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L E+ + IP+ I VD+ +KI + +H+ D++LPE S + +N Sbjct: 119 GVADGGLLTQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHINDLKLPEGVSVKTNVNY 178 Query: 180 TIATIVAP 187 T+A I AP Sbjct: 179 TLAVISAP 186 >gi|15892855|ref|NP_360569.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia conorii str. Malish 7] gi|71153165|sp|Q92H40|RL25_RICCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15620041|gb|AAL03470.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7] Length = 203 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 6 ELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+K+GG Sbjct: 66 LTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGVKRGGY 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S ++ +ATI+ Sbjct: 125 FNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTNKEFVLATIIG 184 >gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] gi|172047325|sp|A5EWV0|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] Length = 225 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 107/186 (57%), Gaps = 4/186 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV+R++ GKG++R LR+ G +PAIIYG ++P+ IA+ ++ K + +F + I+ L Sbjct: 10 LHAVVREEQGKGASRRLRRQGLVPAIIYGGNTEPQAIAIKQDELKKNAKNHSFFSQIINL 69 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 I G+E ++ +D Q + H DF ++ G +T V + F+ E ++PGIK GG Sbjct: 70 KIDGQEDQEILVRDVQHHIYKPLFQHFDFQRIVRGQEITATVLLEFVGEERAPGIKTDGG 129 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT--IAT 183 ++ V ++C + +P+ I VDL++ IGD I + D++LPE + + AT Sbjct: 130 IVSRHMTTVEVICRPSLLPEYIAVDLSEANIGDIITLADLKLPEGVRLVGDMEDEEFAAT 189 Query: 184 IVAPIS 189 +V IS Sbjct: 190 VVVQIS 195 >gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA 1090] gi|194098189|ref|YP_002001237.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae NCCP11945] gi|239998640|ref|ZP_04718564.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae 35/02] gi|240016200|ref|ZP_04722740.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA6140] gi|240115294|ref|ZP_04729356.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID18] gi|240123136|ref|ZP_04736092.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID332] gi|240125385|ref|ZP_04738271.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-92-679] gi|254493356|ref|ZP_05106527.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|260440889|ref|ZP_05794705.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|268594494|ref|ZP_06128661.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268600974|ref|ZP_06135141.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268681764|ref|ZP_06148626.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268683986|ref|ZP_06150848.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291044213|ref|ZP_06569922.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|68053023|sp|Q5F9F4|RL25_NEIG1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736341|sp|B4RKF2|RL25_NEIG2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|59717778|gb|AAW89183.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933479|gb|ACF29303.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae NCCP11945] gi|226512396|gb|EEH61741.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|268547883|gb|EEZ43301.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268585105|gb|EEZ49781.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268622048|gb|EEZ54448.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268624270|gb|EEZ56670.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291011107|gb|EFE03103.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|317163911|gb|ADV07452.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae TCDC-NG08107] Length = 190 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|239996494|ref|ZP_04717018.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii ATCC 27126] Length = 210 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 95/175 (54%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEANFKLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L +++ ++V V+ KD Q P + H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLEINLDGKVVEVLVKDMQRHPFKPKITHIDFQRVIAGQDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +K GG E+ + C N+P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCLPKNLPEFIEVDMAGVEMGQTLHLSDLTLPAGVSSVE 175 >gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] Length = 179 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 1/159 (0%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P +++G ++P I + ++ K+L + F +T+ L + G+E V VI +D Q D V D Sbjct: 2 VPGVVFGGDAEPMSIQIPFNELLKKLKAGRFKSTLWNLKVEGQEDVRVICRDVQRDVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H D +++ S V + VPV FINE +PGIK+GG L V EV L+ A +IP+ + Sbjct: 62 LPTHFDLMRLRRTSKVNLFVPVEFINEEAAPGIKRGGVLTAVRPEVELVVTAGDIPEKLV 121 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VDL L IGD++ + + +PE + +A I AP Sbjct: 122 VDLTGLNIGDTVTISSVTMPEGAKPTIDRDFVVANISAP 160 >gi|87122995|ref|ZP_01078855.1| probable ribosomal protein L25 [Marinomonas sp. MED121] gi|86161732|gb|EAQ63037.1| probable ribosomal protein L25 [Marinomonas sp. MED121] Length = 192 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R + GKG++R LR ++PA+IYG + P+ I + ++ K +++F TT++ + Sbjct: 5 INAVARSEEGKGASRRLRLANKVPAVIYGGDAAPQSITFAENELKKITENQDFFTTVVEV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 + VI K Q P S ++H DFL+V E +T +P+ F+ S G+K QGG+ Sbjct: 65 VTDGKAEKVIVKALQRHPASPAVMHVDFLRVDEARVITTRIPLNFVGAATSEGVKSQGGR 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L+V + C N+P ++ VD ++GD H+ D +LPE Sbjct: 125 LSVEAKLAEVRCLPANLPAALEVDCTKAQLGDIFHLSDAQLPE 167 >gi|226946187|ref|YP_002801260.1| 50S ribosomal protein L25/general stress protein Ctc [Azotobacter vinelandii DJ] gi|259646681|sp|C1DEV6|RL25_AZOVD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226721114|gb|ACO80285.1| ribosomal protein L25 [Azotobacter vinelandii DJ] Length = 198 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 101/163 (61%), Gaps = 2/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N Q+PA+IYG +P+ I++ AKDI+K + + + ++T Sbjct: 6 LNAEVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSISILAKDITKLIEDEAAFSHVIT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I V+ K Q P ++HADFL+V ++ VP+ F+N S G+K QGG Sbjct: 66 LNIAGATETVLIKALQRHPSKAAVMHADFLRVVADHKLSAVVPLHFVNAETSVGVKQQGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +++ V EV + C ++P+ I VDL +++G +H+ ++ +P Sbjct: 126 EVSHVISEVEVSCLPKDLPEFIEVDLAQVEVGQIVHLSNLSVP 168 >gi|254804741|ref|YP_003082962.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|261400188|ref|ZP_05986313.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296313504|ref|ZP_06863445.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|313668661|ref|YP_004048945.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica ST-640] gi|254668283|emb|CBA05191.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|269210188|gb|EEZ76643.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296839947|gb|EFH23885.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|309379435|emb|CBX22002.1| 50S ribosomal protein L25 [Neisseria lactamica Y92-1009] gi|313006123|emb|CBN87584.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica 020-06] gi|325127982|gb|EGC50881.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis N1568] gi|325133985|gb|EGC56640.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13399] Length = 190 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|240013762|ref|ZP_04720675.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI18] gi|240120830|ref|ZP_04733792.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID24-1] gi|293399412|ref|ZP_06643565.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] gi|291609981|gb|EFF39103.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] Length = 190 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25/general stress protein Ctc [Dechloromonas aromatica RCB] gi|109893357|sp|Q479M1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB] Length = 203 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L+A R G G++R LR ++P I+YG + P+ I + D+ +L + F ++I Sbjct: 2 QFELNAQARTLQGTGASRRLRHAAKVPGIVYGGAAAPQSIEVDHNDLLLKLKKEAFHSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L I + V+ +D Q+ +++H DF +V + V VP+ F+NE +PG+K Sbjct: 62 INLIIDGKKEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFVNEEVAPGVKLN 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG +N V EV + C A ++P+ I VDL+ LKIG SIH+ ++LP+ Sbjct: 122 GGLVNHVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPK 167 >gi|255020869|ref|ZP_05292925.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] gi|254969660|gb|EET27166.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] Length = 209 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 96/168 (57%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A RD G+ +R LR+ GQ+PA++YG+ P++L A+ + K L + Sbjct: 1 MTDVQFSIPARERDGHGRRPSRRLRREGQVPAVLYGDGKPANPLSLEARVLRKLLADERV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ++TL+ + +D Q+ P + ++H DFL+V G VT+HVP+ F NE G Sbjct: 61 FTNVITLEFPDRKETALIRDLQMHPYKEEVLHVDFLRVHAGERVTLHVPIHFENEATCVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +K GG L+ EV + P +P++I VD+ L++G+SIH+ I +P Sbjct: 121 VKSGGVLHRALVEVEVEAPVGQLPEAIVVDIAQLQVGESIHLSQITVP 168 >gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC) rplY [Thiomonas sp. 3As] gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] Length = 205 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR+ G+ P IIYG P+ I L + L + F +++L Sbjct: 2 KVVAFERSLQGTGASRRLRRAGKTPGIIYGGEQAPQMIELDHNALYHALKKEQFHSSVLQ 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I + V+ +DYQ+ P +++H DF +V G +++ VP+ F SP +K G Sbjct: 62 LEIAGKSSQVLLRDYQMHPFKQLVLHVDFQRVDAGHKISMKVPLHFTGAENSPAVKLSHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIAT 183 +N V EV + C + +P+ I VDL++L + S+H+ D++LP+ S ++ N + T Sbjct: 122 LVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVNDLKLPKGVSVLTHGVDNPAVVT 181 Query: 184 IVAP 187 + P Sbjct: 182 VSPP 185 >gi|190572919|ref|YP_001970764.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia K279a] gi|190010841|emb|CAQ44450.1| putative 50S ribosomal protein L25 [Stenotrophomonas maltophilia K279a] Length = 205 Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 99/169 (58%), Gaps = 5/169 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F + Sbjct: 3 KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYAS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ F+NE+ SP K Sbjct: 63 ILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPAGKA 122 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VV H EV++ C ++P+SI VDL +LK GD +++ DI+LP+ Sbjct: 123 ADV--VVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSDIKLPK 169 >gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus taiwanensis LMG 19424] gi|226736303|sp|B2AGT7|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus taiwanensis LMG 19424] Length = 205 Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 107/184 (58%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 LEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIAT 183 +N + +++ + C ++P+ I VD+ +++G ++H+ D++LP+ + ++ N IA+ Sbjct: 122 LVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSDLKLPKGVTVITHGDDNPAIAS 181 Query: 184 IVAP 187 I P Sbjct: 182 ISQP 185 >gi|71734821|ref|YP_273262.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482001|ref|ZP_05636042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627924|ref|ZP_06460878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647281|ref|ZP_06478624.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 2250] gi|298485675|ref|ZP_07003754.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|109893378|sp|Q48MW0|RL25_PSE14 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71555374|gb|AAZ34585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159701|gb|EFI00743.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320327397|gb|EFW83411.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330868892|gb|EGH03601.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881888|gb|EGH16037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330988611|gb|EGH86714.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008861|gb|EGH88917.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 203 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] Length = 189 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR +G+IPA+IYG D I+LS ++ + S T ++ L+I + +V+ +D Sbjct: 1 SRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLIELEIDNKKEYVLMRD 60 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q PV+D + H DF + G+ + + VP+ F NE K GIK+GG LN++ +S+ C Sbjct: 61 VQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSP 120 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRL-PEKTSSMSQLNITIATI 184 I +I +DL+ L G SIH+ D++L PE +M + N I TI Sbjct: 121 KAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTI 165 >gi|330961721|gb|EGH61981.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. maculicola str. ES4326] Length = 203 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 114/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFVNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ ++ ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGNDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|66044196|ref|YP_234037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae B728a] gi|75503328|sp|Q4ZXX3|RL25_PSEU2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|63254903|gb|AAY35999.1| Ribosomal protein L25 [Pseudomonas syringae pv. syringae B728a] Length = 204 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGSLEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|308389048|gb|ADO31368.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha710] gi|325130024|gb|EGC52817.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis OX99.30304] Length = 190 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 4/180 (2%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ L Sbjct: 6 QASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIKLS 65 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKL 127 + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG++ Sbjct: 66 LNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGGRV 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIATI 184 +++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ +AT+ Sbjct: 126 SLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVATV 185 >gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] Length = 228 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 101/172 (58%), Gaps = 1/172 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A RD+ G ++R LR+ G++PAI+YG +D +PI L + L F + ILT+ Sbjct: 7 IEAEKRDEQGSSASRRLRRAGKLPAILYGGENDAQPITLDHNAMVHNLKHDAFYSHILTV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + I +D Q P + H D L+VS + VHVP+ F NE + G+K GG + Sbjct: 67 KLDGKSEKAILRDVQRHPFKPTIYHVDLLRVSANQPIRVHVPLHFHNEEECKGVKLGGGM 126 Query: 128 -NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + + +++ + C ++P+SI +D+ ++ +GD+IH+ +++LP+ S++ ++ Sbjct: 127 VSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHISELKLPKGVESVALMH 178 >gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Lens] gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Paris] gi|68053068|sp|Q5WTE8|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053069|sp|Q5X1N8|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053082|sp|Q5ZS67|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris] gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens] gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b] Length = 219 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 5/177 (2%) Query: 7 KLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ +++ Sbjct: 5 QLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIYSSVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGIK GG Sbjct: 65 DITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGIKAGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + +V + C A ++P+ I VD++ + + D +H+ D++LP+ QL + +A Sbjct: 125 IVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGV----QLTVDVA 177 >gi|298368586|ref|ZP_06979904.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] gi|298282589|gb|EFI24076.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] Length = 190 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 103/182 (56%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R++ G G++R LR+ GQIPAI+YG P I++ K I L ++F T ++ Sbjct: 4 EIQAAIREQQGTGASRRLRREGQIPAILYGEDQKPISISVDHKTIFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + + VI +D+Q+ P + H DF V + + VP+ +N S +K QGG Sbjct: 64 LALNGKTYDVIVRDFQMHPFRREVQHIDFQVVKANQLLRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L +NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|237799721|ref|ZP_04588182.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022576|gb|EGI02633.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] Length = 204 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGKKQNVIIKALQRHPAKGHVLHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|15676772|ref|NP_273917.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis MC58] gi|161869809|ref|YP_001598978.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis 053442] gi|304387809|ref|ZP_07369983.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|71153154|sp|Q9JZW3|RL25_NEIMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042363|sp|A9M423|RL25_NEIM0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7226114|gb|AAF41287.1| 50S ribosomal protein L25 [Neisseria meningitidis MC58] gi|161595362|gb|ABX73022.1| 50S ribosomal protein L25 [Neisseria meningitidis 053442] gi|254670387|emb|CBA05900.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] gi|261392771|emb|CAX50347.1| 50S ribosomal protein L25 [Neisseria meningitidis 8013] gi|304338074|gb|EFM04210.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|316985770|gb|EFV64714.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325135916|gb|EGC58526.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M0579] gi|325137740|gb|EGC60315.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis ES14902] gi|325139971|gb|EGC62500.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis CU385] gi|325198077|gb|ADY93533.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis G2136] gi|325200439|gb|ADY95894.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325202337|gb|ADY97791.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240149] gi|325203949|gb|ADY99402.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240355] gi|325206289|gb|ADZ01742.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M04-240196] gi|325207910|gb|ADZ03362.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NZ-05/33] Length = 190 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|330951110|gb|EGH51370.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae Cit 7] Length = 204 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGTLEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|240112553|ref|ZP_04727043.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae MS11] gi|240117581|ref|ZP_04731643.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID1] gi|268598621|ref|ZP_06132788.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268603284|ref|ZP_06137451.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] gi|268582752|gb|EEZ47428.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268587415|gb|EEZ52091.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] Length = 190 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTAVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25/general stress protein Ctc [Thiobacillus denitrificans ATCC 25259] gi|109893403|sp|Q3SLR4|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259] Length = 201 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ G G++R LR G++P I+YG + P I L + L + F ++ Sbjct: 2 EIEVIASKRELQGTGASRRLRHAGKVPGIVYGGSTAPVQIELDHNALYHALRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L+L + V+ +D Q P ++H DF +V + + V VP+ F+N SPG+K Sbjct: 62 LSLSVDGAKESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFLNAEVSPGVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GGK + + +E+ + C ++P+ I VD+ L++G SIH D+ LP E + + Q N Sbjct: 122 GGKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPAGVELVAHVKQENPA 181 Query: 181 IATIVAPISG 190 +A I AP G Sbjct: 182 VAVIHAPKGG 191 >gi|148546001|ref|YP_001266103.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida F1] gi|166223707|sp|A5VYF9|RL25_PSEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148510059|gb|ABQ76919.1| LSU ribosomal protein L25P [Pseudomonas putida F1] gi|313497087|gb|ADR58453.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1] Length = 197 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 100/161 (62%), Gaps = 2/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHSLSIPAVVYGGDKEAQSLTILAKEITKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +VI K Q P ++HADF++V G +T VPV FINE ++P +K+GG++ Sbjct: 66 NVDGVKQNVIIKAMQRHPAKQFIMHADFVRVVAGQKLTAKVPVHFINE-EAP-VKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + V E+ + C A ++P+ I VDL + +IG IH+ D++ P Sbjct: 124 SHVESEIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAP 164 >gi|289678416|ref|ZP_06499306.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae FF5] gi|302186450|ref|ZP_07263123.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae 642] gi|330899761|gb|EGH31180.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941708|gb|EGH44465.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. pisi str. 1704B] gi|330972808|gb|EGH72874.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aceris str. M302273PT] Length = 204 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|104780084|ref|YP_606582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas entomophila L48] gi|166223705|sp|Q1IEY7|RL25_PSEE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|95109071|emb|CAK13767.1| 50S ribosomal subunit protein L25 (General stress protein CTC) [Pseudomonas entomophila L48] Length = 198 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 100/162 (61%), Gaps = 2/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHSANIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV F+ E ++P IK+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFVGE-EAP-IKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + C A ++P+ I VDL+ ++G IH+ D++ P+ Sbjct: 124 SHVVSEIEVSCEAKDLPEFIEVDLSKAEVGTIIHLSDLKAPK 165 >gi|319638120|ref|ZP_07992883.1| 50S ribosomal protein L25 [Neisseria mucosa C102] gi|317400393|gb|EFV81051.1| 50S ribosomal protein L25 [Neisseria mucosa C102] Length = 190 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGEAKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVIALPANIPAFLELDCTSVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|261379039|ref|ZP_05983612.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] gi|269144490|gb|EEZ70908.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] Length = 190 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|121634651|ref|YP_974896.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis FAM18] gi|166223696|sp|A1KTB7|RL25_NEIMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120866357|emb|CAM10100.1| hypothetical protein NMC0817 [Neisseria meningitidis FAM18] gi|254673308|emb|CBA08446.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha275] gi|325132289|gb|EGC54982.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M6190] gi|325142126|gb|EGC64551.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 961-5945] gi|325144239|gb|EGC66545.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240013] Length = 190 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|146306088|ref|YP_001186553.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina ymp] gi|166223706|sp|A4XR55|RL25_PSEMY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145574289|gb|ABP83821.1| LSU ribosomal protein L25P [Pseudomonas mendocina ymp] Length = 201 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 105/164 (64%), Gaps = 2/164 (1%) Query: 8 LSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ + +L Sbjct: 6 LNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSHVLA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ +V+ K Q P ++HADF +V G +T HVP+ FINE + G+K QGG Sbjct: 66 VNVAGATENVVIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEATAVGVKQQGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +++ +EV + C ++P+ I VD+ +++G ++HM D++LP+ Sbjct: 126 EISHTINEVEVSCLPKDLPEFIEVDMAAVEVGQTVHMSDLKLPK 169 >gi|312144320|ref|YP_003995766.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] gi|311904971|gb|ADQ15412.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] Length = 226 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R + GKG AR +R++G+IP ++YG DPK I L DI K L+S + + D G+ Sbjct: 10 LRTESGKGVARKIRRDGKIPGVVYGRGKDPKSIKLDPSDIEKLLFSNAIIDLTVADDDGE 69 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 E VI KD+Q + L+H DF +S +TV VP+ E + G+ GG L + Sbjct: 70 EST-VIIKDFQKSVIKRELLHVDFQYISMDEKITVSVPLHL--EGTAAGVHDGGVLQQLL 126 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + IP IT+D++DL++GDS+ D+ LPE ++ + I T+V P Sbjct: 127 RNVDIDALPAEIPSEITIDISDLEMGDSLSAADLDLPEGIDLVTDSSEVIVTVVTP 182 >gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby] gi|296108297|ref|YP_003619998.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] gi|166223693|sp|A5IAS4|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding protein [Legionella pneumophila str. Corby] gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] Length = 219 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ +++ Sbjct: 5 QLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIYSSVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGIK GG Sbjct: 65 DITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGIKAGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + +V + C A ++P+ I VD++ + + D +H+ D++LP+ Sbjct: 125 IVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPK 168 >gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] gi|241319620|gb|EER56050.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] Length = 190 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP+I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPSILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|70732481|ref|YP_262244.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf-5] gi|109893379|sp|Q4K689|RL25_PSEF5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68346780|gb|AAY94386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas fluorescens Pf-5] Length = 199 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 111/184 (60%), Gaps = 6/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + I+ Sbjct: 6 LNAEVRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +V+ K Q P ++HADF++V G +T VPV FINE + +K+GG+ Sbjct: 66 LNVGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINE--AAPVKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN---ITIAT 183 ++ V E+ + C ++P+ I VDL D +IG +H+ DI+ P+ ++ + + +A Sbjct: 124 ISHVIAEIEVSCLPKDLPEFIEVDLADAEIGTIVHLSDIKAPKGVEFVALAHGNDLAVAN 183 Query: 184 IVAP 187 + AP Sbjct: 184 VHAP 187 >gi|330811725|ref|YP_004356187.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379833|gb|AEA71183.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 200 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 102/166 (61%), Gaps = 3/166 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + Sbjct: 3 EFTLNAEVRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L+IG +V+ K Q P ++HADF++V G +T VPV F+ E + IK+ Sbjct: 63 IIELNIGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVGE--AAPIKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG+++ V E+ + C ++P+ I VDL D ++G IH+ D++ P+ Sbjct: 121 GGEISHVVSEIEVTCLPKDLPEFIEVDLADAEVGTIIHLSDLKAPK 166 >gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis Z2491] gi|71153153|sp|Q9JUX7|RL25_NEIMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121051996|emb|CAM08305.1| hypothetical protein NMA1094 [Neisseria meningitidis Z2491] gi|319410237|emb|CBY90577.1| 50S ribosomal protein L25 [Neisseria meningitidis WUE 2594] Length = 190 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] Length = 209 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 97/173 (56%), Gaps = 7/173 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 2 KIIAYTRAEIGSGASRRLRAAGMAPGIVYGGNSEPLNIKLDHNALFYALKREAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I + V+ +D+Q+ +++H DF +V + V VP+ F+NE+ S K G Sbjct: 62 LEIDGKNQQVLLRDFQVHAYKPVVLHVDFQRVDANQKINVKVPLHFVNEDASSAKKSG-- 119 Query: 127 LNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 VV H V+ L C N+P I VDL +L+IG +IH+ D++LPE +++S Sbjct: 120 --VVHHAVTELEISCLPANLPAFIEVDLGNLEIGQTIHLGDLKLPEGVTAISH 170 >gi|332140914|ref|YP_004426652.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] gi|226736275|sp|B4RSW4|RL25_ALTMD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|327550936|gb|AEA97654.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] Length = 210 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 95/175 (54%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEAIFNLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V V+ KD Q P ++H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLTLNLDGKPVEVLVKDMQRHPYKPKIMHIDFQRVIAGEDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +K GG E+ + C ++P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCQPKDLPEFIEVDMAAVEMGQTVHLSDLTLPAGVSSVE 175 >gi|240127840|ref|ZP_04740501.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-93-1035] gi|268686237|ref|ZP_06153099.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] gi|268626521|gb|EEZ58921.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] Length = 190 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSMLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomicrospira crunogena XCL-2] gi|109893402|sp|Q31IN4|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2] Length = 193 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL-YSKNFMTTILT 66 +A +R + GKG++R LR G++PAIIYG D K IAL + I + L + ++LT Sbjct: 5 WTAELRTEEGKGASRRLRHAGKVPAIIYGGDVDAKSIALKSNQIERALKLDVDLYNSVLT 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+ + + I KD Q P + + H DF + S+ + VT VP++F + SPG+K GG Sbjct: 65 LEGAGDAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPLKFKGKESSPGVKMGGL 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIATI 184 ++ + V + C A ++P +I VD+++L+ G ++ + + LP+ K ++++ N Sbjct: 125 MSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKGVKLTALTHGNTDYDQA 184 Query: 185 VAPIS 189 V IS Sbjct: 185 VVGIS 189 >gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha H16] gi|122947171|sp|Q0KEP9|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16] Length = 205 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 LEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIAT 183 +N + +++ + C ++P+ I VDL +++ ++H+ DI+LP+ + ++ N +A+ Sbjct: 122 IVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSDIKLPKGVTVITHGDDNPAVAS 181 Query: 184 IVAP 187 I P Sbjct: 182 ISQP 185 >gi|325277193|ref|ZP_08142836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] gi|324097679|gb|EGB95882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] Length = 199 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 101/162 (62%), Gaps = 2/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHSASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV FINE ++P +K+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINE-EAP-VKKGGEV 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ Sbjct: 124 SHVESQIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPK 165 >gi|71279934|ref|YP_270232.1| 50S ribosomal protein L25/general stress protein Ctc [Colwellia psychrerythraea 34H] gi|109893355|sp|Q47Y88|RL25_COLP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71145674|gb|AAZ26147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Colwellia psychrerythraea 34H] Length = 211 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +GKG++R LR ++PAI+YG +P + L K++ + + F + +LTL Sbjct: 7 LEAEVRTDLGKGASRRLRHANKVPAILYGENEEPISLTLEHKNVFRAQQEEAFYSQVLTL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V + KD Q P +++H DFL++ V + P+ F+NE+++ K G + Sbjct: 67 NIAGKPVECLIKDMQRHPFKQVVMHLDFLRIDAKHAVHANAPIHFLNEDEAA--KTGANI 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 + +E+++ C ++P+ I++DL L++G +IH+ D+ P +S Sbjct: 125 SHHMNEIAITCLPKDLPEFISIDLAGLELGQTIHLSDVTFPAGVTS 170 >gi|330975570|gb|EGH75636.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 204 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAASSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|261380302|ref|ZP_05984875.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] gi|284796815|gb|EFC52162.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] Length = 190 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|167031780|ref|YP_001667011.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida GB-1] gi|189042366|sp|B0KND5|RL25_PSEPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166858268|gb|ABY96675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida GB-1] Length = 197 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 99/162 (61%), Gaps = 2/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHAASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAYSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV FI E ++P +K+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFIGE-EAP-VKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + C A ++P+ I VDL + ++G IH+ D++ P+ Sbjct: 124 SHVVSEIEVSCEAKDLPEFIEVDLANAEVGTIIHLSDLKAPK 165 >gi|225076511|ref|ZP_03719710.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] gi|224952190|gb|EEG33399.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] Length = 190 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGESQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LYLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQVVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V + NIP + +D + GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTSVEVAAFPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] Length = 211 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 4/195 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA++R GKG++R LR+ G +PAI+YG P+A+ D+ K +F Sbjct: 1 MSEYAYTLSAIVRQDSGKGASRRLRREGLVPAIVYGGEGAALPVAVKQDDLVKFGRFDSF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+ L + G+ V VI +D Q + H DF +V G + V + F NE+ S Sbjct: 61 YSQIICLKVEGQGDVEVIVRDVQRHLYKPLYQHMDFQRVVRGQELQATVSLHFTNEDTSV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQ 176 G+K GG + + ++C N+P+ I VD+ ++ +GD IH+ D++LP+ + + Sbjct: 121 GVKAGGIVEHHLNSAEIVCLPRNLPEYIEVDMANVALGDVIHLRDLKLPQGVRLLHDDDR 180 Query: 177 LNITIATIVAPISGS 191 +A I P G+ Sbjct: 181 AEAVVAQITHPNRGA 195 >gi|255065136|ref|ZP_05316991.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] gi|255050557|gb|EET46021.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] Length = 190 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ +A Sbjct: 124 RVSLLNTTVEVVALPANIPAYLDLDCTKVVAGDILHLSDIQLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT] gi|122985595|sp|Q1H3J2|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT] Length = 207 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 1/162 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R+ G ++R LR+ G +P ++YG + + + K++ + F +IL L Sbjct: 5 IKATKREGKGTSASRRLRRAGNVPGVVYGGDKEAVSLEFNHKELFLEFRHETFHASILNL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 ++ + V+ +DYQL PV + + H DF +VS V V VP+ FIN + +PG+K GG Sbjct: 65 EVDGQKEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPLHFINADIAPGVKLAGGI 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + E + C ++P+ I VDL++L+ G SIH+ I+LP Sbjct: 125 VTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKLP 166 >gi|88861339|ref|ZP_01135969.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] gi|88816605|gb|EAR26430.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] Length = 200 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 2/168 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R ++G G++R LR+ G++PAI+YG + + L+ K++ K + F Sbjct: 1 MSNNTYTLDAELRVELGTGASRRLRREGKVPAILYGADKEAVSLVLAHKEVIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P ++ H DF +V + VP FINE K+ Sbjct: 61 YTHILTLNLNGEKVEVILKDMQRHPFKPVVTHLDFQRVDASHKIHTKVPFHFINEEKA-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 K G + EV + C N+P+ I VD+ +++G ++H+ D+ LP Sbjct: 119 TKLGATVAHHVTEVEITCLPANLPEFIEVDVATIEVGATLHLSDVALP 166 >gi|320325684|gb|EFW81745.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. B076] Length = 203 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P +K+ Sbjct: 63 IIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-VKK 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG+++ E+ + C ++P+ I V+L L++GD++H+ +++ P E + ++ Sbjct: 121 GGEISHTTTELEVTCLPKDLPEFIEVNLGALEVGDNVHLSELKAPKGVEFVALAHGTDLA 180 Query: 181 IATIVAP 187 IA + AP Sbjct: 181 IANVHAP 187 >gi|170723623|ref|YP_001751311.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida W619] gi|226736353|sp|B1JEQ2|RL25_PSEPW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169761626|gb|ACA74942.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida W619] Length = 198 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 102/162 (62%), Gaps = 2/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQVRSDLGKGASRRLRHSLNIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV FINE ++P +K+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINE-EAP-VKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ Sbjct: 124 SHVESQIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPK 165 >gi|77359996|ref|YP_339571.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] gi|109893380|sp|Q3IK85|RL25_PSEHT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76874907|emb|CAI86128.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] Length = 204 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 2/174 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R++ G G++R LR+ ++PAI+YG + I L KD+ K S+ F Sbjct: 1 MSNKTYVYNAELREQTGTGASRRLRREDKVPAIVYGANKEATSITLDHKDVIKAQESEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL+IG E V I KD Q P + H DF ++ + VP+ F+ E+ Sbjct: 61 YTQILTLNIGGESVETILKDIQRHPFKPKVTHLDFQRIDANQKLHTIVPIHFVGEDVVE- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 K G + E+ + C IPD +TVD++ L GDS+H+ D+ LP SS+ Sbjct: 120 -KLGTTVVRQLTEIEISCFPKAIPDFVTVDVSKLVAGDSLHISDVALPAGVSSI 172 >gi|308050540|ref|YP_003914106.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307632730|gb|ADN77032.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 210 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 5/189 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R ++G G++R LR+ ++PA++YG P I L +++ + F + IL L Sbjct: 6 FDAEVRTEIGTGASRRLRRAERLPAVLYGADEAPVAITLDHNKVNQAQELEAFYSQILIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V I K Q P L+H DF +V G +T VP+ FINE S G++ GG + Sbjct: 66 NIDGKKVEAIVKAMQRHPYKPKLLHIDFQRVKRGEAMTATVPLHFINEEDSAGVRAGGTV 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SSMSQLNITIA 182 + +EV++ C ++P++I VD +L G+++H+ D++ P+ + S ++++ Sbjct: 126 MHLVNEVTIRCLPQDLPENIEVDTLNLNTGETLHLSDLKTPKGVEFPNLEAGSDNDLSVV 185 Query: 183 TIVAPISGS 191 +I P GS Sbjct: 186 SIQPPKGGS 194 >gi|77164043|ref|YP_342568.1| ribosomal protein L25 [Nitrosococcus oceani ATCC 19707] gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] gi|109893372|sp|Q3JDQ8|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707] gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] Length = 214 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 100/164 (60%), Gaps = 2/164 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R + GKG++R LR+ G++PA++YG +P + + + L F + ILT Sbjct: 6 ELHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHILT 65 Query: 67 LDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 + + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG+KQ G Sbjct: 66 IHANGKAERVVLKALQRDPVNPNKVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPGVKQEG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G + + +++ + C A ++P+ I VDL DL +G+++H+ D++LP Sbjct: 126 GTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLP 169 >gi|269125253|ref|YP_003298623.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] gi|268310211|gb|ACY96585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] Length = 200 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 7/164 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG+AR R+ G++PA++YG+ + P+ I L D+ L + N + + Sbjct: 3 EVRIAAEPRTEFGKGAARRTRRAGKVPAVLYGHGTPPQHITLPGHDLMLALKTPNVLLRL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L G+EL +PKD Q DP+ L H D L V G VTV VPV + + G Sbjct: 63 EGLPGGEEL--ALPKDVQRDPIKGFLEHVDLLLVKRGEKVTVEVPVVATGD-----VVAG 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G+L +V++ A +IP+++ VD++ L++GDS+ +D++LP Sbjct: 116 GRLEQPVIQVAVEAEATHIPETVEVDVSGLQVGDSVLAKDLKLP 159 >gi|319787942|ref|YP_004147417.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] gi|317466454|gb|ADV28186.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] Length = 207 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 95/159 (59%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ GKG++R LR++G++PAI+YG P I L + + ++ F ++IL L + + Sbjct: 11 REDEGKGASRRLRRDGKVPAIVYGGELAPVSIQLDHEKLWLAQQNEWFYSSILDLSLNGD 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P ++H DF +VS+ + VP+RF+NE KSP K G V+ H Sbjct: 71 VQKVLLRDMQRHPYKQQIMHLDFQRVSDDEVLRAAVPLRFVNEAKSPAGKTAGV--VIMH 128 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV++ C ++P++I VDL+DL +G +H+ ++LP Sbjct: 129 ELTEVNVACLPKDLPEAIEVDLSDLAVGGVVHLSGLKLP 167 >gi|77460975|ref|YP_350482.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf0-1] gi|109893381|sp|Q3K6W3|RL25_PSEPF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77384978|gb|ABA76491.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1] Length = 200 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 102/163 (62%), Gaps = 3/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + ++ Sbjct: 6 LNAELRSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHVIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +VI K Q P ++HADF++V G +T VPV FINE + +K+GG+ Sbjct: 66 LNVGGTKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINE--AAPVKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ V E+ + C ++P+ I VDL + +IG +H+ DI+ P+ Sbjct: 124 ISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDIKAPK 166 >gi|92113647|ref|YP_573575.1| 50S ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] gi|122420093|sp|Q1QXD2|RL25_CHRSD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91796737|gb|ABE58876.1| LSU ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] Length = 215 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 99/167 (59%), Gaps = 2/167 (1%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LSA +R +GKG++R LR+ N ++ AIIYG P+PI L K + + F ++++ Sbjct: 6 LSAEVRHDLGKGASRRLRRENKKVAAIIYGGSKTPQPITLEKSAFYKAIEDEAFFSSVIN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +D+ + VI +D Q P ++ HADF++V +T++VP+ E G+K + G Sbjct: 66 IDLEGQSEQVIIRDIQRHPYKALVTHADFMRVDATHEITMNVPLHINGEEACKGVKDEDG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L+V+ ++V + C +P+ + VD+ +L +G+++H+ D+ LPE S Sbjct: 126 VLHVLANDVEISCLPGKLPEYLEVDVTNLGLGETLHLSDLPLPEGVS 172 >gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus watsonii C-113] gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus watsonii C-113] Length = 215 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 100/164 (60%), Gaps = 2/164 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R + GKG++R LR+ G++PA++YG +P + + + L F + ILT Sbjct: 6 ELHADVRAEQGKGASRRLRRAGKVPAVLYGAAKEPISLIFDHNLLFRHLSHDAFYSHILT 65 Query: 67 LDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 + + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG+KQ G Sbjct: 66 IHANGKAEKVVLKALQRDPVNPNKVLHLDLQRVSAAQKLTIKVPLHFIGDETAPGVKQEG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G + + ++V + C A ++P+ I VDL +L +G+++H+ D++LP Sbjct: 126 GTVARLLNDVEVSCLAKDLPEYIEVDLANLGVGETVHLSDLKLP 169 >gi|330502027|ref|YP_004378896.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] gi|328916313|gb|AEB57144.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] Length = 204 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ + Sbjct: 4 EFALNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L+LD+ +V+ K Q P ++HADF +V G +T HVP+ FINE S G+KQ Sbjct: 64 VLSLDVAGTKENVLIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEASSVGVKQ 123 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG++ +EV + C ++P+ I VD+ + + ++H+ DI+LP+ Sbjct: 124 GGGEVLHALNEVEVSCLPKDLPEFIEVDMAKVAVDQTVHLSDIKLPK 170 >gi|213967230|ref|ZP_03395379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] gi|301381034|ref|ZP_07229452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato Max13] gi|302060384|ref|ZP_07251925.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato K40] gi|302134874|ref|ZP_07260864.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928072|gb|EEB61618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] Length = 203 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 113/184 (61%), Gaps = 6/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + I+ Sbjct: 6 LNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMPAKEVAKLLENEASYSHIIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +VI K Q P ++HADF++V G +T VPV FI E ++P IK+GG+ Sbjct: 66 LNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGE-EAP-IKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN---ITIAT 183 ++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + + IA Sbjct: 124 VSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGNDLAIAN 183 Query: 184 IVAP 187 + AP Sbjct: 184 VHAP 187 >gi|88800290|ref|ZP_01115857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] gi|88777005|gb|EAR08213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] Length = 208 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 104/174 (59%), Gaps = 5/174 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKP--IALSAKDISKRLYSKNFMTTI 64 +L+AV+R++ GKG++R LR+ ++PA+IYG + KP + L +++ K + ++ F + + Sbjct: 6 ELNAVLREEHGKGASRRLRREKKVPAVIYGGAKNRKPQSLTLELRELVKAMENEAFFSHV 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT++IG + I D Q P +D +H D +V++ + V VP+ F+ E K K G Sbjct: 66 LTINIGDKSEQAILMDVQRHPATDFPMHIDLERVTKSTVVHKKVPIHFVGEEKVE--KSG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 K +E+ + C ++P+ I VD+ L++G +H+ +++LP K S+ +LN Sbjct: 124 AKALHAANELEITCKVGDLPEFIEVDVAALEVGAVLHLSELKLP-KGVSLVELN 176 >gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus metallidurans CH34] gi|166223709|sp|Q1LRQ2|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus metallidurans CH34] Length = 203 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-G 125 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G G Sbjct: 62 LEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGHG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIAT 183 ++ + +++ + C ++P+ I VDL ++ +IH+ D++LP+ ++++ N IA+ Sbjct: 122 IVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIAS 181 Query: 184 IVAP 187 I P Sbjct: 182 ITLP 185 >gi|254525296|ref|ZP_05137351.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] gi|219722887|gb|EED41412.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] Length = 205 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 5/169 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F + Sbjct: 3 KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYAS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ FINE+ SP K Sbjct: 63 ILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPAGKA 122 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VV H EV++ C ++P+SI VDL DL GD +++ +I+LP+ Sbjct: 123 ADV--VVTHELKEVTISCLPKDLPESIEVDLADLAAGDVVYLSNIKLPK 169 >gi|262197679|ref|YP_003268888.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] gi|262081026|gb|ACY16995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] Length = 206 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+ R+ GK AR LR G++P I YG+ + P + + L T++ Sbjct: 5 KLTVKRRNITGKSMARKLRTQGRLPGICYGSGVEQPIMLDFDGRAFRASLDPTKRQNTVI 64 Query: 66 TLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + + V+ KDYQ+DP+ L H DF+ V S VT VP+ F KS G Sbjct: 65 DLTVEDDAGAGQSFPVMVKDYQIDPIRRELTHVDFITVDTSSEVTAEVPLEFTG--KSKG 122 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GG L+VV HE+ + C +IP I +D++DL D IH+ D++LPE + + +T Sbjct: 123 VELGGTLHVVRHELEVRCKPADIPSKIVIDISDLDTNDVIHVRDLKLPEGVFASTAEQLT 182 Query: 181 IATIV 185 I T V Sbjct: 183 IITCV 187 >gi|329119316|ref|ZP_08248003.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] gi|327464663|gb|EGF10961.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] Length = 211 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R+ G G++R LR+ GQ+PA++YG+ + IA+ K + L F T+++ Sbjct: 25 ELQATLREAQGTGASRRLRRAGQVPAVLYGDNQEAVAIAVDHKTVFYALEKSAFHTSLIK 84 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + + VI +D+Q+ P ++H DF V + + +PV +N KS +K Q G Sbjct: 85 LTLDGKTQDVIVRDFQIHPFRQQVVHLDFQAVDLNKPLRLRLPVAVVNAEKSKAVKLQSG 144 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V +L NIP ++ +D ++ GD +H+ DI+ PE SS++ N+ +A Sbjct: 145 RVSLLATTVEVLVDPKNIPSALELDCAEVVAGDILHLSDIKYPEGVSSVALKRGSNLAVA 204 Query: 183 TI 184 T+ Sbjct: 205 TV 206 >gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] gi|68053083|sp|Q60A15|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] Length = 202 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 5/185 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R ++GKG++R LR G++PA++YG +P + L + K L ++ + +LT+ Sbjct: 7 FEAELRHQLGKGASRRLRHAGKVPAVLYGGGGEPVSLLLDHHKVVKNLENEATYSHVLTI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + I K Q P +++H DF +VS + VHVP+ FIN+ S G+K+GG + Sbjct: 67 RFDGREENAILKAVQRHPAKPVVMHLDFQRVSAADKIRVHVPLHFINQESSVGVKKGGVV 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQ---LNITIA 182 + +V + C ++P+ I VDL + IG IH+ D++LP + +++Q ++ +A Sbjct: 127 SHGMVDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSDLKLPAGVEIHALAQGVGHDLPVA 186 Query: 183 TIVAP 187 ++ AP Sbjct: 187 SVHAP 191 >gi|28868318|ref|NP_790937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|71153160|sp|Q888C7|RL25_PSESM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28851555|gb|AAO54632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|331018128|gb|EGH98184.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 203 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 113/184 (61%), Gaps = 6/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + I+ Sbjct: 6 LNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASYSHIIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +VI K Q P ++HADF++V G +T VPV FI E ++P IK+GG+ Sbjct: 66 LNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGE-EAP-IKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN---ITIAT 183 ++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + + IA Sbjct: 124 VSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGNDLAIAN 183 Query: 184 IVAP 187 + AP Sbjct: 184 VHAP 187 >gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 210 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 4/184 (2%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L +++ Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVLDMEL 64 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLN 128 + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K +N Sbjct: 65 AGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKIDKCMVN 124 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIATIV 185 V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S++ SQ N + ++V Sbjct: 125 PVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSAVVRGSQQNPVLVSVV 184 Query: 186 APIS 189 P++ Sbjct: 185 TPVA 188 >gi|323388152|gb|ADX60348.1| 50S ribosomal protein L25 noteral stress protein Ctc [Pseudomonas fluorescens] Length = 199 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 103/163 (63%), Gaps = 3/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+I+K L + + I+ Sbjct: 6 LNAELRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEIAKLLENDAAYSHIIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +VI K Q P ++HADF++V G +T VPV F+ E ++P +K+GG+ Sbjct: 66 LNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGE-EAP-VKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ V E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ Sbjct: 124 VSHVIAEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPK 166 >gi|330873313|gb|EGH07462.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967422|gb|EGH67682.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. actinidiae str. M302091] Length = 203 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 113/184 (61%), Gaps = 6/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ + I+ Sbjct: 6 LNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASYSHIIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G +VI K Q P ++HADF++V G +T VPV FI E ++P +K+GG+ Sbjct: 66 LNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGE-EAP-VKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN---ITIAT 183 ++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + + IA Sbjct: 124 VSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGNDLAIAN 183 Query: 184 IVAP 187 + AP Sbjct: 184 VHAP 187 >gi|326796206|ref|YP_004314026.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] gi|326546970|gb|ADZ92190.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] Length = 192 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG++R LRK G +PA+IYG ++ + + ++ K + + F+T+++ + Sbjct: 5 IEAAPRSEEGKGASRRLRKQGLVPAVIYGGETEAQSVTFKNNELVKAVANVAFLTSVVEV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 + V+ K Q P + ++H D L+++E T+ +P+ F+N KS G+K QGG+ Sbjct: 65 SVDGAAQKVLVKSLQRHPSTGDVMHVDLLRIAEDKTIATRIPLEFVNAEKSEGVKAQGGR 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L+V + C ++P S+ VD D ++G H+ D +LPE Sbjct: 125 LSVEAKLAEVRCLPKDLPASLIVDAIDGQLGQIFHLSDAQLPE 167 >gi|330993035|ref|ZP_08316973.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] gi|329759805|gb|EGG76311.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] Length = 205 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 1/166 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL-VHVIPKDYQL 83 R+ G +P +IYG +P IAL + + + L+ + + I + + K VH + ++ QL Sbjct: 24 RRAGLVPGVIYGAGQEPVLIALDPRIVYRELHKSGWRSRIYDISVEKGASVHALLREVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD IH D+ +++ G V V V +RF E SPG+K+GG +N+V H V ++ NI Sbjct: 84 HPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVKRGGVMNIVRHTVDVVVDPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 P+ T DL+ L D++ ED++ E + + N + VAP S Sbjct: 144 PEFFTADLSKLDFHDNVRWEDLKGTENVTPVQHDNNFVIANVAPPS 189 >gi|328882994|emb|CCA56233.1| LSU ribosomal protein L25p [Streptomyces venezuelae ATCC 10712] Length = 197 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 9/169 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG+AR +R+N Q+PA++YG+ S+P + L A D++ L + N + Sbjct: 3 EVKLAAAVRTEFGKGAARAIRRNAQVPAVVYGHGSEPAHVTLPAHDLALALRTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+LDI + IPK Q D + L+H D L V G VTV +PV+ E + G Sbjct: 60 LSLDIDGKNELAIPKAVQRDAIKGFLVHVDLLLVKRGEKVTVEIPVQAEGE-----LAAG 114 Query: 125 GK-LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 G L V +S+ A ++P++++V + L+ G S+ +DI LP+ + Sbjct: 115 GNLLEHVLSTLSVEAEATHLPEAVSVSVEGLEAGASVLAKDITLPKGAT 163 >gi|166710809|ref|ZP_02242016.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzicola BLS256] Length = 211 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 5/168 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE+ SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEDASPAGKS 122 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 VV H EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 123 SEV--VVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLP 168 >gi|261365424|ref|ZP_05978307.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] gi|288566085|gb|EFC87645.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] Length = 190 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T ++ Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + E VI +D+Q+ P + H DF V V + VP+ +N S +K QGG Sbjct: 64 LSLNSETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAESSQAVKLQGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP + +D + GD +H+ +I+LPE S+S N+ +A Sbjct: 124 RVSLLNTTVEVVALPANIPAYLDLDCAKVVAGDILHLSNIQLPEGVESVSLKRNENLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] Length = 208 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 94/162 (58%), Gaps = 5/162 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+SA R+K+G +R +R+ G+IPA++YG+ DP +++ D+ + ++ + Sbjct: 9 KISATKREKLGSIESRHIRRAGRIPAVVYGHGQDPAHVSVDEHDLQDLVKNRE---RVFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ ++ + +D Q D ++H D ++++ VT+ VPVR SPG GG Sbjct: 66 IDVDGKVEETMLRDLQWDTFGTQILHVDLIRINASERVTLEVPVRL--RGTSPGATDGGI 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 L H + L C A++IPD I+V +N L+IGD+IH+ DI +P Sbjct: 124 LEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDIEVP 165 >gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] Length = 215 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 104/177 (58%), Gaps = 3/177 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ F + Sbjct: 4 EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEAFYSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-K 122 ILTL + V + +D Q P +H D L+V + +T++VP+ FINE S G+ K Sbjct: 64 ILTLKLDGASVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMNVPLHFINEESSIGVKK 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 QGG++ EV + C ++P+ I VD+ + ++ IH+ D++LP K ++QL + Sbjct: 124 QGGEIQHNYAEVEVSCLPQHLPEFIEVDMANAELETVIHLSDLKLP-KGVELTQLAL 179 >gi|95930456|ref|ZP_01313192.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] gi|95133496|gb|EAT15159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] Length = 207 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 4/184 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L+ +R++VGKG AR R+NG +P ++YG +P + + K + + + + T+ Sbjct: 3 QAELNVALRERVGKGGARSARRNGLVPGVVYGPGIEPCTVNVEPKALQEAISGEAGWNTL 62 Query: 65 LTL--DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LTL D + V + KD Q+D + H DF + ++ VPV + KS G K Sbjct: 63 LTLKGDGPFDGVLAVVKDIQVDAIRRDATHVDFQAIDSNKMLSFMVPVNAVG--KSAGEK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V+ E+ ++C N+P I +D+ L+IGD +H++D+ PE +N T+ Sbjct: 121 AGGNLQVIRKELEVVCLPANVPGHIDIDVEALEIGDVVHIDDVTAPEGVELPHDVNFTVI 180 Query: 183 TIVA 186 T+V Sbjct: 181 TVVG 184 >gi|88810857|ref|ZP_01126114.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] gi|88792487|gb|EAR23597.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] Length = 233 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 1/166 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A +R GK ++R LR+ ++PAI+YG D +AL + + + + F + I Sbjct: 4 ELKLDAAVRTDQGKSASRRLRRAKKLPAILYGAKKDAIALALDEEQVMGLMRDETFFSQI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILI-HADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + ++IG I KD Q PV +++ H D +V+ G + VP+ FINE K+ G+KQ Sbjct: 64 IDVNIGDTTERAILKDLQRHPVKPLVVLHMDLQRVTAGQKLRQRVPLHFINEEKAVGVKQ 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG L+ +V + C ++P I VD+ L + ++ H+ D++LP+ Sbjct: 124 GGTLHHDLLDVEIECLPRHLPAYIEVDIATLGLDEAYHLSDLKLPK 169 >gi|58583225|ref|YP_202241.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625061|ref|YP_452433.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|68053027|sp|Q5GWR5|RL25_XANOR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893406|sp|Q2NZW8|RL25_XANOM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58427819|gb|AAW76856.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369001|dbj|BAE70159.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 211 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 5/168 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDIQRHPFKQLIMHIDFQRVSANQKLSAAVPLHFINEEASPAGKS 122 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 VV H EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 123 SEV--VVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLP 168 >gi|289663466|ref|ZP_06485047.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667603|ref|ZP_06488678.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 210 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEAASPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I VDL L++GD IH+ +I+LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEVDLGALEVGDVIHLSEIKLP 168 >gi|85713257|ref|ZP_01044282.1| Ribosomal protein L25 [Idiomarina baltica OS145] gi|85692926|gb|EAQ30899.1| Ribosomal protein L25 [Idiomarina baltica OS145] Length = 220 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P + L ++ + F Sbjct: 1 MAKLDFNIKATVRTDKGKGASRRLRHADKVPAILYGGKDEPIALELDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILTL+I + I KD Q P L H DF +V +G + HVP+ F+NE + G Sbjct: 61 YSHILTLEIDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTHVPLHFLNEETAKG 120 Query: 121 IKQGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +K G VV H +V ++ ++P+ + VD+ +L +GD+IH+ D+ LPE Sbjct: 121 VKDEG--GVVVHHVNDVEIMVLPKDLPEYLEVDIANLSVGDTIHLTDLNLPE 170 >gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum] Length = 191 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA--KDISKRLYSKNFM 61 + KL +RD GKG AR LR++G +PA++YG+ K +LSA KD+ K + Sbjct: 2 EHSKLKVSVRDSTGKGVARTLRRSGHVPAVVYGS---GKAQSLSALLKDVEKAIQGHAGR 58 Query: 62 TTILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + L+I + +D Q DP++ ++H DFL+VSE + V VPV I + Sbjct: 59 NGLFDLEISGGNSSRTALTLVRDIQRDPITGKILHVDFLEVSEKARVKNRVPVEVIGSSP 118 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K+GG L+VV E+ + C + +PD I VD + L I ++H+ D+ LP + + Sbjct: 119 E-GVKKGGILDVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPGVTVLDDP 177 Query: 178 NITIATIVAP 187 N I ++ P Sbjct: 178 NTVILHVIPP 187 >gi|312958844|ref|ZP_07773363.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] gi|311286614|gb|EFQ65176.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] Length = 199 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 105/163 (64%), Gaps = 3/163 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + ++ Sbjct: 6 LNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHVIE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G + +VI K Q P ++HADF++V G +T VPV F+ E ++P +K+GG+ Sbjct: 66 LNVGGKKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGE-EAP-VKKGGE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ V +E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ Sbjct: 124 ISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPK 166 >gi|254495954|ref|ZP_05108862.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] gi|254354832|gb|EET13459.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] Length = 220 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 94/163 (57%), Gaps = 1/163 (0%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R +GKG++R LR+ ++PA+IYG P I + K L +++ +++ Sbjct: 6 LEAESRTDMGKGASRRLRRLENKVPAVIYGGEKKPMSIHFQHNKVIKALETESIYSSVFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + I ++ HVI K Q P +++H D +VS+ + VP+ F+NE ++PGIK GG Sbjct: 66 ITIDGKVEHVILKALQRHPYKPLVMHMDLQRVSKKDVLVKLVPLHFVNEQQAPGIKAGGM 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +N ++ + C A ++P+ I VD+ + + D IH+ +++LP+ Sbjct: 126 INHTMTQIEIRCQAKDLPEFIEVDMAKVALDDVIHLSNLKLPK 168 >gi|56476200|ref|YP_157789.1| 50S ribosomal protein L25/general stress protein Ctc [Aromatoleum aromaticum EbN1] gi|68053040|sp|Q5P723|RL25_AZOSE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56312243|emb|CAI06888.1| 50S Ribosomal protein L25 [Aromatoleum aromaticum EbN1] Length = 201 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A R + G G++R LR+ GQIP IIYG +D + I + ++ L + F ++L + Sbjct: 5 FKATQRVEQGTGASRRLRRAGQIPGIIYGADTDAQAITVDHNELYHLLKKETFHASVLMI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ V+ +D Q P ++H DF ++ G + + VP+ FIN + +P +K GG + Sbjct: 65 ELEGAKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFINNDTNPAVKLGGCM 124 Query: 128 NVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + H E+ + C N+P+ I VDL L+ G SIH+ ++LPE ++ Sbjct: 125 --ISHTMTELDIACLPANLPEFIEVDLQSLEAGQSIHVSQLKLPEGVEAVHH 174 >gi|158522828|ref|YP_001530698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] gi|226736308|sp|A8ZXZ4|RL25_DESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158511654|gb|ABW68621.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] Length = 217 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 9/190 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ KE ++ R G + + LR+ G +PAI+YG+ +DP P+A+ D + RL K+ Sbjct: 1 MELKELQVKT--RQMAGGPTPKALRRQGFVPAIVYGHKNDPLPLAVD--DHTFRLLLKDA 56 Query: 61 MTTIL---TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 L +D G V+ K+ Q PVS LIHADF +V +T +VPV K Sbjct: 57 GQQALLSLVIDDGAASKTVMLKELQQHPVSLKLIHADFHEVDLTKKITTYVPVATTGVCK 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G K+GG L ++ E+ + C IP+SI +D++ L IGDS+H+ DI PE + ++ Sbjct: 117 --GEKEGGVLQLIRRELEVRCLPGLIPESIAIDISALDIGDSVHVADIEAPEGVELVHEV 174 Query: 178 NITIATIVAP 187 N T+ + AP Sbjct: 175 NFTVIAVAAP 184 >gi|332993707|gb|AEF03762.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas sp. SN2] Length = 210 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 94/168 (55%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +GKG++R LR+ ++P IIYG P I L ++ + F + +LTL Sbjct: 8 LDATVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNAADFEAFYSHVLTL 67 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + V V+ KD Q ++H DF +V G + +VP+ FINE+KS IK GG Sbjct: 68 NVDGKAVEVLVKDMQRHAFKPRILHVDFQRVIAGQELHTNVPLHFINEDKSAAIKAGGIA 127 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +E+ + C ++P+ I VD+ ++++ ++H+ D+ LP +S+ Sbjct: 128 EHHVNEIEITCLPKDLPEFIEVDIANVEMDSTLHLSDLTLPAGITSVE 175 >gi|289523178|ref|ZP_06440032.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503721|gb|EFD24885.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 219 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 6/176 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTL---D 68 R+ +GK ++ LRK G +PA+ YG + + P+ +S +I ++S ++ T + + D Sbjct: 13 RENLGKNRSKRLRKEGYLPAVFYGPDYKEAVPVKVSVDEILPHIHSSHWKTLMFNVIFPD 72 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 KE+ + +DYQ DP+S ++H DF Q+ +G V V VP+ IN G+K+GG L Sbjct: 73 GKKEMAMI--RDYQRDPISRQVLHIDFYQLVKGHRVLVAVPIVLINRESCLGVKKGGVLI 130 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 HE+ + +PD I VD+ L +GDS+ + DI LPE L T+ I Sbjct: 131 QSLHELEMEVLPTEMPDEIHVDIAGLDVGDSLRISDINLPESALVSVDLEDTVVQI 186 >gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sulfurreducens PCA] gi|71153144|sp|Q74FE7|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39982532|gb|AAR33992.1| ribosoma protein L25 [Geobacter sulfurreducens PCA] gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400] Length = 194 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 100/170 (58%), Gaps = 6/170 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+QK +S +R+K GKG AR LR +P ++YG +P + ++AKD++ + + Sbjct: 1 MEQK--TMSIELREKNGKGVARKLRAQDVVPGVVYGKGIEPVSVKVAAKDLAATIAGEGG 58 Query: 61 MTTILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + +++TL G L VI D Q +P+ ++H DF ++S V VHVP+ + + Sbjct: 59 LNSLITLSGGGSLNGNIVIVADMQRNPLKGDILHVDFHRISLDEKVKVHVPLVMVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G+K+GG L+VV + + + C IP++I VD+ +L IG SIH+ ++ LP Sbjct: 117 AGVKEGGMLDVVTYSLDVECLPTAIPEAINVDVTNLAIGHSIHVSELVLP 166 >gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc [Halorhodospira halophila SL1] gi|166223688|sp|A1WVQ2|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1] Length = 209 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 100/171 (58%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R + G+G+ R LR+ ++P ++YG +P+P+AL + + L + F +TI Sbjct: 4 EMRLDAHPRTETGRGAMRRLRRARRVPGVVYGAGKEPQPVALENDQLYRLLEEEAFFSTI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + +G E I KD Q P ++ H D +V E +TVHVP+ E +SPG+K+G Sbjct: 64 LKVQMGSETEQAIVKDLQRHPFKPLVQHIDLQRVREDQPITVHVPLHVHGEEQSPGVKKG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G L+ ++ ++C ++P I VD++ LK+G ++H+ ++ LPE S + Sbjct: 124 GVLHHDLLDLEVVCLPKDLPPFIDVDVSSLKVGQAVHISELTLPEGVQSAA 174 >gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] Length = 216 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 105/190 (55%), Gaps = 11/190 (5%) Query: 7 KLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A +R GKG++R LR+ G++P ++YG + I+L KD+ K + + F ++L Sbjct: 6 EVQAQVRVDEGKGASRRLRRLEGKVPGVVYGGEAAAISISLIRKDLEKMMEQETFYASVL 65 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + I KD Q P +H DFL+V + V+VP+ F NE+ G+K GG Sbjct: 66 NVNVDGSVETAILKDVQRHPAKGFPMHVDFLRVQADKAIKVNVPLHFTNEDVCHGVKMGG 125 Query: 126 KLNVVCHEVS---LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 + V H+ + + C +IPD I VD++ +++G +H+ D+ LP S + Sbjct: 126 GM--VQHQATDMEVQCLPGDIPDYIEVDMSAVELGQIVHLSDVTLPAGVESTALALGDDH 183 Query: 178 NITIATIVAP 187 ++ IA+++AP Sbjct: 184 DLAIASVIAP 193 >gi|116626137|ref|YP_828293.1| 50S ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] gi|116229299|gb|ABJ88008.1| LSU ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] Length = 227 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ + A +R+ GK AR R G IPA++YG +P +A+S +DI K + S + T Sbjct: 3 KDITVPAEIRNSRGKNEARRTRMAGNIPAVVYGAYQEPVSVAVSPRDIVKIIRSNTGLNT 62 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I TL I G E V+ D Q+DP+ L+HADF +V + V VPV E + G+K Sbjct: 63 IFTLAIAGGETTPVMIVDRQVDPIKSTLLHADFKRVDLTKRIRVSVPV--FTEGEPAGVK 120 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 QGG L ++ + + C ++IP+ V++++L IG S D+ L +S I Sbjct: 121 VQGGLLEIISRAIEIECLPDDIPEKFVVNVSELMIGQSKRGSDVALSGSMKLVSDPQTVI 180 Query: 182 ATIVA 186 A IVA Sbjct: 181 AHIVA 185 >gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium cellulosum 'So ce 56'] gi|189042374|sp|A9GXJ8|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum 'So ce 56'] Length = 229 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A R+ GK ++ LR+ GQIPAI YG P+ +A+S K + + L S + +++ Sbjct: 5 KLNATRREDSGKSASSRLRRAGQIPAIAYGRELAPQSVAISPKALLQVLGSDHGKNSVVE 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L I + + V+ +DY P+S L+HADF+QV V V +P R + + K G+ GG Sbjct: 65 LAIENGQTLTVMVRDYDYHPISRELVHADFIQVKLDQPVDVQIPFRCVGKPK--GVVTGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + + C IP I +D+ +L +GDS ++LPE ++ + TIA + Sbjct: 123 VLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKASGLKLPEGVKTLLADDQTIAVVN 182 Query: 186 AP 187 AP Sbjct: 183 AP 184 >gi|225025469|ref|ZP_03714661.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] gi|224941753|gb|EEG22962.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] Length = 190 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 4/184 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A +R++ G G++R LR+ G++PA++YG SD +++ K + L + F T I+ Sbjct: 4 KIEAQVREEQGTGASRRLRREGRVPAVVYGAGSDATAVSVDHKTVFFALQKEEFHTAIIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + + VI +D+Q+ PV + H DF V G + + +P+ +N KS +K Q Sbjct: 64 LALNGKEHDVIVRDFQMHPVRREVRHIDFQIVEAGKPIKIRLPLHVVNAEKSQAVKLQNS 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 ++ ++ V +L +IP + +D + GD +H+ DI+ PE S S N+ +A Sbjct: 124 RVALLSTSVEVLLDPKHIPSELVLDCEKVVAGDVLHLSDIQYPEGVESTSLRRGANLAVA 183 Query: 183 TIVA 186 T+ A Sbjct: 184 TVTA 187 >gi|302342165|ref|YP_003806694.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] gi|301638778|gb|ADK84100.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] Length = 202 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ L+A R+ GKG+AR +R G+IPA++Y + + + A+++ + L + Sbjct: 2 KQIPLAAARRETTGKGAARQMRAAGKIPAVVYSAGKPAENLMVEAREVDRLLRQSGGGSA 61 Query: 64 ILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L+L + E + + ++ Q D + +IH DF Q+ ++V P+ + E K G Sbjct: 62 FLSLSVADEPARLAMLQEMQFDYLGKKVIHIDFHQIKADEEISVEAPIELVGEAK--GAA 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG +N + V L +IPD++ VD++ L +GD+IH D+ LP+ + +S+ ++ + Sbjct: 120 EGGLINQNLYSVLLRGRIADIPDAVVVDISGLDLGDNIHSTDLTLPQNVAMVSEESVLVV 179 Query: 183 TIVAPISGS 191 VAP +G Sbjct: 180 ACVAPNTGG 188 >gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio japonicus Ueda107] gi|226736293|sp|B3PJN6|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107] Length = 203 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 2/168 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ KL A R+ +GKG++R LR+ Q+PAIIYG P +++S ++ K L + F + Sbjct: 3 EDFKLDATARNDLGKGASRRLRRLADQVPAIIYGGSKAPVNVSVSHNELLKHLQHEAFFS 62 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+I VI KD Q P ++H DFL+V + + + VP+ FINE S G+K Sbjct: 63 HVIDLNIDGTSESVILKDVQRHPSKAQVLHLDFLRVDKNTKLHKQVPLHFINEATSVGVK 122 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 QGGK+ ++ + C ++P+ I VDL ++ G +H+ D++LP+ Sbjct: 123 TQGGKVVHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHISDLKLPK 170 >gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] Length = 193 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 94/162 (58%), Gaps = 2/162 (1%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P I++G ++P PI + ++ KRL + F +T+ L + G+E V VI +D Q D V D Sbjct: 2 VPGIVFGGDAEPLPINIPFNELFKRLKAGRFKSTLFNLKVEGQEDVRVICRDVQRDVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H D +++ + + + +P+ F NE + P IK+GG L V +E+ L+ A +IPD+I Sbjct: 62 LPTHLDLMRLRRTTKINLFIPLDFTNEEECPAIKKGGVLTTVRNEIELIVTAGDIPDAIE 121 Query: 149 VDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL ++ IGD+I + I LP+ + + I + AP S Sbjct: 122 VDLTKIENIGDTITISMIDLPKGAKPTIERDFVICNVSAPSS 163 >gi|21241720|ref|NP_641302.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas axonopodis pv. citri str. 306] gi|78046537|ref|YP_362712.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294666031|ref|ZP_06731293.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928009|ref|ZP_08189227.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] gi|71153676|sp|Q8PNT9|RL25_XANAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893405|sp|Q3BX01|RL25_XANC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21107089|gb|AAM35838.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str. 306] gi|78034967|emb|CAJ22612.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292604223|gb|EFF47612.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541623|gb|EGD13147.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] Length = 211 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLP 168 >gi|325921463|ref|ZP_08183318.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] gi|325548010|gb|EGD19009.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] Length = 211 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RANEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P ++IH DF +VS ++ VP+ F+NE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIIHIDFQRVSANEKLSAAVPLHFVNEATSPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I VDL L++G+ IH+ +I LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEITLP 168 >gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa Temecula1] gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M23] gi|71153679|sp|Q87A23|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694604|sp|B2IA79|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1] gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella fastidiosa M23] gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa subsp. fastidiosa GB514] Length = 207 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 6/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F ++IL Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILD 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP K GG Sbjct: 65 LNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKVGG 124 Query: 126 KLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ H EV + C ++P+ I VDL+ L +G IH+ DI P Sbjct: 125 V--VITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFP 168 >gi|325914244|ref|ZP_08176594.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] gi|325539499|gb|EGD11145.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] Length = 211 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ F+NE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFVNEASSPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLP 168 >gi|301060863|ref|ZP_07201672.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] gi|300445037|gb|EFK08993.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] Length = 229 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 109/193 (56%), Gaps = 11/193 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A +R + GKG+AR LR+N QIPAI YG DP + + + + + I Sbjct: 3 QLALAAHIRTETGKGAARRLRQNNQIPAIFYGPGVDPIMLRIEYSRLLELEKAGKGENAI 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP- 119 L L I G+ + V+ K+ +DP+ + +HADF ++S +T+ +PV +N +P Sbjct: 63 LDLKIHTDQGETIKKVMVKELTVDPLKNTFVHADFYEISNDREITLPIPVHLLN---TPI 119 Query: 120 GI-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ ++GG L + EV++ C + + + + +D+ DL +GD++ + D+ LPE M + N Sbjct: 120 GVAEEGGILQQIRREVTITCFPDKLIEFLEIDIADLNVGDTVRIGDLELPEGIQIMEEPN 179 Query: 179 ITIATIVAPISGS 191 +T+A V I GS Sbjct: 180 LTVA--VVNIKGS 190 >gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp. MZ1T] gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp. MZ1T] Length = 200 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + A RD G G++R LR+ G+IP I+YG + +P+++ ++ L + F ++ Sbjct: 2 QIEFKATKRDAQGTGASRRLRRAGRIPGILYGGAGETQPVSMDHNELYHLLRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++++ + + +D Q P ++H DF +++ G + + VP+ F+ + +P +K G Sbjct: 62 LSIEVDGAKQNAVLRDVQWHPFKQQVLHLDFQRIAAGEKMHLKVPLHFVGADVAPAVKLG 121 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G ++ +E+ + C ++P+ I VDL+ L+ G S+H+ I+LP Sbjct: 122 GCMISHTINELDVQCLPTDLPEFIEVDLSALEAGQSVHVSQIKLP 166 >gi|71899973|ref|ZP_00682119.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] Length = 207 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 6/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R GKG++R LR G IPAIIYG P I L+ + I + F ++IL Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNDWFYSSILD 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP K GG Sbjct: 65 LNVDGAGDEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPADKAGG 124 Query: 126 KLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ H EV + C ++P+ I VDL+ L +G IH+ DI LP Sbjct: 125 V--VITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITLP 168 >gi|297568582|ref|YP_003689926.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] gi|296924497|gb|ADH85307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] Length = 189 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 97/168 (57%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + A RD+ GKG+AR LR+ G+ PA++YG +P+ ++L +K L+S + ++ Sbjct: 3 QVDVKAAKRDQRGKGAARSLRRAGRTPAVLYGPQMEPQALSLDTHTFTKALFSVHRRNSV 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ G+++ HV+ ++ Q DP+ D ++HADF +S + VP+R+ K+ G Sbjct: 63 INLEVSDDGGEKIHHVVTREIQTDPILDQVLHADFYVISLDEPLVFQVPLRY--RGKAKG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + GG L H+VSL A +IPD I VD++ L + ++ LP Sbjct: 121 VDMGGDLVTSLHKVSLKGKALDIPDDIEVDVSGLGPNSELTCGELSLP 168 >gi|218781214|ref|YP_002432532.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfatibacillum alkenivorans AK-01] gi|226736306|sp|B8FLB8|RL25_DESAA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218762598|gb|ACL05064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfatibacillum alkenivorans AK-01] Length = 218 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 4/190 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +L A R G G AR LR+ G IPA++YG S+P +++S KD+S L Sbjct: 2 KTHELKASPRTTRGNGPARALRREGFIPAVLYGPDSEPITLSVSHKDLSDILQGVGSSQV 61 Query: 64 ILTLDI-GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L+I G + + K+ Q + VS +HADF ++S + V VPV + E KS G+ Sbjct: 62 MFNLNIEGADAPRKAMIKELQTNVVSQRYLHADFYEISMDRKLHVMVPV--VVEGKSKGM 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG L V+ E+ ++C +IP+ +D+ +L IG+++H+ D+ + + T+ Sbjct: 120 EEGGLLQVIRRELEVICLPGDIPEEFVIDVTELGIGEAVHLSDVPKGDAVEFPESADFTV 179 Query: 182 ATIVAPISGS 191 T+VAP + + Sbjct: 180 VTVVAPTAAA 189 >gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] Length = 200 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 6/164 (3%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDI 89 +PA++YG +P I L KD K L ++ F T I+ +D+ VI KD Q P Sbjct: 1 MPAVVYGTDKEPTSITLIRKDFEKMLEAETFYTAIIDIDVEGTHESVILKDLQRHPAKGF 60 Query: 90 LIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDSIT 148 +HADFL+++ + + V +P+ F+NE+ G+K GG + ++ + C NIP+ I Sbjct: 61 PMHADFLRINADTELKVAIPIHFMNEDTCVGVKVNGGVIQRQETDIEVSCLPRNIPEYIE 120 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNITIATIVAP 187 VD+ L IGDSIH+ D+ LPE S + ++ I ++VAP Sbjct: 121 VDMAALDIGDSIHLTDVTLPEGVVSTALEFGELTDLMIVSVVAP 164 >gi|238020516|ref|ZP_04600942.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] gi|237867496|gb|EEP68502.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] Length = 190 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 98/170 (57%), Gaps = 2/170 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A +R+ G G++R LRK G +PA++YG + + + IA+ K + L ++F T +L Sbjct: 4 QIQATVRETQGTGASRRLRKEGLVPAVVYG-VGEAQAIAVDHKQMFYALEKESFFTQLLK 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I + VI +DYQ+ PV + H DF V+ + + +PV +N KS +K Q G Sbjct: 63 LNINGKEQDVIVRDYQMHPVKRQVQHIDFQAVNVNEPLRMRIPVHVVNAEKSKAVKLQSG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 ++ ++ V ++ NIP +I +D +++ GD +H+ D+ PE S++ Sbjct: 123 RVALLTTVVDVIVDPKNIPAAIELDCENVEAGDILHLSDLSFPEGVQSVA 172 >gi|187735963|ref|YP_001878075.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] gi|226736273|sp|B2UL21|RL25_AKKM8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187426015|gb|ACD05294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] Length = 201 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 103/175 (58%), Gaps = 3/175 (1%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 G G+ + LR G +P ++YG D I + A++ ++ L S ++ LDI ++V V Sbjct: 15 GSGNLKQLRSQGLVPGVVYGPGFDNVNIQVDAREFARMLASAVSEHILVALDINGKIVKV 74 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + K+ Q +P+++ +H DF V++ T +H V I E S G+ GG L+ HE+++ Sbjct: 75 LLKEVQHNPITNACLHVDFQAVTD--TTVIHSIVPVILEGDSAGVALGGVLDQTIHELAI 132 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP-ISG 190 +C ++P++IT D++ LK+G+S+ + D++LP ++ ++ +A + AP +SG Sbjct: 133 ICQVKDLPEAITADISGLKLGESLRITDLKLPSGVTTELAGDVIVAIVEAPRVSG 187 >gi|148245095|ref|YP_001219789.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] gi|166223730|sp|A5CVE7|RL25_VESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146326922|dbj|BAF62065.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] Length = 225 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 92/162 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ R+ GKG+ R LR+N +IPAI+YG P I L +I+ L ++ T++L L Sbjct: 5 INALTRNYQGKGANRRLRRNNKIPAIVYGTGKPPSKITLDIFEITHLLKNEETYTSVLNL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + K VI K+ Q P + + H DFL+++ ++ +P++F E + ++ G L Sbjct: 65 IVNKNKEAVIIKNLQRHPAKNSITHIDFLRINLNQSIITSIPIQFNGEEDNKAMRLGAVL 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 N + + C N+P SI VD++ L IG+ I++ DI +P+ Sbjct: 125 NQFMTAIEISCLPTNLPHSINVDISHLTIGEHINLTDINIPK 166 >gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] Length = 220 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 4/184 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++SA R G G++R LRK ++P I+YG + I L + L ++ F +IL+ Sbjct: 4 EISATTRKAQGTGASRRLRKTNRVPGIVYG-AGEATMIELDHNTLYYALRNEAFHASILS 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D+Q+ P + H DF +V V + VP+ F+N + +PG+K GG Sbjct: 63 LELDGKKQSVLLRDFQMHPFRQQVQHIDFQRVDAKKKVHMKVPLHFLNADVAPGVKVGGG 122 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIAT 183 ++ V +E+ ++C ++P +I VDL+ L++G S+H+ D++LP+ + + + +AT Sbjct: 123 IISHVLNELEIVCLPADLPAAIEVDLSGLELGHSVHVSDVKLPKGVELAGHHHASDAVAT 182 Query: 184 IVAP 187 + P Sbjct: 183 VQVP 186 >gi|332971129|gb|EGK10094.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella kingae ATCC 23330] Length = 188 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR N Q+PA++YG + + K I + K++ L + F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHNAQVPAVVYG-LGETKAITVDHKEMYFALQKETFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 I + +VI +DYQ+ PV + H DF + V + +PV +N S +K Q G+ Sbjct: 63 SIDGKEQNVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRIKLPVHIVNAEISHAVKLQSGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ DI+ PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCEKVVAGDILHLSDIKYPEGVQSIALKRNSNLAVAT 182 Query: 184 I 184 + Sbjct: 183 V 183 >gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax borkumensis SK2] gi|123050701|sp|Q0VS83|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2] Length = 214 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 3/177 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ F + Sbjct: 4 EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEAFYSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-K 122 ILTL + V + +D Q P +H D L+V + +T+ VP+ F NE S G+ K Sbjct: 64 ILTLKLDGADVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMSVPLHFTNEESSIGVKK 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 QGG++ EV + C ++P+ I VD+ + ++ +H+ D++LP K ++QL + Sbjct: 124 QGGEIQHNFAEVEVSCLPQHLPEFIEVDMANAELDSVVHLSDLKLP-KGVELTQLAL 179 >gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax ferrireducens T118] gi|109893386|sp|Q21XW2|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118] Length = 223 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R K G G++R LR G+ P I+YG ++P+ I + + L + F +L Sbjct: 2 KFVAFERAKQGTGASRRLRITGRTPGIVYGGGAEPQQIEIDHNALWHALKKEAFHAAVLD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + + SP +K G Sbjct: 62 MELDGKDNKVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLHYSGDENSPAVKTEGC 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + N V E+ +LC ++P+ I VDL+ LK G S+H+ D+ LP+ +++++ N Sbjct: 122 IANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVALPKGVTAVTRGN 174 >gi|294627824|ref|ZP_06706403.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597738|gb|EFF41896.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 211 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGG 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLP 168 >gi|42526848|ref|NP_971946.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema denticola ATCC 35405] gi|71153672|sp|Q73N16|RL25_TREDE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41817163|gb|AAS11857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Treponema denticola ATCC 35405] Length = 211 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM----TT 63 L+A R GK +A +RK G+IPA++Y PI D+ +R + K F +T Sbjct: 6 LNANERSTYGKNAAVKMRKAGRIPAVMYDRHGKSVPI-----DVDEREFMKLFKLVTEST 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+TL+ + V KD+Q D VSD + H DF +V G T+ V +R E G++ Sbjct: 61 IVTLNAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL--EGSPEGVRH 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A Sbjct: 119 GGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVAA 178 Query: 184 I 184 I Sbjct: 179 I 179 >gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71902209|ref|ZP_00684221.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M12] gi|226694605|sp|B0U5Y7|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12] Length = 207 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 6/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F ++IL Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGDQRPVSIQLNHEQIWLAQQNEWFYSSILD 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP K GG Sbjct: 65 LNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKAGG 124 Query: 126 KLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ H EV + C ++P+ I VDL+ L +G IH+ DI P Sbjct: 125 V--VITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFP 168 >gi|332528605|ref|ZP_08404587.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] gi|332041921|gb|EGI78265.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] Length = 218 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 93/170 (54%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R K G G++R LR G+ P I+YG +P I L + L + F ++IL Sbjct: 2 KFVAFERAKQGTGASRRLRHTGRTPGIVYGGTVEPSLIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + E SP IK Sbjct: 62 MELNGKSNQVLLRDVQMHPYKPLVLHIDFQRVDANTKLHMKVPLHYSGEENSPAIKDKSL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +N + E+ + C ++P+ I VDL+ L G S+H++DI LP+ ++++ Sbjct: 122 VNHIVTELEISCLPKDLPEFIAVDLSKLTKGASLHLKDITLPKGVTAVTH 171 >gi|295110890|emb|CBL27640.1| ribosomal protein L25, Ctc-form [Synergistetes bacterium SGP1] Length = 216 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 101/176 (57%), Gaps = 5/176 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNF--MTTILTLDI 69 R++ GKG+ LR+ G P I YG M L +D+ + L + + M +TL Sbjct: 4 REETGKGANGRLRRKGYTPCIFYGPQMEKSVQGKLKTRDVERILATGRWESMRLNVTLPD 63 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 G E + +I ++ Q++P++D +H DFL++ +G +TV++P+ + +PG+K GG L Sbjct: 64 GTEEMCII-REVQVNPLTDCPLHVDFLRLIKGRKITVNIPIEVLGRESAPGVKDGGVLET 122 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + EV + NIPD +TVD++ L+IGD+IH+ D+ LPE + + +A +V Sbjct: 123 L-REVEVETLPMNIPDVLTVDVSALQIGDAIHVRDLALPEGVELKADPDEIVAVVV 177 >gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas ingrahamii 37] gi|226736354|sp|A1STD7|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37] Length = 203 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 1/172 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A R +GKG++R LR +PAI+YG + + + KDI K + F +++L Sbjct: 4 KLTATTRTDLGKGASRRLRHADLVPAIVYGADKEAVSLTFTHKDIIKAEGIEAFYSSVLD 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I V+ KD Q + H D L+V + VP+ FINE S IK GG Sbjct: 64 LEIDGVSEQVVLKDLQRHAFKARIQHLDLLRVDAKHKLHTTVPLHFINEGLSEAIKNGGI 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + +EV +LC ++P I VD++ ++IGD++H+ +I LP S+ +LN Sbjct: 124 VYRTINEVEVLCLPKDLPSFIEVDISTMEIGDTLHLSNITLPAGVESV-ELN 174 >gi|332306083|ref|YP_004433934.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173412|gb|AEE22666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 213 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +GKG++R LR ++PA++YG + + LS + + + F + +LTL Sbjct: 8 LDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTL 67 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 ++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ IK GG Sbjct: 68 NVDGKKVEAVVKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAESIKTLGGH 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +V + C N++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 128 AEHHMVDVEISCLPNDLPEFIEVDVANVELGQTLHLSDIALPEGVTSVE 176 >gi|315127047|ref|YP_004069050.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] gi|315015561|gb|ADT68899.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] Length = 204 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 2/166 (1%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F T ILTL++ Sbjct: 10 AELRVETGTGASRRLRREDKVPAILYGADKEAVSLTFAHKDMIKAQEDEGFYTHILTLNV 69 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 G E V I KD Q P L H DF +V + VP+ FI E K K G + Sbjct: 70 GGEKVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGEEKV--TKLGATVVH 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 EV + C ++P+ I VD++DL GDSIH+ D+ P+ S+ Sbjct: 128 QLTEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSVE 173 >gi|224823793|ref|ZP_03696902.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] gi|224604248|gb|EEG10422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] Length = 192 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R+++G ++R LR G++PA++YG ++ + L + L + F T IL Sbjct: 4 ELIAAKREQLGTSASRRLRHAGKLPAVVYGANTEAVSVVLDHNPVYYALKEEGFHTGILN 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L I E V+ +DYQ+ P +++H DF +V + V VP+ F+ + S +K QG Sbjct: 64 LVIDGEKQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLHFVGADASEAVKLQGA 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 K++ V EV + +P I VDL+ ++ G +IH+ D++LPE Sbjct: 124 KISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKLPE 167 >gi|56460038|ref|YP_155319.1| ribosomal protein L25 [Idiomarina loihiensis L2TR] gi|68053046|sp|Q5QV04|RL25_IDILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56179048|gb|AAV81770.1| Ribosomal protein L25 [Idiomarina loihiensis L2TR] Length = 221 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 5/171 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P +AL ++ + F Sbjct: 1 MAELDFNIQATVRTDKGKGASRRLRHEDKVPAILYGGQGEPIALALDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL+ + I KD Q P L H DF +V +G + ++P+ F+NE + G Sbjct: 61 YSHIVTLEFDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTNLPLHFLNETTAKG 120 Query: 121 IKQGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +K+ G VV H +V + ++P+ + VD+ +L +GD+IH+ D++LP Sbjct: 121 VKEEG--GVVVHHVNDVEITVLPKDLPEYLEVDIAELSVGDTIHLTDLKLP 169 >gi|198283910|ref|YP_002220231.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666710|ref|YP_002426544.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248431|gb|ACH84024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518923|gb|ACK79509.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 202 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 95/161 (59%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R+ +G+ ++R LR+ G +PA++YG+ I + A+ + K L + T ++TL Sbjct: 6 IAAQPREDIGRRASRRLRRTGMVPAVLYGDGKAAMGICIEARLLRKLLPDERAYTHVITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + +D Q+ P + ++H DFL+V G V +HVPV F+NE+ GIK GG L Sbjct: 66 QLPGSKETALIRDIQMHPYKEEVLHMDFLRVHAGEQVRLHVPVHFLNESTCAGIKAGGVL 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + EV + P + +P+++ VD+ L IGDS+H+ I +P Sbjct: 126 HRALVEVEVEAPVDRLPEALQVDIAGLHIGDSLHLSQISVP 166 >gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 493] gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii Dugway 5J108-111] gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 331] gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuG_Q212] gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuK_Q154] gi|71153140|sp|Q83AP1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042351|sp|A9KF12|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042352|sp|A9NAT6|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736301|sp|B6J9D8|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736302|sp|B6J329|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493] gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111] gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331] gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212] gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154] Length = 244 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 99/169 (58%), Gaps = 1/169 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +R+ GK +AR +R+ ++P +YG P+ I L KD+ K L S++ Sbjct: 1 MAAESFELIAELREFTGKSAARRMRRFEDKVPGTVYGAGKAPQSITLLQKDLLKALESES 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ILTL +G + VI K Q ++H DF ++ + ++VP+ F+ E+ P Sbjct: 61 TFSSILTLKVGDKKQKVILKALQRHHTKPKIVHIDFQRIKASEKLIMNVPLHFLGEDDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G++ GG ++ + EV + C ++P+ I VDL+ L++ +S+H+ +++LP Sbjct: 121 GVEAGGVVSHLQSEVEIRCLPADLPEYIEVDLSHLQLDESVHLSNLKLP 169 >gi|325473900|gb|EGC77088.1| 50S ribosomal protein L25 [Treponema denticola F0402] Length = 211 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R GK +A +R+ G+IPA++Y PI + ++ K L+ +TI+TL Sbjct: 6 LNANERSTYGKNAAVKMRRAGRIPAVMYDRHGKSVPIDVDEREFMK-LFKLVTESTIVTL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + V KD+Q D VSD + H DF +V G T+ V +R E G++ GG L Sbjct: 65 NAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL--EGSPEGVRHGGIL 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A I Sbjct: 123 ETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVAAI 179 >gi|157363317|ref|YP_001470084.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga lettingae TMO] gi|157313921|gb|ABV33020.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga lettingae TMO] Length = 216 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 +L A++R++ GK S R +R G IPA++YG ++P I L+ ++ K L + + Sbjct: 1 MRLKAMLRNERGKRSVRKMRAKGLIPAVVYGPETEPLSINLNKSEVEKLLAKASEALPVG 60 Query: 65 --LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + D E + V K Q+D V+D ++H DF + ++G T+ ++VP+R K+ G++ Sbjct: 61 LEIKYDDRSEEMEVFIKKVQVDKVTDEIVHIDFYKPAKGHTMKINVPIRVFG--KAIGVE 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V +E+ + + + D I +D+ L++G S+H++D+RLP ++ + Sbjct: 119 KGGILEIVHNELPVETLPSALIDHIEIDVTHLELGQSVHVKDLRLPSGMKALLHPEEALV 178 Query: 183 TIVAP 187 TIV P Sbjct: 179 TIVVP 183 >gi|319945392|ref|ZP_08019653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] gi|319741385|gb|EFV93811.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] Length = 215 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 1/169 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++SA R VG ++R LR+ Q+P I+YG + P +AL + L + F ++IL Sbjct: 2 QISAQERKDVGTSASRRLRRANQVPGIVYGGEAAPIQVALDHNTLYHALRVEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 +DI + V+ ++ Q P ++H DF +V+ +TV VP+ FIN SP +KQ Sbjct: 62 MDIDGKKQRVLLRNVQWHPYKQQVLHVDFQRVAANQKITVKVPLHFINGENSPAVKQTKA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +N V E+ + ++P+ I VDL +L + SIH+ I+LP+ +++ Sbjct: 122 VVNHVMTEIEVQVLPKDLPEFIEVDLAELAMEHSIHLSSIKLPKGVTAV 170 >gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] Length = 207 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR G++PAI+YG +DP I L +I L + F +IL Sbjct: 2 KFNATSRSDKGTSASRRLRHAGRVPAIVYGGTADPLSIELDHNEIFHALRKEAFHASILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + + V+ + Q P ++H DF +V T+T VP+ FIN + SP +K G+ Sbjct: 62 MQLDGKGQQVLLRAVQWHPYKPQVLHVDFQRVDAKQTITTKVPLHFINGDASPAVKLSGQ 121 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ V E+ + C ++P +I +DL +L G ++++ DI LP+ Sbjct: 122 IISHVMTELEITCLPVDLPQAIEIDLGELAAGGNVYLSDITLPQ 165 >gi|188992871|ref|YP_001904881.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. B100] gi|226694602|sp|B0RU99|RL25_XANCB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167734631|emb|CAP52841.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris] Length = 209 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEASSPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLP 168 >gi|171060169|ref|YP_001792518.1| 50S ribosomal protein L25/general stress protein Ctc [Leptothrix cholodnii SP-6] gi|226736334|sp|B1Y3Q0|RL25_LEPCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170777614|gb|ACB35753.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Leptothrix cholodnii SP-6] Length = 208 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R+ G G++R LR G++P I+YG P I L + L + F ++IL Sbjct: 2 KFVAFARELQGTGASRRLRHGGKVPGIVYGGSGKPTSIELDHNALYHALKKEAFHSSILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + V+ + Q+ +++H DF +V E + + VP+ F+NE +S +K Sbjct: 62 MELAGQSEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLHFVNEAESQAVKLDKC 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIAT 183 L N V E+ + C A +P+ +TVDL L G S+H++D++L K + + N +AT Sbjct: 122 LINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEASIKVVTHGRKNPVVAT 181 Query: 184 IV 185 +V Sbjct: 182 VV 183 >gi|260219880|emb|CBA26854.1| 50S ribosomal protein L25 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 227 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K A R K G G++R LR G+ P I+YG +P I L + L + F +TI Sbjct: 20 DMKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPLLIELDHNALWHALKKEAFHSTI 79 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++ + V+ +D Q+ P +++H DF +V + +++ VP+ F + SP +K Sbjct: 80 LDMEFNGKESKVLLRDVQMHPYKQLVLHIDFQRVEANTKLSMRVPLHFSGQENSPAVKTD 139 Query: 125 GKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 L N V E+ + C ++P+ I VDL+ L+ G S+H+ D+ LP+ T +++ Sbjct: 140 ACLINHVITELEVACLPADLPEFIAVDLSGLEKGKSLHVNDLALPKGTVAVTH 192 >gi|254384997|ref|ZP_05000332.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] gi|194343877|gb|EDX24843.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] Length = 196 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KLSA +RD GKGSAR R++ PA+IYG+ +DPK + + A + L + N Sbjct: 1 MSMSEVKLSAQIRDTFGKGSARQARRDALTPAVIYGHGTDPKHVNVDAHALQLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ D G EL VIPK Q P+ + H DFL V +G VTV V + + E Sbjct: 61 LISLDLGDAGTEL--VIPKAVQKHPLKRSVSHVDFLIVKKGEKVTVDVAI--VTEGD--- 113 Query: 121 IKQGGK-LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + GG L + + +S+ A +IP +TV + L+ G +IH D+ LP+ T+ +I Sbjct: 114 LAAGGNMLETLQNTISVEAEATHIPTEVTVSIAGLEAGATIHASDLVLPKGTTLAVDGDI 173 Query: 180 TIATIV 185 + +V Sbjct: 174 AVLQVV 179 >gi|261417545|ref|YP_003251227.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. Y412MC61] gi|297528420|ref|YP_003669695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|319765202|ref|YP_004130703.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] gi|261374002|gb|ACX76745.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC61] gi|297251672|gb|ADI25118.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|317110068|gb|ADU92560.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] Length = 210 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + + R +R G IPAI+YG + K I +SA ++ K L + T++LTL Sbjct: 5 LEAKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVSAAELEKVL-REGGRTSLLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G E V+ ++ Q DP+ L+HADF V + V + V VR + E +PG+K GG L Sbjct: 64 KVGGEDYSVLLREMQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVGE--APGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ P Sbjct: 122 QQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEINHEPSEVIATILPP 181 >gi|288554661|ref|YP_003426596.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] gi|288545821|gb|ADC49704.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] Length = 211 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 7/161 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTIL 65 L A R + + R +RK+G +PAI+YGN + KP+ + + + K R KN + Sbjct: 5 LQANPRTDLTGSATRQIRKDGHVPAILYGNKIESKPVYVESVEFLKTVREVGKN---GLF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L++ V+ D Q+DP+ + +H DF +V S + VPVR E +PG K+GG Sbjct: 62 SLNVDGSKHQVMIHDVQIDPLKNEYVHVDFFEVDMKSEIDADVPVRLTGE--APGTKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 L+ + +++S+ C N+IP+ I VD++ L IGDSI + D+R Sbjct: 120 VLSHLLYDISVKCLPNDIPEEIKVDVSGLNIGDSIQITDLR 160 >gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] Length = 208 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 103/181 (56%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R+ G IP++IYG+ +P+ + +A++ + + S +T++ L Sbjct: 6 LDATARVETGKGAARKIRQAGNIPSVIYGHGREPQSLTTNARETERLIKSIAVSSTVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 +I + + ++ Q P ++H DF ++ G TV+V P+ +I + G++ +GG Sbjct: 66 NIDGKTARTLIREIQRHPFKRSILHIDFQELVAGETVSVKCPIVYIGTPE--GVRLEGGI 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L+ + HE+ + +IP+ I VD++ +K+G S+H+ D++LP + T+ + Sbjct: 124 LDQIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVADLKLPAGIKVLDDATATVCVVQP 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|299820654|ref|ZP_07052543.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] gi|299817675|gb|EFI84910.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] Length = 213 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 97/164 (59%), Gaps = 3/164 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R++G+IPAI+YG S+ P+++ D+ K L +N + T+++ + V+V+ DYQ+ Sbjct: 27 VRESGRIPAIVYGYQSENVPVSVDELDLLK-LVRENGRNAVFTVNLDGKKVNVLLHDYQI 85 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 DP+ + L+H D L V + V V + + E S G+K+GG L V HEV++ + + Sbjct: 86 DPLKNKLVHVDLLAVDMKAEVEAEVRIDLVGE--STGVKEGGVLQQVLHEVTVSATPDKL 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 P+S+ VD+++L IGDS+ + I + ++ IAT+ AP Sbjct: 144 PESVEVDISELGIGDSVEVSKISTSKAFEIITDGEEVIATVTAP 187 >gi|302388649|ref|YP_003824470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] gi|302199277|gb|ADL06847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] Length = 210 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 3/187 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R GKG+ LR+NG++PA+ YG + + IA+ AK++ K L + + Sbjct: 3 QVTLTAEERKLAGKGTLNELRRNGKVPAVFYGKNIENRTIAVDAKELHK-LLKTHGEGVL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G E VI K+ Q D + + H DF +VS + V +P+ E + G+K G Sbjct: 62 IDLVLGGEKHTVIIKEIQRDALKGDITHVDFFRVSMTEKIEVDLPIVLKGEPE--GVKAG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L HE+++ +IP+ I VD++ L+IGD + ++DI+L +K + + + T+ Sbjct: 120 GVLQHQLHELTIEALPADIPEQIEVDISHLQIGDVLMVKDIKLSDKITVIDDPGEVVVTV 179 Query: 185 VAPISGS 191 +AP SG Sbjct: 180 LAPTSGE 186 >gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax citrulli AAC00-1] gi|166223655|sp|A1TT74|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1] Length = 210 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 94/164 (57%), Gaps = 1/164 (0%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L +++ Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVLDMEL 64 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLN 128 + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K +N Sbjct: 65 AGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFTGAEESPAVKIDKCMVN 124 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S Sbjct: 125 PVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVS 168 >gi|109898884|ref|YP_662139.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudoalteromonas atlantica T6c] gi|123360668|sp|Q15SQ3|RL25_PSEA6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109701165|gb|ABG41085.1| LSU ribosomal protein L25P [Pseudoalteromonas atlantica T6c] Length = 213 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 95/169 (56%), Gaps = 1/169 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R +GKG++R LR ++PA++YG + + LS + + + F + +LTL Sbjct: 8 LDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTL 67 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 ++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ IK GG Sbjct: 68 NVDGKKVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAESIKTHGGH 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +V + C ++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 128 AEHHMVDVEISCLPADLPEFIEVDVTNVELGQTLHLSDIALPEGVTSVE 176 >gi|224368790|ref|YP_002602951.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfobacterium autotrophicum HRM2] gi|259646683|sp|C0QAZ0|RL25_DESAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223691506|gb|ACN14789.1| RplY [Desulfobacterium autotrophicum HRM2] Length = 216 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 5/185 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GK +AR LR N +PA++YG D PI++S D++ + + L Sbjct: 6 LKAEPRKGRGKSAARHLRNNDAVPAVLYGAKMDSMPISVSTLDLTTMVRVHGSSGLFINL 65 Query: 68 DIGKELV---HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 I + V V+ K+ Q+D +H DF ++ +T+ VPV + E S G+K G Sbjct: 66 AINGDTVPSRTVMLKEIQMDTFDLKYLHVDFQAINVSEKITISVPVEAVGE--SVGVKAG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + ++ E+ ++C ++P+ I +D DL++GDS+H+E+I L +N T+ T+ Sbjct: 124 GMIQLIRRELDIICKPGDMPEVIQIDTTDLEVGDSVHVEEIDLGADVEIPHDVNFTVLTV 183 Query: 185 VAPIS 189 V P S Sbjct: 184 VPPTS 188 >gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa 9a5c] gi|71153678|sp|Q9PA77|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c] Length = 208 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 6/166 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F ++IL Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILD 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP K G Sbjct: 65 LNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKASG 124 Query: 126 KLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ H EV + C ++P+ I VDL+ L +G IH+ DI P Sbjct: 125 V--VITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHLSDITFP 168 >gi|21230347|ref|NP_636264.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769659|ref|YP_244421.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. 8004] gi|71153677|sp|Q8PC62|RL25_XANCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81304386|sp|Q4URC2|RL25_XANC8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21111900|gb|AAM40188.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574991|gb|AAY50401.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. 8004] Length = 209 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++IL L++ + Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K VV H Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEAISPAGKSSEV--VVTH 129 Query: 133 ---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 130 ELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLP 168 >gi|108803738|ref|YP_643675.1| 50S ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] gi|108764981|gb|ABG03863.1| LSU ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] Length = 226 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAK--DISKRLYSKNFMT 62 L A +R GKG AR LR +G IPA++YGN S +A+ AK D + + Y N + Sbjct: 5 VALEARIRQGRGKGEARRLRASGMIPAVLYGNGSAQSTALAVPAKVVDYTLQHYGDNALY 64 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L LD GK+ V+ D Q DP++ L+H DF V + V VP+ E G+K Sbjct: 65 D-LELDGGKKTARVV--DVQRDPLTGRLLHVDFAPVDMTERIEVAVPLALAGE--PAGVK 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V +EV + +IP I VD++ L + +++ + D+RLPE +S +A Sbjct: 120 EGGVLQQVAYEVRVEALPGDIPQEIEVDVSGLGMQENLTLGDVRLPEGLRLVSDPEEVVA 179 Query: 183 TIVAP 187 T+ P Sbjct: 180 TVTPP 184 >gi|85859731|ref|YP_461933.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophus aciditrophicus SB] gi|109893400|sp|Q2LUK6|RL25_SYNAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85722822|gb|ABC77765.1| LSU ribosomal protein L25P [Syntrophus aciditrophicus SB] Length = 200 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 107/189 (56%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSK 58 M+ +E K A +R + GK AR +R+ G IPA++YG +DP ++++A D+ L + Sbjct: 1 MEARELK--ANVRKESGKEQARRMRREGLIPAVLYGPGTDPVSLSVNASDLKTALKGAEE 58 Query: 59 NFMTTILTLDIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 N + ++ D G+ + + + ++ Q++P+++ HADF + T VP+ F E + Sbjct: 59 NVLIKLIIDDSGRLMEKNSLIRELQIEPLTNNFFHADFYALRMDQESTFDVPIHF--EGQ 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GI++GG+L + E+ + C + +PD ITVD++ L +GD++ + D+ L E Sbjct: 117 PVGIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDLSLSESIRCFDSK 176 Query: 178 NITIATIVA 186 +I + TI A Sbjct: 177 DIVLVTIAA 185 >gi|90408736|ref|ZP_01216883.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] gi|90310153|gb|EAS38291.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] Length = 205 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 5/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R +GKG++R LR +P I+YG DP + K++ K + F ++IL Sbjct: 4 KLVAQTRTDLGKGASRRLRHAELVPGIVYGIGKDPISLTFEQKELRKIESVEAFYSSILD 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I + V+ K Q + + H D L+V + +P+ FIN + + +K GG Sbjct: 64 LEIDGTVEKVVLKALQRHAFKEQIQHLDLLRVDASHKLQTTIPLHFINADTNEALKAGGV 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNITI 181 L + +EVS+ C ++P IT DL +L++G S+H+ D+ LP+ S+ ++ + +I Sbjct: 124 LTQIMNEVSISCLPTDLPAFITADLANLEMGTSLHISDLVLPKGVESVELIKGTEYDRSI 183 Query: 182 ATIVA 186 A+I A Sbjct: 184 ASISA 188 >gi|325265863|ref|ZP_08132549.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] gi|324982501|gb|EGC18127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] Length = 190 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R G G++R LR ++PA++YG + + K IA+ K++ L + F T +L L Sbjct: 6 IQATLRSAQGTGASRRLRNENKVPAVVYG-LGESKAIAVDHKEMYFALQKEAFFTQVLKL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 I + VI +DYQ+ PV + H DF + V + +PV +N KS +K Q G+ Sbjct: 65 SIDGKEQDVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRMKLPVHIVNAEKSHAVKLQSGR 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V +L NIP ++ +D + GD +H+ DI PE S++ N+ +AT Sbjct: 125 VSLLMTVVDVLVNPKNIPAALELDCEKVVAGDILHLSDITYPEGVQSIALKRNSNLAVAT 184 Query: 184 I 184 + Sbjct: 185 V 185 >gi|118603027|ref|YP_904242.1| 50S ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223716|sp|A1AXW4|RL25_RUTMC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118567966|gb|ABL02771.1| LSU ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 222 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 92/162 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ RD GKG++ LR+N +IPAI+YG P+ I L +I++ L ++ T++L L Sbjct: 5 INALTRDDQGKGASHRLRRNHKIPAIVYGTGKAPRNITLDVFEITRLLENEESYTSVLDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + K+ VI KD Q P +I+ H DFL+++ + VP+ F E + ++ G L Sbjct: 65 IVDKKKEAVIIKDLQRHPAKNIVTHVDFLRINLKQAIVTSVPLHFNGEENNEAMRLGAIL 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 N V + C ++P +I VD+++L +G+ I + +P+ Sbjct: 125 NQFVTSVEVSCLPTDLPHAIDVDISNLTMGEHISFTGLNIPK 166 >gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium petroleiphilum PM1] gi|166223695|sp|A2SKU2|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1] Length = 214 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R+ G G++R LR +G++P I+YG +P I L + L + F ++L Sbjct: 2 KFVAYPRELQGTGASRRLRISGKVPGIVYG-AGEPLKIELDHNALFHALKKEAFHASLLD 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 ++ + V+ +D Q+ ++H DF +V + VT VP+ F+NE +PG+K G Sbjct: 61 MEFNGKSQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLHFVNEENAPGVKLDKG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIAT 183 ++ V E+ + C A+ +P+ +TVDL +L G S+H+ D++LP K + N IAT Sbjct: 121 LISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPSVKVVLRGKKNPVIAT 180 Query: 184 IV 185 +V Sbjct: 181 VV 182 >gi|206895312|ref|YP_002247107.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] gi|206737929|gb|ACI17007.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] Length = 211 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 5/163 (3%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELV 74 + G + +RKNG +PA++YG + P+ L S+ + + + L LD+ ++V Sbjct: 12 QTGTRKVKKIRKNGYVPAVLYGQDMEATPLLLER---SQVIRERVTLGRSLELDVDGKIV 68 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 VI K+ Q+DP+S +IH DF +S GSTVTV +P+ + E GIK+GG L E+ Sbjct: 69 RVIVKEEQVDPISQEVIHLDFQALSAGSTVTVSIPIVLVGE--PVGIKKGGILEFPTREI 126 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + P + + +TVD++++ IGD IH+ ++ LP + + L Sbjct: 127 EVELPTEKLVEQVTVDVSNMDIGDIIHIGELDLPPEAKIFADL 169 >gi|307566372|ref|ZP_07628811.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] gi|307344949|gb|EFN90347.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] Length = 196 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 98/167 (58%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK-PIALS----AKDISKRLYSK 58 KE KLS R+ +GK ++RL+RK G +P +YG + P+A+S ++ K +Y+ Sbjct: 2 KEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGLPVAVSFSSPMSELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N LT+D K L + KD Q P +D L+H DF +V+E + + VPV+ + Sbjct: 62 NIYGVELTIDGEKHLA--VMKDLQFHPTTDALLHVDFYEVTEEKPIVMGVPVKL--SGLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG+LN+ ++++ P N +P+++ +D+ +L++G +I + D+ Sbjct: 118 QGVRDGGRLNMSIRKINVKAPFNKMPETLNIDVTNLQLGKAIKVGDL 164 >gi|294669393|ref|ZP_06734472.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308803|gb|EFE50046.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 190 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R+ G G++R LR+ GQ+PA++YG + IAL K + L ++F T+++ Sbjct: 4 ELQATVREAQGTGASRRLRREGQVPAVLYGENQEAVAIALDHKTVFYALEKESFHTSLIK 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L + + VI +D+Q+ P + H D V + + +P+ +N +S +K Q G Sbjct: 64 LALNGKTHDVIVRDFQVHPFRQQIQHLDLQVVDLNKPLKIRLPIHVVNAEQSKAVKLQSG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIA 182 +++++ V ++ NIP ++ +D + GD +H+ DI+ PE SS++ N+ +A Sbjct: 124 RVSLLTTGVEVIVDPKNIPAALELDCAQVVAGDILHLSDIQYPEGVSSVALKRNSNLAVA 183 Query: 183 TI 184 T+ Sbjct: 184 TV 185 >gi|121603807|ref|YP_981136.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas naphthalenivorans CJ2] gi|166223703|sp|A1VKN7|RL25_POLNA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120592776|gb|ABM36215.1| LSU ribosomal protein L25P [Polaromonas naphthalenivorans CJ2] Length = 218 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 1/168 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R K G G++R LR G+ P I+YG ++P I + + + + F +IL Sbjct: 2 KFVAFERAKQGTGASRRLRITGRTPGIVYGGTAEPILIEIDHNALWHAIKKEAFHGSILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++G V+ +D Q+ P + H DF +V + +TV VPV F E +SP +K Sbjct: 62 MELGGTEHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVHFSGEEESPAVKTENC 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 L V E+++ C +IPD I VDL L G S+H++DI LP++ + Sbjct: 122 LVTHVLTEMTVSCFPADIPDFIAVDLGGLTKGKSLHVKDIVLPKRVKA 169 >gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas sp. JS666] gi|123165230|sp|Q12E00|RL25_POLSJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91696413|gb|ABE43242.1| LSU ribosomal protein L25P [Polaromonas sp. JS666] Length = 227 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R K G G++R LR G+ P I+YG +P I L + + + F ++L Sbjct: 2 KFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPSLIELDHNALWHAIKKEAFHASVLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++G + V+ +D Q+ P ++H DF +V + +T+ VP+ + E +SP +K + Sbjct: 62 MEMGGKTEKVLLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLHYSGEEESPAVKVENC 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +N V E+S+ C ++P+ I ++L LK G S+H++DI LP+ Sbjct: 122 LVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPK 165 >gi|285017303|ref|YP_003375014.1| 50s ribosomal protein l25 [Xanthomonas albilineans GPE PC73] gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans] Length = 214 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 9/161 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN--FMTTILTLDIG 70 R+ GKG++R LR++G IPAI+YG D KP+ + L S+N F ++IL+L + Sbjct: 12 REVEGKGASRRLRRDGVIPAIVYG--GDLKPVNIQLDHNEVWLASQNDWFYSSILSLSLN 69 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 ++ V+ +D Q P +++H DF +V++ + VP+ F++E+ SP K VV Sbjct: 70 GDVQKVLLRDMQRHPYKQLIMHIDFQRVNDNEVLHASVPLHFLHEDVSPAGKSAEV--VV 127 Query: 131 CH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 H E+ ++C ++P+ + VDL+ L +GD IH+ D++LP Sbjct: 128 THELNEIQVVCLPKDLPEFVEVDLSTLSVGDVIHLSDLKLP 168 >gi|189499938|ref|YP_001959408.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides BS1] gi|226736296|sp|B3EPZ5|RL25_CHLPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189495379|gb|ACE03927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium phaeobacteroides BS1] Length = 209 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 4/173 (2%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVI 77 K +A+ LR G++PA++Y + I + + + K ++S LT GKE + Sbjct: 15 KNAAKKLRDQGKVPAVVYHKGEETIHICVDERSLKKLVHSSESHLIDLTFPDGKEKRSFL 74 Query: 78 PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV+D +IHADF S G + + VP FI E ++PG+ GG + V+ H + + Sbjct: 75 -KEVQFDPVTDKIIHADFQFFSAGEVLEMDVPTTFIGEGEAPGVVAGGNVQVILHSLKVK 133 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPE---KTSSMSQLNITIATIVAP 187 +NIP IT+D++ +++G ++H+ +I + K +S + ++ +IVAP Sbjct: 134 AVPSNIPQHITIDVSGMELGQTMHIREIPVETYEGKFEIISDPDSSVVSIVAP 186 >gi|292493880|ref|YP_003529319.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] gi|291582475|gb|ADE16932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] Length = 211 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 100/165 (60%), Gaps = 2/165 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R + GKG++R LR+ G++PAI+YG +P + L + + L + F + ILT Sbjct: 6 ELHADVRGEQGKGASRRLRRAGKVPAILYGAGKEPVSLTLDHNLLFQHLGYEAFYSHILT 65 Query: 67 LDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 + + + K Q DP + + ++H D +VS +++ V + F+ ++ + G++Q G Sbjct: 66 IHANGKTEKAVLKALQRDPANPNKVLHLDLQRVSPTQKLSISVHLHFMGDDVARGVRQEG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G + + ++V + C A ++P+SI VDL DL G+++H+ D++LPE Sbjct: 126 GVVARLLNDVEITCLAKDLPESIEVDLTDLGAGEALHLSDLKLPE 170 >gi|119897045|ref|YP_932258.1| 50S ribosomal protein L25/general stress protein Ctc [Azoarcus sp. BH72] gi|166223661|sp|A1K3G6|RL25_AZOSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119669458|emb|CAL93371.1| 50S ribosomal protein L25 [Azoarcus sp. BH72] Length = 200 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 5/165 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + +A R+ G ++R LR+ Q+P IIYG D +PI L ++ L + F ++L+ Sbjct: 4 EFNATKREGQGSSASRRLRRAAQVPGIIYGAGKDAQPITLDHNELYHLLKKEAFHASVLS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ V+ +D Q ++H DF +V + + VP+ F+N + +P +K GG Sbjct: 64 INVEGAKETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFVNGDNAPAVKLGG- 122 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 N++ H E+ + C +++P+ I VDL L+ G SIH+ ++LP Sbjct: 123 -NIIAHVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKLP 166 >gi|269468550|gb|EEZ80199.1| ribosomal protein L25/general stress protein Ctc [uncultured SUP05 cluster bacterium] Length = 218 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 85/149 (57%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR LR+ ++PAI+YG DP I L+ +I+ L T++L L I K+ VI KD Sbjct: 3 ARRLRREEKVPAIVYGAGKDPSAITLNIHEITHLLEKDGAFTSVLDLAIDKKTESVIIKD 62 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q P + + H D L+++ T+T ++P+ FI E+ + ++ G LN + V + C Sbjct: 63 LQRHPAKNCITHVDLLRINMKQTITTNIPLNFIGEDDNEAMRLGAILNQFINTVEVSCLP 122 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++P+ I VD++ L+IGD I + + LPE Sbjct: 123 ADMPNGIDVDISGLEIGDHISLTGLSLPE 151 >gi|254486127|ref|ZP_05099332.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] gi|214042996|gb|EEB83634.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] Length = 186 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 1/159 (0%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 +P I++G DP PI L + +L + F T+ + + G + V VI +D Q V D Sbjct: 2 VPGIVFGGDVDPLPINLDFNKLLTKLRAGRFKATLFNMKVEGHDDVRVICRDVQRHVVKD 61 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSIT 148 + H DF+++ + + + + V E + PG+K+GG L +V EV L+ A +IPD IT Sbjct: 62 LPTHVDFMRLKRTTKINLFIQVEVSGEEECPGLKKGGVLTLVRPEVELVVTAGDIPDHIT 121 Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD++ L+IGDS + ++ LPE + + + IA + AP Sbjct: 122 VDISGLQIGDSATIANVVLPEGSKPVIDRDFVIAQVSAP 160 >gi|145593348|ref|YP_001157645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora tropica CNB-440] gi|145302685|gb|ABP53267.1| LSU ribosomal protein L25P [Salinispora tropica CNB-440] Length = 233 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 11/185 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + + + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-RGGANQL 61 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +DI G +++ +PK Q DP+ D H D L V G VTV VPV+ + E Sbjct: 62 FAIDISDGTQVL-ALPKAIQRDPIKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAAK---- 116 Query: 123 QGGKLNVVCHE-VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V H+ +S+ A N+PD + + L+ G + D++LP + + + Sbjct: 117 --GTLIVHDHDSLSVTADATNVPDHLDASIEGLEAGSQVAAADVQLPAGVELATDPELPV 174 Query: 182 ATIVA 186 A + A Sbjct: 175 AAVTA 179 >gi|186475083|ref|YP_001856553.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phymatum STM815] gi|226736291|sp|B2JCN8|RL25_BURP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|184191542|gb|ACC69507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phymatum STM815] Length = 203 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 3/184 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R+ G G++R LR +G+ P I+YG +P+ I L + L + F ++IL Sbjct: 2 KVVAFERNLQGTGASRRLRNSGKAPGIVYG-AGEPQLIELDHNALWHALKKEAFHSSILE 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K GG Sbjct: 61 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLGGA 120 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ V +E+ + C +P+ I VDL ++ G S+H DI LP + ++ L IV Sbjct: 121 IISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDIALPAGVALVAHLVAENPVIV 180 Query: 186 -API 188 API Sbjct: 181 SAPI 184 >gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella avium 197N] gi|109893346|sp|Q2KYA2|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N] Length = 198 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 2/165 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R G ++R LR+ G++PAI+YG + P I L +I L + F +ILT Sbjct: 2 KFNATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIFHALRKEQFHASILT 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + + G V+ + Q P ++H DF +V + VP+ F+N SP +K G Sbjct: 62 MALEGGANEQVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFVNAETSPAVKLSG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ V EV + C ++P I VDL +L G SIH +DI LP+ Sbjct: 122 AIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPK 166 >gi|332532472|ref|ZP_08408350.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] gi|332038115|gb|EGI74562.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] Length = 203 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F Sbjct: 1 MSNKTYTYNAELRVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P L H DF +V VP+ FI E Sbjct: 61 YTHILTLNVDGEAVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEEIV-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 K G + EV + C +P+ I VD++ +GDS+H+ D+ P+ SS+ Sbjct: 119 TKAGATVVHQLTEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 172 >gi|241764085|ref|ZP_04762123.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] gi|241366616|gb|EER61097.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] Length = 213 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 97/166 (58%), Gaps = 1/166 (0%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L +++ Sbjct: 5 AYERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVLDMEV 64 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLN 128 V+ +D Q P +++H DF +V + + + + VP+ F N +S +K +N Sbjct: 65 AGTTSKVLLRDVQYHPYKQLVLHIDFQRVDDKTKLHMKVPLHFSNAEESDAVKVDKCMVN 124 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 V +E+ + C +++P+ I VDL+ LK G S+H++DI+LP+ S++ Sbjct: 125 PVVNELDVTCMPSDLPEFIAVDLSTLKKGVSLHLKDIKLPKGVSAV 170 >gi|169825682|ref|YP_001695840.1| 50S ribosomal protein L25 [Lysinibacillus sphaericus C3-41] gi|226736335|sp|B1HSV6|RL25_LYSSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168990170|gb|ACA37710.1| 50S ribosomal protein L25 (General stress protein CTC) [Lysinibacillus sphaericus C3-41] Length = 198 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN ++ +L Sbjct: 5 LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSI-QKNGQNSVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + V+V+ + Q + D + H DFL ++ + V VP++ I + S G+ +GG L Sbjct: 64 DLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEVDVPIKLIGQ--SVGVSEGGIL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + TIVAP Sbjct: 122 MQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRHQTPVEIISEDDYLLVTIVAP 181 Query: 188 ISG 190 +S Sbjct: 182 VSA 184 >gi|288926807|ref|ZP_06420716.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] gi|288336436|gb|EFC74813.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] Length = 201 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 98/169 (57%), Gaps = 9/169 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALS----AKDISKRLYSK 58 KE ++ R +GK ++RLLRK G +P +YG D KP+ALS ++ K +Y+ Sbjct: 2 KEINVTGQKRTDLGKKASRLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + + Sbjct: 62 HIY--VINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ Sbjct: 118 QGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF 166 >gi|282858294|ref|ZP_06267479.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] gi|282588925|gb|EFB94045.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] Length = 197 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 9/162 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK-PIALS----AKDISKRLYSK 58 KE KLS R+ +GK ++RL+RK G +P +YG + P+ALS ++ K +Y+ Sbjct: 2 KEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGIPVALSFASPMSELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N LT+D K L I KD Q P +D L+H DF +V+E + + VPV+ + Sbjct: 62 NIYGVELTIDGEKHLA--IMKDLQFHPTTDALLHVDFYEVTEEKEIIMGVPVKLAG--LA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 G++ GG++N+ ++++ P N IP+ +++D+ L++G +I Sbjct: 118 QGVRDGGRMNMSIRKINVKAPFNKIPEFLSIDVTALQLGKAI 159 >gi|325962653|ref|YP_004240559.1| 50S ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] gi|323468740|gb|ADX72425.1| LSU ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] Length = 206 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 13/185 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG AR R IPA+IYG+ +DP + L AK + + + N + Sbjct: 3 EQKLAAEVRTEFGKGYARRARMANLIPAVIYGHGADPIHVTLPAKATTLAVRTAN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+LDI E + KD Q DP+ I+ H D L V +G VTV VPV E +PG Sbjct: 60 LSLDINGEGHLALVKDVQRDPIKQIIEHIDLLTVRQGEKVTVDVPVHVSGET-APGTVHN 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-----LNI 179 +L V VSL A ++P+S+ V + G+ IH D+ LP+ + ++ +NI Sbjct: 119 LELTV----VSLEAEATHLPESVEVSIEGRAAGEHIHASDLVLPKGSVLLTDAEALVINI 174 Query: 180 TIATI 184 + AT+ Sbjct: 175 SEATV 179 >gi|227537439|ref|ZP_03967488.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242713|gb|EEI92728.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 198 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ + Sbjct: 2 KSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQTH-LSVSAADLKPVLYTPEVV-- 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + I +D Q P++D++IH DFL++S+ V+V++PV SPG+K Sbjct: 59 FVELDINGKKSKAIVQDAQFHPLTDLVIHIDFLELSDDKEVSVNIPVTLTG--TSPGVKM 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL + + NN+P SI V + L++G S+ + ++L Sbjct: 117 GGKLVQKLRTLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL 160 >gi|296122874|ref|YP_003630652.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] gi|296015214|gb|ADG68453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] Length = 216 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 5/181 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K+S R K+G R LR +G +P I+YG+ +P+P+ + I + S + + Sbjct: 4 DSKVSVKKRQKLGTAETRRLRLSGLVPGIVYGHQQEPQPVVVDETLIHPIVVSGH---KV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD+ L I +D Q+DP + ++ H DF++V VTV V + + +PGI G Sbjct: 61 VDLDVEGVLEKAIIRDVQVDPFTRLIQHIDFMRVDPNERVTVDVAIEL--KGTAPGILSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L H + + C A IPDSI V ++DL++G IH+ ++ +P +Q + + + Sbjct: 119 GMLEHQLHSIKVDCLAYQIPDSIVVKVSDLQLGGVIHVNELEIPPGVHVQTQGELIVVHV 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|307823425|ref|ZP_07653654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] gi|307735410|gb|EFO06258.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] Length = 199 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 88/156 (56%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GK +AR R+ G +PA+IYG +P+ + L+ ++ K L + + +L ++I + Sbjct: 12 RGQSGKSAARRARRAGNVPAVIYGGHGEPQMLLLNHNEVIKHLAHEAVYSHVLGVNIDGK 71 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K Q P ++H DFL+V+ + VHVP+ F+NE S G K+GG + Sbjct: 72 TERVVLKGVQRHPAKFQVLHMDFLRVTMSEALKVHVPLHFVNEQTSVGGKKGGIVTHAMI 131 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V + C +PD I VDL L IG+S H+ DI LP Sbjct: 132 DVEVSCLPAALPDYIEVDLGGLDIGESAHLSDIVLP 167 >gi|239981714|ref|ZP_04704238.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291453574|ref|ZP_06592964.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291356523|gb|EFE83425.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] Length = 196 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 13/171 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR +R+ ++P ++YG+ ++P I L ++ L + N + Sbjct: 3 EVKISAETRSEFGKGAARRIRRESKVPGVVYGHGAEPAHIVLPGHELMMALKTSNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 ++LD+G + VIPK Q D + L+H D L V G V V +PV + +PG Sbjct: 60 ISLDLGGKSELVIPKAVQRDALKGHLVHIDLLTVKRGEKVQVEIPV-VAEGDLAPGA--- 115 Query: 125 GKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 N++ H +S L A NIP+S+TV + L GDS+ +DI+LP+ S Sbjct: 116 ---NLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDIKLPKGVS 163 >gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] Length = 202 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELV 74 + GK +AR +R+ G +P I+YG+ +P P + + +Y+ T ++ L + + Sbjct: 12 ETGKRAARAIRREGWVPCILYGHHVEPIPFQMLESKLRPLIYTTE--THLVKLQLNGKTW 69 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 I KD + PV+D +HADF + VTV VPV+ + + G+++GG L +V HE+ Sbjct: 70 DCILKDVEFHPVTDRPLHADFQVLRAEEKVTVTVPVQIVG--TAIGVQRGGVLQIVTHEL 127 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + C +IP I +D+++L IGD+IH+ D++ E + T+ I AP Sbjct: 128 EVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQF-EGLEFEDAPDQTVVVIAAP 179 >gi|145590100|ref|YP_001156697.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189042364|sp|A4T069|RL25_POLSQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145048506|gb|ABP35133.1| LSU ribosomal protein L25P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 213 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 2 KVVAFERSVQGTGASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 62 LEIDGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFTNADTSAAVKLQGA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ + E+ + C ++P+ + VDL +++G IH +DI LP+ Sbjct: 122 VISHILTELEVSCLPADLPEFVEVDLAKIEVGHGIHAKDIALPK 165 >gi|284046684|ref|YP_003397024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] gi|283950905|gb|ADB53649.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] Length = 218 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 102/188 (54%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L+ R+ G + R LR++G +P I+YG +DP P + A+++ L Sbjct: 1 MAAEETTLTVAPREIEGSRATRRLRRSGLVPGIVYGGDADPLPFQVDARELRNALAHGGA 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + LTLD + V+ KD+ PV+ ++H D L+V + V V IN + +PG Sbjct: 61 VIQ-LTLDGAQ--TPVVLKDHHRHPVNGNMLHVDLLRVDLTQRIHATVVVEVINADDAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG L V E+++ N IPD+I +D++ +++GD++++ + P + + L T Sbjct: 118 IKGGGVLEQVTREINIEALPNEIPDTIELDVSSVEVGDTVYLSALTPPSGVALLDDLEET 177 Query: 181 I-ATIVAP 187 + +++AP Sbjct: 178 VLVSVLAP 185 >gi|332671546|ref|YP_004454554.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] gi|332340584|gb|AEE47167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] Length = 207 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 10/184 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A R + GKG+AR LR+ Q+PA++YG+ SDP ++L + + + + Sbjct: 3 EVKLVATARTEFGKGAARRLRRAHQVPAVLYGHGSDPLHVSLPGHET---MLAVKHANAL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++ + I KD Q++PV +++ H D L V +G V V VPV E+ Sbjct: 60 FEIELEGKTTLAIAKDVQIEPVRNVIEHVDLLIVKKGEKVAVEVPVHVQGESAP------ 113 Query: 125 GKLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L+VV +SL A ++P+++ VD+ L+ G +H D+ LP+ + ++ + T Sbjct: 114 GTLHVVETQALSLEAEATHLPENVVVDIAGLEAGAIVHAGDVTLPKGATLLTDAETIVVT 173 Query: 184 IVAP 187 + P Sbjct: 174 VSLP 177 >gi|152997607|ref|YP_001342442.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] gi|254801053|sp|A6W1C8|RL25_MARMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150838531|gb|ABR72507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] Length = 192 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 1/171 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R + GKG++R LR G +PA+IYG + P I+ ++ K + + F+T ++ + Sbjct: 5 INAVARTQEGKGASRRLRNEGLVPAVIYGGETAPVSISFKDNELLKAVGTPGFLTGLVEV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQGGK 126 + + V+ K Q P + ++H D + +T VP+ FIN +S G+ KQGG+ Sbjct: 65 TVEGKTEQVLVKALQRHPSTGAVMHMDLQRAQADKAITTRVPLSFINAAQSEGVSKQGGR 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 L V + C N+P+ +TVD+ ++ H+ D+ LPE +S L Sbjct: 125 LTVESKLAEVRCLPANLPEVLTVDVIKGQLDQIFHLSDVILPEGVELVSLL 175 >gi|301092281|ref|XP_002996999.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] gi|262112188|gb|EEY70240.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] Length = 251 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK------PIALSAKDISKRLYSKNFM 61 L V+R+ G ++R LRK G +P ++YG + K + A + R + Sbjct: 33 LQLVVREGEGSRASRRLRKKGLLPGVLYGEGEEGKDERMLVSLPTRAFEREHRKLWTSIE 92 Query: 62 TTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +G V +D QLDPV+D+ + +FL+ G TV++ P+ ++NE SPG Sbjct: 93 NQVFHVQVGDHPPVKAYMRDVQLDPVTDVPLAVNFLRFKPGRTVSI--PITYLNEEGSPG 150 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG +N + H + + IP ++ +D+N L +GD +++E I+ PE NI Sbjct: 151 LKRGGFINHIHHSLDCTIFTDKIPITLQIDVNGLHVGDKVYLESIKFPEGVVP----NIP 206 Query: 181 IATIVAPISG 190 ++VA I+G Sbjct: 207 EGSLVAKIAG 216 >gi|225181558|ref|ZP_03735000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] gi|225167806|gb|EEG76615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] Length = 214 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ AV R+KV K + LR +G +P I+YG D IA+ +KDI L S + Sbjct: 2 ERVQVQAVPREKVTKSQLKELRNSGMVPGIVYGQKDDAVAIAVDSKDIISILQSAAGTNS 61 Query: 64 ILTLDIGKELVHVIPKDYQLDP-VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L + VI K+ D + D H DFL++S + V VPV F + + G+K Sbjct: 62 LVDLAVEGNKETVIIKELVEDIFIQDRFTHVDFLRISLKDKLEVQVPVIFTGD--AVGVK 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + EVSL C IP+SI +D+++L +G+++ + D+ +P +++ + + Sbjct: 120 EGGTLQPLLREVSLKCLPTEIPESIELDISNLSVGETLTVGDLTVPASAELLNEADEAVV 179 Query: 183 TIVAP 187 ++ AP Sbjct: 180 SVAAP 184 >gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] Length = 155 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 79/135 (58%) Query: 53 KRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 K L F++T++ L++ + V+ + Q V D+ H DFL+++ + V +H+PV F Sbjct: 8 KTLRQGGFLSTLIDLNVDGKTERVVCRGVQRHVVKDLPTHVDFLRLAPTTRVKLHIPVHF 67 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 NE +PG+K GG + V E+ L AN+IP+ +TVDL KIGD IH++D+ LP+ Sbjct: 68 ENEAAAPGVKLGGTVVHVRSEIELEVTANDIPEFVTVDLTGRKIGDVIHIQDVTLPKGAV 127 Query: 173 SMSQLNITIATIVAP 187 + N IA I AP Sbjct: 128 PTTDRNFAIANISAP 142 >gi|149369577|ref|ZP_01889429.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] gi|149357004|gb|EDM45559.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] Length = 204 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 95/161 (59%), Gaps = 9/161 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI--SKRLYSKNFM 61 K ++ R+ VGK + + LR G++P ++YG + PI SA ++ SK +Y+ + Sbjct: 2 KSITINGSQRESVGKKATKALRDAGKVPCVVYGGEA---PIHFSADELAFSKLVYTPDVH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ LD GK+ V I +D Q PV+D ++H DF Q+S+ V + +PVR ++ G+ Sbjct: 59 TVVIELD-GKK-VDAILQDIQFHPVTDRILHIDFYQISDDKEVMLEIPVRITGNSR--GV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + GG L +V ++ + N+PD I VD+ ++KIGD +++ Sbjct: 115 RNGGTLRIVSRKLRVKAIPANLPDVIEVDITEMKIGDKLYV 155 >gi|313835378|gb|EFS73092.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA2] gi|314929235|gb|EFS93066.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL044PA1] gi|314972372|gb|EFT16469.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA3] Length = 200 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G+E + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ + +D+ L+ G +I++ D++LPE TS + AT+V Sbjct: 123 FNEIEVQADLL----NIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATVVF 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|305665462|ref|YP_003861749.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] gi|88710218|gb|EAR02450.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] Length = 219 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 94/155 (60%), Gaps = 8/155 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFMTTILTLDIG 70 R+ VGK + + LR G++P ++YG KP+ SA +++ + +Y+ N T ++ L+ G Sbjct: 11 RESVGKKATKALRNAGKVPCVVYGG---EKPLHFSANELAFKNLVYTANAHTVVVELENG 67 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + V+ + +D Q PV+D +IH DF Q+ + VT+++PVR E SPG++ GG+L Sbjct: 68 DK-VNAVMQDIQFHPVTDKIIHIDFYQLFKDKEVTMNIPVRL--EGNSPGVRNGGRLLFR 124 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++++ N+ D VD++ LKIGD+I +E + Sbjct: 125 KRKLTIKAFPENLIDFFKVDISTLKIGDNISVESL 159 >gi|281412600|ref|YP_003346679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] gi|281373703|gb|ADA67265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] Length = 215 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + T I + Sbjct: 4 LEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQLI 63 Query: 68 ---DIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 D G + V K Q D VS+ ++H DF + ++G + ++VP++ + K G++ Sbjct: 64 IKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVGVE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V E+ + + +P I VD++ L +GD IH D++LPE + + + Sbjct: 122 KGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEAVV 181 Query: 183 TIVAP 187 +++ P Sbjct: 182 SVLVP 186 >gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens SBW25] gi|259646693|sp|C3KCS0|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens SBW25] Length = 200 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 2/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR IPA++YG + + + +K+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILSKEIAKLFENEAAYSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +VI K Q P ++HADF++V G +T VPV F+ E+ +P +K+GG + Sbjct: 66 NVDGTKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVGED-AP-VKKGGVV 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + E+ + C ++P+ I VDL+ +IG IH+ D++ P+ Sbjct: 124 SHTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPK 165 >gi|56418580|ref|YP_145898.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus kaustophilus HTA426] gi|68053036|sp|Q5L3U8|RL25_GEOKA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56378422|dbj|BAD74330.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426] Length = 210 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + + +R G IPAI+YG + K I +S ++ K L + T++LTL Sbjct: 5 LEAKERADKKRSTLHRIRSQGGIPAILYGKKVENKMIFVSTAELEKALR-EGGRTSLLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G E V+ ++ Q DP+ L+HADF V + V + V VR + E +PG+K GG L Sbjct: 64 KVGGEEHSVLLRELQRDPLRGHLLHADFQAVDMSTEVDIDVEVRLVGE--APGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ P Sbjct: 122 QQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVKTDGKFEINHEPSEVIATILPP 181 >gi|315608437|ref|ZP_07883425.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] gi|315249897|gb|EFU29898.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] Length = 201 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 98/169 (57%), Gaps = 9/169 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALS----AKDISKRLYSK 58 KE ++ R +GK +++LLRK G +P +YG D KP+ALS ++ K +Y+ Sbjct: 2 KEINVTGQKRTDLGKKASKLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + + Sbjct: 62 HIY--VINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ Sbjct: 118 QGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF 166 >gi|170289080|ref|YP_001739318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] gi|226736373|sp|B1LBD7|RL25_THESQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170176583|gb|ACB09635.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] Length = 215 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + T I + Sbjct: 4 LEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQLI 63 Query: 68 ---DIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 D G + V K Q D VS+ ++H DF + ++G + ++VP++ + K G++ Sbjct: 64 IKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVGVE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V E+ + + +P I VD++ L +GD IH D++LPE + + + Sbjct: 122 KGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEAVV 181 Query: 183 TIVAP 187 +++ P Sbjct: 182 SVLVP 186 >gi|229542278|ref|ZP_04431338.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] gi|229326698|gb|EEN92373.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] Length = 209 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ S+R LR+NG IP ++YG ++ P+ ++ + K L +N +L+L Sbjct: 5 LEAKKREDKHHSSSRRLRRNGYIPGVVYGYQTENTPVYVNDTEFEK-LLRENGRNAVLSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ + Q DP+ + +IH DFL V+ + V VR + +S G+K GG L Sbjct: 64 NVNGTQRNVMVHEVQTDPLKNKIIHVDFLAVN--MSEDVDATVRVVLTEESAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 HE+S+ + IPD+ITVD+++L++ ++I + DIR Sbjct: 122 QQALHELSITAKPDEIPDAITVDVSNLQVNENITVADIR 160 >gi|126653272|ref|ZP_01725383.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589946|gb|EAZ84075.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 198 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN ++ +L Sbjct: 5 LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSI-QKNGQNSVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + V+V+ + Q + D + H DFL ++ + VP++ + +S G+ +GG L Sbjct: 64 DLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEADVPIKLVG--QSVGVSEGGIL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + TIVAP Sbjct: 122 MQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRNQTPVEVISEDDYLLVTIVAP 181 Query: 188 ISG 190 +S Sbjct: 182 VSA 184 >gi|159036391|ref|YP_001535644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] gi|157915226|gb|ABV96653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] Length = 234 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + + + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-RGGANQL 61 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +DI G +++ +PK Q DPV D H D L V G VTV VPV+ + E Sbjct: 62 FAIDISDGTQVL-ALPKAIQRDPVKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAAK---- 116 Query: 123 QGGKLNVVCHE-VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G L V H+ +S+ A +PD + + L+ G + D+RLP Sbjct: 117 --GTLIVHDHDTLSVTADATRVPDHLDATIEGLEAGTQVAAGDVRLP 161 >gi|78224043|ref|YP_385790.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter metallireducens GS-15] gi|109893365|sp|Q39RQ9|RL25_GEOMG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78195298|gb|ABB33065.1| LSU ribosomal protein L25P [Geobacter metallireducens GS-15] Length = 195 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 6/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M QK +S R+K GKG +R LR G++P ++YG +P +++ AK+++ + + Sbjct: 1 MQQK--TISIEQREKAGKGVSRKLRAVGRVPGVVYGKGIEPVAVSVDAKELAAAIVGEGG 58 Query: 61 MTTILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +++L G L VI D Q P+ I DF +++ V VHVPV I + Sbjct: 59 RNNLISLQGGGSLNGNTVIVADLQKAPLKGTFISVDFHKINMDEKVRVHVPVALIG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K+GG L +V H + L C + IP+ + VD+ +L IG +IH+ ++ L ++ Sbjct: 117 LGAKEGGMLELVMHSLDLECLPSQIPEHVEVDVTNLAIGHAIHVGELVLAAGVKALDDPK 176 Query: 179 ITIATI 184 TI ++ Sbjct: 177 ATIVSV 182 >gi|302560229|ref|ZP_07312571.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] gi|302477847|gb|EFL40940.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] Length = 199 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 8/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA RD+ GKG+AR +R++ ++P ++YG+ SDP+ + ++ L + N + Sbjct: 3 EVKISAATRDEFGKGAARRIRRDNKVPGVLYGHGSDPRHLTFPGHELLMALRTPNVL--- 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI GK IPK Q DP+ L H D L V G V V +PV+ E +PG Sbjct: 60 IALDIDGKSNELAIPKSVQRDPIKGFLEHVDLLLVKRGEKVQVEIPVQTEGE-LAPG--- 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G L V + + A +IP+S+TV + L+ G ++ +DI LP Sbjct: 116 GYLLEHVLSALPVEAEATHIPESVTVSVEGLEAGAAVLAKDITLP 160 >gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 6/184 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + +L +RD+ G GSAR LR+ G +P ++YG +P + L A +++ + N Sbjct: 2 ERVQLDVELRDETGTGSARRLREQGLVPGVVYGRNQEPINLKLDATELAD-VTGGN---A 57 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L + E V+ KD Q D ++D +H DF Q++ + V VP+ E + G+K+ Sbjct: 58 IIDLQVDGEEKTVMVKDVQKDVITDEYLHVDFHQIALDEPIVVEVPISL--EGVAEGVKE 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L +V + C IP + +++++L++G+S+H+ D+ E + + + T Sbjct: 116 GGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEGIELTTSGDEVVVT 175 Query: 184 IVAP 187 +VAP Sbjct: 176 VVAP 179 >gi|300770848|ref|ZP_07080725.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] gi|300762121|gb|EFK58940.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] Length = 198 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ + Sbjct: 2 KSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQTH-LSVSAADLKPVLYTPEVVFV 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L +D K I +D Q P++D++IH DFL++++ V+V++PV SPG+K Sbjct: 61 ELNIDGKKS--KAIVQDAQFHPLTDLVIHVDFLELNDDKEVSVNIPVTLTGT--SPGVKM 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL ++ + NN+P SI V + L++G S+ + ++L Sbjct: 117 GGKLVQKLRKLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL 160 >gi|209519642|ref|ZP_03268432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] gi|209499928|gb|EDZ99993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] Length = 206 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 95/173 (54%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 2 KVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFMNQESNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ ++ Sbjct: 122 VISHVLNEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVD 174 >gi|117929152|ref|YP_873703.1| 50S ribosomal protein L25/general stress protein Ctc [Acidothermus cellulolyticus 11B] gi|117649615|gb|ABK53717.1| LSU ribosomal protein L25P [Acidothermus cellulolyticus 11B] Length = 203 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R + GKG+AR +R+ G++PA++YG+ + P+ I+L ++ L + N + + Sbjct: 3 EVRIKAEPRTEFGKGAARRVRRAGKVPAVLYGHGTPPRHISLPGHELMLALKTPNVLLRL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+ + +PK Q + V+ L H D L V G V V VP+RF+ + G Sbjct: 63 EGLEGPDDGELALPKAVQRNVVTGFLEHVDLLLVRRGEQVEVDVPLRFVGTHAP-----G 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + A IP+ I V L+ L+IG SI++ D+RLP+ ++ ++ + + + Sbjct: 118 GVLEEHLVALPVRADATRIPEEIEVSLDGLEIGGSIYVRDVRLPDGVTAAAEPDEVVVHL 177 Query: 185 VAPISGS 191 + ++ S Sbjct: 178 LPALTAS 184 >gi|149182810|ref|ZP_01861272.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] gi|148849477|gb|EDL63665.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] Length = 217 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 3/164 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G IPA++YG ++ PIA+ + + K + I++L+I +V+ DYQ Sbjct: 21 LRHQGSIPAVVYGYKTENTPIAIDSIEFIKTMREAG-RNGIISLNIDGNKQNVVLSDYQQ 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + D +IHADFL V+ S + V + + E S G+K GG L H+VS+ ++I Sbjct: 80 DHIKDAVIHADFLAVNMSSEMDADVRIELVGE--SAGVKDGGVLQQPLHDVSVTAKPSDI 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 PDS+ VD++ L++G++I + DI+ + ++ TIA+++AP Sbjct: 138 PDSVQVDISGLQVGETITVGDIKGNYSFTINTEDERTIASVLAP 181 >gi|295675403|ref|YP_003603927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] gi|295435246|gb|ADG14416.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] Length = 205 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 95/173 (54%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 2 KVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFLNQETNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ ++ Sbjct: 122 VISHVINEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVD 174 >gi|332527357|ref|ZP_08403413.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] gi|332111766|gb|EGJ11746.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] Length = 214 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 4/184 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G G++R LR ++P I+YG +PK I L + L + F ++IL Sbjct: 2 KFTAYERSVQGTGASRRLRNAAKVPGIVYG-AGEPKMIELDHNALFFALKKEAFHSSILE 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ ++ V+ +D+Q+ I++H DF +V E + + VP+ F E SP +K Sbjct: 61 MELAGKVEKVLLRDFQMHAWKPIVMHVDFQRVDETTRLRKKVPLHFEGEENSPAVKTDKC 120 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIAT 183 L + V E+ + C A+ +P+ +T+DL+ L S+H+ D++LP K LN I Sbjct: 121 LVSHVATEIEIECLASQLPEFVTIDLSGLVKNQSLHLNDLKLPAGIKAVRHGTLNPAIVA 180 Query: 184 IVAP 187 + P Sbjct: 181 VTMP 184 >gi|319779110|ref|YP_004130023.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] gi|317109134|gb|ADU91880.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] Length = 212 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR+ G++P I+YG +P I L +I L + F +++L Sbjct: 2 KFTAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + V+ + Q ++H DFL+V G +T VP+ FIN+ SP +K G Sbjct: 62 MDLDGKTETVLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFINDEVSPAVKLHGN 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNITIA 182 L + + E+ + C ++P I VDL++L+ +H+ I+ P E T + ++ +A Sbjct: 122 LISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIKPPAGVEFTGHNPEEDMVLA 181 Query: 183 TIVAP 187 + +P Sbjct: 182 SASSP 186 >gi|21221562|ref|NP_627341.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces coelicolor A3(2)] gi|256787246|ref|ZP_05525677.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces lividans TK24] gi|289771145|ref|ZP_06530523.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] gi|71153667|sp|Q9K3T9|RL25_STRCO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|8894757|emb|CAB95917.1| ribosomal L25p family protein [Streptomyces coelicolor A3(2)] gi|289701344|gb|EFD68773.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] Length = 198 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 8/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N + Sbjct: 3 EVKLTAETRTEFGKGAARRIRRDNKVPGVLYGHGSDPLHLTLPGHELLLALRTSNVL--- 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI GK IPK Q DP+ L H D V G TV+V +PV+ E +PG Sbjct: 60 IALDIDGKTNELAIPKSVQRDPIKGFLEHVDLQLVKRGETVSVEIPVQAEGE-LAPG--- 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G L V + + A +IP +TV + L+ G SIH +DI LP Sbjct: 116 GFLLEYVLDALPVEAEATHIPQQVTVSVAGLEAGASIHAKDIALP 160 >gi|238028669|ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia glumae BGR1] gi|237877863|gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1] Length = 204 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERTQQGTGASRRLRNTGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 62 LEVAGKSQSVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSSA 121 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NIT 180 VV H E+ + C + +P+ + VDL+ L+ G S+H +DI LP + ++ + N Sbjct: 122 --VVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNGVALVAHIDAENPV 179 Query: 181 IATIVAP 187 IAT P Sbjct: 180 IATATIP 186 >gi|319789278|ref|YP_004150911.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] gi|317113780|gb|ADU96270.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] Length = 199 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 10/184 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMT 62 K ++ A R+K GK A+ LR+ G +PA+IYG + PIA+ AK++ + + Sbjct: 2 KVVEVKATRREKTGKEVAKKLRREGLLPAVIYGGGRPEATPIAIPAKEVRRIKHHHG--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GI 121 ++ +D+G E I KD Q + + D+ IH DF +V+ G T+ V V + F+ +P G+ Sbjct: 59 -LIKVDLGDEERMCILKDIQYNWLGDVPIHVDFQEVTFGETLEVVVELEFVG---TPVGV 114 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++GG L ++ EV++ IP+ I VD+++L GD++H++D+ LPE + + T Sbjct: 115 SEEGGVLEILKREVAIETLPREIPEKIVVDISNLHAGDALHVKDLPLPEGAKFVDSPDET 174 Query: 181 IATI 184 + + Sbjct: 175 VVVV 178 >gi|163786662|ref|ZP_02181110.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] gi|159878522|gb|EDP72578.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] Length = 220 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI--SKRLYSKNFM 61 K ++ R+ VGK S + LR GQ+P +IYG KP+ SA ++ SK +Y+ + Sbjct: 2 KSITINGSQRESVGKKSTKALRNAGQVPCVIYGG---DKPLHFSAPELAFSKLVYTASAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ LD G E + I +D Q PV+D +IH DF Q+ E +T+++PV+ + +K G+ Sbjct: 59 TVVIALDNG-EKYNAIMQDIQFHPVTDRIIHIDFYQIFENKAITMNIPVQVVGTSK--GV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 GG L ++ + + +PD I +D+ LKIGD +++ ++ Sbjct: 116 LNGGNLRRPYRKLKVKAIPSKLPDFIEIDITPLKIGDKVYISEL 159 >gi|196250765|ref|ZP_03149452.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] gi|196209715|gb|EDY04487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] Length = 210 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + R +R G IPA++YG D K I++SA D+ K L + +++TL Sbjct: 5 LGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLVTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E V+ ++ Q DP+ L+HADF V + V V V VR + E +PG+K GG L Sbjct: 64 KVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSTEVDVDVEVRLVGE--APGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ P Sbjct: 122 QQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATILPP 181 >gi|148270294|ref|YP_001244754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga petrophila RKU-1] gi|166223728|sp|A5ILV5|RL25_THEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|147735838|gb|ABQ47178.1| LSU ribosomal protein L25P [Thermotoga petrophila RKU-1] Length = 214 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R+ GK AR LR+NG++PA++YG ++P P+ + + K ++ + T I + Sbjct: 4 LEARVREVKGKREARRLRRNGEVPAVVYGPATEPIPVKIKRSVLEKVFHTISEATPIQLI 63 Query: 68 ---DIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 D G + V K Q D VS+ ++H DF + ++G + ++VP++ + K G++ Sbjct: 64 IKDDQGNTVSEKTVFLKMIQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVGVE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V E+ + +N+P I VD++ L +GD I+ D++LPE + + Sbjct: 122 KGGFLEVFHEEIPVETDPDNVPQEIEVDVSSLDLGDVIYARDLKLPEGVKCLLGDEEVVV 181 Query: 183 TIVAP 187 +++ P Sbjct: 182 SVLVP 186 >gi|294629795|ref|ZP_06708355.1| 50S ribosomal protein L25 [Streptomyces sp. e14] gi|292833128|gb|EFF91477.1| 50S ribosomal protein L25 [Streptomyces sp. e14] Length = 198 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 8/169 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N + Sbjct: 3 EVKISAATRSEFGKGAARRIRRDNKVPGVLYGHGTDPLHLTLPGHELLLALRTPNVL--- 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++LDI GK IPK Q DP+ L H D L V G V V +PV E +PG Sbjct: 60 ISLDIDGKSNELAIPKSVQRDPLKGFLEHVDLLLVKRGEKVNVEIPVVAEGE-LAPG--- 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 G L V + + A +IP+ +TV + L+ G SIH +DI LP S Sbjct: 116 GNLLEHVLSSLPVEAEATHIPEQVTVSVEGLEAGASIHAKDITLPSGVS 164 >gi|194334300|ref|YP_002016160.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris aestuarii DSM 271] gi|226736350|sp|B4S8X6|RL25_PROA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194312118|gb|ACF46513.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prosthecochloris aestuarii DSM 271] Length = 201 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 3/156 (1%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 AV K A+ LR G++PA++Y N D + I ++ + K ++S L Sbjct: 7 AVEPRTCSKNEAKTLRTEGKVPAVVYHNGEDNQHICVNELALEKLVHSPESHIINLEFPD 66 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 GK +I KD Q DPV+D +IHADF S G + + VPV F K PGI+ GG+L Sbjct: 67 GKNRRSLI-KDVQFDPVTDKVIHADFQFFSAGEVLEMEVPVTFTG--KGPGIEAGGRLQA 123 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + H +++ ++IPD IT+D++ +++G+++H+++I Sbjct: 124 LVHALTVKGVPSSIPDHITLDISAMELGETMHIKEI 159 >gi|138893724|ref|YP_001124177.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus thermodenitrificans NG80-2] gi|166223684|sp|A4IJC8|RL25_GEOTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134265237|gb|ABO65432.1| General stress protein [Geobacillus thermodenitrificans NG80-2] Length = 210 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + R +R G IPA++YG D K I++SA D+ K L + +++TL Sbjct: 5 LGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLVTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E V+ ++ Q DP+ L+HADF V + V V V VR + E +PG+K GG L Sbjct: 64 KVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSAEVDVDVEVRLVGE--APGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ P Sbjct: 122 QQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATILPP 181 >gi|15612630|ref|NP_240933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus halodurans C-125] gi|68053238|sp|Q9KGJ4|RL25_BACHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|10172679|dbj|BAB03786.1| 50S ribosomal protein L25 [Bacillus halodurans C-125] Length = 215 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 100/174 (57%), Gaps = 9/174 (5%) Query: 18 KGS-ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILTLDIGKELV 74 +GS R +RK G +PA++YGN + +PI++ A D K R +N +++L++ K Sbjct: 14 RGSVTRKIRKQGYVPAVVYGNKTKSQPISVEAVDFLKTVREVGRN---GLISLEVEKGTK 70 Query: 75 H-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE 133 H V+ D Q+DP+ +H DF +V S + +VPVR E + G+ +GG L+ + +E Sbjct: 71 HQVMVHDLQMDPLKGDYLHIDFFEVDMSSEIEANVPVRLTGEAR--GVSEGGVLSQLMYE 128 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++ +IP+ IT+D++ L IGDSI + D+R +++ T+ T+ P Sbjct: 129 ITVRSLPADIPEEITLDVSSLAIGDSIQIRDVRGNVPVQVVNEDEETVVTVQPP 182 >gi|239817313|ref|YP_002946223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] gi|259646698|sp|C5CYZ6|RL25_VARPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239803890|gb|ACS20957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] Length = 224 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 7/187 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R K G G++R LR +G+ P I+YG P+ I L + L + F ++IL Sbjct: 2 KFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++G V+ +D Q P ++ H DF +V + + + VP+ + E +S +K Sbjct: 62 MELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH- 120 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITI 181 N+V H E+ + C ++P+ I VDL+ LK ++H+ DI+LP+ K S +LN I Sbjct: 121 -NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVI 179 Query: 182 ATIVAPI 188 + V P+ Sbjct: 180 VSAVPPL 186 >gi|149925764|ref|ZP_01914028.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] gi|149825881|gb|EDM85089.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] Length = 195 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR+ GQ+P I+YG + + +++ + L + F ++IL Sbjct: 2 KVVATSRTEQGSGASRRLRRAGQVPGIVYGANQEAQAVSIEHNPLWHALQKEKFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+I + V+ +DYQ P L+H DF ++ + ++VP+ F +SP +K G Sbjct: 62 LEIDGKSQQVLLRDYQSHPYKPQLLHIDFQRIDGNQKIHMNVPLHFSGHLESPAVKLYAG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTS--SMSQLNITIA 182 ++ V +++ + C ++P+ I VD + L + SIH+ +++ PE S + Q ++++ Sbjct: 122 QVTFVANQIEIECLPKDLPEFIAVDCSVLDVTKRSIHVTELQFPEGVSIPNHGQQDLSVV 181 Query: 183 TI 184 T+ Sbjct: 182 TV 183 >gi|197119140|ref|YP_002139567.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter bemidjiensis Bem] gi|226736325|sp|B5EHX2|RL25_GEOBB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|197088500|gb|ACH39771.1| ribosomal protein L25 [Geobacter bemidjiensis Bem] Length = 197 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R++ GKG R LR G++PA++YG P I+L K++S+ + + ILTL Sbjct: 6 LKAELREQTGKGICRRLRAAGRVPAVVYGKGIAPVSISLGQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + EL VI D D + ++ H D +++ V VHV + + G+K GG Sbjct: 66 ECAGELNGASVIVADLLRDSLKNVPRHVDLHKINLADKVKVHVKLNLV--GTPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HEV + C +IP I VD+ +L IG S+H+ I P T+ +S ++ +I+ Sbjct: 124 FLDFAMHEVEVECLPVHIPAHINVDVAELLIGHSVHVGQIVAPIGTAILSDPKASVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|94264423|ref|ZP_01288213.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93455180|gb|EAT05398.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 97/168 (57%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + + Sbjct: 3 QVDITANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRNAV 62 Query: 65 LTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ + HVI ++ Q DPV D ++HADF +S ++T VP+R+ + K+ G Sbjct: 63 INLEVNDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRY--KGKARG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP Sbjct: 121 VELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALP 168 >gi|115352914|ref|YP_774753.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria AMMD] gi|170701088|ref|ZP_02892064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|172061762|ref|YP_001809414.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria MC40-6] gi|122322183|sp|Q0BBQ4|RL25_BURCM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736288|sp|B1YN53|RL25_BURA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115282902|gb|ABI88419.1| LSU ribosomal protein L25P [Burkholderia ambifaria AMMD] gi|170133989|gb|EDT02341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|171994279|gb|ACB65198.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MC40-6] Length = 202 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ ++ Sbjct: 122 VVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHID 174 >gi|328908364|gb|EGG28123.1| ribosomal L25P family protein [Propionibacterium sp. P08] Length = 200 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G+E + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ + +D+ L+ G +I++ D++LPE TS + AT+V Sbjct: 123 SNEIEVQADLL----NIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATVVF 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|311743169|ref|ZP_07716977.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] gi|311313849|gb|EFQ83758.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] Length = 228 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 14/171 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A R + GKG+AR +R+ Q+PA++YG+ SDP + L D+ L + N + +I Sbjct: 9 EIKIAAQTRTEFGKGAARRIRRADQVPAVLYGHGSDPVHVTLPGHDLMLALKNSNALLSI 68 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LD G L VIPK Q DP+ + HAD L V +G VTV +P+ + Q Sbjct: 69 -DLDSGSHL--VIPKQVQRDPLKGFIEHADLLIVKKGEKVTVDIPLTLVG--------QA 117 Query: 125 GKLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 G +V E VS+ A +IP+ I V + L G+ I +D+ LP+ ++ Sbjct: 118 GPDTLVVTENSTVSIEAEATHIPNEIEVSIEGLAAGEQILAKDLVLPKGST 168 >gi|170691505|ref|ZP_02882670.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] gi|170143710|gb|EDT11873.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] Length = 205 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 95/173 (54%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++G + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQESNPAVKLASA 121 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ ++ Sbjct: 122 VISHVINEIEVECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVD 174 >gi|319940809|ref|ZP_08015148.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] gi|319805691|gb|EFW02472.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] Length = 214 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 5/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR+ ++P IIYG + PI L I L + F +ILT Sbjct: 2 KVIATTRTTQGTGASRRLRRADKLPGIIYGGKNPATPIELEHNPIFFALRKEKFHASILT 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ GKE + V+ +D+Q+ P ++H DF +++ VT+ VP+ F E SP +K Sbjct: 62 MELDGKEEL-VVLRDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLHFSGEELSPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ V + C ++P+ I VDL+ ++ G ++H D+ +PE ++ + IA++ Sbjct: 121 CIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEGVKMVT--DSVIASV 178 Query: 185 VAPIS 189 + P+ Sbjct: 179 IQPVE 183 >gi|303256347|ref|ZP_07342363.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|330999042|ref|ZP_08322767.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] gi|302861076|gb|EFL84151.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|329575784|gb|EGG57310.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] Length = 217 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV R G G++R LR+ ++P I+YG PI L +I L + F +IL Sbjct: 2 KFTAVTRKAQGTGASRRLRRAEKLPGIVYGGKVAATPIELDHNEIFHALRKEKFHASILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 + + + V+ + +Q+ P ++H DF ++S + ++VP+ F+ E KSP I Sbjct: 62 MVLDGKSERVLLRSFQMHPYKPQVLHIDFQRISADEQIRMNVPLHFVGEEKSPAITIDKT 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +N E+ + C + +P+ ITVDL+ L + +H+ D+ LPE Sbjct: 122 NVNHALTELLVSCLPDQLPEFITVDLSGLTVDKPVHVSDLVLPE 165 >gi|307728381|ref|YP_003905605.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] gi|307582916|gb|ADN56314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] Length = 205 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQETNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NITIA 182 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ + N +A Sbjct: 122 VISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVEAENPVVA 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATIP 186 >gi|254251379|ref|ZP_04944697.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] gi|124893988|gb|EAY67868.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] Length = 206 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 ESHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 SILDLEVAGKSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAETSPAVK 121 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP + ++ + N Sbjct: 122 LSSAVISHVATEIEVECLPAALPEFLEVDLSKIEAGQSVHAKDIALPNGVALVAHIDAEN 181 Query: 179 ITIATIVAP 187 IA+ P Sbjct: 182 PVIASATVP 190 >gi|171320165|ref|ZP_02909227.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] gi|171094579|gb|EDT39631.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] Length = 202 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + + V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ ++ Sbjct: 122 IVSHVATEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHID 174 >gi|94265983|ref|ZP_01289706.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93453449|gb|EAT03865.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 97/168 (57%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + + Sbjct: 3 QVDIAANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRNAV 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ + HVI ++ Q DPV D ++HADF +S ++T VP+R+ + K+ G Sbjct: 63 INLEVKDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRY--KGKARG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP Sbjct: 121 VELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALP 168 >gi|107023736|ref|YP_622063.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia AU 1054] gi|116690823|ref|YP_836446.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia HI2424] gi|170734148|ref|YP_001766095.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia MC0-3] gi|123244641|sp|Q1BTG5|RL25_BURCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223665|sp|A0KAM6|RL25_BURCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736289|sp|B1JYQ0|RL25_BURCC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|105893925|gb|ABF77090.1| LSU ribosomal protein L25P [Burkholderia cenocepacia AU 1054] gi|116648912|gb|ABK09553.1| LSU ribosomal protein L25P [Burkholderia cenocepacia HI2424] gi|169817390|gb|ACA91973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia cenocepacia MC0-3] Length = 201 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NITIA 182 + + V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ + N IA Sbjct: 122 IVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVIA 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATVP 186 >gi|121607939|ref|YP_995746.1| 50S ribosomal protein L25/general stress protein Ctc [Verminephrobacter eiseniae EF01-2] gi|166223729|sp|A1WGH1|RL25_VEREI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121552579|gb|ABM56728.1| LSU ribosomal protein L25P [Verminephrobacter eiseniae EF01-2] Length = 235 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI 69 A R K G G++R LR +G+ P I+YG ++P+ I L + L + F +++L +++ Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQMIELDHNALWHALKKEAFHSSVLDMEV 64 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLN 128 + V+ +D Q P ++H DF +V + + + + VP+ + +S +K +N Sbjct: 65 AGKTDKVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKVPLHYSGSEESNAVKVDKCMVN 124 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ +E+ + C +++P+ I VDL+ L+ G S+H++DI+LP Sbjct: 125 LIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPR 165 >gi|223936333|ref|ZP_03628245.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] gi|223894851|gb|EEF61300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] Length = 245 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 104/189 (55%), Gaps = 6/189 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---SKNF 60 K L+A R +G A+ LR +G+IPA+IYG + + +++KDI ++ S+N Sbjct: 2 KSVALNAFPRVMARRGGAKKLRDSGRIPAVIYGRQQQAQNLEVNSKDIENLIHHSVSENL 61 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + D + + ++ Q P++ ++H DF +V+E VT+ VPV E + G Sbjct: 62 LVDLAVKDDSRPKRLALVQEVQHHPLNGKMLHVDFHEVAENERVTIMVPVEATGE--AVG 119 Query: 121 IKQGGK-LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K GG L V ++ + ++P+ I VD+++L+IG +IH+ DI+ PE + +I Sbjct: 120 VKTGGGVLEHVLFKIKVRALPKDLPEVIAVDVSNLEIGQAIHIGDIKAPEGVEVLGDKHI 179 Query: 180 TIATIVAPI 188 ++ + AP+ Sbjct: 180 SVIAVAAPL 188 >gi|258591287|emb|CBE67584.1| 50S ribosomal protein L25 (General stress protein CTC) [NC10 bacterium 'Dutch sediment'] Length = 220 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 6/166 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 +E +L +R +VGKG+A+ LR+ IPA++YG S P + ++ ++ K L S Sbjct: 2 EELRLKGQVRTQVGKGAAKKLRRQRLIPAVVYGGTSGPTAVTINPFEMMKLLGSGAGENV 61 Query: 64 ILTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L + E VI K Q DPV +HADFL+VS + V +PVR + E + G Sbjct: 62 LISLAMDGENEQSRTVILKALQRDPVRGGPLHADFLEVSMQRKIKVQIPVRLVGE--AIG 119 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 +K +GG L EVS+ C IP I VD++ L +G IH+ ++ Sbjct: 120 VKLKGGLLEQHLREVSVECLPGAIPSHIQVDISHLDLGHGIHVREL 165 >gi|88856042|ref|ZP_01130703.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] gi|88814610|gb|EAR24471.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] Length = 208 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 8/177 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD GKG+AR LR G+IPA+IYG+ +DP +AL +I L N IL LDI + Sbjct: 14 RDSFGKGAARKLRALGKIPAVIYGHGTDPIHVALPGHEIGLILRKSN---QILDLDINGK 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + KD Q DPV I+ H D + + +G V V VP+ + E+ +PG N+ Sbjct: 71 SQLALVKDVQKDPVRQIIEHIDLVVIRKGEKVIVDVPIHLVGES-APGTIA----NLDAP 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VS+ A +IP+ TVD+ + GD I+ +D+ L E + +S + + + P S Sbjct: 126 TVSVEAEATHIPEYFTVDIEGREEGDHIYAKDVTLVEGSELLSDPELLVVGVSTPRS 182 >gi|254247176|ref|ZP_04940497.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] gi|124871952|gb|EAY63668.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] Length = 205 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 ENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 62 SILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVK 121 Query: 123 QGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 + + V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ + N Sbjct: 122 LSSAIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAEN 181 Query: 179 ITIATIVAP 187 IA+ P Sbjct: 182 PVIASATVP 190 >gi|323524671|ref|YP_004226824.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] gi|323381673|gb|ADX53764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] Length = 205 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP Sbjct: 122 VISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLP 164 >gi|218508780|ref|ZP_03506658.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Brasil 5] Length = 116 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 64/89 (71%) Query: 102 STVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + V+V +PV FINE KSPG+K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH Sbjct: 15 TQVSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIH 74 Query: 162 MEDIRLPEKTSSMSQLNITIATIVAPISG 190 + ++ LP+ + + + TIATIVAP +G Sbjct: 75 ISEVTLPKGVTPVIDRDFTIATIVAPAAG 103 >gi|84683373|ref|ZP_01011276.1| Ribosomal protein L25 [Maritimibacter alkaliphilus HTCC2654] gi|84668116|gb|EAQ14583.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2654] Length = 180 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIH 92 +YG DP PI ++ + K+L F++T+ L + G++ V VI ++ Q D V D+ H Sbjct: 1 MYGGDVDPLPININFNMLLKKLKDGRFLSTLFNLKVEGQDDVRVICRNVQRDVVKDLPTH 60 Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DFL++ S + + +PV FINE K+PG+K+GG + V EV L A +IP+ I VDL Sbjct: 61 VDFLRLRRTSRINLFIPVEFINEEKAPGVKKGGVVVHVRPEVELDVVAGDIPEKIVVDLA 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 IGD IH+ D+ LP+ + + IA I AP Sbjct: 121 GRDIGDVIHISDVELPQGAKPTVERDFVIANISAP 155 >gi|206559196|ref|YP_002229956.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia J2315] gi|198035233|emb|CAR51107.1| ribosomal L25p family protein [Burkholderia cenocepacia J2315] Length = 205 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 ENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 SILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVK 121 Query: 123 QGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 + + V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ + ++ + N Sbjct: 122 LSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLVAHVDAEN 181 Query: 179 ITIATIVAP 187 +A+ P Sbjct: 182 PVVASATVP 190 >gi|221199984|ref|ZP_03573027.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] gi|221206861|ref|ZP_03579873.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221211192|ref|ZP_03584171.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221168553|gb|EEE01021.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221173516|gb|EEE05951.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221180223|gb|EEE12627.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] Length = 205 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 ENHMKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 SILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVK 121 Query: 123 QGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLN 178 + + V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ T+ + N Sbjct: 122 LSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAEN 181 Query: 179 ITIATIVAP 187 IA+ P Sbjct: 182 PVIASATIP 190 >gi|302551981|ref|ZP_07304323.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] gi|302469599|gb|EFL32692.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] Length = 198 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 8/169 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR +R+ ++P ++YG+ SDP + L D+ L + N + Sbjct: 3 EVKISAATRTEFGKGAARRIRREDKVPGVLYGHGSDPLHVTLPGHDLLMALRTPNVL--- 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI GK IPK Q DP+ L H D L V G V V + V E +PG Sbjct: 60 IALDIDGKTKELAIPKAVQRDPLKGFLEHVDLLLVKRGERVNVDIYVHTEGE-LAPG--- 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 G L V + + + A +IP+S+TV + L GDSI +DI LP+ T+ Sbjct: 116 GFLLEHVLNALPVEAEATHIPESVTVSVEGLSAGDSILAKDITLPKGTT 164 >gi|134296999|ref|YP_001120734.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia vietnamiensis G4] gi|166223669|sp|A4JHZ6|RL25_BURVG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134140156|gb|ABO55899.1| LSU ribosomal protein L25P [Burkholderia vietnamiensis G4] Length = 201 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F +IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHASILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEIAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NITIA 182 + + V E+ + C + +P+ + VDL+ ++ G S+H +DI LP + ++ + N +A Sbjct: 122 IVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNGVALVAHVDAENPVVA 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATVP 186 >gi|171464201|ref|YP_001798314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226736348|sp|B1XS65|RL25_POLNS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171193739|gb|ACB44700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 214 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 1/165 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G ++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTSASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+IG + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 61 DLEIGGKTQKVLLRDYQMHPFKPLVLHIDFQRVSATKKVHMRVPLHFTNADTSAAVKLQG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ + E+ + ++P+ I VDL +++G IH +DI LP+ Sbjct: 121 AVISHIATELEVSYLPADLPEFIEVDLAKIEVGHGIHAKDIALPK 165 >gi|161523692|ref|YP_001578704.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|189351544|ref|YP_001947172.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|226736290|sp|A9AEY7|RL25_BURM1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160341121|gb|ABX14207.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia multivorans ATCC 17616] gi|189335566|dbj|BAG44636.1| large subunit ribosomal protein L25 [Burkholderia multivorans ATCC 17616] Length = 201 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 + + V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ T+ + N IA Sbjct: 122 IVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVIA 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATIP 186 >gi|253700098|ref|YP_003021287.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sp. M21] gi|259646688|sp|C6E500|RL25_GEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|251774948|gb|ACT17529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M21] Length = 197 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+K GKG R LR G++PA++YG P I+L K++S+ + + ILTL Sbjct: 6 LKVELREKTGKGICRRLRAAGRVPAVVYGKGITPVSISLGQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + EL +VI D D + + H D +++ V VHV + + G+K GG Sbjct: 66 ECAGELNGANVIVADLLRDSLRNQPRHVDLHKINLADKVKVHVKLNLV--GTPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HE+ + C +IP I VD+ +L IG S+H+ +I P T+ +S + +I+ Sbjct: 124 FLDFAMHEIEVECLPVHIPAHINVDVTELLIGHSVHVGEIAAPIGTAILSDPKAAVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] Length = 237 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 2/165 (1%) Query: 7 KLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R G G++R LR+ ++PAI+YG P PI+L + + L ++ F + IL Sbjct: 9 ELTAQTRKMFGSGASRRLRRLENRVPAILYGASEPPLPISLEHNQVLRALENEAFYSHIL 68 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 T++I + KD Q ++H D +VS +T+ VP+ F E ++PG+K +G Sbjct: 69 TINIEGTEQKAVLKDLQRHAYKPYILHMDLQRVSAKEKITMSVPLHFKGETEAPGVKDEG 128 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G L + V + C ++P+ + VD++ L++ +SI + + LPE Sbjct: 129 GVLTKLLTSVEVRCLPVSLPEYLEVDVSKLRLDESISLSQLHLPE 173 >gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter lovleyi SZ] gi|226736326|sp|B3E6G0|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter lovleyi SZ] Length = 194 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 6/170 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q + K+ R GKG +R LR G+IP I+YG +P I+L K ++ + + Sbjct: 1 MQQTQMKIET--RSSTGKGISRKLRAAGRIPGIVYGRGMEPVAISLEPKALNAAIAGEGG 58 Query: 61 MTTILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++TL+ G +L V VI + Q D + H D +V+ V V+VPV + + Sbjct: 59 LNNLITLEGGGDLDKVVVIVAEIQRDALKRTPEHVDLHRVNMSEKVRVNVPVSLVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G+K+GG L+ H + + C IP+ I +++ DLKIG +IH+ +I P Sbjct: 117 AGVKEGGLLDFAHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFP 166 >gi|126454225|ref|YP_001064867.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1106a] gi|134279781|ref|ZP_01766493.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217420309|ref|ZP_03451815.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|226199547|ref|ZP_03795104.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242314590|ref|ZP_04813606.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|251767336|ref|ZP_02266847.2| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] gi|68053086|sp|Q63XL9|RL25_BURPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893348|sp|Q3JW87|RL25_BURP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52208574|emb|CAH34510.1| ribosomal L25p family protein [Burkholderia pseudomallei K96243] gi|126227867|gb|ABN91407.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a] gi|134248981|gb|EBA49063.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217397613|gb|EEC37629.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|225928428|gb|EEH24458.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242137829|gb|EES24231.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|243063117|gb|EES45303.1| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] Length = 208 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 121 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQ 176 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + Sbjct: 122 LSSA--VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDA 179 Query: 177 LNITIATIVAP 187 N IA+ P Sbjct: 180 ENPVIASATIP 190 >gi|76578961|gb|ABA48436.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei 1710b] Length = 223 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 17 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 76 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 77 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 136 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQ 176 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + Sbjct: 137 LSSA--VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDA 194 Query: 177 LNITIATIVAP 187 N IA+ P Sbjct: 195 ENPVIASATIP 205 >gi|254262121|ref|ZP_04953175.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] gi|254220810|gb|EET10194.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] Length = 208 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 121 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQ 176 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + Sbjct: 122 LSSA--VVSHVVTEIEIECLPADLPEFLEVDLSXIEAGQSLHAKDIALPNGVALTAHVDA 179 Query: 177 LNITIATIVAP 187 N IA+ P Sbjct: 180 ENPVIASATIP 190 >gi|257094305|ref|YP_003167946.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046829|gb|ACV36017.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 203 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R G G++R LR+ ++PAI+YG + P I L +I L + F ++LT Sbjct: 4 ELHARKRTLQGSGASRRLRREKRVPAIVYGGSAAPLLIDLDHNEILLNLRKEAFHASVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ V+ +D Q P +++H DF +V + VP+ F+N + +PG+K GG Sbjct: 64 LNVDGATQSVVLRDSQRHPWKPLVLHCDFQRVDTTHAIHQRVPLHFVNADIAPGVKIGGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + +++ + C ++P I VDL +L+ G ++H+ ++ P Sbjct: 124 NVAHILNDIEVTCLPQDLPAYIEVDLKNLESGHALHVSELVFP 166 >gi|303238070|ref|ZP_07324611.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] gi|302481766|gb|EFL44820.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] Length = 200 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 101/167 (60%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALS----AKDISKRLYSK 58 K+ ++S R+ +GK +++ LRK G IP +YG + D KP+AL+ ++ K +Y+ Sbjct: 2 KQIQISGKKREIIGKKASKELRKEGLIPCNLYGEVKEDGKPVALAFASPMAELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + LT+D K L + K+ Q P +D ++H DF +V+E + + VPV+ + + Sbjct: 62 HIYVVELTIDGEKRLA--VMKEIQFHPTTDAVLHIDFYEVNETKPIVMGVPVK--HTGLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG++N+ ++++ P ++IP+++ +D+ +L+IG SI + D+ Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYSHIPETLEIDVTNLRIGKSIKVGDL 164 >gi|269792684|ref|YP_003317588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100319|gb|ACZ19306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 213 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 1/176 (0%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 R+ +GKG+ R LR G +PA++YG KP ++ +++ K + + TT++ L++ Sbjct: 12 REGLGKGACRKLRSEGMVPAVVYGPGYQSGKPGFVNEREVYKVCGTDTWETTVIELNVDG 71 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 + ++ Q P++ ++H DFLQ+ + V V VPV +N+ G+KQGG L Sbjct: 72 NPEMALIREIQRHPLTRDIVHLDFLQMKKDHKVRVQVPVHLMNKGICVGVKQGGVLEQHH 131 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+++ +IP+ + +D+ L++G + + D+ L ++ + I + +P Sbjct: 132 HEITVEVFPEDIPERVDIDVKGLELGAEVRISDLNLGDRIHWALPTDTVIVAVRSP 187 >gi|325524744|gb|EGD02726.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. TJI49] Length = 201 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEISPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 + + V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ T+ + N +A Sbjct: 122 IVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLTAHVDAENPVVA 181 Query: 183 TIVAP 187 + P Sbjct: 182 SATVP 186 >gi|296161527|ref|ZP_06844332.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] gi|295888171|gb|EFG67984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] Length = 205 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQESNPAVKLASA 121 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP Sbjct: 122 VISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLP 164 >gi|187922591|ref|YP_001894233.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phytofirmans PsJN] gi|226736292|sp|B2SXG4|RL25_BURPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187713785|gb|ACD15009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phytofirmans PsJN] Length = 206 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQESNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP S ++ + Sbjct: 122 VISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVSLVAHVE 174 >gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] Length = 204 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL- 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 2 KFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASILQ 61 Query: 66 -TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+ + V+ + Q ++H DF +V + VP FIN SP +K G Sbjct: 62 MALEGAAKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPFHFINAEVSPAVKLG 121 Query: 125 GK-LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G ++ V E+ + C +P I VDL DL G S+H+ DI+LP+ Sbjct: 122 GAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLADIKLPK 167 >gi|302036153|ref|YP_003796475.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] gi|300604217|emb|CBK40549.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] Length = 255 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 10/188 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK--DISKRLYSKNFMTTIL 65 L+ R+ GKG AR LR+ G++PA++YG + + LS K ++ K L S+ T ++ Sbjct: 5 LTVESREGGGKGPARQLRRAGRVPAVLYGQG---ECLLLSVKPDELVKILRSQAGSTALI 61 Query: 66 TLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L I K + +D+Q+DP++ ++HADF +V+ + V VPV + G+ Sbjct: 62 SLTINGAKSKAKRTALLRDFQVDPIAGSVLHADFFEVAMDKPIRVKVPVHLTG-GQPIGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L+ V ++ + C + +PD I VD + L+I IH++DI E + L + Sbjct: 121 KEGGVLHHVLRQLHIECLPSVLPDFIEVDASQLQINQGIHLKDIPKTEGLRFLDDLEHMV 180 Query: 182 ATIVAPIS 189 ++ AP++ Sbjct: 181 VSVAAPMT 188 >gi|299536725|ref|ZP_07050035.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727839|gb|EFI68404.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 198 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R+ + + LRK G IPA+IYG D PI+++AKD K + KN ++ +L Sbjct: 5 LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKVDSTPISIAAKDFKKSI-QKNGQNSVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + V+ + + Q + D + H DFL ++ + VP++ + + S G+ +GG L Sbjct: 64 ELEGKKVNAVVSEVQQCSLKDEVNHIDFLAINMAEELEADVPIKLLGQ--SVGVSEGGIL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E+ + +P+SI VD++ LKIG+S+ + DIR +S+ + + TIVAP Sbjct: 122 MQPNLELKVKVKPTELPESIDVDISSLKIGESLTVADIRDATPVEIISEDDYMLVTIVAP 181 Query: 188 IS 189 +S Sbjct: 182 VS 183 >gi|119961664|ref|YP_947125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] gi|119948523|gb|ABM07434.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] Length = 191 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 8/172 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG AR R GQIPA+IYG+ ++P I L + + + N + Sbjct: 3 EQKLTAELRTEFGKGFARRARMAGQIPAVIYGHGAEPIHINLPGRATTLAVRVSN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +D+ E + KD Q DPV I+ H D V G VTV + + E + G Sbjct: 60 LAIDVDGEQHLTLVKDIQRDPVKQIIEHVDLQTVKAGEKVTVDIAIHVSGE-----VAPG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 ++ VSL A ++P ++ V ++ LK G+SIH D+ LP+ ++ +++ Sbjct: 115 AVASLEATTVSLEAEATHVPTAVEVTIDGLKAGESIHASDLVLPKGSTLLTE 166 >gi|124385169|ref|YP_001027484.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10229] gi|238561329|ref|ZP_00442185.2| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] gi|254175111|ref|ZP_04881772.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|254196454|ref|ZP_04902878.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|254357505|ref|ZP_04973779.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|124293189|gb|ABN02458.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229] gi|148026569|gb|EDK84654.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|160696156|gb|EDP86126.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|169653197|gb|EDS85890.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|238524791|gb|EEP88222.1| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] Length = 240 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 34 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 93 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 94 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 153 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQ 176 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + Sbjct: 154 LSSA--VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDA 211 Query: 177 LNITIATIVAP 187 N IA+ P Sbjct: 212 ENPVIASATIP 222 >gi|258654661|ref|YP_003203817.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] gi|258557886|gb|ACV80828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] Length = 207 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 12/188 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R + GKG AR +R+ G++PA++YG+ +DP+ ++L+A++ + + K T+ Sbjct: 3 EVRLIAETRTEFGKGFARRIRRAGKVPAVLYGHGTDPRHLSLTAREFAAAI--KGGANTV 60 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LTL + G EL +PK P+ D H D L V G VTV VPV + + G Sbjct: 61 LTLQLEGGDEL--ALPKSVVRHPLRDYFEHVDLLLVRRGEKVTVEVPV-IVEGDAESGTL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN-ITI 181 L + EV L +IPDS++VDL G I D+ LP S ++ + + Sbjct: 118 VLNDLTTLSIEVEAL----SIPDSLSVDLTGAVAGTQILAGDVTLPAGASLITDAEALVV 173 Query: 182 ATIVAPIS 189 A VAP + Sbjct: 174 AVTVAPTA 181 >gi|297193932|ref|ZP_06911330.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] gi|197720295|gb|EDY64203.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] Length = 198 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N + Sbjct: 3 EVKLTAERRSEFGKGAARRIRRDNKVPGVLYGHGTDPVHVTLPGHELLLALRTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 ++LD+G IPK Q DP+ L H D L V G V+V +PV + +PG Sbjct: 60 ISLDLGGTSELAIPKAVQRDPLKGFLEHVDLLLVKRGEKVSVDIPVH-TEGDLAPG---A 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + V + + + A +IP+S+TV + L GDS+ +DI LP+ T+ Sbjct: 116 FLVEHVLNALPVEAEATHIPESVTVSIEGLSAGDSVLAKDITLPKGTT 163 >gi|78067602|ref|YP_370371.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. 383] gi|109893349|sp|Q39CT9|RL25_BURS3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77968347|gb|ABB09727.1| LSU ribosomal protein L25P [Burkholderia sp. 383] Length = 201 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 62 LEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEISPAVKLSSA 121 Query: 127 L-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + + V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ Sbjct: 122 IVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDITLPK 165 >gi|295702290|ref|YP_003595365.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] gi|294799949|gb|ADF37015.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] Length = 209 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + R +R G PA++YGN ++ PI L++ D K + +LTL Sbjct: 5 IQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIREAG-RNGVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + K+ V+ D Q DP+ + +IHADF V + + V + + E K G K+GG L Sbjct: 64 QVDKQKYSVMLHDIQTDPLKNEIIHADFQVVDMKKEIDIEVSLSLVGEAK--GTKEGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +E+SL +IP SI VD+++L I D+I + DI++ +K T+A+++ P Sbjct: 122 QQSLYEISLKGLPQDIPSSIDVDVSELGINDTITVADIKVDKKLEITHNAEDTVASVLPP 181 >gi|258513562|ref|YP_003189784.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] gi|257777267|gb|ACV61161.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] Length = 219 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 7/189 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ GKG + L G +PA++Y KP+ L A+ + L SK +++ Sbjct: 10 ASLDAYPREGCGKGYSNKLFSKGYMPAVLYSKSIGSKPLELEARALEDVLKSKTGRNSVI 69 Query: 66 TLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + G++ V+ KD Q P+ +HADFL++S V + V + E +PG+ Sbjct: 70 DLHLKSGDGEDSYKVMVKDLQYHPIRRSYLHADFLEISLTDRVQIAAKVVLVGE--APGV 127 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++GG L+ + EV + C +IPD ITVD++ L IGDS+ + D++ ++ ++ Sbjct: 128 AEEGGILDQIIREVGVKCLPGSIPDIITVDVSKLYIGDSVAVMDLQAGPDIEILADEDLV 187 Query: 181 IATIVAPIS 189 +A ++ P S Sbjct: 188 VARVIPPQS 196 >gi|254388783|ref|ZP_05004015.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294813076|ref|ZP_06771719.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|197702502|gb|EDY48314.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294325675|gb|EFG07318.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] Length = 195 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 13/172 (7%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N Sbjct: 1 MHMSEVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+LDI IPK Q D + L+H D L V G VTV VPV+ E Sbjct: 61 L---LSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGE----- 112 Query: 121 IKQGGKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + GG N+ H + L A +IP ++TV + L GD+IH +DI LP+ Sbjct: 113 LAPGG--NLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPK 162 >gi|91781712|ref|YP_556918.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia xenovorans LB400] gi|122970734|sp|Q145X3|RL25_BURXL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91685666|gb|ABE28866.1| LSU ribosomal protein L25P [Burkholderia xenovorans LB400] Length = 207 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 2 KVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 62 LEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQETNPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP Sbjct: 122 VISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLP 164 >gi|325286677|ref|YP_004262467.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] gi|324322131|gb|ADY29596.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] Length = 203 Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 91/159 (57%), Gaps = 8/159 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K ++ R+ VGK + + LR G +P ++YG +P+ SA +++ + +Y+ N Sbjct: 2 KSITITGSKRESVGKKATKALRNAGMVPCVVYGG---EQPLHFSAPELAFKDLVYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+ G E V+ + +D Q PVSD +IH DF Q+ + VT+ +PVR + SPG+ Sbjct: 59 TVVIDLENG-EKVNAVIQDIQFHPVSDRIIHIDFYQLFDDKAVTMDIPVRLVGN--SPGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + GG+L ++++ +PD VD+N LKIG +I Sbjct: 116 RNGGRLLFRKRKLTIKALPAKLPDFFDVDINKLKIGGNI 154 >gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54] Length = 204 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 2/164 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 2 KFTATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASILQ 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + + G + V+ + Q ++H DF +V + VP+ F+N SP +K G Sbjct: 62 MQLEGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLSG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ V E+ + C + +P I V+L D+ G SIH+ DI+LP Sbjct: 122 AIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIKLP 165 >gi|256374804|ref|YP_003098464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] gi|255919107|gb|ACU34618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] Length = 197 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+A R + GKG+AR R+ G+IPA++YG+ SDPK +AL A + + R+ ++ + Sbjct: 3 EVRLAAEQRTEFGKGAARRTRRAGKIPAVLYGHGSDPKHLALPALEFA-RVVREHGQNAV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTLDI + K P+ + + H D L V G VTV VP+ E + + Sbjct: 62 LTLDIDSATELALTKTVTTHPLKNYIEHVDLLLVKRGEKVTVDVPIVLTGEPAAATL--- 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L + + A NIPD I + L G +H D+ LP+ ++ Sbjct: 119 --LTQESTTIQVEADALNIPDQIEFSIAGLGAGTQVHASDLELPKGST 164 >gi|294496923|ref|YP_003560623.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] gi|294346860|gb|ADE67189.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] Length = 209 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + R +R G PA++YGN ++ PI L++ D K + +LTL Sbjct: 5 IQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIREAG-RNGVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + K+ V+ D Q DP+ + ++HADF V + V + + E K G K+GG L Sbjct: 64 QVDKQKYSVMLHDIQTDPLKNEIVHADFQVVDMKKEIDTEVSLSLVGEAK--GTKEGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+SL +IP SI VD++ L I D+I + DI++ +K T+A+++ P Sbjct: 122 QQSLHEISLKGLPQDIPSSIDVDVSGLGINDTITVADIKVDKKLEITHDAQDTVASVLPP 181 >gi|325858418|ref|ZP_08172580.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|327313924|ref|YP_004329361.1| 50S ribosomal protein L25, Ctc-form [Prevotella denticola F0289] gi|325483056|gb|EGC86044.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|326944809|gb|AEA20694.1| ribosomal protein L25, Ctc-form [Prevotella denticola F0289] Length = 204 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 99/167 (59%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALS----AKDISKRLYSK 58 KE K++ R +GK +++L+RK G +P +YG D KP+ALS ++ K +Y+ Sbjct: 2 KEIKVTGQKRTDLGKKASKLVRKEGLVPCNLYGEARKDGKPVALSFTASMAELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+ V+ K+ Q PV+D L+H DF +V++ +T+ VPV+ + + Sbjct: 62 HIYVVELVID-GESHTAVL-KELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG++N+ ++++ P IP+ + +++ DL++G SI + ++ Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTDLRLGKSIKVGEL 164 >gi|312194510|ref|YP_004014571.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] gi|311225846|gb|ADP78701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] Length = 209 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 5/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R + GKG AR R+ G++PA++YG+ P+ IALS +++ + + Sbjct: 3 EVRIVAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALSQRELLHAFKTDAGTNVL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+D+G +PKD Q P+ H D + V G VTV VPV E I Sbjct: 63 LTVDLGDGTELALPKDVQRHPIKGSFEHVDLVIVRRGEKVTVDVPVNITGELHPDAI--- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L+ VS+ PA IPDS+TVD+ + G + LP+ Sbjct: 120 --LDQPNTTVSVSAPATAIPDSLTVDITGMGPGSHYTAGQLELPD 162 >gi|325110027|ref|YP_004271095.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] gi|324970295|gb|ADY61073.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] Length = 211 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 5/181 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R++VG + + LR G+ P +YG+ + A+ A+ + + S + ++ Sbjct: 6 KLVAAERNEVGTNATKRLRNEGRTPGTLYGHNEGTRHFAVEAEALQPIIASGH---KVVD 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+IG + +D Q D S ++H D L+V+E VT V + +PG+ GG Sbjct: 63 LEIGGATEKTMIQDVQWDTFSQYVLHFDLLRVNEKERVTTDV--ELVTRGIAPGVLAGGI 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +V H + + CP +P+ +T+ +N L+IGDSI + D+ LP ++ + IVA Sbjct: 121 LELVHHSLPIECPVIRLPEQVTLRINKLQIGDSITVGDLELPTDVTTSLPPEEVLVHIVA 180 Query: 187 P 187 P Sbjct: 181 P 181 >gi|116751071|ref|YP_847758.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophobacter fumaroxidans MPOB] gi|166223726|sp|A0LPH1|RL25_SYNFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116700135|gb|ABK19323.1| LSU ribosomal protein L25P [Syntrophobacter fumaroxidans MPOB] Length = 199 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L A R K GKG AR LR+N +PA++YG ++ +++ + + + L + + Sbjct: 2 DIELVAQTRTKSGKGPARALRRNEMVPAVLYGPKAETVSLSVPRQRLERLLRDMGEESKL 61 Query: 65 LTL----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L L D E+ V+ ++ Q+ PV +H DF +V + V VPV + E G Sbjct: 62 LRLTVEGDGTAEMKQVLIREVQVHPVRRRFLHVDFYEVPLDHPIVVEVPVELLGE--PVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG LN++ +S+ C IP+ + VD++ L IG SI +E +R + Sbjct: 120 VKKGGTLNLIQRMLSVRCLPGEIPEKVQVDVSKLDIGSSIQVEQLRTIVPFELTDDGGMA 179 Query: 181 IATIVAP 187 + +VAP Sbjct: 180 VVNVVAP 186 >gi|167585421|ref|ZP_02377809.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ubonensis Bu] Length = 201 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 1/173 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 62 LEVAGASQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ V E+ + C ++P+ + +DL+ ++ G S+H +DI LP+ + ++ ++ Sbjct: 122 IISHVATEIEVECLPADLPEFLEIDLSKIEAGQSLHAKDIVLPKGVALIAHVD 174 >gi|332519193|ref|ZP_08395660.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] gi|332045041|gb|EGI81234.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] Length = 210 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 8/170 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI--SKRLYSKNFM 61 K ++ R+ VGK S + LR GQ+P ++YG K + SA ++ SK +Y+ N Sbjct: 2 KSITINGSQRESVGKKSTKALRNAGQVPCVLYGG---DKAVHFSAAELAFSKLVYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+ G + + I +D Q PV+D ++H DF QV E +T+ +PVR+I + G+ Sbjct: 59 TVVIELE-GGDTYNAILQDIQFHPVTDRILHIDFYQVFEDKEITMDIPVRYIGNPR--GV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 + GG L + + N+PD I D+ +LKIG+ +++ + + T Sbjct: 116 RNGGVLRKNKRSLRVKALPGNLPDYIDADIENLKIGNKLYITKLESEDYT 165 >gi|323344944|ref|ZP_08085168.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] gi|323094214|gb|EFZ36791.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] Length = 209 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 98/167 (58%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALS----AKDISKRLYSK 58 KE +S R+ +GK ++++LRK G +P +YG D KP+AL+ ++ K +Y+ Sbjct: 2 KEINVSGQKREDLGKKASKVLRKEGLVPCNLYGEAKQDGKPVALAFASPMSELRKIVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+E ++ K+ Q PV+D L+H DF +V++ +T+ +PV+ + + Sbjct: 62 HIYVIRLIID-GEEHTAIL-KELQFHPVTDALLHVDFFEVNDQKPITIGIPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG++N+ ++++ P IP+ + +D+ L IG SI + ++ Sbjct: 118 QGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTKLTIGKSIKVGEL 164 >gi|257140316|ref|ZP_05588578.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|109893350|sp|Q2T1B8|RL25_BURTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 208 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 ENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP +K Sbjct: 62 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAVK 121 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP Sbjct: 122 LSSA--VVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLP 168 >gi|330465678|ref|YP_004403421.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] gi|328808649|gb|AEB42821.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] Length = 235 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 15/187 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + R N + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRKGGANQLF 62 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I D + L +PK Q DP+ D H D L V G VTV VPV E Sbjct: 63 AIEVSDGTQAL--ALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVELTGE------- 113 Query: 123 QGGKLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K ++ H+ VS+ A +PD + + + G + D+ LP Sbjct: 114 -AAKDTLIVHDHDTVSVTAEATKVPDHLEASIEGAEPGVQVTAADVDLPAGVELAGDPEQ 172 Query: 180 TIATIVA 186 T+AT+ A Sbjct: 173 TVATVTA 179 >gi|134297987|ref|YP_001111483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum reducens MI-1] gi|172044207|sp|A4J0Q5|RL25_DESRM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134050687|gb|ABO48658.1| LSU ribosomal protein L25P [Desulfotomaculum reducens MI-1] Length = 210 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A +R K + +R NG IP ++YG I++ AKD+ L S T+ Sbjct: 3 DTALNANLRKTATKSIVKEIRNNGGIPGVVYGKHVGSMAISVDAKDLKNILGSVTGRNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + ++I V+ K Q+DP+ + H DF QVSE + + +PV+ + K G+ G Sbjct: 63 INMNINGSKQTVMVKSLQMDPMHQNIRHVDFQQVSENTKIRTVIPVQLVGTPK--GVAMG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI--- 181 G + + C N IP++I VD++ L+IGD++ + D+ LP + + T+ Sbjct: 121 GVIQHDLRSAEIECLPNRIPEAIQVDISGLEIGDTLSVSDLNLPPGVKILDHPHTTVVGL 180 Query: 182 ATIVAP 187 ATI AP Sbjct: 181 ATIKAP 186 >gi|256833157|ref|YP_003161884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] gi|256686688|gb|ACV09581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] Length = 193 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 7/180 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + KL A R GKG+AR LR++G +PA+IY + S + I L ++ L KN +++ Sbjct: 3 DVKLVASARTSFGKGAARQLRRDGHVPAVIYSHGSAAEHIYLDGHEVF--LTVKNHRSSL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +D+ E+ VI KD Q DP+ ++ H DFL V +G TV VPV + E + G Sbjct: 61 LNIDLDGEVKTVIIKDVQRDPIGRVVEHIDFLAVKKGEKSTVEVPVVLVGEAAA-----G 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + ++ + +P+++ V ++ L+ G ++++D+ LP+ +++ + +A + Sbjct: 116 AQATLELMKATVEADVSVLPENVEVSVDGLEAGTVLYVKDVTLPDGQVFINEDDQVVAVV 175 >gi|282879284|ref|ZP_06288029.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] gi|281298566|gb|EFA90990.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] Length = 217 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 94/162 (58%), Gaps = 9/162 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALS----AKDISKRLYSK 58 KE +S R+ +GK +++ LRK G +P IYG +D KP AL+ ++ K +Y+ Sbjct: 2 KEINVSGKKREDLGKKASKQLRKEGYVPCNIYGAAQADGKPEALAFAAPMSELRKVVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + + Sbjct: 62 HIY--VINLNIDGESHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 G++ GG++N+ +V++ P IP+ + +D+ +LKIG SI Sbjct: 118 QGVRDGGRMNLSIRKVNVTAPYQRIPEHLDIDVTNLKIGKSI 159 >gi|315223765|ref|ZP_07865615.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] gi|314946340|gb|EFS98339.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] Length = 199 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 95/164 (57%), Gaps = 15/164 (9%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-----NMSDPKPIALSAKDISKRLYSK 58 K + R+ VGK +++ LR GQ+P ++YG + S P+ L+ K+I +Y+ Sbjct: 2 KSITIKGSQRESVGKAASKALRNAGQVPCVLYGGDNVLHFSAPE---LAFKNI---VYTP 55 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N T + L+ GK + I +D Q DPVSD +IH DF Q+ + +T+ VP++ E S Sbjct: 56 NVYTAAIELN-GKTY-NAILQDIQFDPVSDKIIHIDFYQLQKDKEITIEVPIQI--EGTS 111 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 PGI GG L +V ++ + +N+PD + VD++ L++G+ +++ Sbjct: 112 PGIMAGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYV 155 >gi|325298380|ref|YP_004258297.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] gi|324317933|gb|ADY35824.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] Length = 198 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 95/170 (55%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK------PIALSAKDISKRLYS 57 K ++ +R + GK + LRKN Q+P I+YG D P A++ + + +Y+ Sbjct: 2 KSIDITGSLRTETGKKATHDLRKNNQVPCILYGMKKDENGNPAATPFAVTVEGLRNLVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I ++V+ I KD Q PV+D ++H DF Q++E + + + VPV+ E Sbjct: 62 PHIY--VVNLNIDGQVVNAIMKDIQFHPVTDAILHVDFYQINEENPIVMEVPVQL--EGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G+K GGKL + ++ + NNIP+ + +++ +L +G +I + ++ Sbjct: 118 AEGVKAGGKLALQVRKLKVKALYNNIPERLVINVTNLGLGKTIKVGELHF 167 >gi|284159402|ref|YP_441031.3| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|83654462|gb|ABC38525.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia thailandensis E264] Length = 223 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 17 ENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 76 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP +K Sbjct: 77 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAVK 136 Query: 123 QGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP Sbjct: 137 LSSA--VVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLP 183 >gi|53724085|ref|YP_104605.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei ATCC 23344] gi|121600473|ref|YP_991440.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei SAVP1] gi|126449568|ref|YP_001082450.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10247] gi|161723210|ref|YP_107146.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei K96243] gi|162210089|ref|YP_332166.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1710b] gi|167718014|ref|ZP_02401250.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei DM98] gi|167737031|ref|ZP_02409805.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 14] gi|167814140|ref|ZP_02445820.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 91] gi|167822665|ref|ZP_02454136.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 9] gi|167844236|ref|ZP_02469744.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei B7210] gi|167892746|ref|ZP_02480148.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 7894] gi|167901242|ref|ZP_02488447.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei NCTC 13177] gi|167909460|ref|ZP_02496551.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 112] gi|167917488|ref|ZP_02504579.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei BCC215] gi|237810771|ref|YP_002895222.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] gi|254181866|ref|ZP_04888463.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|254187800|ref|ZP_04894312.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|254201692|ref|ZP_04908056.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|254207026|ref|ZP_04913377.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|254296082|ref|ZP_04963539.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|68053085|sp|Q62FC2|RL25_BURMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223666|sp|A3MQB4|RL25_BURM7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223667|sp|A1UZN7|RL25_BURMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52427508|gb|AAU48101.1| ribosomal protein L25 [Burkholderia mallei ATCC 23344] gi|121229283|gb|ABM51801.1| 50S ribosomal protein L25 [Burkholderia mallei SAVP1] gi|126242438|gb|ABO05531.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247] gi|147747586|gb|EDK54662.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|147752568|gb|EDK59634.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|157805601|gb|EDO82771.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|157935480|gb|EDO91150.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|184212404|gb|EDU09447.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|237505924|gb|ACQ98242.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] Length = 204 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 8/187 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 LEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSSA 121 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNIT 180 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + N Sbjct: 122 --VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPV 179 Query: 181 IATIVAP 187 IA+ P Sbjct: 180 IASATIP 186 >gi|205371997|ref|ZP_03224815.1| 50S ribosomal protein L25 (general stress protein Ctc) [Bacillus coahuilensis m4-4] Length = 214 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTI 64 +L+A R+ + LR G IPA++YG+ D I + K R +N I Sbjct: 4 QLTATKREGFKRSDLTSLRNQGSIPAVVYGHKMDSTSIMIDEPSFIKTMREVGRN---GI 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L + V+ DYQ DP+ D ++HADFL ++ + V + + + + G+K G Sbjct: 61 INLLVDGNKTQVVLTDYQRDPIKDEVVHADFLAINMSEDMEASVRIDLVGD--AAGVKDG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + HE+S+ + PDSI VD+ +L++G++I + DIR + ++T+A+I Sbjct: 119 GVMQQPLHEISVTAKPQDFPDSIKVDVENLQVGETITVGDIRQQFSYELNLEDDVTVASI 178 Query: 185 VAP 187 +AP Sbjct: 179 LAP 181 >gi|163841717|ref|YP_001626122.1| 50S ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] gi|162955193|gb|ABY24708.1| LSU ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] Length = 229 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG+AR R+ QIPA+IYG+ ++P IAL ++ + N + Sbjct: 27 ETKLAAQLRTEFGKGAARRARRANQIPAVIYGHGAEPIHIALPERETIRAARGAN---AL 83 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTLDI E + KD Q DPV I+ H D L V G VTV +PV E + G Sbjct: 84 LTLDINGEEHLALVKDIQRDPVLQIIEHIDLLTVRRGEKVTVDIPVVLTGE-----VAPG 138 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +N + +S+ A ++P S+ V + G+ + DI LP+ S ++ IA I Sbjct: 139 AVVNQDANTISVEAEATHLPSSLEVSIEGRNPGEHVFASDIVLPQGVSLLADAETLIANI 198 Query: 185 VAP 187 P Sbjct: 199 SEP 201 >gi|222099805|ref|YP_002534373.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] gi|254801063|sp|B9K7S4|RL25_THENN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221572195|gb|ACM23007.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] Length = 215 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 7/185 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LT 66 L +R GK A+ LR+ G++PA++YG +DP P+ + + K ++ T I L Sbjct: 4 LEVRLRTPKGKREAKRLRRRGEVPAVVYGPATDPIPVKIKRSLLEKVFHTITETTPIRLV 63 Query: 67 LDIGKELV----HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +E V K Q D VS+ ++H DF + +G + ++VP++ + K G++ Sbjct: 64 IKDDEERTVSEKTVFLKMIQRDKVSEAIVHVDFYEPVKGHRMRINVPLKVVG--KPVGVE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V E+ + + +P I VD++ L +GD IH D++LPE + + + Sbjct: 122 KGGFLEVYHEEIPVETDPDRVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEDEEAVV 181 Query: 183 TIVAP 187 +I+ P Sbjct: 182 SILVP 186 >gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella parapertussis 12822] gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella bronchiseptica RB50] gi|71153123|sp|Q7WNY3|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153125|sp|Q7W180|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis] gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50] Length = 204 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 2/168 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 2 KFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASILN 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + I G + V+ + Q ++H DF +V + VP+ FIN SP +K G Sbjct: 62 MVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLSG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + Sbjct: 122 AIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVT 169 >gi|315501801|ref|YP_004080688.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Micromonospora sp. L5] gi|315408420|gb|ADU06537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora sp. L5] Length = 231 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 15/187 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + K + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-KGGANQL 61 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ G +++ +PK Q DP+ D H D L V G VTV VPV+ E Sbjct: 62 FAIEVSDGTQVL-ALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGE------- 113 Query: 123 QGGKLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K ++ H+ +S+ A +PD + + + G +I D+ LP + Sbjct: 114 -AAKDTLIVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEET 172 Query: 180 TIATIVA 186 +A++ A Sbjct: 173 AVASVTA 179 >gi|302865257|ref|YP_003833894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] gi|302568116|gb|ADL44318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] Length = 231 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 15/187 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + K + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-KGGANQL 61 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ G +++ +PK Q DP+ D H D L V G VTV VPV+ E Sbjct: 62 FAIEVSDGTQVL-ALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGE------- 113 Query: 123 QGGKLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K ++ H+ +S+ A +PD + + + G +I D+ LP + Sbjct: 114 -AAKDTLIVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEET 172 Query: 180 TIATIVA 186 +A++ A Sbjct: 173 AVASVTA 179 >gi|116669780|ref|YP_830713.1| 50S ribosomal protein L25P [Arthrobacter sp. FB24] gi|116609889|gb|ABK02613.1| LSU ribosomal protein L25P [Arthrobacter sp. FB24] Length = 199 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 8/164 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + N + Sbjct: 3 EQKLAAEVRTEFGKGFARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVRVAN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTLDI E + KD Q DP+ I+ H D L V G VTV VPV E +PG Sbjct: 60 LTLDINGEQHLALVKDIQRDPIKQIIEHLDLLTVRTGEKVTVDVPVHVTGE-LAPGNVYN 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ V VSL A ++P ++ V + G+ IH D+ LP Sbjct: 119 QEMTV----VSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLP 158 >gi|294787655|ref|ZP_06752899.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] gi|294483948|gb|EFG31631.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] Length = 188 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR + ++PA++YG + + K I + K++ L ++F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHDSKVPAVVYG-LGETKAITVDHKEMFYALQKESFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 +I + VI +DYQ+ PV + H DF + V + +P+ N S +K Q G+ Sbjct: 63 NIDGKEQDVIVRDYQMHPVKRQVQHIDFQAIDINQPVRIKLPIHIKNAEISHAVKMQAGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ D PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCAKVVAGDILHLSDFVYPEGVQSIALKRNSNLAVAT 182 Query: 184 I 184 + Sbjct: 183 V 183 >gi|326441622|ref|ZP_08216356.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces clavuligerus ATCC 27064] Length = 193 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N + Sbjct: 3 EVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+LDI IPK Q D + L+H D L V G VTV VPV+ E + G Sbjct: 60 LSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGE-----LAPG 114 Query: 125 GKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G L V + + A +IP ++TV + L GD+IH +DI LP+ Sbjct: 115 GNLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPK 160 >gi|256820643|ref|YP_003141922.1| 50S ribosomal protein L25/general stress protein Ctc [Capnocytophaga ochracea DSM 7271] gi|256582226|gb|ACU93361.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Capnocytophaga ochracea DSM 7271] Length = 199 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 95/164 (57%), Gaps = 15/164 (9%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-----NMSDPKPIALSAKDISKRLYSK 58 K + R+ VGK +++ LR GQ+P ++YG + S P+ L+ K+I +Y+ Sbjct: 2 KSITIKGSQRESVGKAASKALRNAGQVPCVLYGGDNVLHFSAPE---LAFKNI---VYTP 55 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N T + L+ GK + I +D Q DPVSD +IH DF Q+ + +T+ VP++ E S Sbjct: 56 NVYTAAIELN-GKTY-NAILQDIQFDPVSDKIIHIDFYQLHKDKEITIEVPIQI--EGTS 111 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 PGI GG L +V ++ + +N+PD + VD++ L++G+ +++ Sbjct: 112 PGIMAGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYV 155 >gi|291286406|ref|YP_003503222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] gi|290883566|gb|ADD67266.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] Length = 207 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 90/181 (49%), Gaps = 4/181 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R ++ G +R+ G +PAII D + L+AKDI KR + NF + Sbjct: 6 KWDATKRKQMTDGELNDMRRQGFVPAIISIRGEDSVSVFLNAKDIQKRPFG-NFRIELKV 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 I KE K Q + SD +IHAD + +G + + V F+ E G+K GG Sbjct: 65 KGI-KEPFDCFLKTLQYNHTSDKVIHADLQALVKGQEIDIDVHFDFVGE--PAGLKMGGI 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LN V + NIP+ ITVD++ L IGDSIH+ DI+ E+ + + TIA + Sbjct: 122 LNTGHTSVKIRTLPRNIPEKITVDISGLNIGDSIHISDIKFSEEHTLLEPTEGTIAYVSE 181 Query: 187 P 187 P Sbjct: 182 P 182 >gi|50842019|ref|YP_055246.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] gi|50839621|gb|AAT82288.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] Length = 229 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 31 LKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 87 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 88 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 146 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 147 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAF 202 Query: 187 P 187 P Sbjct: 203 P 203 >gi|330818353|ref|YP_004362058.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] gi|327370746|gb|AEA62102.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] Length = 204 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 2 KVVAFERTLQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 L++ + +V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 62 LEVAGKSQNVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSSA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NITIA 182 ++ V E+ + C +P+ + VDL+ L+ G S+H +DI LP S ++ + N IA Sbjct: 122 VVSHVVVELDIECLPAALPEFLEVDLSKLEAGQSVHAKDIVLPNGVSLVAHVDAENPVIA 181 Query: 183 TIVAP 187 T P Sbjct: 182 TATIP 186 >gi|289424136|ref|ZP_06425919.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289428386|ref|ZP_06430072.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|295130101|ref|YP_003580764.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|68053104|sp|Q6AAC8|RL25_PROAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|289154833|gb|EFD03515.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289158358|gb|EFD06575.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|291376922|gb|ADE00777.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|313765348|gb|EFS36712.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA1] gi|313772663|gb|EFS38629.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL074PA1] gi|313806689|gb|EFS45196.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA2] gi|313810886|gb|EFS48600.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA1] gi|313814603|gb|EFS52317.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA1] gi|313815245|gb|EFS52959.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA1] gi|313826760|gb|EFS64474.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA1] gi|313828550|gb|EFS66264.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA2] gi|313832005|gb|EFS69719.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL007PA1] gi|313834455|gb|EFS72169.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL056PA1] gi|313840312|gb|EFS78026.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL086PA1] gi|314916009|gb|EFS79840.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA4] gi|314916914|gb|EFS80745.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA1] gi|314921555|gb|EFS85386.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA3] gi|314931121|gb|EFS94952.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL067PA1] gi|314954822|gb|EFS99228.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA1] gi|314958988|gb|EFT03090.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA1] gi|314969389|gb|EFT13487.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA1] gi|314974457|gb|EFT18552.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA1] gi|314977353|gb|EFT21448.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL045PA1] gi|314980491|gb|EFT24585.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA2] gi|314985548|gb|EFT29640.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA1] gi|314987504|gb|EFT31595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA2] gi|314989030|gb|EFT33121.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA3] gi|315081845|gb|EFT53821.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL078PA1] gi|315082662|gb|EFT54638.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA2] gi|315087619|gb|EFT59595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA1] gi|315097621|gb|EFT69597.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL038PA1] gi|315099745|gb|EFT71721.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA2] gi|315101950|gb|EFT73926.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA1] gi|315106543|gb|EFT78519.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA1] gi|315110331|gb|EFT82307.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA2] gi|327331620|gb|EGE73359.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA2] gi|327333603|gb|EGE75323.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA3] gi|327335128|gb|EGE76839.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL097PA1] gi|327445369|gb|EGE92023.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA2] gi|327446983|gb|EGE93637.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA1] gi|327449980|gb|EGE96634.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA2] gi|327454824|gb|EGF01479.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA3] gi|327455681|gb|EGF02336.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA2] gi|328755880|gb|EGF69496.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA1] gi|328756663|gb|EGF70279.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA2] gi|328758616|gb|EGF72232.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL020PA1] gi|328761611|gb|EGF75127.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL099PA1] gi|332674942|gb|AEE71758.1| 50S ribosomal protein L25 [Propionibacterium acnes 266] Length = 205 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 123 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAF 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|217967173|ref|YP_002352679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] gi|226736311|sp|B8DZY2|RL25_DICTD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217336272|gb|ACK42065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] Length = 207 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 8/181 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDIS---KRLYSKNFMTTILTLD 68 RDK+GK A+ R++ IP ++YG ++ + I + KD+ K+ ++K L ++ Sbjct: 11 RDKIGKQFAKKYRRSNLIPGVVYGAHLKENIHILVEKKDLWSLIKKGHAKEQHLLRLIIE 70 Query: 69 IGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 G+ + + I +D Q+DP+ D +H DF ++ V V+VP+ + E K GIKQGG Sbjct: 71 NGENTITENAILQDLQIDPIKDEFLHVDFHAITLEELVDVYVPILLVGEAK--GIKQGGI 128 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L E+ + ++P I VD+ DL+IG+SI + D++ PE ++ L+ + I+ Sbjct: 129 LQHGVEEILIRALPLDVPPHIEVDITDLEIGESITVGDLKFPENIKVLTPLDEVVVGIIP 188 Query: 187 P 187 P Sbjct: 189 P 189 >gi|282853609|ref|ZP_06262946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|282583062|gb|EFB88442.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|314922165|gb|EFS85996.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL001PA1] gi|314965248|gb|EFT09347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA2] gi|314982385|gb|EFT26478.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA3] gi|315092574|gb|EFT64550.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA4] gi|315094008|gb|EFT65984.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL060PA1] gi|315104560|gb|EFT76536.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA2] gi|327329538|gb|EGE71298.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL103PA1] Length = 200 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 9/185 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 123 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAF 178 Query: 187 PISGS 191 P + S Sbjct: 179 PETES 183 >gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax paradoxus EPS] gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus EPS] Length = 223 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR +G+ P I+YG P+ I + + L + F ++IL Sbjct: 2 KFVAFERAKQGTGASRRLRISGKTPGIVYGGEGLQPQLIEIDHNALWHALKKEAFHSSIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++G V+ +D Q P ++ H DF +V + + + VP+ F E +S +K Sbjct: 62 EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLHFKGEEESEAVKTAH 121 Query: 126 KL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIA 182 L N V E+ + C +++P+ I VDL+ L ++H+ DI+LP+ K S + N I Sbjct: 122 NLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKGVKYVSHGKQNPVIV 181 Query: 183 TIVAPI 188 + V P+ Sbjct: 182 SAVPPL 187 >gi|297562917|ref|YP_003681891.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847365|gb|ADH69385.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 205 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG++R R+ G++PA++YG+ ++P+ + L ++ L + N + + Sbjct: 3 EVRIAAEPRTEFGKGASRRARRAGKVPAVLYGHGTEPRHLNLPGHELMLALKTPNVLIRL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LD +PK Q D + L H D L VS+G V V +PV I E K+PG+ Sbjct: 63 DGLDKDN---LALPKSVQRDAIKGFLEHIDLLVVSKGEKVEVEIPVNLIGEVKAPGV--- 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V++ A +IP+ + + DL+IG + D++LP + + + T+ Sbjct: 117 --LTQELVTVAVEAEATHIPEGVEFVVEDLEIGATPTAADVKLPSGVTLATDPEAILLTV 174 Query: 185 VAP 187 AP Sbjct: 175 SAP 177 >gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella petrii DSM 12804] gi|226736285|sp|A9I6W5|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii] Length = 207 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 3/172 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 2 KFNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASILQ 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + + GKE V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 62 MQLDGKEEA-VLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFINGENSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 ++ V E+ + C +P I VDL +L G S+H+ D++LP+ + ++ Sbjct: 121 AIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSDVKLPKGVTYVAH 172 >gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] Length = 216 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 2/164 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 15 KFIATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASILQ 74 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + G + V+ + Q ++H DF +V + VP+ F+N SP +K G Sbjct: 75 MQLEGSKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEISPAVKLAG 134 Query: 126 KL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + V E+ + C +P I VDL ++ G SIH+ DI+LP Sbjct: 135 AMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADIKLP 178 >gi|169830288|ref|YP_001716270.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Desulforudis audaxviator MP104C] gi|226736307|sp|B1I196|RL25_DESAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169637132|gb|ACA58638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Desulforudis audaxviator MP104C] Length = 211 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG L++NG IPA+IYG + + + + + +K ++ L Sbjct: 6 LKARPRAGRGKGYRNRLKQNGLIPAVIYGKEVGSLLLEVETRAVQD-ILTKTGRNALIQL 64 Query: 68 DIGKEL-----VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + E I KD + P + H DF Q+S +T V ++ +PG+ Sbjct: 65 RVEPEKGRAKKYDAIIKDVHMHPYKNEFFHVDFHQISLKDELTTSVNLKLTG--SAPGVT 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L + +V + C NIPD I VD++ L IGD+IH+ D++ PE + ++T+ Sbjct: 123 AGGRLEQLIRQVEVSCLPRNIPDHIEVDVSGLGIGDAIHVSDLKAPEGVKFETDGDVTVV 182 Query: 183 TIVAP 187 T++AP Sbjct: 183 TLIAP 187 >gi|313821706|gb|EFS59420.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA1] gi|313824403|gb|EFS62117.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA2] gi|314926811|gb|EFS90642.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA3] Length = 205 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 123 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAF 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis Tohama I] gi|71153126|sp|Q7VUH2|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I] gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis CS] Length = 208 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 2/168 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F IL Sbjct: 6 KFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHALILN 65 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + I G + V+ + Q ++H DF +V + VP+ FIN SP +K G Sbjct: 66 MVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFINAEVSPAVKLSG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + Sbjct: 126 AIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVT 173 >gi|212637894|ref|YP_002314414.1| 50S ribosomal protein L25/general stress protein Ctc [Anoxybacillus flavithermus WK1] gi|226736278|sp|B7GFH9|RL25_ANOFW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212559374|gb|ACJ32429.1| Ribosomal protein L25 (general stress protein Ctc) [Anoxybacillus flavithermus WK1] Length = 208 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 7/181 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + + +RK G IPA++YG ++ +P+ + A + K+L + T +L Sbjct: 5 LQLQLRTDHRRSYVKQMRKQGHIPAVLYGKTTNSQPVFVDAAEFLKQLRATGG-TGLLDA 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + +I +D Q P+ +IH DFL V + + VHVP+ + E + G+K GG L Sbjct: 64 KMNDNHIRIIVRDMQKHPIRHDIIHIDFLAVDAKTEIDVHVPIHLVGE--AAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 H++S+ +NIP SI VD+ +L++GD I + I +T+ ++N ++A Sbjct: 122 QQAMHQLSIRVLPSNIPPSIDVDITNLQVGDVITVSHI----QTNGAYEINHDPTEVIAS 177 Query: 188 I 188 I Sbjct: 178 I 178 >gi|291439151|ref|ZP_06578541.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] gi|291342046|gb|EFE69002.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] Length = 195 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N Sbjct: 1 MNMADVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L +D GKE IPK Q DP+ L H D L+V G V V +PV+ E +PG Sbjct: 61 LIELL-ID-GKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGE-LAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G L V + + A IPD +TV + L+ G S+ +DI LPE Sbjct: 118 ---GNLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPE 163 >gi|282879731|ref|ZP_06288461.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] gi|281306400|gb|EFA98430.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] Length = 216 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 99/178 (55%), Gaps = 9/178 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALS----AKDISKRLYSK 58 KE +S R+ +GK +++ LRK G +P +YG D KP+AL+ ++ K +Y+ Sbjct: 2 KEINVSGQKREDLGKKASKHLRKEGLVPCNLYGEQKEDGKPVALAFAAPMSELRKIVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + + Sbjct: 62 HIY--VINLNIDGEHHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G++ GG++N+ ++++ P IP+ + +D+ L+IG SI + + T + S+ Sbjct: 118 QGVRDGGRMNLSVRKINVTAPYQQIPEHLDIDVTKLRIGKSIKVGQLSFDGLTMATSK 175 >gi|89100524|ref|ZP_01173385.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] gi|89084790|gb|EAR63930.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] Length = 211 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + + LR G IP ++YGN + K I L+ D K + + +L Sbjct: 5 LQAKERKEFRNSNLTQLRNEGNIPGVVYGNKIESKAIYLNGPDFIKTIRETG-RNAVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+ DYQ DP+ + + H DF V +T V + + + + G+K GG L Sbjct: 64 DVEGTKHDVVLSDYQADPLKNEITHLDFRAVDMSQEITAEVRIELVGD--AAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ N+IP S+ V++ DL++G+SI DI+ + + IA+I+AP Sbjct: 122 QQPVHELSVSAKPNDIPQSVEVNIADLQVGESITAADIKAGRGFTINTDDETVIASILAP 181 >gi|313792871|gb|EFS40938.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA1] gi|313802676|gb|EFS43898.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA2] gi|314964289|gb|EFT08389.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA1] gi|315078695|gb|EFT50726.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA2] gi|327456830|gb|EGF03485.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL092PA1] Length = 205 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 9/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARHIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 123 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVAF 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|295838328|ref|ZP_06825261.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] gi|197695879|gb|EDY42812.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] Length = 197 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + I Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSNVLLAI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+ EL VIPK Q DP+ L H D L V+ G V V +PV + +PG Sbjct: 63 -ELNGKNEL--VIPKAVQRDPLKGFLEHVDLLLVNRGEKVQVEIPV-LAEGDLAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVS 163 >gi|254424497|ref|ZP_05038215.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] gi|196191986|gb|EDX86950.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] Length = 216 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 104/178 (58%), Gaps = 14/178 (7%) Query: 22 RLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 + LR+ G +PA++YG + ++ P+ LS D L + +++T+++ GK Sbjct: 17 KRLRREGTLPAVLYGHDGANSLPLKLSNYDAEALLRKASVNKSVITVNVPDVPWSGK--- 73 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHE 133 VI ++ Q P + L H F ++ S + V +P+ F+ + + G+ +GG L+ V E Sbjct: 74 -VILREVQKHPWKNKLHHLSFFSIASQSEIEVSMPINFVGD--AVGVTDEGGTLDTVMTE 130 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISGS 191 + L CP + IP S+ VD+++LKIGD++H+ +I+LP+ TS + ++ + +++AP + + Sbjct: 131 IQLKCPPDAIPQSLDVDVSELKIGDALHVGEIKLPKGTSVTVEPSLLVVSVLAPRTAA 188 >gi|325295185|ref|YP_004281699.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065633|gb|ADY73640.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 195 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 10/169 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMT 62 K L A R+K GKG AR LR+ G +PA+IYG + IA+ A ++ K + + Sbjct: 2 KTVSLKATRREKTGKGVARKLRREGLLPAVIYGGGRPEATHIAIPASEVRKIKHHHGLVK 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GI 121 L LD G+E + ++ KD Q + + D+ IH DF +V G T+T V + F+ +P G+ Sbjct: 62 --LDLD-GEERICIL-KDIQYNWLGDVPIHVDFQEVKFGETITTVVELEFVG---TPIGV 114 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++GG L ++ E+ + IP+ I VD+++L GD++H+ +I +PE Sbjct: 115 SEEGGVLEIMKREIEIETLPRAIPEKIVVDISNLHAGDALHVGEISVPE 163 >gi|332666097|ref|YP_004448885.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] gi|332334911|gb|AEE52012.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] Length = 199 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 5/175 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R +GK ++ LR +G+IP ++YG D +++ D+ +Y+ +F LT+D Sbjct: 11 RTGLGKKPSKDLRNDGRIPCVLYGG-QDVVHFSVTLNDVKNLIYTPDFRVANLTVD--GA 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 I KDYQL P++ L H DFL + EG V + VPVR + SPG+K GGKL + Sbjct: 68 TYRCIVKDYQLHPLTSQLTHIDFLSLVEGQKVKLEVPVR--TKGVSPGVKLGGKLQIKLR 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + + +D+ + +G S+ + DI +PE ++ +I + TI P Sbjct: 126 RAKVKTLPEQMVTELYIDITSMDLGHSLRVRDIIVPEGIELLNAPSIPVVTIEIP 180 >gi|114565644|ref|YP_752798.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319178|sp|Q0B0S7|RL25_SYNWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114336579|gb|ABI67427.1| LSU ribosomal protein L25P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 209 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 105/183 (57%), Gaps = 5/183 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A R+ +G L+++ Q+PA+IYG + PI L ++++ R+++ + + + Sbjct: 5 KLNARKREIKNRGYLNQLKRSEQVPAVIYGKGEEAVPIILEKRELN-RIFNVHGSRGLFS 63 Query: 67 LDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+I E + + ++ Q +PVS LIH DFL V+ + +V V E + +K+G Sbjct: 64 LEIEGESKPMMTLIREIQRNPVSGQLIHLDFLSVNLNEKINSNVGVLLGGEEEV--MKKG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L EV +LC ++P+ ++ D++ L+IG+++H+ D+ +P +++ IA+I Sbjct: 122 GILQAGLKEVEVLCFPQDLPEYLSADISSLEIGETLHVADLIVPAGVEILTEAESVIASI 181 Query: 185 VAP 187 +AP Sbjct: 182 LAP 184 >gi|242280388|ref|YP_002992517.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] gi|242123282|gb|ACS80978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] Length = 196 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 3/183 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ A +R K GK + R LR G +P + Y + ++++ + K +Y K T Sbjct: 3 EKVTFKAELRTKTGKSANRQLRNQGMVPVVFYSQDGENLVLSVNENEFVK-MYRKVGTTR 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +L++ + + Q+DPV H DFL VS+ T+ V VPV + E K+PG+K Sbjct: 62 VFSLEVDGKTYDTLIWKVQMDPVRPRPNHIDFLGVSKDRTLKVDVPV--VTEGKAPGVKL 119 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG++ + ++++ C A +P I V+++ + +GD++ + +I L E S + N + Sbjct: 120 GGRMAIYRPKLTVACTAATLPAEIVVNIDSMNVGDTVFVNEIDLGEGASVVFDNNFALVR 179 Query: 184 IVA 186 A Sbjct: 180 CAA 182 >gi|118579182|ref|YP_900432.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter propionicus DSM 2379] gi|166223702|sp|A1AM04|RL25_PELPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118501892|gb|ABK98374.1| LSU ribosomal protein L25P [Pelobacter propionicus DSM 2379] Length = 199 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 6/171 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M QK+ + +R K GKG +R LR +P ++YG DP ++++ +++ + + Sbjct: 1 MQQKQMNIE--LRSKTGKGISRKLRSADMVPGVVYGKGMDPMAVSINYRELQAAMAGEGG 58 Query: 61 MTTILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++TL G L I D Q D V H D +V+ + V VPV + + + Sbjct: 59 QNNLITLVGGGSLDQSMAIVADLQRDAVKGTYKHVDLHRVNMSEKLRVTVPV--VLKGTA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G+K+GG L+ HE+ + C NIPD I +D+ L + SIH+ +I LPE Sbjct: 117 IGVKEGGLLDFAHHELHVECLPGNIPDHIEIDVTSLAVAHSIHVGEIALPE 167 >gi|86140922|ref|ZP_01059481.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] gi|85832864|gb|EAQ51313.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] Length = 209 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 9/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K ++ R+ VGK + + LR G++P ++YG +P+ +A +I+ + +Y+ + Sbjct: 2 KSITITGSKRESVGKKATKALRNAGEVPCVLYGG---DEPVHFNAPEIAFKDLVYTPDAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T L LD + I +D Q PV+D ++H DF Q+ EG VT+ +PV + E S G+ Sbjct: 59 TATLELDGNTYMA--ILQDIQFHPVTDRILHIDFYQIFEGKEVTMTIPVHY--EGNSRGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + GG L + + N+PD + D+ LKIGD +++ I E Sbjct: 115 RNGGVLRKTYRTLRVKALPKNLPDYVVADITKLKIGDKLYITGIEQGE 162 >gi|220912060|ref|YP_002487369.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] gi|219858938|gb|ACL39280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] Length = 204 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 8/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + + N + Sbjct: 3 EQKLAAELRTEFGKGYARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVRTAN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+LDI E + KD Q DP+ I+ H D L V +G VTV V V E+ +PG Sbjct: 60 LSLDINGEGHLALVKDIQRDPIKQIIEHIDLLTVRKGEKVTVDVAVHVAGES-APGTVH- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 N+ VSL A ++P ++ V + G+ IH D+ LP+ Sbjct: 118 ---NLELTTVSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLPK 159 >gi|50955306|ref|YP_062594.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] gi|71153146|sp|Q6ADQ7|RL25_LEIXX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50951788|gb|AAT89489.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 200 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 85/168 (50%), Gaps = 8/168 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K++A +RD GKG+AR +R G+IPA+IYG+ S+P I L A + L N Sbjct: 1 MADESNKVAAEVRDSFGKGAARKIRAAGKIPAVIYGHGSEPVHITLPAHQVGLLLRKAN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L +DI + + KD Q DPV I+ H D L V G V V VPV E S Sbjct: 60 --AVLDIDIAGKTQLALVKDVQKDPVLQIIEHLDLLVVRRGEKVQVEVPVHVEGEPFSGT 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 I L++ + L A NIP+ I +D+ + G H +D LP Sbjct: 118 IAM---LDIPT--IKLEVEATNIPERIVIDVTGAEEGTQYHAKDFALP 160 >gi|332883267|gb|EGK03550.1| 50S ribosomal protein L25 [Dysgonomonas mossii DSM 22836] Length = 192 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 5/165 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 K +L R +GK + + RK +IPA+IYG + ++ ++ D+ K +Y+ Sbjct: 2 KTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGDQTEAIAFTVTNSDVRKLIYTPEIF- 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L IGK+ I KD Q+ PV+D ++H DFL V EG + + VPV I + + G+K Sbjct: 61 -LVNLTIGKDSYKAILKDVQVHPVTDAILHLDFLHVFEGKPIVMDVPV--ILDGLAEGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL++ ++ + + IP+ + VD+ L +G SI + ++ Sbjct: 118 AGGKLSLDLRKIKVKALYDKIPEKVHVDVTSLALGKSIQVGELHF 162 >gi|149921897|ref|ZP_01910341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] gi|149817250|gb|EDM76727.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] Length = 201 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R GKG +R LR G IPA++YG + +S +++ + + + + T T Sbjct: 8 KLNASVRSNTGKGVSRKLRAQGLIPAVMYGKGEGNVMLTVSPRELRRAMDPQRKLNTFFT 67 Query: 67 LDIGKE-----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L I E + DYQ DP+ D +H DFL+V S + +PV +I ++ G+ Sbjct: 68 LTIQDEGGASSQEQCVVTDYQADPIRDEFLHIDFLRVDPNSEIVTKIPVEYI--GRAVGV 125 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GGKL + +P +TVD++ L G ++ M+D+ L E + ++ + Sbjct: 126 VAGGKLRTYQRTTRVAAKPAEVPVKLTVDVSPLDAGSTLRMKDLNL-ENARLLDHPDVVV 184 Query: 182 ATIVAP 187 A + P Sbjct: 185 AHVDPP 190 >gi|206890546|ref|YP_002249253.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] gi|226736374|sp|B5YG55|RL25_THEYD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206742484|gb|ACI21541.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] Length = 214 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R++ GKG AR LR G IP +IY N P+ + K++ + +TL Sbjct: 6 LNVEKRERTGKGIARQLRSKGIIPCVIYKN-GQSTPVQIPTKELYTFMNIATREKLFVTL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGK 126 + + I +DYQ+DPV+ L+H DF++VS + V +PV I E G+KQ G Sbjct: 65 KLDGQEKQAILQDYQVDPVTGKLLHVDFMEVSATEKIRVTIPVVLIGE--PIGVKQDKGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 L E+ + IP I VD++ L++GD++H+ DI+ E +S Sbjct: 123 LQHGISEIEIEAIPEKIPGHIEVDVSHLEVGDAVHVSDIKFEEGIKVIS 171 >gi|254445745|ref|ZP_05059221.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] gi|198260053|gb|EDY84361.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] Length = 210 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 8/165 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD--ISKRLYSKNFMTTIL 65 ++A RD+ G S+ LR G++PA++YG P+ ++L A++ I R N L Sbjct: 32 INASNRDQAGSASSGRLRAEGRVPAVVYGKSKAPQNLSLDARELRILLRTIGNNTPVVQL 91 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 D G+ +I K+ Q P+ D H DF +V + + +PV I E + G+K + Sbjct: 92 KADDGEPRTSII-KEVQRHPIKDSYTHVDFQEVGADELIVLEIPVHPIGE--ADGVKNES 148 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G + V H VS+ C NIP SI D++ LK+GDS H+ +LPE Sbjct: 149 GTIETVSHTVSVRCLPKNIPASIDADVSALKVGDSFHVS--QLPE 191 >gi|312128896|ref|YP_003996236.1| lsu ribosomal protein l25p [Leadbetterella byssophila DSM 17132] gi|311905442|gb|ADQ15883.1| LSU ribosomal protein L25P [Leadbetterella byssophila DSM 17132] Length = 190 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 9/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K ++ R +G+ SA+ LR G +P I+YG I+ A R +YS + Sbjct: 2 KVTEIVGFKRANLGRQSAQELRAEGYVPGILYGGEEQ---ISFYAPAYLFRPVVYSIDAY 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 LT+D GKE I +D Q PV+D LIH D L+++ +T +PVR K G Sbjct: 59 EIKLTID-GKEY-RAILQDKQFHPVNDSLIHVDLLEINPDKVITTTIPVRLTGTAK--GA 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 KQGGKL +V + PA IP+ + +D+ +L +G SI ++ I LPE T Sbjct: 115 KQGGKLVQTLRKVRVKGPAKLIPEFVNLDVTELGLGKSIRVKSIELPELT 164 >gi|56961862|ref|YP_173584.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus clausii KSM-K16] gi|68053067|sp|Q5WAD7|RL25_BACSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56908096|dbj|BAD62623.1| ribosomal protein L25 family general stress protein [Bacillus clausii KSM-K16] Length = 218 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 90/161 (55%), Gaps = 6/161 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTIL 65 L+A R + LR G +P ++YG P+++ A K R +N + + Sbjct: 4 LNARERKDQKAHQTKELRNQGHVPGVLYGKKVKSTPVSVEAVAFLKTFRDVGQNGLFDLQ 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + GK HV+ ++ Q+DP+++ +H DF +V V+VPV E +PG K+GG Sbjct: 64 LENGGKH--HVMVQEVQIDPLNNQYMHVDFFEVDMNEERDVNVPVHL--EGDAPGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 +N + +E+++ C +IP+SITVD+++L IGDS+ + DIR Sbjct: 120 IVNHLLYEITVHCLPADIPESITVDISNLNIGDSLSVSDIR 160 >gi|325270437|ref|ZP_08137041.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] gi|324987233|gb|EGC19212.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] Length = 202 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 97/169 (57%), Gaps = 9/169 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALS----AKDISKRLYSK 58 KE K+S R +GK +++LLRK G +P +YG D KP+A+S ++ K +Y+ Sbjct: 2 KEIKVSGQKRTDLGKKASKLLRKEGLVPCNLYGEAHKDGKPVAVSFAAPMAELRKVVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+ V+ K+ Q PV+D L+H DF +V++ +T+ VPV+ + Sbjct: 62 HIYVIELVID-GESHTAVL-KELQFHPVTDALLHIDFYEVNDQKPITIGVPVKL--SGLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G++ GG++N+ ++++ P IP+ + +D+ L++G SI + ++ Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTGLQLGKSIKVGELSF 166 >gi|304382452|ref|ZP_07364950.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] gi|304336405|gb|EFM02643.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] Length = 207 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 10/163 (6%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALS----AKDISKRLYS 57 KE +S +R +GK +++LLRK G IP +YG + K P A S D+ K +Y+ Sbjct: 2 KEINVSGQVRTDLGKKASKLLRKEGLIPCNLYGEARNEKGLPEAFSFVIPMVDLRKLVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ +DI + I K+ Q PV+D L+H DF +++E +TV +PV+ Sbjct: 62 PHIY--VVNIDIDGKAHKAILKELQFHPVTDALLHVDFYEINEEKDITVGIPVKLT--GL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + G++ GG++N+ ++++ P IP+ + +D+ L+IG SI Sbjct: 118 AQGVRDGGRMNLSIRKINVRAPYKRIPEQLEIDVTPLQIGKSI 160 >gi|290959809|ref|YP_003490991.1| 50S ribosomal protein L25 [Streptomyces scabiei 87.22] gi|260649335|emb|CBG72450.1| 50S ribosomal L25 protein [Streptomyces scabiei 87.22] Length = 198 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 7/172 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KL A R + GKG+AR +R+ ++PA++YG+ +DP I L + L + N Sbjct: 1 MNMAEVKLEAETRTEFGKGAARRIRRASKVPAVVYGHGADPVHITLPGHALQLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+LDI + IPK Q D + L H D L V G V V V V + +PG Sbjct: 61 L---LSLDIDGKTQLAIPKAVQRDAIKGFLDHVDLLLVKRGEKVNVEVYVH-TEGDLAPG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L V +++ A +IP+S+TV + L+ G SI +DI LP+ T+ Sbjct: 117 AYL---LEHVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPKGTT 165 >gi|126439855|ref|YP_001057621.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 668] gi|166223668|sp|A3N5K0|RL25_BURP6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|126219348|gb|ABN82854.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668] Length = 204 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + G G++R LR G+ I+YG P+ I L + L + F ++IL Sbjct: 2 KVVAFERQQQGTGASRRLRNAGKTTGIVYGGEVAPQMIELDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 LEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSSA 121 Query: 127 LNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNIT 180 VV H E+ + C ++P+ + VDL+ ++ G S+H +DI LP T+ + N Sbjct: 122 --VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPV 179 Query: 181 IATIVAP 187 IA+ P Sbjct: 180 IASATIP 186 >gi|329941174|ref|ZP_08290453.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] gi|329299705|gb|EGG43604.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] Length = 197 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 6/167 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A R + GKG+AR +R+ ++P ++YG+ SDP + L ++ L + N + + Sbjct: 3 EVKLAAAKRTEFGKGAARRIRREDKVPGVLYGHGSDPIHLTLPGHELLLALRTPNVLIAL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 G+EL IPK Q DP+ L H D V G V V + V E +PG G Sbjct: 63 DIEGEGQEL--AIPKSVQRDPIKGFLEHVDLQLVQRGEKVNVEIYVNTEGE-LAPG---G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 L V + + + A +IP+S+TV + L GDS+ +DI LP T Sbjct: 117 NLLEHVLNTLPVEAEATHIPESVTVSVEGLAAGDSVLAKDIPLPSGT 163 >gi|283780445|ref|YP_003371200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] gi|283438898|gb|ADB17340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] Length = 208 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 97/180 (53%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ RDK+G + R LR G++PA++YG+ + +++++I + + L Sbjct: 6 LNVTKRDKLGTANNRRLRYTGKVPAVLYGHGEASISLTVASEEIWAAVKHGGKLVN-LKG 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + + + Q D S +IH D ++VS V+ + V + + G+ +GG L Sbjct: 65 DVTES---ALIRAVQWDVWSKEIIHIDLMRVSASEKVSTTIAVEL--KGTAAGLTEGGVL 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + HE+ +LCPA IP+ + V++N+L +G +IH ++ LP+ ++ ++ + + VAP Sbjct: 120 QFITHELEILCPAAEIPEKLIVNVNNLHLGKAIHANEVTLPKDGELVTPGSVVVVSCVAP 179 >gi|149203915|ref|ZP_01880883.1| ribosomal protein L25 [Roseovarius sp. TM1035] gi|149142357|gb|EDM30402.1| ribosomal protein L25 [Roseovarius sp. TM1035] Length = 208 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 3/183 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R GKG+AR R+ G +P +++G +P I + + KRL F +T+ L Sbjct: 8 LQAQERAGTGKGAARAARRAGMVPGVVFGGDKEPLAINIPFNALLKRLKKGRFKSTLFNL 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + V VI +D Q D V D+ H D +++ + + + + V FIN + +++GG Sbjct: 68 QVEGHDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINAEQCKALRKGGV 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 L VV EV L A +IPD +TVDL+ + KIGD + + + LP + + + I I Sbjct: 128 LTVVRPEVELNVLAGDIPDHVTVDLSKVEKIGDVVTISMVDLPAGSEPVIKDRDFVICNI 187 Query: 185 VAP 187 AP Sbjct: 188 SAP 190 >gi|312889384|ref|ZP_07748938.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] gi|311298261|gb|EFQ75376.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] Length = 194 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 93/165 (56%), Gaps = 7/165 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R+ VGK A+LLR G++PA++YG + +A+S D+ +Y+ + Sbjct: 2 KSITISGSPRESVGKRDAKLLRYEGKVPAVLYGGATQTH-LAVSVTDLKAVVYTP--VVH 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L++ + I KD Q P+++ +IH DFL++ VT+ +P+R SPG+K Sbjct: 59 FINLEVAGKTAQAIIKDIQFHPLTEEIIHVDFLELDAAKPVTIEIPIRLT--GTSPGVKT 116 Query: 124 GGKLNVVCHEVSL-LCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL ++ + P ++I D+I V + L++G S+ + D++L Sbjct: 117 GGKLVQKLRKLRIKALPGDHI-DNIDVSIATLEVGKSVRVSDLKL 160 >gi|322420138|ref|YP_004199361.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Geobacter sp. M18] gi|320126525|gb|ADW14085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M18] Length = 195 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +R + GKG R LR G++PA++YG +P I+L K++S+ + + ILTL Sbjct: 6 LNVEIRKETGKGICRRLRAAGRVPAVVYGKGMEPVSISLVQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 EL +VI D D + + H D +++ V VHV + + G+K GG Sbjct: 66 KGAGELEGANVIVADLLRDSLKNQPRHVDLHKINLADKVKVHVKLNLVG--TPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HEV + C +IP I V++ +L IG S+H+ DI P T+ +S + +I+ Sbjct: 124 FLDFAMHEVEVECLPVHIPAHINVEVAELTIGHSVHVSDIVAPVGTTIVSDPKAPVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|317486441|ref|ZP_07945268.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] gi|316922351|gb|EFV43610.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] Length = 192 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R +GKG+ R R+ IP + Y + P+ +S + +K L+S+ TT+ L Sbjct: 7 LSVQKRAGLGKGANRRARQEELIPGVFYTAKGENLPVQMSVRSFAK-LFSQVGRTTVFNL 65 Query: 68 DIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I + H V+ Q DP++ H DF V V + VPV F + G K GGK Sbjct: 66 EIEGDGTHPVLIWATQRDPITSRFTHIDFYGVDLDKPVKITVPVEFTGVAR--GTKVGGK 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L ++ L+ ++P +T+D++ + +G +I + D++LPE + N I +++ Sbjct: 124 LETYREQIQLMAKPLDMPAKVTIDISGMDVGTTIQIADVKLPEGVKAAYDNNYAIVSVLM 183 Query: 187 P 187 P Sbjct: 184 P 184 >gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Alicycliphilus denitrificans BC] gi|330823568|ref|YP_004386871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] gi|317116258|gb|ADU98746.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans BC] gi|329308940|gb|AEB83355.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] Length = 208 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 2 QFVAYERAKQGTGASRRLRISGKAPGIVYGGSAEPQMIEVDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG- 125 +++ ++ V+ +D Q P ++H DF +V + + V + VP+ + SP +K+ G Sbjct: 62 MELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVPLHYEGLEGSPAVKEEGC 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HEV ++C + +P+ ITVDL+ L + ++ +++P Sbjct: 122 TVTPLIHEVDVMCMPSQLPEFITVDLSGLTSKSAPGVQSLKIP 164 >gi|150020070|ref|YP_001305424.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho melanesiensis BI429] gi|166223727|sp|A6LJD8|RL25_THEM4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149792591|gb|ABR30039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosipho melanesiensis BI429] Length = 216 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 5 ECKLSAVMRDKVGKGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + KL A+ R+ VGK A R LRK G IP ++YG +P I++ ++ K LY + Sbjct: 3 QHKLEALTRNVVGKKRAVRRLRKQGLIPGVVYGPDIEPLSISIKKSNLIKLLYEVT-EAS 61 Query: 64 ILTLDI----GKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I++L + G E+ V K+ Q D ++D + H DF +G T+ +++P+ FI + K Sbjct: 62 IISLSVKDETGNEVFSHDVFIKNIQYDKLTDEVKHIDFYAPEKGHTMNINIPLEFIGKPK 121 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+++GG + ++ HE+ + + I + + +D+++L +G+S H+ D++LP ++ Sbjct: 122 --GVEKGGIVEIIHHELPVETLPSVIVEKLEIDISNLDLGESFHVSDLKLPTGMTAELPE 179 Query: 178 NITIATIVAP 187 N + TI P Sbjct: 180 NEPLVTIAIP 189 >gi|291298815|ref|YP_003510093.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] gi|290568035|gb|ADD41000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] Length = 205 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 15/188 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 E ++SA R + GKG AR R+ G+IPA++YG+ PK ++L A++ + R N + Sbjct: 3 EVRISAEPRTEFGKGGARRTRRAGKIPAVLYGHGEKPKHLSLPAREFAAVIRRGGLNQLV 62 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ D EL +PK Q DP+ D + H D L V +G VTV V + F E + G+ Sbjct: 63 SVEITDGTTEL--ALPKALQRDPIKDTIEHVDLLLVRKGEKVTVEVRIDFTGEPEKGGL- 119 Query: 123 QGGKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + H + L A IP+S+ + + +++G +I + LP T+ +S Sbjct: 120 -------IVHNLDTLTVEADATAIPESVELSIEGMEVGSNITAAAVNLPSGTTLVSDPET 172 Query: 180 TIATIVAP 187 + T P Sbjct: 173 VLVTHTQP 180 >gi|302519766|ref|ZP_07272108.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] gi|318061239|ref|ZP_07979960.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actG] gi|318075754|ref|ZP_07983086.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actF] gi|302428661|gb|EFL00477.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] Length = 197 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + I Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGAEPVHVTVPGHELMMALKTSNVLLAI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+ EL VIPK Q DP+ L H D L V G V V +PV +PG Sbjct: 63 -ELNGKNEL--VIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPV-LAEGELAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVS 163 >gi|325280762|ref|YP_004253304.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] gi|324312571|gb|ADY33124.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] Length = 190 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 101/190 (53%), Gaps = 11/190 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R +GK + LLR G++P ++YG + ++ KD+ K LY+ + I+ Sbjct: 5 ELQGELRTDLGKKATNLLRAEGKVPCVLYGGKENVH-FSVVEKDLQKLLYTP--VVYIVK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + + ++ Q PVSD ++H DF Q+SE V + VPV+ + + G++ GGK Sbjct: 62 VNVAGQSYEAVMREIQFHPVSDRVLHMDFYQISEDKPVIMEVPVKL--QGFAEGVQAGGK 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE------KTSSMSQLNIT 180 L++V ++ + N+P I +D+ +L +G SI ++D+ K ++Q+ +T Sbjct: 120 LSLVVRKLKVKAIPANLPGEIVLDVTNLGLGKSIKVKDLSFENFEIVNAKEVVVAQIKLT 179 Query: 181 IATIVAPISG 190 A A G Sbjct: 180 RAARAAAQEG 189 >gi|302877722|ref|YP_003846286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] gi|302580511|gb|ADL54522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] Length = 202 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 99/183 (54%), Gaps = 4/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 +A R G G++R LRK G +P ++YG+ + I ++ ++ +L +++F ++LT+ Sbjct: 5 FNATTRKTQGTGASRRLRKAGSVPGVVYGS-GEAVMIEMNHNELYYKLRAESFHASVLTM 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 ++ GKE V + + P + H DF +V + + VP+ FIN++ +P +K GG Sbjct: 64 NLDGKEEA-VQLRAFVNHPFRQQVQHLDFQRVDLSKKIHIKVPLHFINQDIAPAVKTGGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 K++ V E + C ++P I VDL +++G S+H+ +++LP + +V Sbjct: 123 KISHVMIEAEISCLPADLPAFIEVDLGGMQLGHSVHLGELKLPRGVELCAHGEHAAEAVV 182 Query: 186 API 188 A + Sbjct: 183 ATV 185 >gi|121593316|ref|YP_985212.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax sp. JS42] gi|222110037|ref|YP_002552301.1| 50S ribosomal protein l25/general stress protein ctc [Acidovorax ebreus TPSY] gi|166223657|sp|A1W4G1|RL25_ACISJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801044|sp|B9ME47|RL25_DIAST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120605396|gb|ABM41136.1| LSU ribosomal protein L25P [Acidovorax sp. JS42] gi|221729481|gb|ACM32301.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax ebreus TPSY] Length = 208 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 2 QFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ ++ V+ +D Q P ++H DF +V E + V + VP+ F S +K +G Sbjct: 62 MELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEGC 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ ++C +P+ I VDL+ L ++ ++ ++LP Sbjct: 122 TVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLP 164 >gi|238062583|ref|ZP_04607292.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] gi|237884394|gb|EEP73222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] Length = 230 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG AR R+ G +PA++YG+ PK IAL A++ + + K + Sbjct: 3 EVKISAEPRTEFGKGGARRTRRAGMVPAVLYGHGEKPKHIALPAREFAAAIR-KGGANQL 61 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ G +++ +PK Q DP+ D H D L V G VTV VPV+ E Sbjct: 62 FAIEVSDGTQVL-ALPKAIQRDPIKDSFEHVDLLLVRRGEKVTVEVPVQLTGE------- 113 Query: 123 QGGKLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 K ++ H+ +S+ A +PD + + L+ G + D+ LP Sbjct: 114 -AAKDTLIVHDHDTLSVTADATKVPDHLEASIEGLEAGTQVTAADVELP 161 >gi|332878587|ref|ZP_08446307.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683488|gb|EGJ56365.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 198 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 92/158 (58%), Gaps = 7/158 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ VGK +++ LR GQ+P ++YG D + + +Y+ N T T+++ + Sbjct: 11 RESVGKAASKALRNAGQVPCVLYGG-DDVLHFSAPELAFAGIVYTPNVYTA--TIEVNGK 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 I +D Q DPV+D +IH DF Q+++ +T+ VP++ + SPG+ GG L VV Sbjct: 68 SYTAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQI--QGTSPGVMAGGTLRVVNR 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 ++ + +N+PD I VD++ L++G+ +++ +LP++ Sbjct: 126 KLKIKALPDNLPDFIPVDISALEMGNRLYIT--KLPQE 161 >gi|319654945|ref|ZP_08009019.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] gi|317393370|gb|EFV74134.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] Length = 216 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 7/184 (3%) Query: 8 LSAVMRDKVGKGSARL----LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++AV++ K KGS LRK G IPA++YG+ + I LS D K + Sbjct: 1 MTAVLQAKERKGSRNSNLTSLRKEGNIPAVVYGSKLHSQSIYLSEADFLKTIKEVG-RNG 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +LD+ V+ DYQ +P+ + ++HADFL V +T V R + + G+K Sbjct: 60 VFSLDVDGSKHEVVLGDYQSNPIKNEIVHADFLAVDMNKEMTADV--RVVLTGDAAGVKD 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + HEVS+ NNIP S+ VD+ +L++ +++ + DI+ ++ IA+ Sbjct: 118 GGVMQQSMHEVSVTATPNNIPPSVEVDVTNLQVNETLTVADIKANRGYEINNEDEEVIAS 177 Query: 184 IVAP 187 I+ P Sbjct: 178 ILPP 181 >gi|147676447|ref|YP_001210662.1| 50S ribosomal protein L25/general stress protein Ctc [Pelotomaculum thermopropionicum SI] gi|226736346|sp|A5D632|RL25_PELTS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146272544|dbj|BAF58293.1| ribosomal protein L25 [Pelotomaculum thermopropionicum SI] Length = 209 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 5/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNFMTT 63 +L A R + + LR+ G IPA++YG IA+ A ++ K L N + Sbjct: 3 AELEAQARTEKTRSFTHSLREKGMIPAVVYGKNVGSLSIAVDAGELQKILEGAGSNALIR 62 Query: 64 ILTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + GK H V+ K+ Q DPV LIHADF QVS V VPV + G Sbjct: 63 MKIKENGKIRKHNVLVKEVQRDPVRRELIHADFHQVSLKDRVHATVPVHLTG--SAAGTV 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + V + C A+ IP++ITVD++ L+IGD+I + D+ LP ++ + Sbjct: 121 EGGVLTPLLRRVEMECLASEIPEAITVDVSGLRIGDTITVADLPLPPGVRALEDPEAPVV 180 Query: 183 TIVA 186 T+ A Sbjct: 181 TVTA 184 >gi|213962523|ref|ZP_03390785.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] gi|213954849|gb|EEB66169.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] Length = 199 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 95/164 (57%), Gaps = 15/164 (9%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-----NMSDPKPIALSAKDISKRLYSK 58 K + R+ VGK +++ LR GQ+P ++YG + S P+ L+ K+I +Y+ Sbjct: 2 KSITIKGSQRESVGKAASKALRNAGQVPCVLYGGDNVLHFSAPE---LAFKNI---VYTP 55 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N T + L+ GK I +D Q DPV+D +IH DF Q+++ +T+ VP++ E S Sbjct: 56 NVYTAAIELN-GKTY-DAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQI--EGTS 111 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 PGI GG L +V ++ + +N+PD + V+++ L++G+ +++ Sbjct: 112 PGIMAGGTLRIVNRKLKVKALPDNLPDFVPVNISGLEMGNKLYV 155 >gi|325971763|ref|YP_004247954.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] gi|324027001|gb|ADY13760.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] Length = 211 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 7/179 (3%) Query: 8 LSAVMR-DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTIL 65 L A +R + G AR L + +IPA+IYG ++P I L +++ + ++ ++F T +L Sbjct: 7 LKAELRTEDFGSAGARRLLRTKRIPAVIYGK-NEPVHIILDSREFTNKM--RHFSETALL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + +GK+ + KDYQ + + + H DF +V+ G + V + + + G K+GG Sbjct: 64 KISVGKKSYECLMKDYQENLMRAEIKHVDFFEVTRGQVLRTLVSI--VLKGNPVGTKEGG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V HEV + C ++P ++ D+ LKI S+H++D+ +P + L T+A++ Sbjct: 122 VLDQVMHEVEIECFPKDLPAALEADVTSLKINQSLHLKDVVIPANVKVLDDLAKTVASV 180 >gi|228472342|ref|ZP_04057108.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] gi|228276545|gb|EEK15269.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] Length = 198 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 92/155 (59%), Gaps = 9/155 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS--KRLYSKNFMTTILTLDIG 70 R+ VGK +++ LR G++P ++YG S I SA ++ K +Y+ N T T+++G Sbjct: 11 RESVGKAASKALRNAGKVPCVLYGGNST---IHFSADALAFKKLIYTPNVYTA--TIELG 65 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + + I +D Q DPV+D +IH DF ++ + +T+ VP++ + +PG+ GG L +V Sbjct: 66 GKTYNAILQDIQFDPVTDNIIHVDFYELHKDKEITLAVPIQIVGT--APGVMAGGTLRIV 123 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++ + N+PD + VD++ +++G+ +++ I Sbjct: 124 NRKLKVKALPENLPDFVPVDISWMEMGNRLYITKI 158 >gi|182414101|ref|YP_001819167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] gi|177841315|gb|ACB75567.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] Length = 272 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 93/163 (57%), Gaps = 5/163 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R + G+ ++R LRK ++PAI+YG + P+ +++ A + ++ L + T ++ Sbjct: 6 QLNVASRAQTGRSASRRLRKTNRVPAILYGKHTSPESLSVDAPEFTRLLKTIGARTVLVE 65 Query: 67 LDIGKELVHVIP--KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L + + ++ Q DP++D +H DF +V +HV VR + E S G+K Q Sbjct: 66 LQQAGKTDKALSFLQEVQRDPMTDKFVHIDFQEVKADEKFEIHVTVRPVGE--SFGVKNQ 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 G L + HE+ + C ++P+++ VD+ +LK+G++I + ++ Sbjct: 124 SGVLELNVHELRIRCLPKDLPEAVEVDVTELKVGETIKLGQLK 166 >gi|297157756|gb|ADI07468.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces bingchenggensis BCW-1] Length = 193 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 7/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR R+ G +P ++YG+ ++P + L D+ L + N + Sbjct: 3 EVKISAKSRTEFGKGAARRDRREGLVPGVVYGHGAEPVHVNLPGHDLMLALKTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LDI + VIPK Q D + L H D L V G VTV V V+ E +PG G Sbjct: 60 LGLDIEGKKELVIPKAIQRDAIKGFLKHVDLLLVKRGEKVTVEVRVQTEGE-LAPG---G 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + + + + A +IP+S+TV + L G SI +DI LP T+ + + + + Sbjct: 116 NLLEHLLNALPVETEATHIPESVTVSIAGLDAGHSILAKDITLPAGTTLAVEEDTVVLQV 175 Query: 185 VA 186 V Sbjct: 176 VG 177 >gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata obscuriglobus UQM 2246] Length = 216 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + G +A LRK G +PAI+YG+ +A++AK++ + + ++ +L L Sbjct: 7 LKTTARAETGSRAAARLRKQGLVPAIVYGHKQANVSLAVNAKELDQAIRVQH--ARVLDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + V+ ++ Q D + +IH DF + V V VPV N K+ G GG L Sbjct: 65 DIEGKTETVLIRELQWDYLGKEMIHVDFERKDRAELVRVSVPVALKNAPKATG---GGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + H + + CP IP+SI +D+ +L +G IH+ D+ LP Sbjct: 122 DQPFHALHVECPLGAIPESIAIDITNLTLGHPIHIRDLALP 162 >gi|284033576|ref|YP_003383507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] gi|283812869|gb|ADB34708.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] Length = 214 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 13/185 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R + GKG+AR +R++ ++PA++YG+ +DP I L D L + N + Sbjct: 3 EVKIQAESRTEFGKGAARRIRRDNKVPAVLYGHGTDPVHITLPGHDTMLALKTAN---AL 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L +++ G E + +PK Q DP+ + + H D + V G V V + V + S + Sbjct: 60 LLIEVEGSESLLALPKQVQRDPIKNFIEHVDLVIVKRGEKVQVDIAVHLEGDAASETL-- 117 Query: 124 GGKLNVVCHEVSLL--CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 VV S+L A +IPD +TV + L G IH D++LP T+ + + I Sbjct: 118 -----VVLENASILVEAEATHIPDGVTVSIEGLDAGAQIHASDLQLPAGTTLAVEPDTLI 172 Query: 182 ATIVA 186 + A Sbjct: 173 VNVTA 177 >gi|34540029|ref|NP_904508.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis W83] gi|188994143|ref|YP_001928395.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis ATCC 33277] gi|71153158|sp|Q7MXK8|RL25_PORGI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736349|sp|B2RHF3|RL25_PORG3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34396340|gb|AAQ65407.1| ribosomal protein L25 [Porphyromonas gingivalis W83] gi|188593823|dbj|BAG32798.1| putative 50S ribosomal protein L25 [Porphyromonas gingivalis ATCC 33277] Length = 192 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 4/181 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +L+ R + GK +A+ +RK QIPA++YG + +S + +YS Sbjct: 2 KTFQLTGTPRAEFGKKAAKAIRKEDQIPAVLYGGKGEGVNFIVSQDAVRNLIYSPEIFLV 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 LT++ G I K+ Q PV+D +IH DFLQV++ V + VPV + + G+K Sbjct: 62 ELTVE-GSGSYKAILKEIQFHPVTDRIIHIDFLQVTDEKPVVMEVPV--VLTGHAEGVKA 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GGKL++ ++ + + IP+ + +D++DL++G +I + ++ E + M+ N + Sbjct: 119 GGKLSLEMRKLKVKALYSEIPEKLDIDVSDLQLGKTIQVGELHF-EGLTLMNAKNAVVCA 177 Query: 184 I 184 + Sbjct: 178 V 178 >gi|189218769|ref|YP_001939410.1| ribosomal protein L25 [Methylacidiphilum infernorum V4] gi|189185627|gb|ACD82812.1| Ribosomal protein L25 [Methylacidiphilum infernorum V4] Length = 219 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 8/189 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R VGK + + LR IPAI+YG + P+ +SA + + K +L L Sbjct: 7 LRASIRKAVGKSAVKKLRSKDNIPAILYGKKTL-LPLEISATEFKNLFHGKRVEKVLLNL 65 Query: 68 DIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +I K+ ++ QL P++D L+H D ++S V + + F+ E +S +K Sbjct: 66 EIAADQEKKSTLAFLQEIQLHPITDKLLHLDLHELSADEKVHAEIDLVFLGEPQS--LKS 123 Query: 124 G-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G L++ + + C ++PDSI V++ LK G+SIH+ DI LP SM+ N + Sbjct: 124 GTANLDISLRRLKISCFPKDLPDSIQVEIGHLKTGESIHVGDIPLPPGVESMNPKNQVVL 183 Query: 183 TIVAPISGS 191 ++VA G Sbjct: 184 SLVAAKGGE 192 >gi|261880168|ref|ZP_06006595.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] gi|270333139|gb|EFA43925.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] Length = 217 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 103/186 (55%), Gaps = 10/186 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSA----KDISKRLYSK 58 KE L+ R +GK +++ LRK G IP +YG + KP+A + K++ K +Y+ Sbjct: 2 KEISLTGKKRVDLGKKASKTLRKEGLIPCNLYGEAKENGKPVATAFVSPFKELRKLIYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++LD G+E ++ K+ Q PV+D +H DF +V++ +T+ +PV+ + + Sbjct: 62 HIYVIKISLD-GEEHTAIM-KEIQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLVG--LA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG++N+ ++ + P IP+ + +D++ L IG SI + D+ E + N Sbjct: 118 QGVRDGGRMNLSIRKIEVTAPYQQIPEHLDIDVSKLTIGKSIRVGDLSY-EGLKYATSKN 176 Query: 179 ITIATI 184 + I +I Sbjct: 177 VVICSI 182 >gi|239930784|ref|ZP_04687737.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces ghanaensis ATCC 14672] Length = 193 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 6/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N + + Sbjct: 3 DVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNVLIEL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +D GKE IPK Q DP+ L H D L+V G V V +PV+ E +PG G Sbjct: 63 L-ID-GKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGE-LAPG---G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L V + + A IPD +TV + L+ G S+ +DI LPE Sbjct: 117 NLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPE 161 >gi|218961881|ref|YP_001741656.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] gi|167730538|emb|CAO81450.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] Length = 188 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 7/166 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTILTLDIGKELVHVIPKDYQ 82 LR +G IPA+IYG + +++ D + +LY K+F + +++ + H I KD Q Sbjct: 4 LRASGMIPAVIYGPELESISVSIPKGDFT-QLYKKSFAEVSFWDIELNGDQFHTILKDKQ 62 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 + PV+ ++H DF+ VS + + V VP+ E G+K+GG + +V V + C AN Sbjct: 63 IHPVTREMLHLDFMVVSAEAIIEVEVPIIITGE--PIGVKEGGMMEIVQRNVKISCKANE 120 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIATIVAP 187 IPD +T+D+++LKIG+S+H+ D LP+ + + ++T+ I AP Sbjct: 121 IPDELTLDVSNLKIGESLHIRD--LPKGNWEVKEHSDVTLVAIHAP 164 >gi|86134892|ref|ZP_01053474.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] gi|85821755|gb|EAQ42902.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] Length = 206 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 9/156 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK + + LR G +P +IYG + PI SA++ + + +Y+ N Sbjct: 2 KSITIKGSKRESVGKAATKALRNAGMVPCVIYGGET---PIHFSAEEKAFKNLVYTPNVY 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T +L++ E + I +D Q PVSD ++H DF Q+ + VT+++PV+ SPG+ Sbjct: 59 TA--SLEVDGEKIPAILQDIQFHPVSDKILHVDFYQLFDDKEVTMNIPVQLT--GTSPGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG 157 GG L ++ + N+PD IT D++ LKIG Sbjct: 115 LNGGSLRFTNRKLKVKAIPANLPDFITADISKLKIG 150 >gi|291514751|emb|CBK63961.1| ribosomal protein L25, Ctc-form [Alistipes shahii WAL 8301] Length = 190 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + AV R GK +A+ +R+ G +P ++ GN + + ++ ++I +Y+ N + Sbjct: 2 KTISVKAVKRADFGKKAAKAIRREGMVPCVLCGN-GETETFSVDPREIKPLIYTPN--SY 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ DI + + ++ Q PV + ++H DF +++EG V++ +PVR + G+K Sbjct: 59 IVEFDIEGKKEQAVLREAQFHPVREEILHLDFYRIAEGKPVSIAIPVRLTG--NAEGVKV 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL + ++ + N+PD I VD+ +L +G +I + D+ Sbjct: 117 GGKLALSARKLVVSALVENLPDEIVVDVTELGVGKTIFVGDLEF 160 >gi|296271108|ref|YP_003653740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] gi|296093895|gb|ADG89847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] Length = 190 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 8/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++A R GKG+AR LR+ G++PA++YG+ ++PK + L D+ L + N + Sbjct: 3 EVVINAEPRTAFGKGAARKLRRGGKVPAVLYGHGTEPKHLTLPGHDLLLALRTPNVLIR- 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L D E+ +PK Q DP+ L H D L+V G VTV +PV + I + Sbjct: 62 LKGDGIDEI--ALPKGVQRDPIKGFLQHVDLLRVHRGEKVTVELPVTVTGDPIGSAIVE- 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +L V V + A +IP+S+ VD+ +G ++H D+ LPE S Sbjct: 119 -QLLVA---VPVEAEATHIPESVEVDVTGKDVGFTVHARDLALPEGVS 162 >gi|229819486|ref|YP_002881012.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] gi|229565399|gb|ACQ79250.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] Length = 214 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 7/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R + GKG+AR LR+ QIPA++YG+ +DP ++L + L L+ Sbjct: 5 ITATRRTEFGKGAARRLRRANQIPAVLYGHGTDPVHLSLPWHETFLALKGSANALLELSF 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D EL + KD Q DPV + H D L V G VTV VP+ + E+ +PG Sbjct: 65 DDASEL--ALAKDVQRDPVKGRIEHLDLLLVRRGERVTVEVPIHVVGES-APGTIH---- 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +++ A ++P+ ITVD+ L+ G + + D+ LP T + + + I P Sbjct: 118 TVDMQTLTVHAEATHLPEQITVDVEGLEDGTVVRVSDLVLPSGTDTDVDGEVPVVAISTP 177 >gi|288803707|ref|ZP_06409136.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] gi|288333796|gb|EFC72242.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] Length = 201 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 96/167 (57%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALS----AKDISKRLYSK 58 KE K++ R +GK +++ LRK G IP +YG D KP+A S ++ K +Y+ Sbjct: 2 KEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+ V+ K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 62 HIYVVELIID-GERRTAVL-KELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGEL 164 >gi|196229514|ref|ZP_03128379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] gi|196226746|gb|EDY21251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] Length = 281 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 100/189 (52%), Gaps = 7/189 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ KL+A+ R + G+ + +++ G +PA++YG P ++++A++I L Sbjct: 3 KQQKLTALTRTETGRSAVNKIKQQGLVPAVVYGGKEQPINLSVNAREIRNILAHATSEHF 62 Query: 64 ILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I K + ++ Q DP+ ++H DF V + +PV + E Sbjct: 63 LVDLEIADGSNKSNRLALVQEVQHDPLKGDVLHVDFHAVKADEKLHAEIPVETVGE--PA 120 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG L + H + + C ++P+ IT+D++ L +G+ IH++DI+ PE ++ Sbjct: 121 GVKNYGGILEISMHAIEVECLPKDLPEIITLDVSALNVGEGIHIKDIKFPEGVTTHVDGE 180 Query: 179 ITIATIVAP 187 +T+ + AP Sbjct: 181 LTVVRVSAP 189 >gi|158319104|ref|YP_001511611.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139303|gb|ABW17615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 191 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 3/173 (1%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R VGK S+ LR+ G +PA+IYG+ + PI L ++ + + + N ++TL+I + Sbjct: 9 VRKNVGKNSSHRLREKGYVPAVIYGSNINTIPIELDHNEVQECIRNNN-GGGLVTLNIDE 67 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 V K+ Q DPV+ +IH DF QV + + V VP+ I + KS + G L Sbjct: 68 NDYTVFIKEIQKDPVTGNIIHLDFQQVDQNEKIHVLVPI--ILKGKSNIKRSGSILQQQL 125 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ + C ANNIP ++ VD++ K GD++ + D+ E+ S + IA++ Sbjct: 126 RDLEVECSANNIPKALEVDISHFKPGDTLKVGDVEFGEEISIVHDAESIIASV 178 >gi|299135706|ref|ZP_07028890.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] gi|298601830|gb|EFI57984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] Length = 225 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 4/169 (2%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHV 76 KG AR +R +G IPA++YG + + + + I+K LYS++ TI L I GK V Sbjct: 20 KGHARRVRVSGLIPAVVYGAGQESVAVTVDPRVITKILYSESGHNTIFDLAIEGKGTNKV 79 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK-LNVVCHEVS 135 + D+Q +P+ L+H D +++ + V VPV+ I G+K GG L V HEV Sbjct: 80 MIVDWQHEPIKGKLLHIDLKRIAMDKAMRVSVPVQLIG--VPVGVKTGGGVLGQVLHEVE 137 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + C +IPD I +D+ +L+I +IH+ D+ +K + + + +A + Sbjct: 138 VECLPGDIPDHIDIDVANLEINGAIHISDLPHSDKLKFLGEEDALVAHV 186 >gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 210 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 4/181 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+A R++ + S R +R+ G IP ++YG + I++ AK++ K L S N T+ Sbjct: 3 EAMLNANPREERTRSSLRQIREQGGIPGVLYGKQTGSMAISVDAKELKKILGSVNGRNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQ 123 + +++ VI K Q+D + + H DF +VSE + + VPV + +P G+ Sbjct: 63 INMNVNGAKRTVIVKSLQMDHLHRGIQHVDFQEVSENTKIRTVVPVHLVG---TPIGVTH 119 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + V + C + IP+ I VD+++L+IGD++ + D+ LP + + T+ Sbjct: 120 GGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVLDHPHTTVVG 179 Query: 184 I 184 + Sbjct: 180 V 180 >gi|46579985|ref|YP_010793.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. Hildenborough] gi|120602603|ref|YP_967003.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris DP4] gi|71153142|sp|Q72BR0|RL25_DESVH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223678|sp|A1VDR0|RL25_DESVV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46449401|gb|AAS96052.1| ribosomal protein L25 [Desulfovibrio vulgaris str. Hildenborough] gi|120562832|gb|ABM28576.1| LSU ribosomal protein L25P [Desulfovibrio vulgaris DP4] gi|311234017|gb|ADP86871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris RCH1] Length = 190 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 7/186 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS RD +GKG+ R LR +P + Y + + + AK + K L+ + TT+ L Sbjct: 7 LSVQKRDNLGKGANRRLRSEEVVPGVFYDTKGNNVAVQMPAKPLQK-LFEEVGRTTVFQL 65 Query: 68 DI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +I GK+ H V+ D P H DF V + + VP+ F+ ++ G+K Sbjct: 66 EIEEEGKKSTHPVLIWDALFHPYKKKFTHIDFFGVDLDREIKIRVPLEFVGTSR--GVKL 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GGKL V + ++ +P IT+DL +L I +I ++D+ +PE + N I + Sbjct: 124 GGKLEVYREFIDVMSKPLTLPKKITLDLTELDINSTIMLKDVAMPEGVRPATNENFAILS 183 Query: 184 IVAPIS 189 ++ P S Sbjct: 184 VLTPKS 189 >gi|294506808|ref|YP_003570866.1| 50S ribosomal protein L25 [Salinibacter ruber M8] gi|294343136|emb|CBH23914.1| 50S ribosomal protein L25 [Salinibacter ruber M8] Length = 260 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 8/174 (4%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELV 74 + G +AR +R N ++P ++YG + P+ + ++K +Y ++ + +++ + Sbjct: 41 ETGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRS--APVAEVEMNGDTW 98 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 + I KDY L P++D +HADF + EG VT+ VP+ + G + GG + E+ Sbjct: 99 NCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYT--GIPVGQQNGGDTQQIAREL 156 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITIATIVAP 187 ++ NIP I VD+ +L IGDS+H+ D+ E +S Q T+ T+VAP Sbjct: 157 TISVLPENIPAQIEVDIGELVIGDSLHVYDLETDYEIKTSRDQ---TLVTVVAP 207 >gi|269219243|ref|ZP_06163097.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] gi|269211390|gb|EEZ77730.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] Length = 200 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 19/168 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ R GKG++R LR++G+ PA++YG+ SDP I+ + +I L +K ILT Sbjct: 4 KIQVDRRKSFGKGASRQLRRDGRTPAVVYGHGSDPVHISFDSHEIF--LATKGQANPILT 61 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ GKE + V+ K+ Q +P++ I+ H D L+V +G V V VPV E+ PG Sbjct: 62 IELEGKEQL-VLVKELQRNPLTRIIEHLDLLRVKQGEKVDVEVPVEVTGES-FPG----- 114 Query: 126 KLNVVCHEVSLL-----CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 H V L+ PA IP++I VD+ K G+++ + D+ P Sbjct: 115 ----TIHTVELMHVLVKAPATAIPEAIVVDVEGRKDGENVTVADLTFP 158 >gi|288799717|ref|ZP_06405176.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] gi|288332965|gb|EFC71444.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] Length = 199 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 95/162 (58%), Gaps = 9/162 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALS----AKDISKRLYSK 58 KE L+ +R +GK +++ LRK G IP +YG +D KP A S ++ K +Y+ Sbjct: 2 KEINLTGQLRSDLGKKASKSLRKEGLIPCNMYGIATTDGKPSAFSFTVPMTELRKLIYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + LT+D GK L I K+ Q PV+D ++H DFL+V+E +T+ +PV+ + + Sbjct: 62 HIYLVNLTVD-GK-LHTAILKEIQFHPVTDSVLHVDFLEVNEEKPITIGLPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 GI+ GG++++ ++++ P ++P+ + VD+ L IG SI Sbjct: 118 QGIRDGGRMSLSLRKLNVKAPYKSLPEHLDVDVTALTIGKSI 159 >gi|302345747|ref|YP_003814100.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] gi|302149597|gb|ADK95859.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] Length = 201 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 96/167 (57%), Gaps = 9/167 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALS----AKDISKRLYSK 58 KE K++ R +GK +++ LRK G IP +YG D KP+A S ++ K +Y+ Sbjct: 2 KEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+ V+ K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 62 HIYVVELIID-GERRTAVL-KELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGEL 164 >gi|84497834|ref|ZP_00996631.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] gi|84381334|gb|EAP97217.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] Length = 228 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R K GKG+AR +R++ +IPA++YG+ S+P I L D L + N + TI+ Sbjct: 7 KLQAQARTKFGKGAARQIRRDHKIPAVMYGHGSEPVHITLMGHDAMMALKNPNALLTIV- 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD ++L + KD Q DP+ ++ H D + V +G VTV V V E + Sbjct: 66 LDGAEQL--ALAKDVQRDPIKPVIEHIDLVIVRKGEKVTVDVNVHLEGEAAPETV----- 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +++ + L A NIP+S+TV + L+ G I I LPE + ++ + + Sbjct: 119 VSLDNSSIQLEVEATNIPESVTVSVEGLEAGTQILAGAIELPEGATLITDAEALVVNVTQ 178 Query: 187 PIS 189 IS Sbjct: 179 QIS 181 >gi|167753867|ref|ZP_02425994.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] gi|167658492|gb|EDS02622.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] Length = 191 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ AV R+ GK +A+ +R+ GQIPA++YG + ++ ++I +Y+ N + Sbjct: 2 KTIQVKAVKRENYGKKAAKAVRREGQIPAVLYGG-GETVSFSVDPREIKPLIYTPN--SY 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L+I + + +D Q P+ + ++H DF +V G V + +PVR + G+K Sbjct: 59 IVDLEIDGKTEKAVLRDVQFHPIREEILHMDFYRVQPGKPVAISIPVRLTGN--AEGVKI 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL + ++++ + +PD + +D+ L +G +I + D+ Sbjct: 117 GGKLVLSARKLTVSAQLDKLPDELVIDVTPLGVGKTIFVGDLNF 160 >gi|83816854|ref|YP_444950.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] gi|109893393|sp|Q2S4D1|RL25_SALRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83758248|gb|ABC46361.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] Length = 250 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 8/174 (4%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELV 74 + G +AR +R N ++P ++YG + P+ + ++K +Y ++ + +++ + Sbjct: 31 ETGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRS--APVAEVEMNGDTW 88 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 + I KDY L P++D +HADF + EG VT+ VP+ + G + GG + E+ Sbjct: 89 NCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYT--GIPVGQQNGGDTQQIAREL 146 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITIATIVAP 187 ++ NIP I VD+ +L IGDS+H+ D+ E +S Q T+ T+VAP Sbjct: 147 TISVLPENIPAQIEVDIGELVIGDSLHVYDLETDYEIKTSRDQ---TLVTVVAP 197 >gi|160900866|ref|YP_001566448.1| 50S ribosomal protein L25/general stress protein Ctc [Delftia acidovorans SPH-1] gi|226736305|sp|A9BP18|RL25_DELAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160366450|gb|ABX38063.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Delftia acidovorans SPH-1] Length = 209 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 89/163 (54%), Gaps = 1/163 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG ++ + I + + L + F ++IL Sbjct: 2 QFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSILD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ + V+ +D Q P +++H DF +V + + V + VP+ F +S +K + Sbjct: 62 MEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVENC 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ ++C +P+ ITVDL+ L ++ ++ ++LP Sbjct: 122 TITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGLKLP 164 >gi|260591411|ref|ZP_05856869.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] gi|260536603|gb|EEX19220.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] Length = 200 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 93/162 (57%), Gaps = 9/162 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALS----AKDISKRLYSK 58 KE K++ R +GK +++ LRK G +P +YG D KP+ALS ++ K +Y+ Sbjct: 2 KEIKVAGQKRTDLGKKASKQLRKEGLVPCNLYGEAQKDGKPLALSFTASMAELRKLVYTP 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L +D G+ V+ K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 62 HIYVVELVID-GERHTAVL-KELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 G++ GG++N+ ++++ P IP+ + +D+ +L +G SI Sbjct: 118 QGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTNLHLGKSI 159 >gi|21674184|ref|NP_662249.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium tepidum TLS] gi|71153133|sp|Q8KCQ1|RL25_CHLTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21647347|gb|AAM72591.1| general stress protein Ctc [Chlorobium tepidum TLS] Length = 199 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E + +V +V K A LR+ GQ+PA++Y I++ ++K ++S Sbjct: 2 ETRALSVNLREVKKNGAAKLRRLGQVPAVVYHKGEATVAISVEEISLNKLVHSSESHMID 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L GK + I KD Q DPV+D +IHADF S V + VP+ E + PG+K Sbjct: 62 LQYPDGKSVRSFI-KDVQFDPVTDRVIHADFQLFSTDEVVEMEVPIHL--EGECPGVKIG 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNITI 181 GGK+ + H + L +P+ T+D++ L++G ++H+ D++ PE + + ++ Sbjct: 119 GGKIQINVHTLPLKGKPEAMPEHFTIDVSALELGQTLHIRDLQAIAPEGVQILGDADTSV 178 Query: 182 ATIVAP 187 ++VAP Sbjct: 179 VSVVAP 184 >gi|313817232|gb|EFS54946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA2] gi|314961283|gb|EFT05384.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA2] gi|315086371|gb|EFT58347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA3] Length = 205 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 9/166 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L++ Sbjct: 7 LKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLLSI 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G++ + +PKD Q D + + H D L V G V V+V +R E+ +PG + Sbjct: 64 EIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGES-APGTIAMTE 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 N + + LL NIP+ I +D+ L+ G +I++ D++LPE TS Sbjct: 123 FNEIEVQADLL----NIPEVIEIDVTGLEAGTTIYLGDLKLPEGTS 164 >gi|152965021|ref|YP_001360805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] gi|151359538|gb|ABS02541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] Length = 209 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 8/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R GKG+AR +R+ +IPA++YG+ P + L + L + N + Sbjct: 3 ETKLTAEVRTSFGKGAARTIRRASKIPAVVYGHGEAPVHVTLPGHETMIALRNSNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +D+ V+PKD Q DP+ + H D L V G VTV VP+ + + +P Sbjct: 60 LDIDVDGTSHLVLPKDVQRDPIKGFIEHVDLLVVRRGEKVTVDVPLH-VEGDAAPETVVQ 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +LN +S+ A IP ++TV + L G + D+ LPE T+ Sbjct: 119 QELNT----LSVEADAAAIPTAVTVSVEGLTAGTHVAASDVTLPEGTT 162 >gi|261405174|ref|YP_003241415.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281637|gb|ACX63608.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 191 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 5/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + K + LR +G+IPA+++G + I LSAK+ K +++N IL Sbjct: 3 VNLRAEARAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGK--WARNGKGGIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +E + V+ + Q DPV+ IH DFL+++ V V + +I K G K G Sbjct: 61 ELHFEDREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIGTAK--GAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + V + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++ Sbjct: 119 GVVQIQSTFVEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSV 178 Query: 185 VAP 187 V P Sbjct: 179 VTP 181 >gi|313886398|ref|ZP_07820120.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332299899|ref|YP_004441820.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] gi|312924144|gb|EFR34931.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332176962|gb|AEE12652.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] Length = 211 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 96/164 (58%), Gaps = 7/164 (4%) Query: 4 KECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K KLSA +R D++GK + + LR G +P ++YG S+ + + + A DI+K +Y+ + Sbjct: 2 KHFKLSATVRKADQLGKKATKGLRSEGLVPVVLYGG-SETQHLIVKADDINKLIYTPDIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + V + K+ Q PVSD +HAD +VSE + + VPV + + + G+ Sbjct: 61 --LIELDIEGKQVKAVLKEVQFHPVSDKTLHADLYEVSEDKPIVMSVPV--VLDGHAVGV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + GGKL + + + IP+++ +D+ +LK+G +I + ++ Sbjct: 117 RAGGKLVREKRNLRVRAIYDKIPETLVIDVTNLKLGKTIQVHEL 160 >gi|333026424|ref|ZP_08454488.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] gi|332746276|gb|EGJ76717.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] Length = 197 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + I Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSNVLLAI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+ EL VIPK Q DP+ L H D L V G V V +PV +PG Sbjct: 63 -ELNGKNEL--VIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPV-LAEGELAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L V + + + A +IP+ +TV + L+ G SI +DI LP+ S Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIELPKGVS 163 >gi|72160820|ref|YP_288477.1| 50S ribosomal protein L25/general stress protein Ctc [Thermobifida fusca YX] gi|109893401|sp|Q47SW3|RL25_THEFY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71914552|gb|AAZ54454.1| LSU ribosomal protein L25P [Thermobifida fusca YX] Length = 194 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG+AR R+ G++PA++YG+ P+ I L D+ L + N + + Sbjct: 3 EVRIAAEPRTEFGKGAARRARRAGKVPAVLYGHGIAPRHINLPGHDLMLALKTPNVLLRL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +D + L V+PK Q DP+ L H D L V G V V VP+ E + G Sbjct: 63 EGVDEKESL--VLPKSVQRDPIKGFLEHVDLLVVQRGEKVVVEVPLLVKGE-----VGAG 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G LN+ + + A IP+ I VD++ L IG ++ D++LPE Sbjct: 116 GVLNLEMAQAEVRAEATRIPEGIEVDVDGLPIGTNVTAGDLKLPE 160 >gi|326334560|ref|ZP_08200771.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693329|gb|EGD35257.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 200 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 92/156 (58%), Gaps = 9/156 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG--NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG 70 R+ VGK +++ LR G++P ++YG N AL+ K++ +Y+ N T T+++G Sbjct: 11 RESVGKAASKALRNAGKVPCVLYGGDNTIHFSADALAFKNL---VYTPNVYTA--TIELG 65 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + I +D Q DPV+D +IH DF Q+ + +T+ VP++ + +PG+ GG L VV Sbjct: 66 GKTYTAILQDIQFDPVTDKIIHVDFYQLHKDKEITLAVPIQIVGT--APGVIAGGTLRVV 123 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 ++ + +N+PD + +D++ +++G+ ++ I+ Sbjct: 124 NRKLKVKSLPDNLPDFVPIDISWMEMGNRFYVTKIK 159 >gi|134097416|ref|YP_001103077.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|291004594|ref|ZP_06562567.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|133910039|emb|CAM00151.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] Length = 208 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 13/168 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+ R + GKG+AR R+ G++PA++YG+ SDPK ++L A + + R +N + Sbjct: 3 EVRLTVEPRTEFGKGAARRTRRAGKVPAVLYGHGSDPKHLSLPAVEFA-RAIRENGHNAV 61 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 LTLD+ G + K P+ + + H D L V G VTV+VPV E PG Sbjct: 62 LTLDVAGSNSELALTKTITTHPIKNYIEHVDLLLVQRGEKVTVNVPVVLTGE-AGPG--- 117 Query: 124 GGKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V HEV+ L A +IP+ + + ++G I +I LP Sbjct: 118 ----TLVTHEVTELSVEAEALHIPEQFEISIEGAEVGTQITASEIVLP 161 >gi|302542981|ref|ZP_07295323.1| ribosomal protein L25, Ctc-form [Streptomyces hygroscopicus ATCC 53653] gi|302460599|gb|EFL23692.1| ribosomal protein L25, Ctc-form [Streptomyces himastatinicus ATCC 53653] Length = 199 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 7/184 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R + GKG+AR R ++P ++YG+ ++P + L A D+ L + N + Sbjct: 3 EVKIPAKPRTEFGKGAARRTRMADRVPGVVYGHGAEPLHVTLPAYDLLMALKTPNVLLR- 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L ++ GK + VIPK Q P+ IL H D L VS+G VTV +P+ + + +PG Sbjct: 62 LEVEGGKSEL-VIPKAVQRHPIKIGILEHVDLLLVSKGEKVTVELPIN-VEGDLAPG--- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 L V + + + A +IP+ +T+ + L GD+++ +DI LP+ T+ + + + Sbjct: 117 ANLLEYVLNTLPVETEATHIPEGVTISIAGLDAGDTVYAKDISLPKGTTLAVEDDAPVLH 176 Query: 184 IVAP 187 IV P Sbjct: 177 IVTP 180 >gi|226939244|ref|YP_002794315.1| Ctc [Laribacter hongkongensis HLHK9] gi|254801052|sp|C1DBA9|RL25_LARHH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226714168|gb|ACO73306.1| Ctc [Laribacter hongkongensis HLHK9] Length = 185 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 1/164 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++ A R G ++R LR+ G +P ++YG I+ + L + F ++IL Sbjct: 4 EIQAQQRADQGSSASRRLRRAGVVPGVVYGAGKAAVAISFDHNTLYYALQKEGFHSSILN 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L I V +D Q+ + H DF +V + + VP +FIN SP +K GK Sbjct: 64 LVIDGATEQVFVRDVQMHAFKPQVQHIDFQRVDANTVIEAKVPFKFINGEISPAVKMNGK 123 Query: 127 -LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + + + + C N+P +I VDL+ L G+S+H+ I+LPE Sbjct: 124 IIGHLLNAAVVRCLPANLPAAIEVDLSTLVAGESVHLSSIKLPE 167 >gi|29830106|ref|NP_824740.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces avermitilis MA-4680] gi|71153666|sp|Q82HE6|RL25_STRAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29607216|dbj|BAC71275.1| putative ribosomal protein L25 [Streptomyces avermitilis MA-4680] Length = 197 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A R + GKG+AR +R+ ++PA++YG+ ++P I L ++ L + N + Sbjct: 3 EVKLAAEPRTEFGKGAARRIRRESKVPAVVYGHGAEPVHITLPGHELLLALRTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+LDI + IPK Q D + L H D L V G V V V V + +PG Sbjct: 60 LSLDIEGKAQLAIPKAVQRDAIKGFLEHVDLLLVRSGEKVNVEVYVH-TEGDLAPGAYL- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L V +++ A +IP+S+TV + L+ G SI +DI LP T+ Sbjct: 118 --LEHVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPSGTT 163 >gi|89890034|ref|ZP_01201545.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] gi|89518307|gb|EAS20963.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] Length = 211 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R+ VGK + + LR G +P +IYG +P K +Y+ + MT Sbjct: 2 KSITINGSKRESVGKKATKALRNAGLVPCVIYGG-DEPVHFQAEEKAFKNLVYTSDAMTV 60 Query: 64 ILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ D+GK+ + I +D Q PV + L+HADF Q+ + VT+ VPV + S G+ Sbjct: 61 VI--DLGKDGQYAAIAQDMQWHPVKEQLLHADFYQIFDDKPVTMEVPV--VTVGTSRGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG L + + N+PD I VD+ +KIG+ ++ D+R+PE Sbjct: 117 NGGVLRRNNRRLKVKAIPANLPDLIEVDIAPMKIGNKKYVRDLRVPE 163 >gi|269957488|ref|YP_003327277.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] gi|269306169|gb|ACZ31719.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] Length = 199 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A R + GKG+AR LR+ +IPA++YG+ DP +AL + L N + + Sbjct: 3 EIKLVAEARSEFGKGAARRLRRESKIPAVLYGHGGDPVHVALPGHQTALALRQANALFAV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LD GK + V+ KD Q D + ++ H D L V +G + V VPV E+ +P Sbjct: 63 -ELD-GKSQLAVV-KDVQRDAIGTVIEHIDLLVVKKGEKIAVDVPVHITGES-AP----- 113 Query: 125 GKLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G +++V +S+ A +IP SI V + L G +I D+ LP ++ ++ + + Sbjct: 114 GTIHIVEAQTLSVEAEATHIPVSIEVSIEGLAAGTNIFAADVTLPAGSTLLTDGDHIVVA 173 Query: 184 IVAP 187 + P Sbjct: 174 VAEP 177 >gi|163753734|ref|ZP_02160857.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] gi|161325948|gb|EDP97274.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] Length = 199 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 93/161 (57%), Gaps = 8/161 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS--KRLYSKNFM 61 K ++ R+ VGK + + LR G++P ++YG P+ SA+++S K +Y+ N Sbjct: 2 KSITINGSQRESVGKVATKALRNAGKVPCVLYGG---DNPLHFSAEELSFSKLVYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+ G + I +D Q PV+D ++H DF ++ + VT+ +PV+ + KSPG+ Sbjct: 59 TVVIALEDGSTH-NAILQDIQFHPVTDKILHIDFYRLFDDKEVTMDIPVKVVG--KSPGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GG L + ++ + N+PD I D+++LKIG+ +++ Sbjct: 116 MNGGVLRLNKRKLRVKAIPANLPDFIEADISELKIGNKLYV 156 >gi|73663564|ref|YP_302345.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581585|sp|Q49V10|RL25_STAS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72496079|dbj|BAE19400.1| 50S ribosomal protein L25 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 220 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 8/165 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR G++PAI+YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKTLRNTGKVPAIVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K Sbjct: 59 GVIELGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGTK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 +GG + + + +NIP+SI VD+++L+I DS+ +EDI++ Sbjct: 117 EGGVVEQPLFNLEVTATPDNIPESIEVDISELEINDSLSVEDIKV 161 >gi|297200252|ref|ZP_06917649.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] gi|197716994|gb|EDY61028.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] Length = 197 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 8/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N + Sbjct: 3 EVKIAAETRSEFGKGAARRIRRDNKVPGVLYGHGSDPIHLTLPGHELLLALRTSNVL--- 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++LDI GK IPK Q DP+ L H D V G V V + V+ + +PG Sbjct: 60 ISLDIDGKTNELAIPKSVQRDPIKGYLEHVDLQLVKRGEQVNVEIFVQ-TEGDLAPG--- 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 L V + + + A +IP+S+TV + L GDSI +DI LP+ T Sbjct: 116 AFLLEHVLNALPVEAEATHIPESVTVSIEGLSAGDSILAKDIPLPKGT 163 >gi|294673023|ref|YP_003573639.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] gi|294474355|gb|ADE83744.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] Length = 198 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALS----AKDISKRLYS 57 KE +S R GK +++ +RK G +P +YG P++LS A + + +YS Sbjct: 2 KEISVSGQKRATTGKKASKEMRKEGLVPCNMYGEAKGENGLPVSLSFAIPASQLRRVVYS 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + LT+D E + K+ Q P +D L+H DF +V+E +T+ +PV+ + + Sbjct: 62 PDVYVVNLTID--GEAHKAVMKELQFHPTTDALLHVDFYEVNEEKPITIGIPVKLVGHAQ 119 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G++ GG+L+ +++ P IP+ + VD+ +LK+G +I + ++ Sbjct: 120 --GVRDGGRLSQAVRTLNVTAPYKQIPEVLNVDVTELKLGKAIKVAELNF 167 >gi|317126792|ref|YP_004093074.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] gi|315471740|gb|ADU28343.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] Length = 212 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 7/173 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ + +R +G +P +IYG KP+ + + K + +N + Sbjct: 2 ATLQANTREDLRGSRLNKIRNDGNVPGVIYGKTIGNKPVTVEGSSLLK-MIRENGRNGVF 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ D Q+DP+ + +IH DF S + VPV+ + E + G+K GG Sbjct: 61 KLDVDGQQTDVMIYDIQVDPLKNEVIHVDFYAADMKSELDADVPVQAVGE--AIGVKNGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 L HEVS+ N++PDSI +D++ L + DS+ ++D+ KTS ++N Sbjct: 119 VLQQSLHEVSVKALPNDLPDSIEIDVSQLDVNDSLQVKDL----KTSGKYEIN 167 >gi|291456700|ref|ZP_06596090.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] gi|291381977|gb|EFE89495.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] Length = 218 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 10/165 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL +R++ GKG AR LR +IPA IY +DP + L ++ + L N + Sbjct: 14 IKLEGEVRNEFGKGVARRLRVANKIPATIYAGGADPAFVTLPMRETTLALRHTN---ALF 70 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T++ G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G Sbjct: 71 TIEFGGESKMAVVKDVQKNPVKRIIEHIDFFEVKAGEKIDVEVPV-FVE-----GTPKGA 124 Query: 126 KLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + +N+P+ I V++ L G + +DI LPE Sbjct: 125 AVAFVDIQELKVRADISNLPEKIVVNVEGLTDGTKVFAKDIELPE 169 >gi|329930032|ref|ZP_08283657.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328935431|gb|EGG31903.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 191 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + K + LR +G+IPA+++G + I LSAK+ K +++N IL L Sbjct: 5 LRAETRAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGK--WARNGKGGILEL 62 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +E + V+ + Q DPV+ IH DFL+++ V V + +I K G K GG Sbjct: 63 HFEDREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIGTAK--GAKSGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++V Sbjct: 121 VQIQSTFIEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSVVT 180 Query: 187 P 187 P Sbjct: 181 P 181 >gi|325954510|ref|YP_004238170.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] gi|323437128|gb|ADX67592.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] Length = 206 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 4/179 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + V R+ VGK + R LR Q+P ++YG + A K +Y+ T Sbjct: 2 KSITIQGVKRESVGKVATRALRNAEQVPCVVYGG-QETIHFAADEKAFKGLVYTPEAHTV 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L+ G + VH I +D Q PV+D ++HADF Q+ + +T+ VPVR + ++ G+ Sbjct: 61 NVELNDGTK-VHAILQDIQFHPVTDRILHADFYQLKDDKEITIEVPVRLV--GRARGVVA 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD + +D+ ++IG ++E ++ + T + ++ +A Sbjct: 118 GGVLRFNMRKLKVRAIPANLPDEVVIDITSMRIGAKKYVESLKNDKYTFAHPDNSVVVA 176 >gi|227497783|ref|ZP_03927969.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] gi|226832783|gb|EEH65166.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] Length = 207 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L R GKGSAR R+NGQ+P ++YG+ ++P+ L ++ + RL + Sbjct: 1 MANKAITLKGTDRTNFGKGSARQARRNGQVPVVVYGHGTEPRHFLL--EEHATRLALRGN 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + E + V+ KD Q P+ + H DF V+ V V VPV I E + Sbjct: 59 ENALVELAVDGETILVLTKDVQRHPIRPGVQHVDFQLVNRNERVEVEVPVTVIGEPVAST 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 I V + + P +IP++I +D+ ++ G +I + DI LPE +++ Sbjct: 119 IHM-----VEAAHLLVSAPVISIPEAIEIDITGVEAGTTIRVSDITLPEGVEAVT 168 >gi|320104416|ref|YP_004180007.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] gi|319751698|gb|ADV63458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] Length = 202 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 5/170 (2%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 G AR LR+ G IPAIIYG+ PI L D+ + + ++ ++ +E V Sbjct: 21 GTRVARKLRQQGLIPAIIYGHKEPNLPIVLKHDDVWRIIKQQSHRVDLVVAGKTEE---V 77 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + + Q D +S +IH DF +VS TV V + F + G+ GG L HE+ + Sbjct: 78 LVRHVQWDHLSRDIIHLDFYRVSPEETVESIVRLEF--KGTPAGVAAGGLLETPVHELKV 135 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 C A++IPD I VDL+ L++G S++ D+ LP ++ +A +VA Sbjct: 136 DCRADSIPDLIAVDLSGLELGQSLYARDVPLPAGVKLHGNPDLLVAHVVA 185 >gi|83588951|ref|YP_428960.1| 50S ribosomal protein L25/general stress protein Ctc [Moorella thermoacetica ATCC 39073] gi|109893369|sp|Q2RMC2|RL25_MOOTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83571865|gb|ABC18417.1| LSU ribosomal protein L25P [Moorella thermoacetica ATCC 39073] Length = 208 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK--NFMTTIL 65 L MR +VGK +AR LR+ G++P IIYG + + A+ + L ++ N + ++ Sbjct: 6 LEVTMRPEVGKQAARRLRRQGKLPGIIYGKKIANLAVIIPARQLEHILATEGENALLKLV 65 Query: 66 TLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 G KE VI ++ Q P+ L H DF QVS + VPV I E ++ G+K+ Sbjct: 66 VSGDGQNKEFTAVI-REVQRHPLKGNLTHVDFYQVSMEDKLRATVPV--ILEGEARGVKE 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L E+ + ++P+SI VD++ L +G+ + + +I++P +S+ + IAT Sbjct: 123 GGILQHGVREIEIESLPADLPESIVVDVSHLGVGEHLTVGEIKVPAGVKILSEPDTVIAT 182 Query: 184 IV 185 +V Sbjct: 183 VV 184 >gi|32266993|ref|NP_861025.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter hepaticus ATCC 51449] gi|71153145|sp|Q7VG30|RL25_HELHP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32263045|gb|AAP78091.1| ribosomal protein L25 [Helicobacter hepaticus ATCC 51449] Length = 178 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG A D K + K T I + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQQNIHCAFKLNDFIKAMKQKT--TLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ ++YQ DPV++ LIH D L +G VPV I + + G+K G L Sbjct: 60 QVGGKTLEVVIQEYQKDPVTNTLIHVDLLLAQKGILNKYKVPV--IVKGNAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + +S+ C A N+P++ +D++DL +GDSI + D+ Sbjct: 118 FISTKRISVKCAAENLPNAYEIDVSDLDVGDSILIRDL 155 >gi|295401983|ref|ZP_06811945.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|312109199|ref|YP_003987515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] gi|294975985|gb|EFG51601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|311214300|gb|ADP72904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] Length = 210 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + R +R G IP I+YG + K I ++ D K + +++TL Sbjct: 5 LEAKERTDRKHSTTRRIRLQGNIPGILYGKNVENKMIFVNGSDFQKTIREAG-RHSLITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E V+ +D Q D + ++H DF V + V + V +RFI E + G+K GG L Sbjct: 64 KLNDEEYSVLLRDVQRDSLRGNILHVDFQAVDMSTEVDIDVDIRFIGE--AAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 H++S+ NIP SI +D++ L+IGD+I + D++ K + + IATI+ P Sbjct: 122 QQNLHQLSIRVLPANIPPSIDIDISHLQIGDTITVGDVKTDGKYEINHEPSEVIATILPP 181 >gi|124514473|gb|EAY55986.1| ribosomal protein L25 [Leptospirillum rubarum] Length = 207 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 7/167 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 2 QNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSR-GKATSLSLNLAHVQKAFHSHAGSHA 60 Query: 64 ILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I E + Sbjct: 61 IFRLKVTGTSDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIGETPA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G+K GG L E+++ C +PD + VD + L + +S H+ D+ Sbjct: 121 -GVKLGGVLEHHVREITVECLPAAMPDHLKVDASSLAMNESFHVRDL 166 >gi|296392942|ref|YP_003657826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] gi|296180089|gb|ADG96995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] Length = 209 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A +RD+ GKG++R R++G +PA++YG+ DPK + AK+ + R+ N + I+ Sbjct: 5 ARVEATVRDEFGKGASRRARRDGHVPAVLYGHGIDPKHFNIPAKEFA-RVLRANGVNAIV 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L G E + K + P L H D + G + V VPV S Sbjct: 64 SLHAGGEEHLALTKTVVVHPTKSYLQHVDLQVIRRGERIAVDVPVVLTGSAASG------ 117 Query: 126 KLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +VV HE + L A +IP+ I V + L+IG I ++ LPE S Sbjct: 118 --SVVQHETTTLSVEAEAMHIPEQIEVSIEGLEIGSKIIASELELPEAVS 165 >gi|298207389|ref|YP_003715568.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] gi|83850025|gb|EAP87893.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] Length = 217 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 8/155 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA--KDISKRLYSKNFMTTILTLDIG 70 R+ +GK + + LR +P ++YG KP+ SA K+ +Y+ + T ++ LD G Sbjct: 11 RESLGKKATKALRNAEAVPCVLYGG---EKPVHFSAEEKEFRNLIYTPDVHTVVIELDNG 67 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 E + I +D Q PVS+ ++H DF ++ +G +T+ +P+ +E + G+K GG L Sbjct: 68 -EKYNAIVQDLQFHPVSEAILHVDFYEIVDGRPITMEIPIH--SEGVAKGVKNGGVLRFN 124 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + + A N+PD I D+ LKIG+ +++ ++ Sbjct: 125 LRRLKVKGLAKNLPDYIVADVTKLKIGNKLYVTEV 159 >gi|325187175|emb|CCA21716.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] gi|325187320|emb|CCA21859.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] Length = 258 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 9/165 (5%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKNFMT---TIL 65 +R + G +AR LRK G +P ++YG N D K + K + RL+ K + + + Sbjct: 43 IRTQDGSRAARKLRKKGYLPGLLYGEGMNGDDTKVLVSLEKKLFDRLHRKLWTSIDNQVF 102 Query: 66 TLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + I +D Q PV+DI + +F++ G V++ P+ +INE SPGIK+G Sbjct: 103 KVQVKDQPPILAIMRDVQFHPVTDIPLTVNFIRYKNGRKVSI--PITYINEEGSPGIKRG 160 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G +N + HEV +P ++ +D+N L + +E I P+ Sbjct: 161 GYINHIYHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPD 205 >gi|225011226|ref|ZP_03701685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] gi|225004640|gb|EEG42603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] Length = 210 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK + + LR G +P +IYG KP+ SA +++ + +Y+ N Sbjct: 2 KSITIKGSQRESVGKKATKALRNAGMVPCVIYGG---DKPVHFSAAELAFKPLIYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + L G ++ V+ +D Q PV+D ++H DF Q+ VT+ +PV+ E SPG+ Sbjct: 59 TVTVDLADGTKIDAVL-QDIQFHPVTDKILHIDFYQLFSDKPVTMSIPVQL--EGNSPGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG++ ++ + ++PD +VD++ LKIG +I + + L EK + + + I Sbjct: 116 RNGGRMLFRKRKLMIKALPGDLPDFFSVDISKLKIGGTIAVSSL-LDEKYTFLQPESTAI 174 Query: 182 ATI 184 + Sbjct: 175 VQV 177 >gi|326772330|ref|ZP_08231615.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] gi|326638463|gb|EGE39364.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] Length = 203 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L ++ + RL ++ Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLL--EEHATRLALRSN 58 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI G E + + KD Q P+ + H DFL V V V VPV I E +P Sbjct: 59 DNALVELDIAGGETLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGE-AAP 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 118 GTIH----MIEAATVMVSAPAVSVPEAIEVDVTGVAAGTVLTLADIALPKGVEAVADAET 173 Query: 180 TIATI 184 + + Sbjct: 174 AVVNV 178 >gi|271969795|ref|YP_003343991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] gi|270512970|gb|ACZ91248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] Length = 199 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 10/171 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E + A R++ GKG+AR +R+ ++P ++YG+ +DP+ + L ++ L + N + + Sbjct: 3 EVVIKAESRNEFGKGAARKIRRENKVPVVLYGHGTDPQHLTLPGHELLLALRTPNVLIRL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 G +PK Q DP+ L H D L V G VT+ +PV + E Sbjct: 63 E----GAAAELALPKGVQRDPIRGFLEHVDLLLVKRGEKVTIDIPVTVVGEVAD------ 112 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G L+ VS+ A +IP + VD+ ++IG D++LPE TS ++ Sbjct: 113 GILDQQLVSVSVESEATHIPTGVEVDVEGMEIGTQFTAGDLKLPEGTSLIA 163 >gi|260893657|ref|YP_003239754.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] gi|260865798|gb|ACX52904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] Length = 197 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 6/165 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG L G+IPA++YG P+ +S +D+ K L + ++ L Sbjct: 5 LVAQVRTGRGKGYRNRLAAQGKIPAVVYGKALGSVPVEVSLRDLKKVLGGETIKGKLIDL 64 Query: 68 DI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I G E + K+ Q +P++ LIH DF QVS VT VPV E G+K+ Sbjct: 65 KIVGDGWERQEKALVKEMQHNPLTGELIHVDFHQVSLTEEVTATVPVELSGE--PVGVKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 GG L EV + C +P+ I VD++ L +GD+I + D+ +P Sbjct: 123 GGVLEHFLREVEISCLPTALPEVIKVDVSSLDVGDTIFVRDLPVP 167 >gi|206602648|gb|EDZ39129.1| Ribosomal protein L25 [Leptospirillum sp. Group II '5-way CG'] Length = 207 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 7/167 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 2 QNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSR-GKATSLSLNLAHVQKAFHSHAGSHA 60 Query: 64 ILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I E + Sbjct: 61 IFRLKVTGASDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIGETPA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 G+K GG L E+++ C +PD + VD + L + +S H+ D+ Sbjct: 121 -GVKLGGVLEHHVREITVECLPAAMPDHLKVDASTLSMNESFHVRDL 166 >gi|222054664|ref|YP_002537026.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] gi|254801049|sp|B9M5U4|RL25_GEOSF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221563953|gb|ACM19925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] Length = 196 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 6/168 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQ+ L+ +R K GKG +R LR++ IP ++YG + ++L K++S + + Sbjct: 1 MDQR--ILNVELRSKTGKGISRQLRRSESIPGVVYGKGIESVSVSLKTKELSNAIAGEGG 58 Query: 61 MTTILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ILTL G L VI D D + + +H D +++ + V V V + + Sbjct: 59 RNHILTLKGGGSLDGQMVIVADLLQDSLKGLPLHVDLHKINLADKIKVKVKVNLVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 G+K+GG L+ HE+ + C ++IP+ + VD+ L +G SIH+ D++ Sbjct: 117 AGVKEGGLLDFAMHEIEIECLPSHIPEHLDVDVTSLTLGHSIHIGDLK 164 >gi|320536078|ref|ZP_08036135.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] gi|320147078|gb|EFW38637.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] Length = 211 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R +GK +A R+ G++PA++Y PI +S D K L+ +TI+T+ Sbjct: 6 LSGRRRTGLGKAAAARCRREGRLPAVMYDRFGKSIPIDVSQYDFYK-LFRNITESTIITV 64 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGG 125 + K+ V KDYQ + ++D + H DF +V G + + +R + SP G++QG Sbjct: 65 KLDDKDEFEVFVKDYQHNIITDTVEHVDFYEVERGKVLRTKIQLRL---SGSPEGVRQGA 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L ++ + C ++P+ I VD++ L + +++H+ DI++ + ++ ++ +AT+ Sbjct: 122 VLEAGLTDIEVECLPKDLPERIIVDVSKLDLNEALHVRDIKVQGEVKILTDPDLPVATL 180 >gi|311028983|ref|ZP_07707073.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] gi|311032295|ref|ZP_07710385.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] Length = 213 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 6/172 (3%) Query: 18 KGSARL-LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 KGS++ +R+ G IPA++YGN ++ K I + +K+ K + I++L+IG + V Sbjct: 13 KGSSKTKIREEGLIPAVVYGNDTENKSITVDSKEFIKTIRETG-RNGIISLEIGSDKRKV 71 Query: 77 IPKDYQLDPVSDI-LIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 + DYQ++P+ + +H DF V+ S + V V V + K G+K GG L V HEVS Sbjct: 72 MLYDYQINPLKSLEFVHLDFHVVNFKSEIDVDVTVHVTGDAK--GVKDGGVLQQVLHEVS 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + N++P+SI VD+ +L + ++I + D++ K S + + +A+I+ P Sbjct: 130 IKALPNDVPESIDVDVTELDVNENITIGDLK-SGKYSFNHEDDEVVASILPP 180 >gi|229494937|ref|ZP_04388688.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] gi|229318161|gb|EEN84031.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] Length = 202 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 8/184 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D + L + Sbjct: 3 EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFAAILRAHG-TNA 61 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ILTLDI G E V + K + P+ + + HAD L + +G VT+ V V + + + Sbjct: 62 ILTLDIEGTEQV-ALTKSVVVHPIRNYIEHADLLVIKKGEKVTIDVNVIVVGDAAA---- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + +S+ A +IP+ I V + L+IG I + LP+ ++ + + I Sbjct: 117 -GTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPKGSTLQADADTLIV 175 Query: 183 TIVA 186 +VA Sbjct: 176 NVVA 179 >gi|222152154|ref|YP_002561314.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] gi|222121283|dbj|BAH18618.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] Length = 216 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L A++R K KG +R G+IPA++YG + + + + K R +N Sbjct: 2 TSLKAIIRKGKQTKGELNKIRNEGKIPAVVYGYGASNTSVKVDEPEFVKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ+DP+ + + H DFL ++ S +TV V V E + G+K Sbjct: 59 GVIELGVGSKAIKVMVSDYQIDPLKNKVTHIDFLAINMKSELTVDVVVNLTGE--AQGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++S+ + IP++I VD+ +L IGDSI + D++ + + ++ + I Sbjct: 117 EGGVVQQPLFQLSVTATPDEIPETIEVDVTELNIGDSIMVGDLKADKAYTINNEDDEAIV 176 Query: 183 TIVAP 187 ++V P Sbjct: 177 SVVPP 181 >gi|94971565|ref|YP_593613.1| 50S ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] gi|94553615|gb|ABF43539.1| LSU ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] Length = 233 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++A R GK AR +RK G +PA +YG DP + + K +SK L S+ TI Sbjct: 5 ENTVTAQSRKAGGKNDARRVRKTGMVPAAVYGAGKDPVAVTVDPKAVSKILRSETGHNTI 64 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L + G E V ++ D+Q +P+ L+H D +++ + V VPV I + + G+K Sbjct: 65 FDLAVNGGAEKVMIV--DWQYEPLKGKLLHVDLKRIAMDKVLRVSVPV--ILQGTAEGVK 120 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 +GG L + EV + C +IP +I D+ LK GD++ ++D+ Sbjct: 121 NEGGILEQLIREVEIECLPADIPRAIFADVTPLKHGDNLRVKDL 164 >gi|325067352|ref|ZP_08126025.1| 50S ribosomal protein L25P [Actinomyces oris K20] Length = 204 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L ++ + RL ++ Sbjct: 2 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLL--EEHATRLALRSN 59 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI G E + + KD Q P+ + H DFL V V V VPV I E +P Sbjct: 60 DNALVELDIAGGETLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGE-AAP 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 119 GTIH----MIEAATVLVSAPAVSVPEAIEVDVTGVAAGTVLTLADITLPKGVEAVADAET 174 Query: 180 TIATI 184 + + Sbjct: 175 AVVNV 179 >gi|51246585|ref|YP_066469.1| 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] gi|71153141|sp|Q6AJL8|RL25_DESPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50877622|emb|CAG37462.1| related to 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] Length = 183 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +++A +R+ GKG R LR+ G PA++YG P+ + AK + +L + + T+ Sbjct: 3 QVEMTASVREAFGKGPMRRLRQQGITPAVVYGAGKAALPLQMDAKILMTQLLEFSRVNTV 62 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++L + G++ +V+ + Q DPV+D L+H DF ++ VPV F E G+ Sbjct: 63 VSLSVDGQDAKNVVIAEIQSDPVTDALVHVDFCEIDLDQAREFTVPVTF--EGTPKGVDL 120 Query: 124 GGKLNVVCHEVSLLCPAN--NIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG+L H S++ A +IP+ +++ DL I + + + D+ L E Sbjct: 121 GGRLE--SHLTSVILKAKPLDIPNEFVINIADLAIDEQLTVADVALAE 166 >gi|15644375|ref|NP_229427.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga maritima MSB8] gi|7674238|sp|Q9X1W2|RL25_THEMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4982200|gb|AAD36694.1|AE001806_4 general stress protein Ctc [Thermotoga maritima MSB8] Length = 215 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 101/185 (54%), Gaps = 7/185 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R+ GK AR LR+ G++PA++YG ++P P+ + + K ++ + T I + Sbjct: 4 LEARVREVKGKREARRLRRRGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQLI 63 Query: 68 ---DIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 D G + V K Q D VS+ ++H DF + ++G + ++VP++ + K G++ Sbjct: 64 IKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVGVE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V E+ + + +P I VD++ L +GD IH D++LPE + + + Sbjct: 122 KGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEAVV 181 Query: 183 TIVAP 187 +++ P Sbjct: 182 SVLVP 186 >gi|186681114|ref|YP_001864310.1| 50S ribosomal protein L25/general stress protein Ctc [Nostoc punctiforme PCC 73102] gi|226736342|sp|B2J8B8|RL25_NOSP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186463566|gb|ACC79367.1| transcriptional regulator, Fis family [Nostoc punctiforme PCC 73102] Length = 199 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 14/174 (8%) Query: 22 RLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 R LR++G IPA +YG+ ++ + + AK + + L + T++ L+I GK L+ Sbjct: 17 RALRRSGLIPANLYGHKGTESISLTIEAKTVERLLKRVSVNNTLIELNIADAPWRGKALL 76 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGKLNVVCHE 133 ++ Q+ P H F V+ TV V +RF+ + G+KQ GG L+ V E Sbjct: 77 ----RELQIHPAKGTPYHLSFFAVAGHGDTTVEVRLRFVG--TAVGVKQEGGVLDTVITE 130 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C NIPD I +D+ +L+IGDS+ + DI PE + +++L + +++ P Sbjct: 131 LQVSCAPENIPDVIEIDVTNLQIGDSLSISDIPFPEGVTPLAELERLVVSVLPP 184 >gi|320532195|ref|ZP_08033062.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] gi|320135595|gb|EFW27676.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] Length = 203 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+P ++YG+ ++P+ + L L S + Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPVVVYGHGTEPRHLLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G+ L+ V+ KD Q P+ + H DFL V V V VPV I G Sbjct: 61 ALVELVIDGGETLL-VLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVI------G 113 Query: 121 IKQGGKLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G ++++ + + PA ++P++I VD+ D+ G + + DI LP+ ++S + Sbjct: 114 TAAPGTMHMIEAATIMVSAPAVSVPETIEVDITDVAAGTVLTIADITLPKGVEAVSDADT 173 Query: 180 TIATI 184 + + Sbjct: 174 AVVNV 178 >gi|78042985|ref|YP_359067.1| 50S ribosomal protein L25/general stress protein Ctc [Carboxydothermus hydrogenoformans Z-2901] gi|109893351|sp|Q3AFL7|RL25_CARHZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77995100|gb|ABB13999.1| ribosomal protein L25 [Carboxydothermus hydrogenoformans Z-2901] Length = 197 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K++A +R K +G L K G++P ++YG +P +A++A+++ L + + Sbjct: 3 KITASVRLKKTRGERNRLLKEGKVPGVMYGKNIEPVAVAVNARELES-LVERGL--KLFE 59 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + + V+ K+ Q PV+ LIH DF V G + VPV E G+K GG Sbjct: 60 LSVEGKTQRVLVKELQHHPVTGKLIHVDFQVVESGRKIRQLVPVELYGE--PAGVKAGGI 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L EV++ C ++P+ I D++ L++GD + ++D+ LP + IA I A Sbjct: 118 LEHGLSEVTVECLPEDLPEFIEADVSKLEVGDCLRVKDLELPPGVRVIEDPESIIALISA 177 Query: 187 P 187 P Sbjct: 178 P 178 >gi|315193864|gb|EFU24258.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS00] Length = 213 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 20/191 (10%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LRK+G++PA++YG K++S ++ F+ I Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYG---------YGTKNVSVKVDEVEFIKVI 52 Query: 65 --------LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E Sbjct: 53 REVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE- 111 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ + Sbjct: 112 -AVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIEND 170 Query: 177 LNITIATIVAP 187 ++ T+VAP Sbjct: 171 SAESVVTVVAP 181 >gi|225621394|ref|YP_002722653.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] gi|225216215|gb|ACN84949.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] Length = 196 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A+ RD K R LR G A +YG + IA+ K+ K ++S I+TL Sbjct: 7 IKALQRDTKFKSVGRKLRNEGYALATLYGR-ENQYSIAVELKEFVK-VFSLAGQHDIITL 64 Query: 68 DIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 DI + V+ KDYQ+D + I+ H DF ++ + +VP+ E G++ GG Sbjct: 65 DIQNDKTREVLVKDYQIDGIKRIIRHIDFYEIDRNKKIKTYVPIHI--EGTPEGVRLGGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + +++ +IP + VD+++LK+GDS+H+ DI+ PE + + I T+V Sbjct: 123 TLEQVEYGLNIKAFPGSIPRELVVDVSELKVGDSLHISDIKFPEGVDPVGDASKAIVTVV 182 >gi|16802257|ref|NP_463742.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes EGD-e] gi|46906443|ref|YP_012832.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes serotype 4b str. F2365] gi|47093153|ref|ZP_00230928.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|47096204|ref|ZP_00233803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|217965703|ref|YP_002351381.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|224500338|ref|ZP_03668687.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes Finland 1988] gi|224503469|ref|ZP_03671776.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL R2-561] gi|226222840|ref|YP_002756947.1| general stress protein [Listeria monocytogenes Clip81459] gi|254825875|ref|ZP_05230876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|254829302|ref|ZP_05233989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|254832468|ref|ZP_05237123.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 10403S] gi|254854441|ref|ZP_05243789.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|254901004|ref|ZP_05260928.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes J0161] gi|254913928|ref|ZP_05263940.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|254933051|ref|ZP_05266410.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|254938281|ref|ZP_05269978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|254992856|ref|ZP_05275046.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-064] gi|255026020|ref|ZP_05298006.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-003] gi|255028168|ref|ZP_05300119.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes LO28] gi|255520467|ref|ZP_05387704.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-175] gi|284803050|ref|YP_003414915.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284996191|ref|YP_003417959.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290894281|ref|ZP_06557248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|300766344|ref|ZP_07076303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|71153150|sp|Q724K2|RL25_LISMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153151|sp|Q8YAD3|RL25_LISMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16409576|emb|CAD00738.1| ctc [Listeria monocytogenes EGD-e] gi|46879707|gb|AAT03009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes serotype 4b str. F2365] gi|47015452|gb|EAL06386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|47018460|gb|EAL09218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|118420012|gb|ABK88268.1| general stress protein Ctc [Listeria monocytogenes] gi|217334973|gb|ACK40767.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|225875302|emb|CAS03999.1| Putative general stress protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601715|gb|EEW15040.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|258607841|gb|EEW20449.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|258610892|gb|EEW23500.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|284058612|gb|ADB69553.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284061658|gb|ADB72597.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290556165|gb|EFD89712.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|293584609|gb|EFF96641.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|293591946|gb|EFG00281.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|293595114|gb|EFG02875.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|300512943|gb|EFK40031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|307569750|emb|CAR82929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes L99] gi|328467967|gb|EGF38994.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 1816] gi|328469739|gb|EGF40661.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 220] gi|332310620|gb|EGJ23715.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A] Length = 207 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 7/182 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ LR G++P IIYG S+ P+++ + ++ K + N + ++ Sbjct: 5 LEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFSV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ +YQ+DP+ D+L+H D L V V V V + + +PG+K GG L Sbjct: 64 TVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIATIV 185 + H+V + +P++I +D++ L+IGD + D LPE + Q T+ T+ Sbjct: 122 QQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTND--LPENKDYVVQAEEEETVVTVS 179 Query: 186 AP 187 AP Sbjct: 180 AP 181 >gi|332826853|gb|EGJ99653.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286] Length = 193 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 6/166 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIAL--SAKDISKRLYSKNFM 61 K +L R +GK + + RK +IPA+IYG K I + ++ K +Y+ Sbjct: 2 KTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGEKADKAIHFIVTNSEVRKLIYTPEIF 61 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 LT +GK+ I KD Q+ PV+D ++H DFL V E +T+ VPV + + + G+ Sbjct: 62 LVDLT--VGKDNYKAILKDIQVHPVTDEILHLDFLHVFENKPITIDVPV--VLDGLAEGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 K GGKL++ ++ + + +P+ + VD++ L +G SI + ++ Sbjct: 118 KAGGKLSLDLRKLKVRALYDKVPEKVHVDVSGLALGKSIQVGELHF 163 >gi|86130926|ref|ZP_01049525.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] gi|85818337|gb|EAQ39497.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] Length = 208 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 18/180 (10%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK + + LR G +P ++YG +PI SA +++ + +Y+ + Sbjct: 2 KSVSIQGSKRESVGKKATKALRNAGLVPCVVYGG---DEPIHFSAPELAFKNLVYTPDAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + LD V I +D Q PV+D ++H DF Q+ EG VT+++PV F +K G+ Sbjct: 59 TVEIELD--GVTVQAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFTGNSK--GV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG L + + ++PD + D+ +LKIG+ +++ + Q NITI Sbjct: 115 RNGGVLRKTNRVLRVKALPKDLPDFLEADITNLKIGNKLYI---------GELPQENITI 165 >gi|16799320|ref|NP_469588.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria innocua Clip11262] gi|71153149|sp|Q92F64|RL25_LISIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16412672|emb|CAC95476.1| ctc [Listeria innocua Clip11262] gi|117957151|gb|ABK59047.1| Ctc [Listeria innocua] gi|117957159|gb|ABK59054.1| Ctc [Listeria innocua] gi|118723078|gb|ABL10242.1| general stress protein [Listeria innocua] gi|118723086|gb|ABL10249.1| general stress protein [Listeria innocua] gi|118723094|gb|ABL10256.1| general stress protein [Listeria innocua] gi|118723102|gb|ABL10263.1| general stress protein [Listeria innocua] gi|118723110|gb|ABL10270.1| general stress protein [Listeria innocua] gi|118723118|gb|ABL10277.1| general stress protein [Listeria innocua] gi|118723126|gb|ABL10284.1| general stress protein [Listeria innocua] gi|313621020|gb|EFR92141.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378] gi|313625452|gb|EFR95201.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023] Length = 207 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 7/184 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIAT 183 L + H+V + +P++I +D++ L+IGD + D LPE + Q T+ T Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTND--LPENKDYVVQAEEEETVVT 177 Query: 184 IVAP 187 + AP Sbjct: 178 VSAP 181 >gi|289178670|gb|ADC85916.1| LSU ribosomal protein L25P [Bifidobacterium animalis subsp. lactis BB-12] Length = 244 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + GKG AR +R +IPA IY P + L ++ S L N + T+ Sbjct: 44 LEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN---ALFTI 100 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + + KD Q +PV I+ H DF +V G + V VPV F+ G +GG + Sbjct: 101 KFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPV-FVE-----GTPKGGAI 154 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VV E+ + +N+P+ I V + L+ GD+I D+ LPE Sbjct: 155 AVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPE 197 >gi|256824231|ref|YP_003148191.1| 50S ribosomal protein L25P [Kytococcus sedentarius DSM 20547] gi|256687624|gb|ACV05426.1| LSU ribosomal protein L25P [Kytococcus sedentarius DSM 20547] Length = 226 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K KL+ R GKG+AR R+ G IPA++YG+ P + L + L N Sbjct: 1 MANKTIKLTCTERTTFGKGAARQARREGGIPAVVYGHGEGPFHVILPGHEAFIALRHTNA 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T LT G++ + V+ KD Q DP+ I+ H DF+ V V V + + E Sbjct: 61 LMT-LTWGSGEDRL-VLAKDVQRDPIKPIIEHVDFVIVDRNEKVDVDIAIHLDGEAGPET 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + ++V V++ P +IP+SITV + + G IH D+ LPE ++ T Sbjct: 119 V-----VSVPTSTVTVKAPVLDIPESITVSVEGAEAGTLIHAGDLELPEGVELVTDAEET 173 Query: 181 IATIVAPIS 189 I + IS Sbjct: 174 IINVSEAIS 182 >gi|218441640|ref|YP_002379969.1| 50S ribosomal protein L25/general stress protein Ctc [Cyanothece sp. PCC 7424] gi|226736304|sp|B7KCY0|RL25_CYAP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218174368|gb|ACK73101.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7424] Length = 198 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 13/175 (7%) Query: 24 LRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELVHV 76 LR+ G IPA +YG+ ++ + + KD L + T++ ++I GK L+ Sbjct: 19 LRRQGLIPAALYGHKGTESISLIIKEKDAQLLLKKASVNNTLVDVNIPDVPWSGKALI-- 76 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 ++ Q P + H F V+ + V VP+ + E S G+KQGG + V E+S+ Sbjct: 77 --REVQTHPWKRFVYHLSFFSVAAHGKIDVVVPLNLVGE--SSGVKQGGIIEQVITEISV 132 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISGS 191 C +IP++I +D++ LKIGDSI + D++L E + + TI T++AP GS Sbjct: 133 QCLPESIPETIEIDISPLKIGDSISVGDLQLSEGVTYLDDPTQTILTVMAPKKGS 187 >gi|94987179|ref|YP_595112.1| 50S ribosomal protein L25/general stress protein Ctc [Lawsonia intracellularis PHE/MN1-00] gi|166223692|sp|Q1MQD6|RL25_LAWIP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94731428|emb|CAJ54791.1| ribosomal protein L25 (general stress protein Ctc) [Lawsonia intracellularis PHE/MN1-00] Length = 197 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 7/179 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI--- 69 R +GKG R L K IP I Y + PI L +K ++S+ TT+ L I Sbjct: 12 RLDLGKGPNRRLHKKNLIPGIFYTSSGKNIPIQLPELPFTK-IFSEVGRTTVFNLKIESD 70 Query: 70 GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 + + H VI + Q PV + +H D V + + VP+ F K G K GGKL Sbjct: 71 KENITHPVIIWELQYYPVKNRFMHVDLYGVELNKPIKIVVPLEFTGTAK--GTKVGGKLE 128 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++L+ +IP IT+D++DL IG SI++ D++LPE + N I +++ P Sbjct: 129 TYREQLTLIANPLDIPSKITLDISDLDIGKSIYVADLKLPEGVKTSYDTNYAIVSVIMP 187 >gi|183601573|ref|ZP_02962943.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219683892|ref|YP_002470275.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis AD011] gi|241190928|ref|YP_002968322.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196334|ref|YP_002969889.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219179|gb|EDT89820.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219621542|gb|ACL29699.1| ribosomal protein L25, Ctc-form [Bifidobacterium animalis subsp. lactis AD011] gi|240249320|gb|ACS46260.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250888|gb|ACS47827.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793917|gb|ADG33452.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis V9] Length = 208 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + GKG AR +R +IPA IY P + L ++ S L N + T+ Sbjct: 8 LEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN---ALFTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + + KD Q +PV I+ H DF +V G + V VPV F+ G +GG + Sbjct: 65 KFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPV-FVE-----GTPKGGAI 118 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VV E+ + +N+P+ I V + L+ GD+I D+ LPE Sbjct: 119 AVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPE 161 >gi|327542674|gb|EGF29145.1| Ribosomal protein L25 [Rhodopirellula baltica WH47] Length = 205 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 6/174 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ G + R LR++G +PA++YG+ + +A+ + + K L + T L+ D+ + Sbjct: 10 RESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQV-KGLLRHHSKTVQLSGDVDET 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + D Q DP+ ++H D ++V+ V + VP+ E + G+++GG L H Sbjct: 69 ---ALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVLHGE--AVGVREGGMLLENVH 123 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 EV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 124 EVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEA 177 >gi|32476153|ref|NP_869147.1| 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] gi|71153164|sp|Q7UKU9|RL25_RHOBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32446697|emb|CAD76533.1| probable 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] Length = 212 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 6/174 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ G + R LR++G +PA++YG+ + +A+ + + K L + T L+ D+ + Sbjct: 17 RESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQV-KGLLRHHSKTVQLSGDVDET 75 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + D Q DP+ ++H D ++V+ V + VP+ E + G+++GG L H Sbjct: 76 ---ALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVLHGE--AVGVREGGMLLENVH 130 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 EV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 131 EVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEA 184 >gi|315645551|ref|ZP_07898675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315279029|gb|EFU42339.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 191 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + K + LR +G IPAI++G D I LSA + K +++N IL L Sbjct: 5 LRAETRAVMNKTGLKQLRLSGLIPAIVFGAGEDNMMIQLSASEFGK--WARNGKGGILEL 62 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + +E + V+ + Q DPV+ IH DFL++ V V + +I K G K GG Sbjct: 63 CLDNQEPILVLLESVQRDPVTREYIHVDFLRIHINEVVRTRVNLDYIGTAK--GAKAGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + + ++IP +I +D+++L+IGDS+H+ +++LP +S N + ++V Sbjct: 121 VQIQSTFIEIESFPDHIPAAIPIDISELEIGDSLHVGELKLPGGVVPISSANELLVSVVT 180 Query: 187 P 187 P Sbjct: 181 P 181 >gi|323705135|ref|ZP_08116711.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535561|gb|EGB25336.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] Length = 199 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 8/184 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + + K+ +L Sbjct: 4 VELEAVLRTP-GKNAARKLKEKGYIPAILYGKGMESIPLAVETGKL-RTIVQKHGRNVLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + I KD Q D ++ LIH DF +VS V VP++F + G+ + Sbjct: 62 NLIVNGATHQAILKDEQKDELTGKLIHIDFQRVSMNEKVEAAVPLKF----EGVGVIESK 117 Query: 126 KLNVVCHEVSLLCPA--NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 L V + L A +IP+ I VD+++L IGD+I ++D+ +PE + + I T Sbjct: 118 GLLVQHQKWELNVEALPTDIPEEIVVDVSNLDIGDTILVKDVVVPEGVEKVDDSDEVILT 177 Query: 184 IVAP 187 +VAP Sbjct: 178 VVAP 181 >gi|194017996|ref|ZP_03056603.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] gi|194010333|gb|EDW19908.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] Length = 208 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+ Sbjct: 2 ATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TLD+ E V+ + Q DP+ + L+HADF V + VPV+ I E+K G+K GG Sbjct: 61 TLDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGESK--GVKDGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L E+S+ +IP I D+ +L++ D + + D+ + S Q+N +V Sbjct: 119 VLQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLSV----QSSYQVNNDPEEVV 174 Query: 186 API 188 A I Sbjct: 175 ASI 177 >gi|258404967|ref|YP_003197709.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] gi|257797194|gb|ACV68131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 +E +L A RD+VGK R +R+ G IP I Y D P+ + + + + + K Sbjct: 3 EEIRLQAFKRDEVGKQGLRSVRQQGYIPGIYYDAKGDNVPVKVRYRAL-ESAFRKAHSNH 61 Query: 64 ILTLDI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I G+ V+ D Q PV D+++H DF V + V +PV+ E ++ Sbjct: 62 VIQLEIANGGQGTPRPVMIWDIQHHPVKDLILHVDFFGVDMSKEIQVEIPVQI--EGEAQ 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G+ GG+L V + + C + IP++I +D++ L++ +++++ED+ PE Sbjct: 120 GVVDGGQLTVYHEALLVSCLPDAIPENIRIDVSALEMNENVNIEDVTFPE 169 >gi|329925390|ref|ZP_08280312.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328939877|gb|EGG36214.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 210 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ + + Sbjct: 7 VQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGR--SEVF 64 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI G V V+ KD Q + + H DFL++S V V +PV + + + G K G Sbjct: 65 QLDIPGSGKVPVLIKDIQKRRGN--VSHVDFLRISMNKPVRVSIPVDY--QGTAAGTKSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + ++P ++ D++ L+IGD + + D+++PE + + +AT+ Sbjct: 121 GILQTQVTEIEVEGLPGDLPTTLEADVSTLEIGDKLTVADLKVPEGITLHASEEEILATV 180 Query: 185 VAP 187 + P Sbjct: 181 IVP 183 >gi|300726453|ref|ZP_07059899.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] gi|299776181|gb|EFI72745.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] Length = 197 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALSA----KDISKRLYS 57 KE ++ R+ +GK +++ LRK G +P +YG D P+A S K++ K +Y+ Sbjct: 2 KEIDVTGQKRENLGKKASKALRKEGFVPCNLYGEKKDENGAPVAFSFAVSFKELRKIIYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ Sbjct: 62 PHVY--VINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKL--NGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ Sbjct: 118 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF 167 >gi|319953434|ref|YP_004164701.1| lsu ribosomal protein l25p [Cellulophaga algicola DSM 14237] gi|319422094|gb|ADV49203.1| LSU ribosomal protein L25P [Cellulophaga algicola DSM 14237] Length = 207 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 94/170 (55%), Gaps = 8/170 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K +S R+ VGK + + LR G++P ++YG + P+ SA + + + +Y+ N Sbjct: 2 KSITISGSKRESVGKKATKALRNAGKVPCVLYGGET---PLHFSADEPAFKTLVYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ ++ G + V+ +D Q PV+D ++H DF Q+ VT+ +PV+ + SPG+ Sbjct: 59 TAVIEIEGGDKFDAVL-QDIQFHPVTDAILHIDFYQLFADKEVTMDIPVQL--KGNSPGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 GG+L ++++ +PD +D++ LKIG++I +E + E T Sbjct: 116 MNGGRLLFRKRKLTIKALPAKLPDFFDIDISKLKIGNNITVETLLKDEFT 165 >gi|251794072|ref|YP_003008803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] gi|247541698|gb|ACS98716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] Length = 217 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 10/184 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K R LR++G++P I+YG ++ P +A+ K++ L + ++ Sbjct: 5 MMAEQRTTTMKSELRSLRESGRVPGIVYGKQLASPASVAIQEKELLALL--RTHPNAVID 62 Query: 67 LDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 LDI GK+ V + + Q + +S LIH DF Q++ VT HV + + +++ G ++ Sbjct: 63 LDIPGAGKQSVMI--AEIQREKLSRKLIHVDFQQINMNEEVTTHVRIDLVGDSQ--GERE 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + HE+ + C +IPDSI VD+ L +G S + D++ P + ++ + + T Sbjct: 119 GGIVQALLHELEVRCLPGSIPDSIPVDVTGLLMGSSYLVGDVQAPAGVTIVTDPSAVLVT 178 Query: 184 IVAP 187 ++ P Sbjct: 179 VLVP 182 >gi|189462542|ref|ZP_03011327.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] gi|189430703|gb|EDU99687.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] Length = 198 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 10/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKP------IALSAKDISKRLYS 57 K ++ +R + GK +A LR+N +P ++YG D ++ + K +Y+ Sbjct: 2 KSIEIKGSLRTETGKKAAHSLRQNNGVPCVLYGMQKDENGNQVATHFTVTVDGLRKLVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I ++V+ I KD Q PV+D ++H DFLQ++E + + + VPV+ E Sbjct: 62 PHIY--VVDLNIDGKIVNAIMKDIQFHPVTDAILHVDFLQINEENPIVMEVPVQL--EGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + G+K GGKL + ++ + N IP+ + V++ +L +G +I + ++ Sbjct: 118 AEGVKAGGKLALQTRKLKVKALYNLIPERLVVNVTNLGLGKTIKVGEL 165 >gi|332798112|ref|YP_004459611.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] gi|332695847|gb|AEE90304.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] Length = 210 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 106/180 (58%), Gaps = 4/180 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R + K + L++ G++PA++YG + I++ K++S+ L S+ ++++ L Sbjct: 6 LTAAVR-QAAKSENKKLKREGKVPAVVYGKGYETTSISVDDKELSRILKSRG-ESSLINL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E V+ K+ Q + + + + H DF +VS V ++P+ + K G+K+GG L Sbjct: 64 ELNGEAFPVLIKEVQRNVLKNSMEHVDFFKVSMDEEVEYNLPIVLKGDAK--GVKEGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV++ N++ D+I +D++D+ IGD++ + D+++ +K + + + I +++AP Sbjct: 122 QHQKREVAVKSLPNDMLDNIEIDISDMDIGDTLTVADLKIGDKNTVLDDPDEVIVSVLAP 181 >gi|261405476|ref|YP_003241717.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281939|gb|ACX63910.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 210 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ + + Sbjct: 7 VQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGR--SEVF 64 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI G V V+ KD Q + + H DFL++S V V +PV + + + G K G Sbjct: 65 QLDIPGSGKVPVLIKDIQKRRGN--VSHVDFLRISMNKPVRVSIPVDY--QGTAAGTKSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + ++P ++ D++ L+IGD + + D+++PE + + +AT+ Sbjct: 121 GILQTQVTEIEVEGLPGDLPTTLEADVSALEIGDKLTVADLKVPEGITLHASEEEILATV 180 Query: 185 VAP 187 + P Sbjct: 181 IVP 183 >gi|242371669|ref|ZP_04817243.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] gi|242350618|gb|EES42219.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] Length = 218 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++ + NIP+SI VD+++L+I DS + D+++ + + +I Sbjct: 117 EGGVVEQPLFDLEVTATPENIPESIEVDISELQINDSFSVADVKISGDFTIENDPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|157690834|ref|YP_001485296.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pumilus SAFR-032] gi|166987890|sp|A8F919|RL25_BACP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157679592|gb|ABV60736.1| stress induced RNA binding ribosomal protein L25p family [Bacillus pumilus SAFR-032] Length = 208 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+ Sbjct: 2 ATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TLD+ E V+ + Q DP+ + L+HADF V + VPV+ I E+K G+K GG Sbjct: 61 TLDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGESK--GVKDGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L E+S+ +IP I D+ +L++ D + + D+ + S Q+N +V Sbjct: 119 VLQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLPV----QSSYQVNNDPEEVV 174 Query: 186 API 188 A I Sbjct: 175 ASI 177 >gi|88801937|ref|ZP_01117465.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] gi|88782595|gb|EAR13772.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] Length = 199 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 9/159 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS--KRLYSKNFM 61 K + R+ VGK + + LR G +P +IYG K + SA++++ K +Y+ N Sbjct: 2 KSITIKGSKRESVGKVATKALRNAGMVPCVIYGG---GKLVHFSAEELAFKKLVYTPNVY 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + +D + + I KD Q PV+D +IHADF Q+ E +T+ +PV SPG+ Sbjct: 59 TATIIVD--GQSIQTILKDIQFHPVTDRIIHADFYQLFEDKEITMRIPVNL--TGTSPGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 GG L ++ + N+PD + +++ L+IG + Sbjct: 115 LNGGSLRFTNRKLKVKALPANLPDFVNANISALRIGGKL 153 >gi|224026159|ref|ZP_03644525.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] gi|224019395|gb|EEF77393.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] Length = 198 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 10/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIA----LSAKDISKRLYS 57 K ++ +R + GK + LRKN +P ++YG D P+A ++ + +Y+ Sbjct: 2 KSIEIKGSLRTETGKKATHSLRKNNGVPCVLYGIQKDENGNPVATHFTVTTDGLRNLVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I ++V+ I KD Q PV+D ++H DFLQ+ E + + + VPV+ E Sbjct: 62 PHIY--VVDLNIDGKVVNAIMKDIQFHPVTDAILHVDFLQIDEANPIVMEVPVQL--EGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + G+K GGKL + ++ + N IP+ + VD+ L +G +I + ++ Sbjct: 118 AEGVKAGGKLALQIRKLKVKALYNVIPERLIVDVTSLGLGKTIKVGEL 165 >gi|284037806|ref|YP_003387736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] gi|283817099|gb|ADB38937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] Length = 188 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 9/164 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K+ ++ R +G+ ++ +R G +P ++YG + A I R +Y+ N Sbjct: 2 KKIEIVGYQRANLGRTESQAIRAEGNVPCVLYGGEEQ---VHFYAPAILFRDLIYTPNIF 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L ++ G E I ++ Q PVSD+L+HADFL V++ + + VPVR + +PG+ Sbjct: 59 EVALNIE-GAEY-RAILQEAQFHPVSDVLLHADFLLVTDKKPIKIAVPVRLV--GTAPGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++GGKL ++ + NIPD I VD+ L +G S+ + I Sbjct: 115 QKGGKLVTRVRKLRVKGTVENIPDFIDVDVTGLDLGKSVRVGQI 158 >gi|91217230|ref|ZP_01254191.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] gi|91184573|gb|EAS70955.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] Length = 206 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R+ VGK + + LR G++P +IYG + A S +K +Y+ + T Sbjct: 2 KSITINGSKRESVGKKATKALRNAGEVPCVIYGG-DNIVHFAASEVSFNKLIYTPDVHTV 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ +D G + V+ +D Q PV+D ++H DF + SEG +T+ +PV +E G+K Sbjct: 61 VVDID-GNKTTAVL-QDIQFHPVTDDILHIDFYEFSEGQEITMEIPVH--SEGSPKGVKN 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GG L + + A N+PD I D+ LKIG +++ Sbjct: 117 GGVLRFNLRRMMVRGLAKNLPDFILADVTPLKIGQKMYV 155 >gi|228469534|ref|ZP_04054527.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] gi|228308884|gb|EEK17559.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] Length = 200 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 88/152 (57%), Gaps = 5/152 (3%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL 73 D++GK + + LR+ +P ++YG S+ K + + A D++K +Y+ ++ LD+ + Sbjct: 5 DQLGKKATKALRREELVPVVLYGG-SETKHLVVKADDLNKLIYTPEIY--LIELDVEGKQ 61 Query: 74 VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE 133 + KD Q PVSD +HAD +VSE + + VPV I E + G++ GGKL Sbjct: 62 HKAVLKDVQFHPVSDKTLHADLYEVSEEKPIVMRVPV--ILEGHAIGVRAGGKLVREKRT 119 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + + + IP+++ +D+N+LK+G +I + ++ Sbjct: 120 LRVRAIYDKIPENLVIDVNNLKLGKTIQVHEL 151 >gi|304316109|ref|YP_003851254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777611|gb|ADL68170.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 200 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 14/187 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + + K+ +L Sbjct: 4 VELEAVLRVP-GKNAARKLKEKGYIPAILYGKGMESIPLAVETGKL-RTIVQKHGRNVLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF--INENKSPGI-- 121 L + I KD Q D ++ LIH DF +VS + VP++ + +S G+ Sbjct: 62 NLVVNGATHQAILKDEQRDELTGKLIHIDFQRVSMNEKIEAAVPLKLEGVGVIESKGLLV 121 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 Q +LNV SL PD I VD+++LKIGD++ ++D+ +PE + + Sbjct: 122 QHQKWELNVESLPTSL-------PDEIVVDVSNLKIGDTLFVKDVNVPEGVEKVDDPDEV 174 Query: 181 IATIVAP 187 I TIVAP Sbjct: 175 ILTIVAP 181 >gi|145687759|gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana] Length = 251 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 16/176 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKN 59 + A+ R K GK A RK G++P+I++ + + + I++ A I K L + Sbjct: 47 IHAIARAKSGKNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSH 106 Query: 60 FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++ E V V+P+ L+ SD ++ F++ + + V VP+ Sbjct: 107 FLSRLFDLEVRPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPLI 166 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 F E+ SPG+K+G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 167 FRGEDVSPGLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKV 222 >gi|317124066|ref|YP_004098178.1| 50S ribosomal protein L25P [Intrasporangium calvum DSM 43043] gi|315588154|gb|ADU47451.1| LSU ribosomal protein L25P [Intrasporangium calvum DSM 43043] Length = 227 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 8/167 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KLSA R GKG+AR +R+ G IPA++YG+ + P I L D + L N + TI+ Sbjct: 5 TKLSAEKRTDFGKGAARKIRRAGNIPAVMYGHGTAPVHITLPGHDTFQALRHTNALLTIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +D GKE + + KD Q DP+ I+ H D + V +G VTV +PV E + Sbjct: 65 -VD-GKEAL-ALAKDIQRDPIKPIIEHVDLVVVRKGEKVTVEIPVHLEGEAAPETV---- 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + + + + A +IP+++ + + L G I + LPE T+ Sbjct: 118 -VTLDHSSLQVEAEATHIPENVVISIEGLPAGTQILAGAVTLPEGTT 163 >gi|295396693|ref|ZP_06806839.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] gi|294970439|gb|EFG46368.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] Length = 218 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + KL A +R+ GKG AR R G++P ++YG ++P ++ I + + N + I Sbjct: 3 DIKLEAELRENYGKGYARRTRAAGRVPGVLYGRGNEPAHLSFDGHAIMMAMKNPNSLVEI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T D GK + +D Q PV +IH DF+ V G + V +PV + E +PG Sbjct: 63 STAD-GKVKSLAVARDIQRHPVRRDIIHVDFIIVKRGEKIEVEIPVSPVGE-AAPGT--- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++V + +L IP+ + + D K+G+ + +D+ LPE Sbjct: 118 -LVSVETQTLRVLADPTQIPELFELSIEDRKVGEHVFAKDVELPE 161 >gi|296140892|ref|YP_003648135.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] gi|296029026|gb|ADG79796.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] Length = 202 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 99/170 (58%), Gaps = 8/170 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG+AR R++G +P ++YG+ ++P+ + + A+D + + K+ +L+ Sbjct: 6 KLTASVRTEFGKGAARRTRRDGLVPVVLYGHGTEPQHLTVVARDFAT-ILRKDGTNAVLS 64 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + + H D L + +G VTV VPV + + + G + Sbjct: 65 LDIDGKEQL-ALTKQVVVHPLRNYIEHTDLLVIKKGEKVTVSVPV-IVEGDPAGGTQVAQ 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 LN EV + A +IP++I V++++L++G I + +P + ++ Sbjct: 123 DLN----EVEIEADALSIPENIVVNVHNLEVGTQIAAGQLEVPAGVTVLT 168 >gi|116871593|ref|YP_848374.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740471|emb|CAK19591.1| ribosomal 50S general stress protein L25/Ctc [Listeria welshimeri serovar 6b str. SLCC5334] Length = 207 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ LR G++P IIYG S+ P+++ + ++ K + N + ++ Sbjct: 5 LEVQKRETTQHSEVTKLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFSV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ +YQ+DP+ D+L+H D L V V V V + + +PG+K GG L Sbjct: 64 TVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ AP Sbjct: 122 QQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPNNKDYVVQAEEEETVVTVSAP 181 >gi|314937292|ref|ZP_07844634.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] gi|313654588|gb|EFS18338.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] Length = 221 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ Sbjct: 117 EGGVVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|228476234|ref|ZP_04060937.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] gi|228269719|gb|EEK11218.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] Length = 218 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ Sbjct: 117 EGGVVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|150024258|ref|YP_001295084.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium psychrophilum JIP02/86] gi|166223680|sp|A6GVZ1|RL25_FLAPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149770799|emb|CAL42264.1| 50S ribosomal protein L25 [Flavobacterium psychrophilum JIP02/86] Length = 203 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 88/152 (57%), Gaps = 8/152 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFMTTILTLDIG 70 R+ VGK + + LR G +P ++YG +P+ SA + + + +Y+ N T ++ ++ G Sbjct: 11 RESVGKVATKALRNAGAVPCVLYGG---DQPVHFSADERAFKSLVYTPNAHTVVIEVEGG 67 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 K + + +D Q+ PV+D ++H DF Q+ E VT+ VPVR I SPG+ GG L + Sbjct: 68 KSY-NAVMQDIQVHPVTDKILHLDFYQLFEDKEVTMEVPVRII--GTSPGVLLGGVLRLN 124 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 ++ + N+PD + D++ L++G+ I++ Sbjct: 125 SRKLKVKALPANLPDFLDADISPLEMGNKIYV 156 >gi|15923491|ref|NP_371025.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50] gi|15926178|ref|NP_373711.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus N315] gi|21282185|ref|NP_645273.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MW2] gi|49485365|ref|YP_042586.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MSSA476] gi|57650042|ref|YP_185433.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus COL] gi|82750208|ref|YP_415949.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus RF122] gi|87162260|ref|YP_493188.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194261|ref|YP_499053.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266960|ref|YP_001245903.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH9] gi|150393006|ref|YP_001315681.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH1] gi|151220676|ref|YP_001331498.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. Newman] gi|156978829|ref|YP_001441088.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu3] gi|161508741|ref|YP_001574400.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142307|ref|ZP_03566800.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315230|ref|ZP_04838443.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730969|ref|ZP_04865134.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253735236|ref|ZP_04869401.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|255005294|ref|ZP_05143895.2| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424613|ref|ZP_05601041.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257427279|ref|ZP_05603680.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257429916|ref|ZP_05606302.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257432618|ref|ZP_05608980.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257435522|ref|ZP_05611572.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257794258|ref|ZP_05643237.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|258407225|ref|ZP_05680370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|258420808|ref|ZP_05683744.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|258424463|ref|ZP_05687342.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|258429618|ref|ZP_05688292.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|258446112|ref|ZP_05694273.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|258448020|ref|ZP_05696150.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|258452818|ref|ZP_05700813.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|258453834|ref|ZP_05701807.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|262049986|ref|ZP_06022845.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262052530|ref|ZP_06024727.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|269202121|ref|YP_003281390.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|282895109|ref|ZP_06303329.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|282903087|ref|ZP_06310979.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282904876|ref|ZP_06312736.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282907823|ref|ZP_06315661.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910139|ref|ZP_06317945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282913329|ref|ZP_06321120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282915819|ref|ZP_06323587.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282918282|ref|ZP_06326022.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282923033|ref|ZP_06330719.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282925576|ref|ZP_06333229.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|283768936|ref|ZP_06341845.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283957291|ref|ZP_06374749.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|284023510|ref|ZP_06377908.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus 132] gi|293500378|ref|ZP_06666230.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|293509316|ref|ZP_06668032.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|293515905|ref|ZP_06670595.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|294850361|ref|ZP_06791094.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|295407391|ref|ZP_06817188.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295427035|ref|ZP_06819672.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276154|ref|ZP_06858661.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MR1] gi|297246471|ref|ZP_06930311.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|304380518|ref|ZP_07363195.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|68053029|sp|Q5HIH4|RL25_STAAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153660|sp|Q99WA2|RL25_STAAM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153661|sp|Q7A7B3|RL25_STAAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153663|sp|Q6GBY7|RL25_STAAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153664|sp|Q7A1S4|RL25_STAAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893398|sp|Q2FJE0|RL25_STAA3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893399|sp|Q2YVY4|RL25_STAAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13700391|dbj|BAB41689.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus N315] gi|14246269|dbj|BAB56663.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu50] gi|21203621|dbj|BAB94321.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MW2] gi|49243808|emb|CAG42233.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284228|gb|AAW36322.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus COL] gi|82655739|emb|CAI80138.1| 50S ribosomal protein L25 general stress protein [Staphylococcus aureus RF122] gi|87128234|gb|ABD22748.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201819|gb|ABD29629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740029|gb|ABQ48327.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus JH9] gi|149945458|gb|ABR51394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus JH1] gi|150373476|dbj|BAF66736.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus str. Newman] gi|156720964|dbj|BAF77381.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu3] gi|160367550|gb|ABX28521.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725281|gb|EES94010.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726796|gb|EES95525.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|257272640|gb|EEV04760.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257275930|gb|EEV07398.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257279432|gb|EEV10027.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257282483|gb|EEV12616.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257285159|gb|EEV15276.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257788230|gb|EEV26570.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|257841183|gb|EEV65632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|257843200|gb|EEV67613.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|257845332|gb|EEV69367.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|257849677|gb|EEV73644.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|257855089|gb|EEV78031.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|257858710|gb|EEV81583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|257859504|gb|EEV82357.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|257864005|gb|EEV86760.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|259159577|gb|EEW44624.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|259161921|gb|EEW46504.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262074411|gb|ACY10384.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|269940072|emb|CBI48448.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TW20] gi|282314552|gb|EFB44939.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282317848|gb|EFB48217.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282320310|gb|EFB50652.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282322800|gb|EFB53120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282325987|gb|EFB56293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282328299|gb|EFB58574.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331993|gb|EFB61502.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282592480|gb|EFB97492.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|282596513|gb|EFC01473.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282762527|gb|EFC02667.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|283461117|gb|EFC08203.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283469793|emb|CAQ49004.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ST398] gi|283791215|gb|EFC30025.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|285816200|gb|ADC36687.1| LSU ribosomal protein L25p [Staphylococcus aureus 04-02981] gi|290921313|gb|EFD98371.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|291096338|gb|EFE26598.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|291467861|gb|EFF10371.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|294822785|gb|EFG39221.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|294967748|gb|EFG43780.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295129038|gb|EFG58667.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297176658|gb|EFH35920.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|298693831|gb|ADI97053.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus ED133] gi|302332214|gb|ADL22407.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus JKD6159] gi|302750392|gb|ADL64569.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340963|gb|EFM06886.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312828996|emb|CBX33838.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128629|gb|EFT84632.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS03] gi|315196184|gb|EFU26540.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS01] gi|323438733|gb|EGA96473.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O11] gi|323442055|gb|EGA99690.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O46] gi|329313220|gb|AEB87633.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus T0131] gi|329725045|gb|EGG61540.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21172] gi|329729782|gb|EGG66179.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21189] gi|329731082|gb|EGG67454.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21193] Length = 217 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 20/171 (11%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LRK+G++PA++YG K++S ++ F+ I Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYG---------YGTKNVSVKVDEVEFIKVI 52 Query: 65 --------LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E Sbjct: 53 REVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE- 111 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ Sbjct: 112 -AVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKV 161 >gi|239825631|ref|YP_002948255.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. WCH70] gi|259646689|sp|C5D373|RL25_GEOSW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239805924|gb|ACS22989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. WCH70] Length = 210 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + R +R G IP I+YG D + I +S + K + + +++TL Sbjct: 5 LEAKERPDKKHSTLRRIRLQGNIPGILYGKNIDNQMIFVSGAALEKTI-REGGRHSLMTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 IG++ V+ ++ Q DP+ ++HADF V + V + V VR I E + G K GG L Sbjct: 64 KIGEKDYSVLLREIQRDPLRGNILHADFQAVDMSTEVDIDVDVRLIGE--AAGEKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 H++++ NIP SI +D++ L+IGD++ + DI K + + IATI+ P Sbjct: 122 QQNLHQLTIRVLPANIPPSIDIDISHLQIGDTVTVGDINTGGKYEIIDDPSEVIATILPP 181 >gi|297207396|ref|ZP_06923835.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887959|gb|EFH26853.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 219 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 20/190 (10%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LRK+G++PA++YG K++S ++ F+ I Sbjct: 4 ASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYG---------YGTKNVSVKVDEVEFIKVI 54 Query: 65 --------LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E Sbjct: 55 REVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE- 113 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ + Sbjct: 114 -AVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIEND 172 Query: 177 LNITIATIVA 186 + ++ T+VA Sbjct: 173 SSESVVTVVA 182 >gi|297591588|ref|ZP_06950225.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300910355|ref|ZP_07127808.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|297575457|gb|EFH94174.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300888344|gb|EFK83531.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|312436409|gb|ADQ75480.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH60] gi|320139412|gb|EFW31290.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA131] gi|320144189|gb|EFW35957.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA177] Length = 219 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 20/171 (11%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LRK+G++PA++YG K++S ++ F+ I Sbjct: 4 ASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYG---------YGTKNVSVKVDEVEFIKVI 54 Query: 65 --------LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E Sbjct: 55 REVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE- 113 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ Sbjct: 114 -AVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKV 163 >gi|229817598|ref|ZP_04447880.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] gi|229785387|gb|EEP21501.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] Length = 204 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 11/182 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R++ GKG AR LR G+IPA IY ++P +AL ++ + L N + +I + Sbjct: 7 LNGEARNEFGKGVARRLRVAGKIPATIYAGGTEPAYLALPMRETTLALRHTNALFSI-SF 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D G+ + V+ KD Q +PV I+ H DFL+V G + V VPV F+ G +G + Sbjct: 66 D-GQNKMAVV-KDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPV-FVE-----GQPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 V E+ + N+P+ I V++ L G + ++D+++PE M L ++ T+ Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVEGLTDGTKVLLKDVQMPEGAELDMDDLEESVVTVE 177 Query: 186 AP 187 P Sbjct: 178 VP 179 >gi|313156860|gb|EFR56300.1| ribosomal protein L25, Ctc-form [Alistipes sp. HGB5] Length = 189 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + AV R++ GK +A+ +R+ G +P ++ G+ + ++ ++I +Y+ N + Sbjct: 2 KTISVKAVKREEYGKKAAKAVRREGMVPCVLSGH-GESVAFSVDPREIKPLIYTPN--SY 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ D + + ++ Q PV + ++H DF ++++G V++ +PVR + G+K Sbjct: 59 IVEFDFDGKKEQAVLREAQFHPVREQILHLDFYRIADGKPVSIAIPVRLTGN--AEGVKV 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 GGKL + ++ + N+PD + VD+ L +G +I + D++ Sbjct: 117 GGKLALSARKLVVSALVENLPDELVVDVTTLGVGKTIFVGDLKF 160 >gi|49482728|ref|YP_039952.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MRSA252] gi|71153662|sp|Q6GJH0|RL25_STAAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49240857|emb|CAG39524.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MRSA252] Length = 217 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 19/167 (11%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI---- 64 S + + K + + LRK+G++PA++YG K++S ++ F+ I Sbjct: 6 SIIRQGKQTRSDLKQLRKSGKVPAVVYG---------YGTKNVSVKVDEVEFIKVIREVC 56 Query: 65 ----LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G Sbjct: 57 RNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 K+GG + + + +NIP++I VD+ +L I DS+ + D+++ Sbjct: 115 AKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKV 161 >gi|209523976|ref|ZP_03272528.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] gi|209495648|gb|EDZ95951.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] Length = 201 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 14/172 (8%) Query: 22 RLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 R LR+ G IPA++YG+ ++ + + + AK + T++ L+I GK L+ Sbjct: 17 RALRREGLIPAVLYGHKGAESEELTIDAKSAENLMKKGAVNHTLIQLNIPDLSWAGKALL 76 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGKLNVVCHE 133 ++ Q P H F V +V V +P+ FI E G+K GG L++V E Sbjct: 77 ----REVQTHPWKGFPYHLSFFSVGTLESVEVTIPLNFIGE--PIGVKNSGGMLDLVITE 130 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + C NIP++I V+++ L++GD++H+ +++LPE +++ + +A+I+ Sbjct: 131 VQVNCKPGNIPEAIDVEVSSLEVGDALHISELQLPEGVEVIAEADQVVASIL 182 >gi|313206746|ref|YP_004045923.1| LSU ribosomal protein l25p [Riemerella anatipestifer DSM 15868] gi|312446062|gb|ADQ82417.1| LSU ribosomal protein L25P [Riemerella anatipestifer DSM 15868] gi|315023817|gb|EFT36819.1| 50S ribosomal protein L25/general stress protein Ctc [Riemerella anatipestifer RA-YM] gi|325335815|gb|ADZ12089.1| Ribosomal protein L25 (general stress protein Ctc) [Riemerella anatipestifer RA-GD] Length = 202 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + R+ VGK S + LR +P ++YG +P + K +Y+ T Sbjct: 2 KSITIQGQKRESVGKKSTKALRDAELVPCVVYGG-KEPLHFSTEEKSFKNLVYTPEAHT- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +++++ E + + +D Q P++D ++H DF Q+S+ V + VPVR +S G+ Sbjct: 60 -VSIEVNGETIPAVLQDIQFHPITDRILHVDFYQLSDDKPVVMEVPVRIT--GRSRGVVA 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 GG L ++ + N+PD I +D+ L+IG+ ++ DI+ P+ T Sbjct: 117 GGVLRQSFRKLKVKALPANLPDEIVIDVTKLRIGNKTYVGDIKSPDYT 164 >gi|260912295|ref|ZP_05918846.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] gi|260633596|gb|EEX51735.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] Length = 200 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM--SDPKPIALS----AKDISKRLYS 57 +E ++ R +GK +++ +RK G IP +YG +D +P ALS ++ K +Y+ Sbjct: 2 REINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGQPEALSFAVPMAELRKVVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LDI + I K+ Q PV+D L+HADF +++E ++ + +PV + Sbjct: 62 PHIY--VVNLDIDGQKHTAIMKELQFHPVTDALLHADFYEINEEKSIAIGIPVNLV--GL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G++ GG+L++ ++ + P IP+ + +D+ L IG SI ++ Sbjct: 118 AQGVRDGGRLSLSIRKLVVKAPYKQIPEKLDIDVTALTIGKSIKAGEVSF 167 >gi|299531512|ref|ZP_07044918.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] gi|298720475|gb|EFI61426.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] Length = 207 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 89/163 (54%), Gaps = 2/163 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 2 QFVATERAKQGTGASRRLRLSGKTPGIVYG-AGEAQLIEIDHNALWHAVHKEAFHSSILD 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 61 MEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVENC 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP Sbjct: 121 TVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLP 163 >gi|170782787|ref|YP_001711121.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. sepedonicus] gi|169157357|emb|CAQ02544.1| probable 50S ribosomal protein L25 [Clavibacter michiganensis subsp. sepedonicus] Length = 214 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 8/161 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N I+TL Sbjct: 6 LSAELRTQFGKGAARKIRAVGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN---QIITL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI V+ KD Q DPV I+ H D + V G V V VP+ E+ PG Sbjct: 63 DIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRRGERVEVEVPIHVEGES-YPGTIH---- 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 N+ +++ A +IP+ TV + + G I + + LP Sbjct: 118 NLENTSITVDVEATHIPERFTVSIEGFEEGTQITVGQVDLP 158 >gi|225166107|ref|ZP_03727838.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] gi|224799649|gb|EEG18147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] Length = 250 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 11/168 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R + G+ ++R +RK QIPAI+YG + P+ +A+ A + +K L + + I+ L Sbjct: 8 LNVAPRAQTGRSASRRVRKANQIPAILYGKHTKPETLAVDAPEFAKLLKAVAGRSLIIEL 67 Query: 68 DI------GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 K L + ++ Q DP++D +H D +V + ++VPV + E S G+ Sbjct: 68 HRKDKATDNKALSFL--QEVQRDPITDRFLHVDLQEVKADEKMDINVPVSLVGE--SFGV 123 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 K Q G L++ H + + C ++P I VD+ +LK G+SI + I+ P Sbjct: 124 KNQNGVLDINAHTLRIRCLPKDLPPHIEVDVTELKAGESIKVGSIKAP 171 >gi|256420579|ref|YP_003121232.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] gi|256035487|gb|ACU59031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] Length = 193 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 97/176 (55%), Gaps = 10/176 (5%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFMTTILTLDI 69 +R + GK + R R GQ+P +IYG + ++ SA +S + +Y+ +F + + + Sbjct: 10 LRSEFGKKATRQARSEGQVPCVIYGG---AETVSFSAPAVSFKNLIYTPDFQ--LAEIKL 64 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 G ++ + KD Q D V+D L H DFL++ E V V +P+R + + S G+K GGKL V Sbjct: 65 GSKVYRCVLKDKQFDTVTDELSHIDFLELVEDKPVAVTLPIRIVGQ--SEGVKAGGKLVV 122 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + ++I V +++L++ +I +ED+ + E ++ I IA++V Sbjct: 123 KIKALKVKALPKYLRENIEVSIDNLELNGNIRVEDV-VAENIEILNSPRIPIASVV 177 >gi|223044426|ref|ZP_03614459.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] gi|222442215|gb|EEE48327.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] Length = 219 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++ + NIP+SI VD+++L+I DS + D+++ + + +I Sbjct: 117 EGGVVEQPLFDLEVSATPENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|167036980|ref|YP_001664558.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039691|ref|YP_001662676.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter sp. X514] gi|256750623|ref|ZP_05491509.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300915060|ref|ZP_07132375.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307724983|ref|YP_003904734.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|320115398|ref|YP_004185557.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226736371|sp|B0K775|RL25_THEP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736372|sp|B0K664|RL25_THEPX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166853931|gb|ABY92340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X514] gi|166855814|gb|ABY94222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750463|gb|EEU63481.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300888784|gb|EFK83931.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307582044|gb|ADN55443.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|319928489|gb|ADV79174.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 201 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 5/185 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 + + A+ RD GK +AR L+ G IPAI+YG M++ P+A+ + +RL K+ Sbjct: 2 QSVSIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNKL-QRLLQKHGRN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L + + + + K+ Q D + +IH DF +VS + VP++F E Sbjct: 60 VLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKF--EGTGLIES 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 118 RGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIVV 177 Query: 183 TIVAP 187 +++AP Sbjct: 178 SVLAP 182 >gi|264676949|ref|YP_003276855.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] gi|262207461|gb|ACY31559.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] Length = 207 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 89/163 (54%), Gaps = 2/163 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 2 QFVATERAKQGTGASRRLRLSGKTPGIVYG-AGEAQLIEIDHNALWHAVHKEAFHSSILD 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 61 MEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGTAESPAVKVENC 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP Sbjct: 121 TVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLP 163 >gi|311070699|ref|YP_003975622.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] gi|310871216|gb|ADP34691.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] Length = 205 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + S R +R +G +P IIYG + P++L + ++ K L + TI+ Sbjct: 2 ATLKAKERTDFKRSSLRKIRTSGHVPGIIYGKETTNTPVSLDSIELIKTLRDEG-KNTII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+DI + V+ + Q DP+ + + HADF V+ + V VP+ E S G+K+GG Sbjct: 61 TIDIDGKKHAVMVSELQTDPLKNEVTHADFQVVNMSEDIEVDVPIHLTGE--SVGVKEGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L +E+S+ IP SI D++ L I D + + D+ + S + + +A+I+ Sbjct: 119 VLQQPLYELSVKAKPKAIPQSIEADISGLDINDVLTIADLSADGEYSFNHESDEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|297626907|ref|YP_003688670.1| ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922672|emb|CBL57249.1| Ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 219 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+A R++ GKG+AR +R+ +IPA++YG+ +DP + L L + N + I Sbjct: 3 EIELNAEPRNEFGKGAARRIRREDKIPAVLYGHGTDPVHLTLPGHQTLLALRTANALLNI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 G E + +PK Q DP+ + H D L+V G VTV VP+ F+ I Sbjct: 63 HVE--GDEDLLALPKQVQRDPIKGFIKHVDLLRVRRGEKVTVEVPLEFVGVASPEAI--- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +N ++++ IP+ I ++ +++GD + I LP I + Sbjct: 118 --INEERTQLAIQAEITAIPNRIEASIDGMEVGDQLLAGQITLPAGAELEDDPETLILSA 175 Query: 185 VAPIS 189 VA IS Sbjct: 176 VAQIS 180 >gi|310643470|ref|YP_003948228.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Paenibacillus polymyxa SC2] gi|309248420|gb|ADO57987.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus polymyxa SC2] Length = 213 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%) Query: 18 KGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 KGSA R LR G+IPA++YG+ + P+ + AK+ +K + + LT++ G E + V Sbjct: 19 KGSAIRGLRLKGRIPAVVYGSEIEGTPVHVDAKEFNKVVRTGRSEVFNLTVE-GGETIPV 77 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 I KDYQ + +HADFL++S+ + V V + + + G K GG L V EV + Sbjct: 78 IIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKTGGILQVQETEVEV 133 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++P +I VD++ L IGD + D++LP+ + +A+++ P Sbjct: 134 EGLPSDLPSTIEVDVSALDIGDKLSASDLKLPKGVTLHVSEEELLASVIVP 184 >gi|206901159|ref|YP_002250500.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] gi|226736310|sp|B5YD92|RL25_DICT6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206740262|gb|ACI19320.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] Length = 207 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDIS---KRLY 56 M+ E KL RDK+GK A+ R++ IP ++YG ++ + + + KD+ K+ + Sbjct: 1 MEITEIKLKK--RDKIGKQYAKKYRRSNLIPGVVYGAHLKENIHVLVEKKDLWNLIKKGH 58 Query: 57 SKNFMTTILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 SK L ++ G+ + + I +D Q+DP+ D L+H DF VS V V+VPV + Sbjct: 59 SKEQHILRLIIEDGENTITENAILQDIQIDPIKDDLLHVDFHAVSLEEVVDVYVPVVLVG 118 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 E+K G+KQGG L E+ + ++P I VD+ DL+IGDSI + D+ LPE + Sbjct: 119 ESK--GVKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGDSITVGDLNLPENIKVL 176 Query: 175 SQLNITIATIVAP 187 + + I I+ P Sbjct: 177 TPADEVIVNIIPP 189 >gi|154684571|ref|YP_001419732.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens FZB42] gi|166223662|sp|A7Z0H5|RL25_BACA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154350422|gb|ABS72501.1| Ctc [Bacillus amyloliquefaciens FZB42] Length = 202 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +R +G +P IIYG P++L + ++ K L + TI+ Sbjct: 2 ATLKANERTDFKRSTLRKIRHSGHVPGIIYGKEITNTPVSLDSVELLKTLRDEG-KNTII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+D+ V+ D Q DP+ + L HADF V+ + VP++ E K G+K GG Sbjct: 61 TIDVNGNQQSVMVTDLQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGEAK--GVKDGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 119 VIQQPLHELSIKAKPKDIPQTINVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|284989492|ref|YP_003408046.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] gi|284062737|gb|ADB73675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] Length = 234 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L A R + GKGSAR R+ G+IPA++YG+ D ++L A++ + L + I Sbjct: 3 DFRLVAEARTEFGKGSARRTRRAGRIPAVLYGHGQDVVHLSLPAREFAAALRNGGSNALI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + G+E + + K Q DP++ + H D L V G TV VP+ + E PGI Sbjct: 63 TVVLDGEEQL-ALTKAVQRDPLTRVHEHVDLLLVRRGERTTVDVPIVVVGE---PGIDA- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 N + VS+ A N+PD+I VD+ G +I DI LP ++ Sbjct: 118 -IPNHQLNTVSIEADATNLPDTIEVDVTGRTAGQNITAGDIVLPRGST 164 >gi|319891454|ref|YP_004148329.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|317161150|gb|ADV04693.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|323465376|gb|ADX77529.1| ribosomal protein L25 [Staphylococcus pseudintermedius ED99] Length = 216 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 5/179 (2%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK-RLYSKNFMTTILTL 67 S + + K +G R +R+ G++PA++YG + K +++ ++ +L + ++ L Sbjct: 6 SIIRQGKQTRGDLRKIREAGKVPAVVYGYGT--KNVSVKVDEVEFIKLIREVGRNGVIEL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ D + + + H DFL ++ TV VPV I E +PG K+GG + Sbjct: 64 GVGSKQIKVMVSDYQYDSLKNQITHIDFLAINMTEERTVEVPVHLIGE--APGAKEGGVV 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP+ I VD+++L I DS+ + D+++ + ++ TI ++VA Sbjct: 122 EQPLFNLEITATPDSIPEYIEVDISELNINDSLSVADVKVSGDFTIENEAEDTIVSVVA 180 >gi|188575471|ref|YP_001912400.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519923|gb|ACD57868.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 179 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 +YG +P I L+ + I ++ F ++IL L++ ++ V+ +D Q P +++H Sbjct: 1 MYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGDVQQVLLRDIQRHPFKQLIMHI 60 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH---EVSLLCPANNIPDSITVD 150 DF +VS ++ VP+ FINE SP K VV H EV ++C ++P+ I VD Sbjct: 61 DFQRVSANQKLSAAVPLHFINEEASPAGKSSEV--VVTHELNEVQVVCLPKDLPEFIEVD 118 Query: 151 LNDLKIGDSIHMEDIRLP 168 L L++G+ IH+ +I+LP Sbjct: 119 LGALEVGNVIHLSEIKLP 136 >gi|198277115|ref|ZP_03209646.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] gi|198269613|gb|EDY93883.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] Length = 198 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 10/187 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ +R + GK + R LRK+ +P ++YG D ++ +N + T Sbjct: 2 KSIEIKGSLRTETGKKATRELRKDNGVPCVLYGTQKDENGNQVATHFTVPTEGLRNLVYT 61 Query: 64 ----ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E + Sbjct: 62 PHIYVVDLNIDGKIVNAIMKDIQFHPVTDKILHVDFYQIDESKPIVMEVPVKL--EGLAE 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K GGKL + ++ + N IP+ + VD+ L +G +I + ++ K + LN Sbjct: 120 GVKAGGKLALQIRKLKVKALYNVIPERLVVDVTPLGLGKTIKVGEL----KYEGLELLNA 175 Query: 180 TIATIVA 186 A + A Sbjct: 176 KEAVVCA 182 >gi|154494974|ref|ZP_02033979.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] gi|154085524|gb|EDN84569.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] Length = 194 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 12/172 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 ++ K +++A D+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 6 LEGKSREVAATSADQ--KRALKAMRKNNEIPAVLYGG-EKVSHFTITKDSVRNLVYSPEI 62 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 LT+D GK+ + ++ KD Q PV+D ++H DFL+VSE V + VPV + E + G Sbjct: 63 FVVELTID-GKKTMAIV-KDIQFQPVTDAILHMDFLEVSENKPVVMEVPV--VLEGHAEG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-----SIHMEDIRL 167 +K GGKLN+ ++ + IP+ + ++++ L +G ++H E + L Sbjct: 119 VKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHFEGLEL 170 >gi|327438089|dbj|BAK14454.1| ribosomal protein L25 [Solibacillus silvestris StLB046] Length = 217 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 3/159 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ + LR GQ+ ++YG ++ PI+L +D +K + + T++ + Sbjct: 5 LQATKRETGKRSILSQLRNEGQLAGVLYGYETETTPISLDYRDTAKAVQTYG-TTSVFKI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ + D Q D + + H DFL ++ + V VP+ FI S G+K+GG + Sbjct: 64 EVGGKRVNAVLTDIQRDALKGHVKHVDFLAINMKEELEVDVPIAFIG--TSVGVKEGGVI 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 H + + + IPD+I +D++DL +G+S+ + ++R Sbjct: 122 TQPNHTLKIKVNPSKIPDTIEIDVSDLAVGESLSVGNVR 160 >gi|148273454|ref|YP_001223015.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831384|emb|CAN02342.1| 50S ribosomal protein L25 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 214 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 8/180 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N I+TL Sbjct: 6 LSAELRTQFGKGAARKIRAIGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN---QIITL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI V+ KD Q DPV I+ H D + V +G V V VP+ E+ PG Sbjct: 63 DIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRQGERVEVEVPIHVEGES-YPGTIH---- 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 N+ +++ A +IP+ V + + G I + LP + ++ + I P Sbjct: 118 NLEYTSITVDVEATHIPERFVVSIEGFEEGTQITAGQVDLPAGATLVTDPETLVLAISVP 177 >gi|284051744|ref|ZP_06381954.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira platensis str. Paraca] gi|291572085|dbj|BAI94357.1| 50S ribosomal protein L25 [Arthrospira platensis NIES-39] Length = 201 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 14/172 (8%) Query: 22 RLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 R LR+ G IPA++YG+ ++ + + + AK + T++ L+I GK L+ Sbjct: 17 RALRREGLIPAVLYGHKGAESEELTIDAKTAENLMKKGAVNHTLIQLNIPDLSWAGKALL 76 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGKLNVVCHE 133 ++ Q P H F + +V V +P+ FI E G+K GG L++V E Sbjct: 77 ----REVQTHPWKGFPYHLSFFSIGTLESVEVTIPLNFIGEPM--GVKNSGGMLDLVITE 130 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + C NIP++I V+++ L++GD++H+ +++LPE +++ + +A+I+ Sbjct: 131 VQVNCKPGNIPEAIDVEVSALEVGDALHIHELKLPEGVEVIAEADQVVASIL 182 >gi|327534405|gb|AEA93239.1| 50S ribosomal protein L25 [Enterococcus faecalis OG1RF] Length = 202 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNSYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|315148326|gb|EFT92342.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4244] Length = 202 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|158312637|ref|YP_001505145.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] gi|158108042|gb|ABW10239.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] Length = 208 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 5/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + + Sbjct: 3 EVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTNVL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL++ + +PK+ Q P+ H D + V+ G V+V V + I E + Sbjct: 63 LTLELSGQTELALPKEVQRHPIRGSYEHVDLVLVNRGEHVSVEVALVLIGEADPDTL--- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ +S+ A ++PD I VD+ L+ G I + LP+ Sbjct: 120 --VDQQVTALSVKADAASLPDRIEVDITGLEAGHGITAAQLELPQ 162 >gi|258647538|ref|ZP_05735007.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] gi|260852318|gb|EEX72187.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] Length = 206 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 91/168 (54%), Gaps = 10/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK------PIALSAKDISKRLYS 57 K+ +S V R +VGK + + LR+ G IP +YG + A+S KD K +Y+ Sbjct: 2 KQISISGVKRTEVGKRATKALRREGLIPCNLYGQQKNENGEAVAMAFAISEKDAQKLIYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ ++I E + ++ Q PV D ++H DFL+V + + VP++ + Sbjct: 62 PHIY--LVDINIDGEDHKAVLRESQFHPVKDNILHIDFLEVHAERPIVIGVPIQ--TQGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + G++ GG+L + ++++ +IP+ + +D+ +LK+G SI + D+ Sbjct: 118 AEGVRAGGRLMTLIRKINVRALYQDIPEKLQIDVTELKLGKSIKVGDL 165 >gi|319949668|ref|ZP_08023702.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] gi|319436659|gb|EFV91745.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] Length = 209 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R++ ++PA++YG+ ++P+ + L A + + L +LT Sbjct: 6 KLAATVRTEFGKGASRRARRDFKVPAVLYGHNTEPRHLLLGALEFAAILRHAG-TNALLT 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E +PK + P++ ++ H D + V +G V V + V + +PG Sbjct: 65 LDIEGEEQLALPKQIDVHPLTRVIEHTDLIVVRKGEKVVVEIAV-LVTGEAAPGTLVTTD 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +V+ EV L NIP+ V + D + G I D+ LP + +S + ++ Sbjct: 124 ADVIEVEVDAL----NIPEDFEVSVEDAQAGTQITAADVTLPAGATLISDPETLLVNVME 179 Query: 187 PISGS 191 SG+ Sbjct: 180 APSGA 184 >gi|296131718|ref|YP_003638965.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola sp. JR] gi|296030296|gb|ADG81064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola potens JR] Length = 217 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL R + LR +G+IPA+IYG K + + +++ L + I Sbjct: 3 EVKLRVQPRPNKTRSYKHWLRNHGKIPAVIYGKDLPNKLVEVDVRNLESILRNGAGKNAI 62 Query: 65 LTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L + + H V+ KD Q DPV L+H D ++S + VP+ E + GI Sbjct: 63 INLTVEEAKPHKLTVMIKDLQRDPVKGDLMHVDLQKISLTDKIHTTVPIHLTGE--AEGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C NIPD I+VD++ L IGDS+ + DI + + + I Sbjct: 121 KKGGILQSGLRELEIECVPANIPDHISVDISGLDIGDSLTVADIAGQDGFTVKNDPATVI 180 Query: 182 ATIVAP 187 +IV+P Sbjct: 181 VSIVSP 186 >gi|308171943|ref|YP_003918648.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|307604807|emb|CBI41178.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|328551753|gb|AEB22245.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens TA208] gi|328910013|gb|AEB61609.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens LL3] Length = 202 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +R +G +P IIYG + P++L + ++ K L + TI+ Sbjct: 2 ATLKANERTDFKRSTLRKIRHSGHVPGIIYGKETTNTPVSLDSVELLKTLRDEG-KNTII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+D+ V+ + Q DP+ + L HADF V+ + VP++ E K G+K GG Sbjct: 61 TIDVNGNQQSVMVTELQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGEAK--GVKDGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 119 IIQQPLHELSIKAKPKDIPQTIDVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|315645850|ref|ZP_07898971.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315278611|gb|EFU41925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 208 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 99/183 (54%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R++ + S R+LR+NG IP ++YG + P+A+ KD SK ++ + + Sbjct: 7 VQLKADVRNEFTRASRRVLRENGGIPGVVYGAGEESIPVAVDFKDTSKLFHTGR--SEVF 64 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI G + V+ KD Q + + H DFL++S V V + V F + + G K G Sbjct: 65 QLDIPGSGKIPVLIKDIQKRRGN--VSHVDFLRISMNKPVRVSIGVDF--QGTAVGTKSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + + ++P ++ VD++ L+IGD + + DI++P+ + + +A++ Sbjct: 121 GILQTQLNAIDVEGLPGDLPSTLEVDVSALEIGDKLTVADIKVPKGITLHASEEEVLASV 180 Query: 185 VAP 187 + P Sbjct: 181 IVP 183 >gi|315161889|gb|EFU05906.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0645] Length = 202 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|221068918|ref|ZP_03545023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] gi|220713941|gb|EED69309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] Length = 207 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 89/163 (54%), Gaps = 2/163 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F +++L Sbjct: 2 QFVATERAKQGTGASRRLRLSGKTPGIVYG-AGEAQLIEIDHNALWHAVHKEAFHSSVLD 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +++ ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 61 MEVNGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVENC 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP Sbjct: 121 TVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLP 163 >gi|217076515|ref|YP_002334231.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] gi|226736370|sp|B7IFM6|RL25_THEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217036368|gb|ACJ74890.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] Length = 217 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 104/187 (55%), Gaps = 10/187 (5%) Query: 8 LSAVMRDKVGKGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A++R VGK A R LR+ G +P ++YG +P I++ ++ K L+ + +I++ Sbjct: 6 LEALVRSVVGKKRAVRRLRRQGFVPGVVYGPDVEPLSISIKRSNLIK-LFHEVTEASIIS 64 Query: 67 LDI----GKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + GKE+ V K+ Q D ++D + H DF +G + +++P+ F+ K+ G Sbjct: 65 LTVKDENGKEVFSHDVFIKNVQYDKLTDEVKHVDFYAPEKGHKMKINLPLEFVG--KAKG 122 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++GG L + HE+ + N + + + +D+++L +G +++++D++LPE + Sbjct: 123 EEKGGVLEIHHHELPVETLPNAVVEKLEIDVSNLDLGQALYVKDLKLPEGMEAELDEEEI 182 Query: 181 IATIVAP 187 IA + P Sbjct: 183 IAIVSTP 189 >gi|212691832|ref|ZP_03299960.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|237708038|ref|ZP_04538519.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|237724811|ref|ZP_04555292.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D4] gi|265756187|ref|ZP_06090516.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] gi|212665588|gb|EEB26160.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|229437006|gb|EEO47083.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides dorei 5_1_36/D4] gi|229457866|gb|EEO63587.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|263233778|gb|EEZ19387.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] Length = 198 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALSAKDISKRLYSKNFM 61 K ++ +R VGK + LRKN +P ++YG D P+A ++ L +N + Sbjct: 2 KSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGL--RNLV 59 Query: 62 TT----ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 T ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E Sbjct: 60 YTPHIYVVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQL--EGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + G++ GGKL + ++ + N IP+ + VD+ L +G +I + ++ Sbjct: 118 AEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTIKVGEL 165 >gi|315166971|gb|EFU10988.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1341] Length = 202 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKSINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|229548761|ref|ZP_04437486.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257421071|ref|ZP_05598061.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|312951809|ref|ZP_07770700.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|229306101|gb|EEN72097.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257162895|gb|EEU92855.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|310630212|gb|EFQ13495.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|315154236|gb|EFT98252.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0031] gi|315156368|gb|EFU00385.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0043] Length = 202 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PAI+YG + PI KD+SK L ++ T++ + + ++ ++ + QL Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKIL-REHGANTVIKITVDEKNINTLMSKAQL 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + ++H +FL V+ T V V+ I E S G+K GG L + V + + + Sbjct: 80 DTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPE 169 P+SI VD+ +L+IGD++ + D LPE Sbjct: 138 PESIEVDITNLEIGDALTIAD--LPE 161 >gi|188584704|ref|YP_001916249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] gi|226736340|sp|B2A3N5|RL25_NATTJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179349391|gb|ACB83661.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 215 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD+KE ++ R K + LR N +IPA++YG + K +++ +++ L + Sbjct: 1 MDRKELQVKE--RTVTRKSEVKKLRTNNEIPAVLYGKNIESKKLSIEKRELLDALSTAAG 58 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L L + E I K+ Q DP+ IH DF + T+ V VP+ E + Sbjct: 59 DNVLLDLKLDNGESYPAIFKEIQKDPIKGFFIHIDFHTIDLKETLQVSVPLNI--EGEPV 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG E+ + C IPD I VD++++ + +SI++ D+ LPE + +++ Sbjct: 117 GVENGGIPQYQLREIEIECLPTQIPDHIEVDVSNIDLNESINVGDLPLPEGSELVTEPEE 176 Query: 180 TIATIVA 186 T+ ++VA Sbjct: 177 TVMSVVA 183 >gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis V583] gi|227517790|ref|ZP_03947839.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227554936|ref|ZP_03984983.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255973896|ref|ZP_05424482.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256617695|ref|ZP_05474541.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256761581|ref|ZP_05502161.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256957316|ref|ZP_05561487.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256959948|ref|ZP_05564119.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256964357|ref|ZP_05568528.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|257077688|ref|ZP_05572049.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|257081067|ref|ZP_05575428.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|257083739|ref|ZP_05578100.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|257086164|ref|ZP_05580525.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|257089237|ref|ZP_05583598.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257415387|ref|ZP_05592381.1| ribosomal protein L25 [Enterococcus faecalis AR01/DG] gi|257418421|ref|ZP_05595415.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|293384300|ref|ZP_06630186.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|293388464|ref|ZP_06632970.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294779202|ref|ZP_06744609.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|300859682|ref|ZP_07105770.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|307270120|ref|ZP_07551438.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|307271421|ref|ZP_07552694.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|307284347|ref|ZP_07564512.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|312901641|ref|ZP_07760911.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|312905053|ref|ZP_07764178.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|312907105|ref|ZP_07766098.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|312979316|ref|ZP_07791014.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|68053202|sp|Q837L6|RL25_ENTFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29342869|gb|AAO80633.1| ribosomal protein L25 [Enterococcus faecalis V583] gi|227074751|gb|EEI12714.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227175932|gb|EEI56904.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255966768|gb|EET97390.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256597222|gb|EEU16398.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256682832|gb|EEU22527.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256947812|gb|EEU64444.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256950444|gb|EEU67076.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256954853|gb|EEU71485.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|256985718|gb|EEU73020.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|256989097|gb|EEU76399.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|256991769|gb|EEU79071.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|256994194|gb|EEU81496.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|256998049|gb|EEU84569.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257157215|gb|EEU87175.1| ribosomal protein L25 [Enterococcus faecalis ARO1/DG] gi|257160249|gb|EEU90209.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|291078373|gb|EFE15737.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|291082154|gb|EFE19117.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294453713|gb|EFG22108.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|295113967|emb|CBL32604.1| LSU ribosomal protein L25P [Enterococcus sp. 7L76] gi|300850500|gb|EFK78249.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|306503287|gb|EFM72539.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|306511885|gb|EFM80882.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|306513555|gb|EFM82169.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|310626882|gb|EFQ10165.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|310631632|gb|EFQ14915.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|311287910|gb|EFQ66466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|311291252|gb|EFQ69808.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|315027593|gb|EFT39525.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2137] gi|315031326|gb|EFT43258.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0017] gi|315035357|gb|EFT47289.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0027] gi|315145201|gb|EFT89217.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2141] gi|315151610|gb|EFT95626.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0012] gi|315170844|gb|EFU14861.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1342] gi|315172713|gb|EFU16730.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1346] gi|315575275|gb|EFU87466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309B] gi|315576567|gb|EFU88758.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0630] gi|315581358|gb|EFU93549.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309A] gi|329577703|gb|EGG59130.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1467] Length = 202 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|297172152|gb|ADI23133.1| ribosomal protein L25 (general stress protein Ctc) [uncultured gamma proteobacterium HF0770_09E07] Length = 238 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 96/165 (58%), Gaps = 2/165 (1%) Query: 7 KLSAVMRDKVGK-GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL A R+++G + + K+ ++P IIYG P+PI + ++ K + ++ +I+ Sbjct: 5 KLKAEKREEIGGLAPKKAIYKDNKVPGIIYGGKDQPQPIYVQKNELLKIISNEGLFNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I + +V+ K+ Q P ++ H D +V +G+ VTV VPV N++ G+K +G Sbjct: 65 EIEIESKKENVVFKEVQKHPSKNVFTHIDLQRVVKGTQVTVTVPVVLKNQDNCYGVKMEG 124 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G +N VC E+++L +IP+SI VD+ ++K +++ + + L E Sbjct: 125 GVINHVCKEITVLSSPESIPESIEVDMEEIKTKENVRLSSLSLNE 169 >gi|314932723|ref|ZP_07840093.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] gi|313654553|gb|EFS18305.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] Length = 219 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 7/168 (4%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILTLDIGKELVHVIPK 79 + LR +G++PA++YG + + + + K R +N ++ L +G + + V+ Sbjct: 19 KQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN---GVIDLGVGSKTIKVMVS 75 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG + ++ + Sbjct: 76 DYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEGGVVEQPLFDLEVSAT 133 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 NIP+SI VD+++L+I DS + D+++ + + +I T+V P Sbjct: 134 PENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIVTVVPP 181 >gi|216264210|ref|ZP_03436202.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] gi|215980683|gb|EEC21490.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] Length = 182 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|302534901|ref|ZP_07287243.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] gi|302443796|gb|EFL15612.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] Length = 196 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 92/176 (52%), Gaps = 14/176 (7%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KLSA +RD GKGSAR R++ P +IYG+ + PK + + A + L + N Sbjct: 1 MNMSEIKLSAKLRDSFGKGSARQSRRDALTPGVIYGHGTTPKHVGVEAHALMMALKTPN- 59 Query: 61 MTTILTLDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +L+LDI G EL VI K Q P+ ++H DFL V +G VTV VPV + Sbjct: 60 --ALLSLDIEGDGTEL--VISKAVQRHPLKRNILHVDFLIVQKGEKVTVEVPVVTEGD-- 113 Query: 118 SPGIKQGGKLNVVCHEVSLL-CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + GG L + A +IP +TV + L+ G SIH +D+ LP T+ Sbjct: 114 ---LAAGGNLLETLLTTITVEAEATHIPTEVTVSIEGLEAGASIHAKDLVLPAGTT 166 >gi|332291640|ref|YP_004430249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] gi|332169726|gb|AEE18981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] Length = 211 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 9/161 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK + + LR G +P ++YG + P+ SA +++ + +Y+ + Sbjct: 2 KSVSIHGSKRESVGKKATKALRNAGLVPCVVYGGDT---PLHFSAPELAFKELVYTPDAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + LD V I +D Q PV+D ++H DF Q+ EG VT+++PV F ++ G+ Sbjct: 59 TVEIELD--GVTVKAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFTGNSR--GV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GG L + + N+PD + D+ +LKIG+ +++ Sbjct: 115 MNGGVLRKTNRVLRVKALPKNLPDYLVADITNLKIGNKLYI 155 >gi|307266021|ref|ZP_07547568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] gi|306918983|gb|EFN49210.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] Length = 202 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 99/181 (54%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A+ RD GK +AR L+ G IPAI+YG M++ P+A+ + +RL K+ +L Sbjct: 6 IEAIKRD-TGKNAARCLKNQGYIPAILYGKGMAESIPLAVEYNAL-QRLLQKHGRNVLLN 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + + + K+ Q D + +IH DF +VS + VP++F E +GG Sbjct: 64 VIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKF--EGIGLIESRGGI 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + +++A Sbjct: 122 VQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIVVSVLA 181 Query: 187 P 187 P Sbjct: 182 P 182 >gi|220904720|ref|YP_002480032.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254801042|sp|B8J0S7|RL25_DESDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219869019|gb|ACL49354.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 199 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 7/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LS R+ GKG + LR IP + Y + + A + K +Y + TT+ Sbjct: 4 EKTLSVQKREGYGKGPSGRLRAQKLIPGVFYTPKGENISVQAPALPLQK-IYEEMGHTTV 62 Query: 65 LTLDI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L+I G++ + V+ Q P H DF V VTV VPV F+ ++ G Sbjct: 63 FNLEIEENGQKTAYPVLIWQVQFHPYKRAFTHIDFYGVDLDKEVTVDVPVEFVGTSR--G 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L V L N+P ITVD+ D+ I D+I + D++LPE + N Sbjct: 121 VKLGGVLETYREMVRLTSKPLNMPQKITVDVTDMGINDTISVGDLKLPENVRAEFDQNYA 180 Query: 181 IATIVA 186 + T+++ Sbjct: 181 LVTVIS 186 >gi|195942003|ref|ZP_03087385.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi 80a] gi|312149616|gb|ADQ29687.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi N40] Length = 182 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVRVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|315301103|ref|ZP_07872397.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] gi|313630524|gb|EFR98363.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] Length = 207 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++P IIYG S+ P+++ + ++ K + N + + + + ++V+ +YQ+ Sbjct: 21 LRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFAVTVDGKKLNVLLHEYQV 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 DP+ DIL+H D L V V V V + + +PG+K GG L + H+V + + Sbjct: 80 DPLKDILVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQQIIHDVKVSATPEKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPE 169 P++I +D++ L+IGD + D LPE Sbjct: 138 PETIELDISSLEIGDVLTTND--LPE 161 >gi|308070285|ref|YP_003871890.1| 50S ribosomal protein L25 [Paenibacillus polymyxa E681] gi|305859564|gb|ADM71352.1| Probable 50S ribosomal protein L25 [Paenibacillus polymyxa E681] Length = 213 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 6/171 (3%) Query: 18 KGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 KGSA R LR G+IPA++YG+ + P+ + AK+ +K + + LT++ G E + V Sbjct: 19 KGSAIRELRLKGRIPAVVYGSELEGTPVHVDAKEFNKVVRTGRSEVFNLTVE-GGETIPV 77 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 I KDYQ + +HADFL++S+ + V V + + + G K GG L V EV + Sbjct: 78 IIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKTGGILQVQETEVEV 133 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 ++P +I VD++ L +GD + D++LP+ + +A+I+ P Sbjct: 134 EGLPADLPSTIEVDVSALDVGDKLSASDLKLPKGVTLHVPEEELLASIIVP 184 >gi|148265701|ref|YP_001232407.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter uraniireducens Rf4] gi|189042359|sp|A5G7R6|RL25_GEOUR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146399201|gb|ABQ27834.1| LSU ribosomal protein L25P [Geobacter uraniireducens Rf4] Length = 194 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 6/188 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNF 60 +E L+ +R K GKG +R LR+N IP ++YG + P++LS K++S + +N Sbjct: 2 EERVLNVELRTKTGKGISRQLRRNNFIPGVVYGKGMESVPVSLSTKELSTAIAGEGGRNH 61 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ + ++ + Q D + H D +++ V V VPV + + G Sbjct: 62 LLTLKGGGGLDGQMVIVAELLQ-DCLKGTPRHVDLHKINMADKVRVKVPVNLVG--SAVG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+ HE+ + C +IP+ I VD+ +L IG S+H+ DI+ + ++ Sbjct: 119 VKEGGLLDFAMHEIEIECFPTHIPEHIDVDVTELTIGHSLHIGDIKELPGIKVLGDATVS 178 Query: 181 IATIVAPI 188 + +I+ + Sbjct: 179 VVSILGKV 186 >gi|229546665|ref|ZP_04435390.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256854329|ref|ZP_05559693.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|307276208|ref|ZP_07557338.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|307296166|ref|ZP_07575996.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|229308232|gb|EEN74219.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256709889|gb|EEU24933.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|306496140|gb|EFM65720.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|306507120|gb|EFM76260.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|315030511|gb|EFT42443.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4000] gi|315159965|gb|EFU03982.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0312] gi|323480002|gb|ADX79441.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 62] Length = 202 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|226321217|ref|ZP_03796751.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] gi|226233371|gb|EEH32118.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] Length = 182 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|294101746|ref|YP_003553604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] gi|293616726|gb|ADE56880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] Length = 217 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL--TLDI 69 R++ GK + + LR G +PA+ YG D + + A DI+ + S ++ T +L Sbjct: 12 RNEKGKQAVKKLRPTGYVPAVFYGPEYRDAVTVKVKASDIAAVIRSGHWETVRFNASLPN 71 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 G+E + ++ ++ Q + +++ +IH DF+Q+ +G + V++PV G+K GG + Sbjct: 72 GREEMCLM-RNIQRNLLNNEIIHIDFIQLLKGHKIAVNIPVVLEGREDCVGLKHGGIIEQ 130 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +EV + IP+S+++D++ L +G+ ++D+ LP+ + L + T+ P Sbjct: 131 LLYEVEIEVLPTEIPNSVSIDVSGLNVGEGFSVKDLALPKSADILVDLEELVVTVAQP 188 >gi|307289481|ref|ZP_07569429.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|306499577|gb|EFM68946.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|315164680|gb|EFU08697.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1302] Length = 202 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTVIKITVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + D LPE Sbjct: 137 LPESIEVDITNLEIGDALTIAD--LPE 161 >gi|268678853|ref|YP_003303284.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] gi|268616884|gb|ACZ11249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] Length = 178 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR++G + A IYG A A + K SK+ + I + Sbjct: 2 LEGIIRDSIEKKATKALRRDGYLIANIYGKGEQNINAAFKANEFIKAAKSKDSL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + +V+ +DYQ DPV+ L+H D G VPV+ + K G K G L Sbjct: 60 KVAGTEYNVVIQDYQRDPVNSNLLHVDLRIALPGVLTKYLVPVKTVGIPK--GTKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C A N+P+ TVD+++L +G++I + DI++P M + ++IA ++ Sbjct: 118 IQSKKRLAVKCTAENLPNDFTVDVSELDVGETILVRDIQVPANVKIMDETRVSIAGVI 175 >gi|296128741|ref|YP_003635991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] gi|296020556|gb|ADG73792.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] Length = 197 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A R + GKG+AR LR+ QIPA++YG+ + P +AL D L N + +I Sbjct: 3 EIKLAATARTEFGKGAARRLRRAHQIPAVLYGHGTQPLHVALPGHDTMLALKHSNALYSI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LD L I KD Q D V ++ H D L V +G V V V V+ + E+ S Sbjct: 63 -ELDGTSTL--AIVKDVQRDVVRQVIEHVDLLIVKKGEKVAVDVQVQVVGESAS------ 113 Query: 125 GKLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G ++VV +SL A N+P+S+ + ++ L+ G + ++ LPE + +S I Sbjct: 114 GTIHVVETQTLSLEALATNLPESVEISIDGLEAGTIVTAGEVTLPEGATLLSDPEQAIVA 173 Query: 184 IVAP 187 I P Sbjct: 174 ISEP 177 >gi|224532913|ref|ZP_03673524.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] gi|224512151|gb|EEF82541.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] Length = 182 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|150006312|ref|YP_001301056.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides vulgatus ATCC 8482] gi|254885161|ref|ZP_05257871.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294776297|ref|ZP_06741781.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|319641348|ref|ZP_07996043.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] gi|166223663|sp|A6L6X0|RL25_BACV8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149934736|gb|ABR41434.1| putative 50S ribosomal protein L25 [Bacteroides vulgatus ATCC 8482] gi|254837954|gb|EET18263.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294449884|gb|EFG18400.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|317387029|gb|EFV67913.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] Length = 198 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALSAKDISKRLYSKNFM 61 K ++ +R VGK + LRKN +P ++YG D P+A ++ L +N + Sbjct: 2 KSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGL--RNLV 59 Query: 62 TT----ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 T ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E Sbjct: 60 YTPHIYVVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQL--EGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + G++ GGKL + ++ + N IP+ + VD+ L +G ++ + ++ Sbjct: 118 AEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTVKVGEL 165 >gi|150006997|ref|YP_001301740.1| 50S ribosomal protein L25/general stress protein Ctc [Parabacteroides distasonis ATCC 8503] gi|255015967|ref|ZP_05288093.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 2_1_7] gi|256841992|ref|ZP_05547497.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262384248|ref|ZP_06077383.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298377422|ref|ZP_06987375.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|301308837|ref|ZP_07214789.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] gi|166223700|sp|A6L8V4|RL25_PARD8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149935421|gb|ABR42118.1| putative 50S ribosomal protein L25 [Parabacteroides distasonis ATCC 8503] gi|256736308|gb|EEU49637.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262293951|gb|EEY81884.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298265836|gb|EFI07496.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|300833361|gb|EFK63979.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] Length = 194 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 10/162 (6%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG 70 V R K + + +RKN +IPA++YG ++ + + K +Y+ L++D Sbjct: 14 VARSADQKRALKAMRKNNEIPAVLYGG-EKVTHFTVTKEAVRKLVYTPEIFVVELSIDGN 72 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 K + I KD Q PV+D ++H DFL+VS+ V + VPV + E + G+K GGKL++ Sbjct: 73 KTMA--IVKDMQFQPVTDEILHMDFLEVSKDKAVVMEVPV--VLEGHAEGVKAGGKLSLQ 128 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGD-----SIHMEDIRL 167 ++ + + IP+ +T++++ L +G ++H E + L Sbjct: 129 MRKLKVKAIYDQIPEKLTINVDHLGLGKTMQVGALHFEGLEL 170 >gi|226307812|ref|YP_002767772.1| 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] gi|259646694|sp|C1A348|RL25_RHOE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226186929|dbj|BAH35033.1| probable 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] Length = 202 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 97/184 (52%), Gaps = 8/184 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D ++ L ++ Sbjct: 3 EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFARILRAQG-TNA 61 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ILTLDI G E V + K + P+ + HAD L + +G VT+ V V + + + Sbjct: 62 ILTLDIEGTEQV-ALTKSVVVHPIRSYIEHADLLVIKKGEKVTIDVHVVVVGDAAA---- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + +S+ A +IP+ I V + L+IG I + LP + + + I Sbjct: 117 -GTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPAGSVLQADADTLIV 175 Query: 183 TIVA 186 +VA Sbjct: 176 NVVA 179 >gi|42524123|ref|NP_969503.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] gi|71153121|sp|Q6MJR4|RL25_BDEBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39576331|emb|CAE80496.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] Length = 212 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 7/175 (4%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGK 71 + GK ++R LR + +PA+IYG ++ P +++ K+I K R Y +N + + + D Sbjct: 13 ETGKHNSRGLRTSRNVPAVIYGAVT-PTNVSVGEKEIVKYNTRAY-ENALFNLKSSDKTA 70 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 + V+ K + P++ H DF + V V+V VR E K+ G+ +GG LNVV Sbjct: 71 NGIVVLIKSVDVHPLTRRPQHVDFFALDLKKAVRVNVEVRL--EGKAIGLSEGGLLNVVL 128 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V + C IP+ T D+++L +GD++H+ DI++ ++ TIA + A Sbjct: 129 RSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKVSGSVKMITGAEQTIAVVNA 183 >gi|326389777|ref|ZP_08211342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] gi|325994259|gb|EGD52686.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] Length = 202 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 99/181 (54%), Gaps = 5/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A+ RD GK +AR L+ G IPAI+YG M++ P+A+ + +RL K+ +L Sbjct: 6 IEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNAL-QRLLQKHGRNVLLN 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + + + K+ Q D + +IH DF +VS + VP++F E +GG Sbjct: 64 VIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKF--EGIGLIESRGGI 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + +++A Sbjct: 122 VQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIVVSVLA 181 Query: 187 P 187 P Sbjct: 182 P 182 >gi|218249528|ref|YP_002375285.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225549827|ref|ZP_03770790.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|226736282|sp|B7J0N2|RL25_BORBZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218164716|gb|ACK74777.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225369584|gb|EEG99034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|312147892|gb|ADQ30551.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi JD1] Length = 182 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|119715156|ref|YP_922121.1| 50S ribosomal protein L25P [Nocardioides sp. JS614] gi|119535817|gb|ABL80434.1| LSU ribosomal protein L25P [Nocardioides sp. JS614] Length = 223 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ A R + GKG+AR +R+ ++PA++YG+ +DP + L + L +L Sbjct: 4 KIKAEARTEFGKGAARRIRRADKVPAVVYGHGNDPVHLTLPGHETMMAL-KHGGANALLE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K Q+DP+ L H DF+ V G VTV VPV + + + Sbjct: 63 LDIDGKSQLALTKQVQIDPIKRHLEHIDFVAVKRGEKVTVEVPVHLVGD--------AAR 114 Query: 127 LNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V E + L A +IP+ I V + + G IH D+ +P Sbjct: 115 ETLVVTETATIQLEAEATHIPEHIEVSIEGAEAGTQIHASDLTIP 159 >gi|189347042|ref|YP_001943571.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium limicola DSM 245] gi|226736294|sp|B3EDG7|RL25_CHLL2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189341189|gb|ACD90592.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium limicola DSM 245] Length = 196 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 5/174 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K A LRKNG +PA+IY + ++++ ++K ++S L GK L Sbjct: 13 IRKKEAAKLRKNGIVPAVIYHKGEETVAVSVNEIALNKLVHSAESHIIDLQFPDGKTLRS 72 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 I KD Q DPVSD +IH DF + V + VPV S G+++GGK+ ++ H ++ Sbjct: 73 FI-KDVQFDPVSDRIIHTDFQLFAADEVVEMEVPVAI--SGDSIGVEKGGKILILRHALT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT--SSMSQLNITIATIVAP 187 + N+PD +T+D+ +L +G IH+ +I + T S M + + +I P Sbjct: 130 IQGLPANMPDHVTIDVTNLDMGHIIHVREIPMDAYTGLSIMDEPETPVISIAPP 183 >gi|313203697|ref|YP_004042354.1| LSU ribosomal protein l25p [Paludibacter propionicigenes WB4] gi|312443013|gb|ADQ79369.1| LSU ribosomal protein L25P [Paludibacter propionicigenes WB4] Length = 191 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 11/183 (6%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L +R +GK + + R +P ++YG +++ + +I K +YS Sbjct: 2 KTFDLKGTVRTDLGKKATKAERTVDNVPCVLYG-VAENVHFTTTVSEIRKLVYSPEVF-- 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ L+IG ++ I K Q PV+D ++H DFL ++E V V++PV+ E + G+K Sbjct: 59 VVNLEIGGKVTKAIMKALQFHPVTDKVLHMDFLAITEDKPVVVNLPVKL--EGLAEGVKA 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE------KTSSMSQL 177 GGKL + + + IP++I +D+ +L +G SI + + +P K + ++Q+ Sbjct: 117 GGKLALEMRNLKVKGLYTQIPENIVIDVTELGLGKSIQVAKVSVPNLEILNAKNAVVAQV 176 Query: 178 NIT 180 +T Sbjct: 177 KLT 179 >gi|124010550|ref|ZP_01695178.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] gi|123982281|gb|EAY23848.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] Length = 204 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 90/159 (56%), Gaps = 9/159 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K ++ R +GK S++ LR++G +P ++YG K + + I R +Y+ N Sbjct: 2 KTLEIIGYHRANLGKKSSKDLRRDGNVPCVLYGG---DKQVHFQSPMILFRDLVYTPNIH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L ++ K I +D Q PVS+I++HADFLQ+SE + + VPV+++ SPG+ Sbjct: 59 KVLLNVEGDK--YECILQDIQFHPVSEIIMHADFLQISEDKAIKMDVPVKYV--GTSPGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 GG+L +++ + +P+ I VD+++L++G S+ Sbjct: 115 IGGGRLVSKLNKLKVSALPTKMPEFIEVDISELELGKSV 153 >gi|329948076|ref|ZP_08294977.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] gi|328523215|gb|EGF50316.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] Length = 203 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R GKGSAR R+ GQ+P ++YG+ ++P+ L L S + Sbjct: 1 MANNAITLKAQVRTDFGKGSARQARRAGQVPVVVYGHGAEPRHFLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G+ L+ V+ KD Q P+ + H DFL V V V VPV I G Sbjct: 61 ALVELVIDGGETLL-VLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVI------G 113 Query: 121 IKQGGKLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G ++++ + + PA ++P++I VD+ + G + + DI L E ++S Sbjct: 114 TAAPGTMHMIEAATIMVSAPAVSVPEAIEVDITGVAAGTVLTIADITLSEGIEAVSDAET 173 Query: 180 TIATI 184 + + Sbjct: 174 AVVNV 178 >gi|68052993|sp|O51727|RL25_BORBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 183 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 8 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 67 DDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 125 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 165 >gi|111225611|ref|YP_716405.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia alni ACN14a] gi|111153143|emb|CAJ64890.1| 50S ribosomal protein L25 [Frankia alni ACN14a] Length = 219 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + + Sbjct: 15 EVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGTNVL 74 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL++ + KD Q P+ H D + V+ G V +PV+ + E + Sbjct: 75 LTLELADGTELALAKDVQRHPIKGSFEHIDLVLVNRGEKVVADIPVQVVGEPHPDTL--- 131 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ ++L A+ +P++I VD+ L+ G ++ + LPE Sbjct: 132 --VDQQVTSIALRADASRLPNAIEVDITGLEPGTAVLARQLALPE 174 >gi|89160905|gb|ABD62995.1| ribosomal protein L25 [Borrelia burgdorferi N40] Length = 189 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 31 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 89 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 90 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 147 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 148 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 188 >gi|226321251|ref|ZP_03796779.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] gi|226233283|gb|EEH32034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] Length = 182 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDISHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|161511075|ref|NP_212920.2| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi B31] Length = 182 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 7 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|218885592|ref|YP_002434913.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226736309|sp|B8DKL6|RL25_DESVM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218756546|gb|ACL07445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 191 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 7/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS RD +GKG+ R LR +P + Y PI + + K L+ TT+ + Sbjct: 7 LSVRKRDGLGKGANRKLRAKTLVPGVFYNAEGLNVPIEMDTLPVEK-LFEAVGRTTVFNI 65 Query: 68 DI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ G + H + Q PV + H DF V V + VP+ F K G+K Sbjct: 66 EVDDNGTKSTHPALFWQIQYHPVKNRFSHIDFRGVDLEKPVKIRVPLEFTGTAK--GVKV 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GGKL V + + +P IT+DL DL+IG +I + D+ L E +++ N I Sbjct: 124 GGKLEVYREALDISAKPLQMPSKITIDLTDLEIGKTISVNDLPLGEGVCAVADRNFAIVA 183 Query: 184 IVAP 187 +V+P Sbjct: 184 VVSP 187 >gi|303284975|ref|XP_003061778.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457108|gb|EEH54408.1| predicted protein [Micromonas pusilla CCMP1545] Length = 254 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 8/165 (4%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKN----FMTTILT 66 +RD G+ +A+ LRK G++PAI++ + S + I+L+ KDI +RL +K+ T +L Sbjct: 68 LRDASGRIAAKKLRKEGRVPAILFRSGSRAGEHISLALKDI-ERLVTKHGHVGVGTRVLK 126 Query: 67 LDI-GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + G + VI K L + ++ +A F+ V + V V VPV FI E+ PG+KQG Sbjct: 127 MRFEGTDRAEDVIAKQVHLTMGTGVVENATFMPVEPTTEVNVDVPVTFIGEDVCPGVKQG 186 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G V+ V + C +IP +D+++ +G + ++D+ +PE Sbjct: 187 GFPWVMRRSVPVKCQVKDIPRVFNIDVSNFSVGKVVFLKDLHVPE 231 >gi|326802495|ref|YP_004320314.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] gi|326553259|gb|ADZ81644.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] Length = 195 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R+ VGK A+ LR G++PA++YG + A+SA D+ +Y+ Sbjct: 2 KSIAISGSPRENVGKRDAKELRYAGKVPAVLYGG-GEQYHFAVSAADLKPLIYTPE--VN 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L+I + I ++ Q P++D +IH DFL +S+ V++++P+ SPG+K Sbjct: 59 FVDLEISGKKYQAIVQEAQYHPLTDQIIHVDFLALSDDKAVSMNIPIALTGT--SPGVKM 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GGKL ++ + ++P I V L L++G S+ + Sbjct: 117 GGKLVQKLRKLRVKALPKDMPQVIEVSLESLEVGKSVRV 155 >gi|193212458|ref|YP_001998411.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobaculum parvum NCIB 8327] gi|226736295|sp|B3QMQ8|RL25_CHLP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193085935|gb|ACF11211.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobaculum parvum NCIB 8327] Length = 201 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 7/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E + +V +V K A LR+ G +PA++Y + I++ + K ++S Sbjct: 2 ETRALSVNLREVKKNGAAKLRQQGMVPAVVYHKGEETVAISVDEIALDKLVHSAESHLID 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L GK V KD Q DPV+D +IHADF + + V + VP+ E ++ G+K Sbjct: 62 LQYPDGKS-VRAFIKDLQFDPVTDRVIHADFKRFTADEVVEMEVPIHV--EGEAVGVKIG 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKT-SSMSQLNIT 180 GGKL + H ++L N+P+ T+D++ L+ G S+H+ D++ +P T + + Sbjct: 119 GGKLQINMHTLTLKGKPANMPEHFTIDVSALETGHSLHISDLQATVPAGTIEIIGDADAA 178 Query: 181 IATIVAP 187 I ++ AP Sbjct: 179 IVSVAAP 185 >gi|317502723|ref|ZP_07960834.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] gi|315666167|gb|EFV05723.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] Length = 204 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM--SDPKPIA----LSAKDISKRLYS 57 KE ++ R +GK +++ LRK G IP +YG +D KP A ++ ++ K +Y+ Sbjct: 2 KEINVAGQKRTDLGKKASKELRKQGFIPCNLYGEKKNADGKPEAHAFTIAFSELRKIIYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I E I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 62 PHIY--VINLNIEGEHHTAILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLTG--L 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ Sbjct: 118 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF 167 >gi|322433960|ref|YP_004216172.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] gi|321161687|gb|ADW67392.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] Length = 232 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 4/153 (2%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKEL 73 K K AR +R G+IPA +YG D + + K ++K L+S++ TI L++ G L Sbjct: 17 KFNKNHARRVRVAGKIPATVYGAGIDAVAVTVDPKVVTKILHSESGHNTIFDLNVEGAPL 76 Query: 74 VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK-LNVVCH 132 + D+Q +P+ L+HADF +++ + V VPV G+K GG L+ + Sbjct: 77 AKAMIVDWQHEPIKGKLLHADFKRIAMDKAMRVSVPVLL--SGIPVGVKTGGGVLDQIMR 134 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 EV + C ++IPD I VD+ +L++ +IH+ D+ Sbjct: 135 EVEIECLPSDIPDHIDVDVANLELYGAIHISDL 167 >gi|329917506|ref|ZP_08276486.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] gi|327544536|gb|EGF30044.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] Length = 176 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 44 IALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 I+L + L + F ++IL L+I ++ V+ +D+Q+ +++HADF +V Sbjct: 3 ISLDHNALYHALKKETFHSSILDLEIDGKVEKVLLRDFQVHAYKQLVLHADFQRVDASQK 62 Query: 104 VTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + V VP+ FIN SP +K G ++ V E+ + C ++P+ +TVDL L+IG SIH+ Sbjct: 63 IHVKVPLHFINGEASPAVKMSAGIISHVVSELEVTCLPADLPEFLTVDLGALEIGSSIHL 122 Query: 163 EDIRLP 168 D+++P Sbjct: 123 ADLQMP 128 >gi|255034233|ref|YP_003084854.1| 50S ribosomal protein L25/general stress protein Ctc [Dyadobacter fermentans DSM 18053] gi|254946989|gb|ACT91689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dyadobacter fermentans DSM 18053] Length = 188 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 9/159 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K+ ++ R +GK A+ LR G +P+++YG + + A ++ R L++ + Sbjct: 2 KKHEIVGFKRANLGKVEAQNLRAQGYVPSVLYGG---DEQVHFYAPNMLFRELLFTPDIF 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +TL+I + I ++ Q PV+D LIHADFLQ+ G + V VP++ S G+ Sbjct: 59 N--VTLNIEGTEYNAILQETQYHPVNDALIHADFLQIIPGKEIKVEVPIKLT--GTSTGV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 +GGK+N ++ + A NIPD + VD+ +L +G S+ Sbjct: 115 MKGGKMNQKLRKLRVQGLAENIPDYVNVDVTELDLGKSV 153 >gi|2688715|gb|AAC67123.1| general stress protein (ctc) [Borrelia burgdorferi B31] Length = 214 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 39 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 97 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 98 DDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 155 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 156 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 196 >gi|297545174|ref|YP_003677476.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842949|gb|ADH61465.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 202 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 5/185 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 + + A+ RD +GK SAR L+K G IP I+YG +M++ P+A+ +RL ++ Sbjct: 2 QSVSIEAIKRD-IGKNSARRLKKQGYIPGILYGKDMTENIPLAVEYNKF-QRLLQQHGRN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + + + K+ Q D + +IH DF +VS + VP++F E Sbjct: 60 VLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKF--EGIGLIES 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 118 KGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIVV 177 Query: 183 TIVAP 187 +++AP Sbjct: 178 SVLAP 182 >gi|281423251|ref|ZP_06254164.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|299140506|ref|ZP_07033644.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] gi|281402587|gb|EFB33418.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|298577472|gb|EFI49340.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] Length = 204 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 93/170 (54%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM--SDPKPIA----LSAKDISKRLYS 57 KE +S R +GK +++ LRK G IP +YG +D +P A +S ++ K +Y+ Sbjct: 2 KEINVSGQKRTDLGKKASKELRKQGFIPCNLYGEKKDADGRPEAHAFTVSFCELRKIIYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I E I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 62 PHIY--VINLNIDGEHHTAILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLTG--L 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ Sbjct: 118 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF 167 >gi|251809807|ref|ZP_04824280.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|293366143|ref|ZP_06612830.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] gi|251806675|gb|EES59332.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|291319737|gb|EFE60096.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] Length = 223 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 8/190 (4%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYS 57 M+ + L +++R K + + LR +G++PA++YG + + + + K R Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVG 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +N ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E Sbjct: 61 RN---GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE-- 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 116 AVGAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNP 175 Query: 178 NITIATIVAP 187 +I T+V P Sbjct: 176 EDSIVTVVPP 185 >gi|288928358|ref|ZP_06422205.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] gi|288331192|gb|EFC69776.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] Length = 200 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 10/163 (6%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM--SDPKPIALS----AKDISKRLYS 57 +E ++ R +GK +++ +RK G IP +YG +D P ALS D+ K +Y+ Sbjct: 2 REINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGLPEALSFAVPMADLRKVVYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LDI + I K+ Q PV+D L+H DF +++E ++ + +PV + Sbjct: 62 PHIY--VVNLDIDGQKHTAIMKELQFHPVTDALLHVDFYEINEEKSIAIGIPVNLV--GL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + G++ GG+L++ ++ + P IP+ + +D+ L IG SI Sbjct: 118 AQGVRDGGRLSLSIRKLMVKAPYKQIPEKLDIDVTALTIGKSI 160 >gi|242241586|ref|ZP_04796031.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] gi|242234967|gb|EES37278.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] Length = 223 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 8/190 (4%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYS 57 M+ + L +++R K + + LR +G++PA++YG + + + + K R Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVG 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +N ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E Sbjct: 61 RN---GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE-- 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 116 AVGAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENDP 175 Query: 178 NITIATIVAP 187 +I T+V P Sbjct: 176 EDSIVTVVPP 185 >gi|70727509|ref|YP_254425.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus haemolyticus JCSC1435] gi|82581584|sp|Q4L3F8|RL25_STAHJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68448235|dbj|BAE05819.1| 50S ribosomal protein L25 [Staphylococcus haemolyticus JCSC1435] Length = 221 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K Sbjct: 59 GVIDLGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVHLVGE--AAGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + ++ + NIP+SI VD+ +L++ DS + DI++ + + ++ Sbjct: 117 EGGVVEQPLFDLQVTATPENIPESIEVDITELEVNDSYSVSDIKVSGDFTIENDPEESVV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|300871526|ref|YP_003786399.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] gi|300689227|gb|ADK31898.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] Length = 198 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A+ RD K L +G A +YG + IA+ K+ K ++S I+TL Sbjct: 7 IKALQRDTTKKSVGHKLINDGYALATLYGRGKE-YAIAVELKEFVK-IFSLAGQHDIITL 64 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 DI + V+ KDYQLD + + H DF ++ + VP+R E G++ GG Sbjct: 65 DIQNDQKREVLVKDYQLDGIKRTIRHIDFYEIDRNKKIKTFVPIRI--EGIPEGVRLGGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V +E+ + +IP ITVD+ +LK+G S+H+ DI+ PE + + + T+V Sbjct: 123 TLEQVEYELPIKAFPGSIPREITVDVTELKVGSSLHISDIKFPEGVDPVGDGSKAVVTVV 182 >gi|327399267|ref|YP_004340136.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] gi|327181896|gb|AEA34077.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] Length = 195 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 4/179 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A RD +G +A+ LR+ G+IPA+IYG + IA+ + + ++ L Sbjct: 3 ITAQKRD-IGTKAAKKLRREGKIPAVIYGADFGSEHIAVDRSEFMAAI-RRSRRNDRFEL 60 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E VI K+ Q PV + + H DF +++EG VTV VPVR + E+K G+K GG L Sbjct: 61 KLDNEEFKVIVKEIQWHPVKEEVEHVDFYKLTEGRPVTVDVPVRVVGESK--GVKMGGDL 118 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +++ IP+ I +D+ +L+IGD +H+ D+ +PE S N T+ I+ Sbjct: 119 YQPRKRITVEALPEAIPNEIEIDVTNLQIGDVVHVFDLDMPEGVRVKSSKNFTLVAILG 177 >gi|269796295|ref|YP_003315750.1| 50S ribosomal protein L25P [Sanguibacter keddieii DSM 10542] gi|269098480|gb|ACZ22916.1| LSU ribosomal protein L25P [Sanguibacter keddieii DSM 10542] Length = 206 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R + GKG+AR R+N QIPA++YG+ +DP +AL L N + Sbjct: 6 KLVAEARTEFGKGAARRTRRNNQIPAVLYGHGTDPVHVALPGHQTMLALKQSN---ALFE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + KD Q DPV +++ H D L V +G V V V V E G Sbjct: 63 IELDGTTQFALAKDVQRDPVKNVIEHVDLLIVKKGEKVEVEVNVHVTGEPVP------GT 116 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++V V L A N+P+ I D+ + G I D+ LPE ++ ++ + + I Sbjct: 117 IHIVQSQTVVLEALATNLPEWIEADVTGREAGTVITAGDLVLPEGSALITDADSDVVLIS 176 Query: 186 AP 187 P Sbjct: 177 VP 178 >gi|51599037|ref|YP_073225.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia garinii PBi] gi|71153124|sp|Q65ZY8|RL25_BORGA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51573608|gb|AAU07633.1| general stress protein [Borrelia garinii PBi] Length = 182 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNDVLHLKIKSNEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 66 DDGKLERCVFIKDVSENIASKLIYHIDFYEVDRRVELEKYVPIKLIG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 V+ +V + ++P+ I +DL + GDS+ ++D+ LP + + N+ + TI Sbjct: 124 TVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVRLAENDENLEVVTI 181 >gi|255023564|ref|ZP_05295550.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-208] gi|313611269|gb|EFR86036.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes FSL F2-208] Length = 207 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ LR G++P IIYG S+ P+++ + ++ K + N + ++ Sbjct: 5 LEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFSV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ +YQ+DP+ D+L+H D L V V V V + + +PG+K GG L Sbjct: 64 TVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 + H+V + +P++I +D++ L+IGD Sbjct: 122 QQIIHDVKVSATPEKLPETIELDISSLEIGD 152 >gi|194336703|ref|YP_002018497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] gi|226736345|sp|B4SAJ4|RL25_PELPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194309180|gb|ACF43880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] Length = 199 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 3/152 (1%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K +A LRKNG +P +IY + I+++ + K ++S L GK + Sbjct: 13 IKKKNAEKLRKNGIVPGVIYHKGEETIAISVNELALRKLVHSAESHIIDLQFPDGK-IKR 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 KD Q PV+D +IH DF S + + VPV E S G+++GGKL ++ H ++ Sbjct: 72 SFIKDVQFHPVTDRIIHTDFQLFSAEEIIELEVPVAVSGE--SAGVEKGGKLLIILHALT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + ++PD + VD+ L+IG SIH+++I L Sbjct: 130 IKGKPEDMPDHLVVDVTALEIGHSIHVKEIPL 161 >gi|313635141|gb|EFS01467.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL N1-067] gi|313639814|gb|EFS04543.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL S4-171] Length = 207 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ LR G++P IIYG S+ P+++ + ++ K + N + + Sbjct: 5 LEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFAV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ +YQ+DP+ D L+H D L V V V V + + +PG+K GG L Sbjct: 64 TVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + H+V + +P++I +D++ L+IGD + D LPE Sbjct: 122 QQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTND--LPE 161 >gi|28476663|gb|AAO44751.1| 50S ribosomal protein L25 [Tropheryma whipplei str. Twist] Length = 208 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R G+IPA+ YG P+ + L A +S + N +L L I Sbjct: 32 RVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQLKIDAR 88 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G +V + Sbjct: 89 ESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVTSVENY 143 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 144 SVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 195 >gi|111022660|ref|YP_705632.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus jostii RHA1] gi|122955279|sp|Q0S4R2|RL25_RHOSR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110822190|gb|ABG97474.1| 50S ribosomal protein L25 [Rhodococcus jostii RHA1] Length = 207 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + ++D + L + I Sbjct: 4 ENRLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSRDFAAILRAHG-TNAI 62 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 LTLDI GKE V + K + P+ + + HAD L + +G VTV VPV E + Sbjct: 63 LTLDIEGKEQV-ALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAAA----- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + +SL A +IP+ I V + L++G I + LP+ ++ + + I Sbjct: 117 GTLVAQDAATISLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGSTLQADEELLIVN 176 Query: 184 IVA 186 +VA Sbjct: 177 VVA 179 >gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium adolescentis ATCC 15703] gi|118765344|dbj|BAF39523.1| 50S ribosomal protein L25 [Bifidobacterium adolescentis ATCC 15703] Length = 204 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR +R IPA +Y DP + L K+ + L N + T+ Sbjct: 9 LEGAARTEFGKGAARRMRVANLIPATVYAGGEDPTFVQLPMKETTLALRHTN---ALFTI 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 66 KYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 119 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 120 AFVDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPE 162 >gi|225873665|ref|YP_002755124.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] gi|225791486|gb|ACO31576.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] Length = 220 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 8/184 (4%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +SA R+ K K +AR +R G+IPA++YG P+ I L K I++ L+S+ +I Sbjct: 7 VSATPREGKFNKNAARRVRVRGRIPAVVYGAAEPPQAIELDPKQITRILHSETGHNSIFD 66 Query: 67 LDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIK- 122 L+IG K + D+Q +P+ LIH D +++ + V VPV+ +P G+K Sbjct: 67 LEIGGVKTQTKAMIVDWQYEPIKGNLIHIDLKRIALDKPIRVSVPVQLTG---TPVGVKT 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QGG L+ V EV + C N+IP I VD+ +L G + + D+ +K +S + T+A Sbjct: 124 QGGILDQVLREVEVECLPNDIPSHIDVDITELAFGTILRVADLPHGDKLKYISDESNTVA 183 Query: 183 TIVA 186 IV+ Sbjct: 184 HIVS 187 >gi|326383812|ref|ZP_08205497.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] gi|326197576|gb|EGD54765.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] Length = 202 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 8/163 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R++ GKGSAR R GQ+PA++YG+ +DPK + L ++++ L + N + ++ Sbjct: 6 QLATTAREEKGKGSARRARAAGQVPAVLYGHGTDPKHLLLPNRELAAILRA-NGVNAVVE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + + H D L V G V V V + G+ G Sbjct: 65 LDIAGDKQLALTKQVDVHPIRNYIEHVDLLIVKRGEKVNVEVGIVI------EGVAASGT 118 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 L + V + A +IP++I VD+++L G +I D+ LP Sbjct: 119 LTIQDASVVEVEAEALHIPENIVVDVHNLAAGTNITAADLLLP 161 >gi|307324318|ref|ZP_07603526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] gi|306890049|gb|EFN21027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] Length = 199 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR R ++P ++YG+ DP + L A D+ L + N + + Sbjct: 3 EVKISAKPRTEFGKGAARRTRAANRVPGVVYGHGVDPLHVTLPAHDLLMALKTPNVLLRV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ GK+ + VIPK Q P+ +L H D L V +G VTV VP+ + +PG Sbjct: 63 -KVEGGKDEL-VIPKAVQRHPIKIGVLEHVDLLLVKKGEKVTVEVPI-LTEGDLAPG--- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L + + + + A +IP+S+TV + L G +IH +DI LP T+ + + + Sbjct: 117 GNLLEHLLNALPVETEATHIPESVTVSIAGLDAGATIHAKDITLPAGTTLAVEEDAAVLQ 176 Query: 184 IV 185 +V Sbjct: 177 VV 178 >gi|255971277|ref|ZP_05421863.1| ribosomal protein L25 [Enterococcus faecalis T1] gi|255962295|gb|EET94771.1| ribosomal protein L25 [Enterococcus faecalis T1] Length = 202 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 7/147 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGKELVHVIPKDYQ 82 LR G++PAI+YG + PI KD+SK L T I +T+D GK + ++ K Q Sbjct: 21 LRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGVNTVIKMTVD-GKNINTLMSK-AQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 LD + ++H +FL V+ T V V+ I E S G+K GG L + V + + Sbjct: 79 LDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAGGTLAQNLYTVLVAATPDK 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +P+SI VD+ +L+IGD++ + LPE Sbjct: 137 LPESIEVDITNLEIGDALTI--AHLPE 161 >gi|224475643|ref|YP_002633249.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus carnosus subsp. carnosus TM300] gi|254801062|sp|B9DLD8|RL25_STACT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222420250|emb|CAL27064.1| 50S ribosomal protein L25 [Staphylococcus carnosus subsp. carnosus TM300] Length = 214 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 19/175 (10%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI--------LTLDIGKELVH 75 +R +G++PA++YG K++S ++ F+ I + L +G + + Sbjct: 21 IRNSGKVPAVMYG---------YGQKNVSVKVDEVEFIKVIREVGRNGVIDLGVGSKTIK 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG ++ + Sbjct: 72 VMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEGGVVDQPLFNLE 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 + NIP+ + V+++ L+IGDS+ + D+ + ++ T+ T+V P G Sbjct: 130 VTATPENIPEYLEVEISGLEIGDSLSVADLNTTGDFTIENEPEATVVTVVPPTQG 184 >gi|300774725|ref|ZP_07084588.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] gi|300506540|gb|EFK37675.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] Length = 214 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 13/185 (7%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK S + LR +P ++YG + P+ SA++ + + +Y+ Sbjct: 2 KSITIQGTKRESVGKKSTKALRDAELVPCVVYGGGA---PLNFSAEEKAFKGLVYTPEAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + +D GK + V+ +D Q P++D ++HADF Q+S+ V + VPVR +K G+ Sbjct: 59 TVSIEVD-GKTIPAVL-QDIQFHPITDKILHADFYQLSDDKPVIMEVPVRITGRSK--GV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG L ++ + N+PD I VD+ L+IG+ +++ I KT S ++ Sbjct: 115 VAGGVLRQSFRKLKVKAIPANLPDEIVVDVTPLRIGNKLYIGGI----KTEGYSFMHPDN 170 Query: 182 ATIVA 186 A +VA Sbjct: 171 AVVVA 175 >gi|115438116|ref|NP_001043461.1| Os01g0593500 [Oryza sativa Japonica Group] gi|113532992|dbj|BAF05375.1| Os01g0593500 [Oryza sativa Japonica Group] gi|125571028|gb|EAZ12543.1| hypothetical protein OsJ_02444 [Oryza sativa Japonica Group] Length = 271 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + +++ +K I K L F+ Sbjct: 68 AVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFFL 127 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 128 SRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLMF 187 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 I E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 188 IGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 242 >gi|125526661|gb|EAY74775.1| hypothetical protein OsI_02667 [Oryza sativa Indica Group] Length = 271 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + +++ +K I K L F+ Sbjct: 68 AVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFFL 127 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 128 SRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLMF 187 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 I E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 188 IGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 242 >gi|312880020|ref|ZP_07739820.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] gi|310783311|gb|EFQ23709.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] Length = 217 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 Q K+ R++ G G R LR G IPA++YG + K + K++ + S ++ Sbjct: 2 QDRAKVVFRSREETGTGVCRKLRVEGLIPAVLYGPAFPEGKKGVVGYKEVLPVVSSSHWE 61 Query: 62 TTILTLDIG---KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 TTIL LD+G +E+ + ++ Q ++ +H DFLQ+ + + V VPV N + Sbjct: 62 TTILELDLGDGRQEMA--LMREIQRHALTRSPLHIDFLQLVKDHKIRVKVPVHLDNRDTC 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG L +E+ + +IP+ I +++ L + I + D+ LP+ + + + Sbjct: 120 AGVKLGGLLEQFLYELEVEVLPQDIPEQIRLNVQGLGMNKEIKVSDVPLPQGATWVQDPD 179 Query: 179 ITIATIVAP 187 + ++V P Sbjct: 180 SVVVSLVPP 188 >gi|255537627|ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 252 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 16/176 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKN 59 + A+ R GK A RK G++P+I++ + + + I++ A I +L Sbjct: 48 IEAIPRATSGKSIAVKERKAGRVPSIVFEQENGQHGGNKRLISVQANQIRNMINKLGRSF 107 Query: 60 FMTTILTLDIGKEL--------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++ E V V+P+ L +SD I+ F++ + + V VP+ Sbjct: 108 FLSKLFNLEVRPEFGSDEIIEKVRVLPRLVHLHAISDTPINVTFIRAPSDAWLKVDVPLV 167 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + E+ SPG+++G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 168 YRGEDVSPGLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKV 223 >gi|172040259|ref|YP_001799973.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium urealyticum DSM 7109] gi|226736300|sp|B1VFK0|RL25_CORU7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171851563|emb|CAQ04539.1| 50S ribosomal protein L25 [Corynebacterium urealyticum DSM 7109] Length = 212 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ V+R + GKG++R LR++G+IP ++YGN DP + + D+ L + + Sbjct: 5 TRIEGVLRTEFGKGASRRLRRDGRIPLVVYGNELDPVHVHVDTLDLHA-LVRNEGVNAVF 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN-KSPGIKQG 124 L+I E V+ K + ++ + HAD L V G V V VPV I+E +PG Sbjct: 64 ELNIDGEDNLVMVKAIDQNVLTLDIDHADLLNVKRGERVEVEVPV--IHEGLPAPGAMVV 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++V+ EV +L +IP+ I +D+N L+IG+ I +D+++P +S + I Sbjct: 122 QDVDVLLLEVDVL----DIPEEIVLDINGLEIGEQILAKDVKMPSNAVLVSDAEELVINI 177 Query: 185 V 185 V Sbjct: 178 V 178 >gi|296329554|ref|ZP_06872040.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672751|ref|YP_003864422.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] gi|296153297|gb|EFG94160.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410994|gb|ADM36112.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] Length = 205 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + T++ Sbjct: 2 ATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNTVI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TLD+ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 61 TLDVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + +++ IP +I D+++L + + + + D+ S + + +A+I+ Sbjct: 119 VLQQPLYALTVKAKPKAIPQTIEADISNLDVNEVLTIADLPAGGDYSFNHESDEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|203284680|ref|YP_002222420.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|203288213|ref|YP_002223228.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] gi|226736283|sp|B5RMX8|RL25_BORDL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736286|sp|B5RQC3|RL25_BORRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|201084123|gb|ACH93714.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|201085433|gb|ACH95007.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] Length = 182 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 3/157 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R K G AR+LR +IPA++YG SD I +++ + K+ ++K T+L L+ G Sbjct: 12 RSKFGSSCARILRAKSEIPAVVYGKESDVLHIKINSNEFDKK-FAKFTDNTVLLLNDGMV 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V KD + + H DF +V + + ++FI S G+K+GG L+V+ + Sbjct: 71 EKCVFIKDVSENLTKKFIYHIDFYEVDRTREIERDISIKFIGA--SVGVKEGGTLSVLRN 128 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V + N+P+ + VDL +K GD I ++DI L + Sbjct: 129 TVKVKALPLNLPEFVEVDLTPVKKGDQITLKDIVLSD 165 >gi|313680824|ref|YP_004058563.1| LSU ribosomal protein l25p [Oceanithermus profundus DSM 14977] gi|313153539|gb|ADR37390.1| LSU ribosomal protein L25P [Oceanithermus profundus DSM 14977] Length = 212 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 10/185 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTT 63 E KL A R+ ++LR+ G++P I+Y N++ + L D +++ + Sbjct: 2 EYKLKAYYRES---EKPKVLRREGKLPGIMYNKNVNKKLYVHLGEFD---KVFRNAGVHH 55 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL++ E V + + QLD H DF +++G T+ ++V ++F+ E K G+K Sbjct: 56 VITLELPDGETVDTVVRQVQLDKRRRRPEHVDFYVLTKGQTLDMYVNLKFVGEAK--GVK 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L+ ++ + NIP I VD+++L+IGD +H D+ LPE ++ +A Sbjct: 114 LGGVLSTPLTDLEVRVLPRNIPGFIEVDVSELEIGDVLHASDLALPEGVELLTDPEAVVA 173 Query: 183 TIVAP 187 T+V P Sbjct: 174 TVVPP 178 >gi|323700583|ref|ZP_08112495.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. ND132] gi|323460515|gb|EGB16380.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans ND132] Length = 206 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 5/183 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS-KNFMTTIL 65 KL+ R ++GKG R LR +G +P I Y P+ + + K + N L Sbjct: 6 KLNVQERSEMGKGPNRRLRASGMVPGIYYDAKGANIPVKVQMVPLQKTYAAVGNSQVFEL 65 Query: 66 TLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L+ G E + + + +PV + H DF V + V VP + +K G+K Sbjct: 66 VLERGGKTETMPALLWRVRNEPVKGVPEHVDFFGVDLTKEIKVAVPFEIVGNSK--GVKL 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + ++C +IP++I +D+ DL + D +H+ED+ PE + + + N I + Sbjct: 124 GGVMEQYREHIEVICKPMDIPEAIVIDITDLDVMDHVHIEDVTFPEGVTPVFEENFAILS 183 Query: 184 IVA 186 I A Sbjct: 184 IAA 186 >gi|54026868|ref|YP_121110.1| 50S ribosomal protein L25/general stress protein Ctc [Nocardia farcinica IFM 10152] gi|68053081|sp|Q5YPZ5|RL25_NOCFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54018376|dbj|BAD59746.1| putative ribosomal protein L25 [Nocardia farcinica IFM 10152] Length = 200 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 12/165 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R + GKG+AR R+ G +PA++YG+ S+P+ ++L+A+ + + ++ +L L Sbjct: 7 LEASVRTEFGKGAARRTRRAGNVPAVLYGHQSEPQHLSLNAQAFAA-ILREHGTNAVLNL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + + K + P+ + HAD L V G VT V V + + +PG Sbjct: 66 DIEGKKQLALTKSVVVHPIRRYIEHADLLIVKRGEKVTADVAVT-VTGDAAPG------- 117 Query: 128 NVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 +V E +S+ A N+P++I V + D +IG I I LP+ Sbjct: 118 TLVTQEATTISIEAEALNLPEAIEVSVEDAEIGTQITAGSIALPQ 162 >gi|329723963|gb|EGG60488.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU144] Length = 219 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + + + NIP++I VD+++L++ DS+ + DI++ + + +I Sbjct: 117 EGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|57866045|ref|YP_187735.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis RP62A] gi|282875431|ref|ZP_06284303.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|68053030|sp|Q5HRQ4|RL25_STAEQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57636703|gb|AAW53491.1| ribosomal protein L25 [Staphylococcus epidermidis RP62A] gi|281295788|gb|EFA88310.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|329733030|gb|EGG69369.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU028] gi|329737904|gb|EGG74132.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU045] Length = 219 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + + + NIP++I VD+++L++ DS+ + DI++ + + +I Sbjct: 117 EGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|281420709|ref|ZP_06251708.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] gi|281405482|gb|EFB36162.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] Length = 201 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM--SDPKPIALSAK----DISKRLYS 57 KE ++ R +GK +++ LRK G IP +YG + P ALS ++ K +Y+ Sbjct: 2 KEINVTGQKRTDLGKKASKTLRKEGLIPCNLYGEKKGENGAPEALSFAVPFAELRKIIYT 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ Sbjct: 62 PHVY--VINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLTG--L 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G++ GG++N+ ++++ P IP+ + +D+ +LKIG SI + D+ Sbjct: 118 AQGVRDGGRMNLSIRKINVTAPYQVIPEHLDIDVTELKIGKSIKVGDLSF 167 >gi|149280711|ref|ZP_01886821.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] gi|149228535|gb|EDM33944.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] Length = 192 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 85/162 (52%), Gaps = 5/162 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R+ VGK A+ LR G++PA++YG + A+ ++ +YS Sbjct: 2 KTVAISGSTRENVGKRDAKELRYEGKVPAVLYGG-KEQAHFAVVTTELKDAIYSPEASFV 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +TL+ K + I K+ Q P++D L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 61 EITLNGTK--TNAIIKELQFHPLTDQLLHVDFLQLFDDKEILMEIPVKLT--GTSPGVKM 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 GGKL ++ + ++P ++ V + L++G+ + D+ Sbjct: 117 GGKLVQKLRKLRVRSFPKDMPQAVEVSIAKLEVGNLFRVRDL 158 >gi|161486568|ref|NP_787782.2| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei str. Twist] Length = 186 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R G+IPA+ YG P+ + L A +S + N +L L I Sbjct: 10 RVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQLKIDAR 66 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G +V + Sbjct: 67 ESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVTSVENY 121 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 122 SVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 173 >gi|146298888|ref|YP_001193479.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium johnsoniae UW101] gi|189042357|sp|A5FKV4|RL25_FLAJO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146153306|gb|ABQ04160.1| LSU ribosomal protein L25P [Flavobacterium johnsoniae UW101] Length = 203 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ VGK S + LR G +P ++YG + + A +Y+ N T ++ L GK Sbjct: 11 RESVGKVSTKALRNAGAVPCVLYGG-NQAVHFSADAAAFKNLVYTPNAHTVVIELGKGKS 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + I +D Q+ PV+D ++H DF Q+ + +T+ VPV+ + +K G+ GG L + Sbjct: 70 F-NAILQDIQVHPVTDKILHIDFFQLFDDKEITMEVPVKIVGTSK--GVLAGGVLRLNQR 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ + N+PD + D+ L++G+ +++ + PE Sbjct: 127 KLKVKALPANLPDFVEADITPLEMGNKLYVTKVGKPE 163 >gi|15639363|ref|NP_218812.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum str. Nichols] gi|189025605|ref|YP_001933377.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum SS14] gi|68052994|sp|O83387|RL25_TREPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694581|sp|B2S2W9|RL25_TREPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3322650|gb|AAC65357.1| general stress protein (ctc) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018180|gb|ACD70798.1| general stress protein [Treponema pallidum subsp. pallidum SS14] gi|291059763|gb|ADD72498.1| ribosomal protein L25, Ctc-form [Treponema pallidum subsp. pallidum str. Chicago] Length = 196 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD++ +L R ++GK +A RK G++PA++Y + P+ L+ +D RL+ Sbjct: 1 MDER--RLKGKRRVQLGKYAAVRGRKEGRLPAVMYDHRGVSVPLELAQQDFD-RLFRALT 57 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+L+L++ G E+ V KDYQ + VSD + H DF V E +V + + +R Sbjct: 58 RSTVLSLELDGGEVFCVFVKDYQHNMVSDRVEHVDFYAVEE--SVPLRMRIRLQLCGSPE 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ G +L + + N+PD + +D++ L GD + D+ LP +S + Sbjct: 116 GVRYGARLEKGLSYIEVESLPRNLPDRVVLDISGLGAGDVRRVRDVPLPASVVVLSDPDA 175 Query: 180 TIATIVAPIS 189 I + + S Sbjct: 176 VIVALSSSAS 185 >gi|294790835|ref|ZP_06755993.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] gi|294458732|gb|EFG27085.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] Length = 201 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R++ GKG+AR +R G IPA IY ++P + L K+ + + N ++ + Sbjct: 6 LEGEARNEFGKGAARRMRLAGFIPATIYEGGNEPAFVKLPQKEATLAMRHAN---ALIEI 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GKE + ++ Q +PV + H DF +V G V V VPV FI G +G + Sbjct: 63 KYGKESKLAVAREIQRNPVKRTIEHIDFYEVHAGEKVEVEVPV-FIE-----GDPKGAAV 116 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V +++ +N+P++IT+ + L GD + +D++LPE Sbjct: 117 AFVDVQNLTVRADVSNLPENITISVEGLVEGDHVFAKDVKLPE 159 >gi|68053203|sp|Q83FQ8|RL25_TROWT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 187 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R G+IPA+ YG P+ + L A +S + N +L L I Sbjct: 11 RVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQLKIDAR 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G +V + Sbjct: 68 ESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVTSVENY 122 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 123 SVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 174 >gi|152990133|ref|YP_001355855.1| 50S ribosomal protein L25/general stress protein Ctc [Nitratiruptor sp. SB155-2] gi|166223697|sp|A6Q1Y9|RL25_NITSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151421994|dbj|BAF69498.1| 50S ribosomal protein L25 [Nitratiruptor sp. SB155-2] Length = 178 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ GK + + LR++G + A IYG A D + + K + + Sbjct: 2 LEGIVRESTGKKATKALRRDGYLIANIYGKDFPNIHAAFKKGDFIRTVRHKEKLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G + + V+ ++YQ DPV+ L+H D + G VP++ + +P G+K G Sbjct: 60 KVGDKELEVVVQEYQKDPVTYDLLHVDLMVAQPGVVTYYMVPIKTVG---TPIGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 L + + NIPDSIT+D+++L +GD+I + DI LPE M+ Sbjct: 117 LVTSKRRIKVKGAIENIPDSITLDVSNLDVGDAILIRDIELPEGVEHMT 165 >gi|289433566|ref|YP_003463438.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169810|emb|CBH26348.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 207 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ LR G++P IIYG S+ P+++ + ++ K + N + + Sbjct: 5 LEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRD-NGRNAVFAV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ +YQ+DP+ D L+H D L V V V V + +PG+K GG L Sbjct: 64 TVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLVG--NAPGVKAGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + H+V + +P++I +D++ L+IGD + D LPE Sbjct: 122 QQIIHDVKVSATPEKLPETIELDVSSLEIGDVLTTND--LPE 161 >gi|27469200|ref|NP_765837.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis ATCC 12228] gi|71153665|sp|Q8CQU8|RL25_STAES RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27316749|gb|AAO05924.1|AE016751_219 50S ribosomal protein L25 [Staphylococcus epidermidis ATCC 12228] Length = 219 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + + + NIP++I VD+++L++ DS+ + DI++ + + +I Sbjct: 117 EGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|154487414|ref|ZP_02028821.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] gi|154083932|gb|EDN82977.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] Length = 202 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR +R IPA +Y DP + L K+ + L N + T+ Sbjct: 7 LEGAARTEFGKGAARRMRVANLIPATVYAGGEDPVFVQLPMKETTLSLRHTN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPE 160 >gi|28572818|ref|NP_789598.1| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei TW08/27] gi|71153673|sp|Q83HD6|RL25_TROW8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28410951|emb|CAD67336.1| 50s ribosomal protein L25 [Tropheryma whipplei TW08/27] Length = 187 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R G+IPA+ YG P+ + L A +S + N +L L I Sbjct: 11 RVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQLKIDAR 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G +V + Sbjct: 68 ESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVTSVENY 122 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 123 SVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 174 >gi|239637487|ref|ZP_04678461.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] gi|239596932|gb|EEQ79455.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] Length = 220 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 7/181 (3%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILT 66 S + + K + + LR G++PA++YG + + + + K R +N ++ Sbjct: 6 SIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN---GVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+V Sbjct: 121 VEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVSDIKVSGDFTIENEPEDSIVTVVP 180 Query: 187 P 187 P Sbjct: 181 P 181 >gi|296125818|ref|YP_003633070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] gi|296017634|gb|ADG70871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] Length = 196 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A+ RD K R LR G A +YG + IA+ K+ K ++S I+TL Sbjct: 7 IKALQRDTKFKSVGRKLRNEGYALATLYGR-ENQYSIAVELKEFVK-VFSLAGQHDIITL 64 Query: 68 DIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 DI + V+ KDYQ+D + + H DF ++ + +VP+ E G++ GG Sbjct: 65 DIENDKAREVLVKDYQIDGIKRSIRHIDFYEIDRNKKIKTYVPIHI--EGIPEGVRLGGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + + + +IP + VD+++LK+GDS+H+ DI+ PE + + + T+V Sbjct: 123 TLEQVEYGLPIKAFPGSIPRELIVDVSELKVGDSLHISDIKFPEGVDPVGDGSKAVVTVV 182 >gi|330686084|gb|EGG97706.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU121] Length = 220 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 7/181 (3%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILT 66 S + + K + + LR G++PA++YG + + + + K R +N ++ Sbjct: 6 SIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN---GVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+V Sbjct: 121 VEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVADIKVSGDFTIENEPEDSIVTVVP 180 Query: 187 P 187 P Sbjct: 181 P 181 >gi|226365173|ref|YP_002782956.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus opacus B4] gi|254801058|sp|C1AY16|RL25_RHOOB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226243663|dbj|BAH54011.1| 50S ribosomal protein L25 [Rhodococcus opacus B4] Length = 208 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + +++ + L + + Sbjct: 4 ENRLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSREFAAILRAHG-TNAV 62 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 LTLDI GKE V + K + P+ + + HAD L + +G VTV VPV E S Sbjct: 63 LTLDIDGKEQV-ALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAAS----- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + VSL A +IP+ I V + L++G I + LP+ + + + I Sbjct: 117 GTLVAQDAATVSLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGATLQADEELLIVN 176 Query: 184 IVA 186 +VA Sbjct: 177 VVA 179 >gi|262341258|ref|YP_003284113.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272595|gb|ACY40503.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 211 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 85/153 (55%), Gaps = 3/153 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 + VGK + R +R +G+IP I+YG + P S + + K +Y+ I+ ++ + Sbjct: 10 KRNVGKKAVRSIRLSGKIPCILYGKNIN-IPFLTSLESLKKIVYTTEVYGVIVQIEGYNK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 ++ + K+ Q DP+SD ++H DF Q+ E + + +PV I + G+ +GG+ Sbjct: 69 NINAVQKEIQFDPISDKILHVDFFQIDESKPLVLEIPV--IPFGRPIGVSKGGEYYSPIR 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++ + +NIP+ I ++++ L IGD I +ED+ Sbjct: 127 KLKIKAFPSNIPEYIKLNISSLDIGDRITVEDL 159 >gi|224438056|ref|ZP_03658995.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter cinaedi CCUG 18818] gi|313144501|ref|ZP_07806694.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] gi|313129532|gb|EFR47149.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] Length = 178 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG + A D K + K+ T I + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQENIHCAFKLNDFIKAVKHKS--TLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + + V+ ++YQ DPV++ +IH D L +G VPV + + G+K G L Sbjct: 60 KVDGKTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSV--KGSAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C A +P++ +D++DL +GDSI + D+ + S +++ ++ + ++ Sbjct: 118 FISTKRISVKCTAEKLPNTYELDVSDLDVGDSILIRDLPQLDGVSVLNRPSVAVVGVI 175 >gi|295132327|ref|YP_003583003.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] gi|294980342|gb|ADF50807.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] Length = 213 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 7/161 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK + + LR GQ+P ++YG D +P+ + ++IS + +Y+ + Sbjct: 2 KSITIKGSKRESVGKKATKALRNAGQVPCVLYG--GDAEPLHFTTEEISFQHLVYTPDVH 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L G E + I +D Q PV+D ++H DF ++ + +T+ +P+ + + G+ Sbjct: 60 TVVIELKSG-EKYNAILQDIQFHPVTDNILHVDFYEIFDNKPITMEIPIHTVGVAR--GV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 K GG L + + +PD I D+ LKIG +++ Sbjct: 117 KNGGVLRYNLRRLKVRGLPGVLPDYIEADVTKLKIGQKLYV 157 >gi|225012236|ref|ZP_03702673.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] gi|225003791|gb|EEG41764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] Length = 216 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 10/171 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK--DISKRLYSKNFM 61 K ++ R+ VGK + + LR G++P ++YG +P+ SA D SK +Y+ N Sbjct: 2 KSITINGSKRESVGKVATKALRNAGRVPCVLYGGG---EPLHFSAPELDFSKLVYTPNAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ LD E V I +D Q P++D ++H DF ++ + V++++PV+ E +PG+ Sbjct: 59 TVVINLD--GENVAAILQDIQFHPLTDKILHIDFYRLFDDKEVSMNIPVKV--EGAAPGV 114 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 GG L + ++ + ++PD I +++ LK+G+ ++ +++ E T Sbjct: 115 LNSGGVLVLNKRKLRVKALPKDLPDFIVANISKLKLGNKLYTAELQTEEYT 165 >gi|307151053|ref|YP_003886437.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] gi|306981281|gb|ADN13162.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] Length = 191 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 13/175 (7%) Query: 24 LRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELVHV 76 LR+ G IPA +YG+ ++ + + KD L + T++ ++I GK L+ Sbjct: 19 LRRQGLIPAALYGHKGTESISLTVKEKDAQVLLKKASVNNTLVDVNIPDVPWSGKALI-- 76 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 ++ Q+ P + H F V+ + V VP+ + E + G+KQGG + V +++ Sbjct: 77 --REVQIHPWKRSVYHLSFFSVAAHGKIEVVVPLHLVGE--AAGVKQGGLIEQVISSIAV 132 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISGS 191 C +IP++I +DL L IGDS+ + D++LPE + + + I +++AP G Sbjct: 133 DCLPESIPEAIDIDLGPLGIGDSVSIGDLKLPEGVTCLDDPSQLILSVIAPRKGG 187 >gi|119357476|ref|YP_912120.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides DSM 266] gi|166223674|sp|A1BH19|RL25_CHLPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119354825|gb|ABL65696.1| LSU ribosomal protein L25P [Chlorobium phaeobacteroides DSM 266] Length = 198 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 5/174 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K A LRK G +PA+IY + ++++ + K ++S L GK + Sbjct: 13 IRKKEAAKLRKTGIVPAVIYHKGEETISVSVNEIALKKLVHSAESHIIDLKFPDGKTVRS 72 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 I KD Q DPV+D +IH DF S V + VPV + G+++GG++ ++ H ++ Sbjct: 73 FI-KDVQFDPVTDRIIHTDFQLFSADELVEMDVPVG--TTGDAVGVEKGGRIQIIKHALT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIATIVAP 187 L ++PD +D +L+IG SIH+ +I + + + M + + TIVAP Sbjct: 130 LKGMPADMPDHFLIDCTNLEIGHSIHVREIPMDARPGLTIMDDPDTPVVTIVAP 183 >gi|288574798|ref|ZP_06393155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570539|gb|EFC92096.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 207 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 4/169 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+ RD VGK + LR++G IPA++YG + + + + A+D + ++ T Sbjct: 5 RLNLEKRDAVGKEACGRLRRSGYIPAVLYGPDYREAVSVQVKAEDFLPNIRGTHWNTLKF 64 Query: 66 --TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L G + +I +D + VSD ++H DF Q+ +G V+V VP+ + + G+K Sbjct: 65 DAVLPDGSSEMCII-RDMNRNYVSDDVLHVDFYQLVKGHKVSVKVPIEIVGKETCAGVKA 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 GG L ++ + IP+++ +++ + +GDSI + D+ LPE Sbjct: 124 GGLLEQRILDIEINVLPREIPENVVLNVESMNVGDSITLADLDLPESAE 172 >gi|304405246|ref|ZP_07386906.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] gi|304346125|gb|EFM11959.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] Length = 227 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 6/182 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+ R K R LR G++P +IYG+ ++ P IAL+ +D+ L + +L Sbjct: 5 LTVEARATRTKRELRELRGQGKVPGVIYGSGLAGPTLIALAERDLLPLL--RTHPNAVLD 62 Query: 67 LDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + L V+ + Q DP+S ++H D Q++ + HV R S G+++GG Sbjct: 63 VAVPGGLKEPVVISEVQRDPLSHQVVHIDLHQINMNEKLKTHV--RLEVTGDSTGVREGG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L ++ HE+ + C N +P+ I +++ L +G+++ + D+ LP + S + + TI+ Sbjct: 121 ILTLMLHELEIECLPNQLPEVIEINVASLGVGENLLVSDLTLPAGVTVRSDADQVVVTIL 180 Query: 186 AP 187 AP Sbjct: 181 AP 182 >gi|255536668|ref|YP_003097039.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacteriaceae bacterium 3519-10] gi|255342864|gb|ACU08977.1| LSU ribosomal protein L25p [Flavobacteriaceae bacterium 3519-10] Length = 211 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K + R+ VGK S + LR +P ++YG + + SA++ S + +Y+ Sbjct: 2 KSITIQGTKRENVGKKSTKALRDAELVPCVVYGGA---ETLNFSAEERSFKGLVYTPEAH 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T +++++ + + +D Q P++D ++HADF Q+ E V + VPVR +K G+ Sbjct: 59 T--VSIEVDGNTIPAVLQDIQFHPLTDKILHADFYQLDENKPVVMEVPVRLTGRSK--GV 114 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 GG + ++ L N+PD I VD+ LKIG +++ DI Sbjct: 115 VAGGAMRQSFRKLKLKALPANLPDEIVVDVTPLKIGSKLYVGDI 158 >gi|78187201|ref|YP_375244.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium luteolum DSM 273] gi|109893376|sp|Q3B380|RL25_PELLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78167103|gb|ABB24201.1| LSU ribosomal protein L25P [Chlorobium luteolum DSM 273] Length = 202 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 3/151 (1%) Query: 15 KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELV 74 ++ K +A LRK G++PA++Y ++++ ++K ++S L G Sbjct: 12 EIKKNAAGKLRKTGEVPAVVYHKGEATIAVSVNEIALNKLVHSAESHIIDLKFPDGNVKR 71 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 I KD Q DPV+D +IH DF VS + + VPV E + G+++GGKL ++ H + Sbjct: 72 SFI-KDVQFDPVTDRVIHTDFQLVSANEVIEMDVPVAV--EGDAIGVEKGGKLQIIRHSL 128 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++ ++P +T+D+ L+IG SIH+ +I Sbjct: 129 TVKGKPGDMPAHVTIDVTALEIGHSIHVREI 159 >gi|319399658|gb|EFV87912.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis FRI909] Length = 219 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMT 62 L +++R K + + LR +G++PA++YG + + + + K R +N Sbjct: 2 ASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRN--- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K Sbjct: 59 GVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + + + NIP++I VD+++L++ DS+ + D+++ + + +I Sbjct: 117 EGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDVKISGDFTIENDPEDSIV 176 Query: 183 TIVAP 187 T+V P Sbjct: 177 TVVPP 181 >gi|289578962|ref|YP_003477589.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] gi|289528675|gb|ADD03027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] Length = 202 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 5/185 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 + + A+ RD GK +AR L+K G IP I+YG +M++ P+A+ +RL ++ Sbjct: 2 QSVSIEAIKRD-TGKNAARRLKKQGYIPGILYGKDMTENIPLAVEYNKF-QRLLQQHGRN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + + + K+ Q D + +IH DF +VS + VP++F E Sbjct: 60 VLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKF--EGIGLIES 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 118 KGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIVV 177 Query: 183 TIVAP 187 +++AP Sbjct: 178 SVLAP 182 >gi|111115620|ref|YP_710238.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia afzelii PKo] gi|122956313|sp|Q0SM66|RL25_BORAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110890894|gb|ABH02062.1| general stress protein [Borrelia afzelii PKo] Length = 182 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + + ++P++ + S G+K+GG L Sbjct: 66 DDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLVG--ASIGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|225351971|ref|ZP_03742994.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157218|gb|EEG70557.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 198 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR +R IPA +Y +P + L K+ + L N + T+ Sbjct: 7 LEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPE 160 >gi|254416190|ref|ZP_05029945.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] gi|196177123|gb|EDX72132.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] Length = 210 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 14/168 (8%) Query: 15 KVGKGSA-RLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDI--- 69 K +GS + LR+ G IPA +YG+ ++ + + AK L + T + ++I Sbjct: 9 KRAEGSKPKALRREGLIPATLYGHKGAESVALTVEAKAAETLLKQADINHTAVQVNIPDL 68 Query: 70 ---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 GK L+ ++ Q P IL H F V+ T+ + +PV + + G+KQGG Sbjct: 69 SWNGKALL----REVQTHPWKPILYHLSFFSVASQDTIQISLPVNLVG--TAFGVKQGGI 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 L V E+ + C ++IP++I VD+++L IG S+H+ +I LP ++M Sbjct: 123 LEHVMTELQVECAPDSIPEAIEVDISNLDIGASLHVHEILLPSGATAM 170 >gi|184201366|ref|YP_001855573.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] gi|226736333|sp|B2GLJ3|RL25_KOCRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|183581596|dbj|BAG30067.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] Length = 211 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 8/182 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + GKG AR +R N +IPA+IYG+ ++P + L ++ L S+N +L + Sbjct: 7 IPATLRTEFGKGYARRVRANDKIPAVIYGHGAEPLHVILPGHEMM--LASRNS-NAVLDI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E + K+ Q V ++H D L V G V V +PV E +P + Sbjct: 64 NVDGEGHLAMIKEVQRHAVRPEILHIDLLTVRRGERVEVEIPVHVEGE-VAPTAIHNVEE 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 NV+ E L +P+ +TVD+ DL++G+ ++ +D+ LP + +S + + + P Sbjct: 123 NVLVVEADAL----KVPEYLTVDITDLEVGEHVYAKDVTLPGNVTLVSDPELLVVNVSEP 178 Query: 188 IS 189 + Sbjct: 179 VE 180 >gi|216263570|ref|ZP_03435565.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] gi|215980414|gb|EEC21235.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] Length = 182 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + + ++P++ + S G+K+GG L Sbjct: 66 DDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLVG--ASIGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|218262818|ref|ZP_03477176.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] gi|218223113|gb|EEC95763.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] Length = 194 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 12/172 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 ++ K +++A D+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 6 LEGKSREVAATSADQ--KRALKAMRKNNEIPAVLYGG-EKVSHFTITKDSVRNLVYSPEI 62 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D GK+ + ++ KD Q PV+D ++H DFL+VS+ V + VPV + E + G Sbjct: 63 FVVELAID-GKKTMAIV-KDIQFQPVTDAILHMDFLEVSDNKPVVMEVPV--VLEGHAEG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-----SIHMEDIRL 167 +K GGKLN+ ++ + IP+ + ++++ L +G ++H E + L Sbjct: 119 VKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHFEGLEL 170 >gi|288921322|ref|ZP_06415604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] gi|288347296|gb|EFC81591.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] Length = 209 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + + Sbjct: 3 EVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTNVL 62 Query: 65 LTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LTL++ G EL +PK+ Q P+ H D + V+ G VTV V + I + Sbjct: 63 LTLELSGGTEL--ALPKEVQRHPIRGSYEHVDLVLVNRGERVTVEVALILIGDAHPD--- 117 Query: 123 QGGKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V +V+ L A ++P +I VD+ L+ G I + LP Sbjct: 118 -----TLVDQQVTALAVKADATSLPSTIEVDITGLEPGHGIAASQLELP 161 >gi|52078547|ref|YP_077338.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|52783909|ref|YP_089738.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|319648576|ref|ZP_08002790.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] gi|68053089|sp|Q65PG9|RL25_BACLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52001758|gb|AAU21700.1| general stress protein [Bacillus licheniformis ATCC 14580] gi|52346411|gb|AAU39045.1| Ctc [Bacillus licheniformis ATCC 14580] gi|317389343|gb|EFV70156.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] Length = 208 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVS 87 G +P +IYG + K +AL + ++ K L ++ TI+ LDI + V+ + Q DP+ Sbjct: 24 GYVPGVIYGRNLENKSVALDSIELLKILRAEG-KNTIINLDINGDQHSVMVTELQTDPLK 82 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D ++HADF V + + VPV E + GIKQGG L +E+S+ NIP +I Sbjct: 83 DSIVHADFKVVDMEAEMEATVPVNLTGE--AEGIKQGGVLQQPLYELSVTAKPKNIPQTI 140 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD++ L++ D + + DI S + + +A+I+ P Sbjct: 141 EVDISSLEVNDVLTVGDIPTKGDYSYNHEPDEVVASILPP 180 >gi|242057875|ref|XP_002458083.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] gi|241930058|gb|EES03203.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] Length = 264 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PA+++ + + + +++ +K I K L F+ Sbjct: 61 AVPRASSGRHVAAKERKAGRVPAVVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFFL 120 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 121 SRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMF 180 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 I E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 181 IGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 235 >gi|86742631|ref|YP_483031.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia sp. CcI3] gi|109893363|sp|Q2J5Z0|RL25_FRASC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86569493|gb|ABD13302.1| LSU ribosomal protein L25P [Frankia sp. CcI3] Length = 210 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 5/164 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + + Sbjct: 7 EVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGTNVL 66 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL++ + + KD Q P+ H D + V+ G V +PV+ I E + Sbjct: 67 LTLELAEGTELALAKDVQRHPIKGSFEHIDLVLVARGEKVVADIPVQVIGEPHPDTL--- 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ +++ A +P I VD+ L+ G SI + LP Sbjct: 124 --VDQQVTTIAVKADATRLPGPIEVDITGLEPGTSILARQLVLP 165 >gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] Length = 233 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 16/195 (8%) Query: 8 LSAVMR-DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++AV R K K AR +R +G IPA++YG D + + K I++ L+S++ TI Sbjct: 9 IAAVPRTGKFNKNHARRVRVSGLIPAVVYGAGQDSVAVTVDPKAITRILHSESGHNTIFD 68 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L + G +V + D+Q +P+ L+H DF +++ + V VPV G+K G Sbjct: 69 LSVEGTGVVKAMIVDWQYEPIKGKLLHIDFKRIAMDKAMRVSVPVML--TGVPVGVKNSG 126 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI-------RLPEKTSSMSQL 177 G L+ + EV + C +IP I VD+ L++ +IH+ D+ L E+T+ ++ + Sbjct: 127 GILDQILREVQIECLPGDIPSHIDVDVAGLELYGAIHVADLPHGGKIKFLEEETALVAHV 186 Query: 178 NI----TIATIVAPI 188 + A + AP+ Sbjct: 187 TVIKEEAAADVTAPV 201 >gi|212716015|ref|ZP_03324143.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] gi|212661382|gb|EEB21957.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] Length = 198 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR +R IPA +Y +P + L K+ + L N + T+ Sbjct: 7 LEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPE 160 >gi|193215984|ref|YP_001997183.1| 50S ribosomal protein L25/general stress protein Ctc [Chloroherpeton thalassium ATCC 35110] gi|226736298|sp|B3QWH6|RL25_CHLT3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193089461|gb|ACF14736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chloroherpeton thalassium ATCC 35110] Length = 199 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFMTTIL 65 L A R K + LR NG +PA +Y + +P I+LS K+ S R +Y+ L Sbjct: 6 LEAERRMPGKKSDLKQLRANGNVPATLY-HKGEPS-ISLSVKEQSLRKVIYTTESHIINL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E V+ KDYQ +P++D + HADF + V V VP+ F G+ +GG Sbjct: 64 RFTDGTEKPSVM-KDYQFNPLTDSITHADFQLLKSDEYVEVEVPILFTG--NPVGVVKGG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + H++ + C +++P+ ITVD++ + +G+S+H+ ++ Sbjct: 121 MVQATLHKLEIRCLPSDMPEHITVDISSMDMGESLHVGEL 160 >gi|226499442|ref|NP_001141875.1| hypothetical protein LOC100274018 [Zea mays] gi|194706262|gb|ACF87215.1| unknown [Zea mays] Length = 258 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 17/175 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + I++ A I K L F+ Sbjct: 60 AVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFL 119 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + +L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 120 SRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMF 179 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 I E+ SPG+++G N + LCPA+ +P I VDL++L +G + M D+++ Sbjct: 180 IGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 234 >gi|260577723|ref|ZP_05845658.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] gi|258604118|gb|EEW17360.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] Length = 219 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ + +L Sbjct: 10 TRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNEG-VNAVL 68 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ K + ++ + HAD L V G V V VPV F + +PG Sbjct: 69 ELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVVFTGQ-AAPGALVTQ 127 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +V+ ++L NIP+ ITVD+ +IGD I D+++P S +S+ + I +V Sbjct: 128 EADVI----TILADVLNIPEEITVDVEGKEIGDQILAGDLQMPGNASLVSEEDTLIINVV 183 >gi|224373133|ref|YP_002607505.1| 50S ribosomal protein L25/general stress protein Ctc [Nautilia profundicola AmH] gi|254801057|sp|B9LA47|RL25_NAUPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223589444|gb|ACM93180.1| ribosomal protein L25, Ctc-form [Nautilia profundicola AmH] Length = 178 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + LR++G + A IYG + A D K L +K + + + Sbjct: 2 LEGIIRESTSKAETKKLRRDGYLIANIYGKGQENINAAFKTGDFIKYLRNKEHL--VFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V V+ ++YQ PV+ L+H D L +G HVP++ + G+K G L Sbjct: 60 KVGDKEVKVVVQEYQKHPVTGELLHVDLLMAQDGVKSYYHVPIKV--KGTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + N+PD +D+ +L +GD+I + DI +PE +I + ++ Sbjct: 118 IYHRRRIKVKAAPENLPDFFELDVTNLDVGDNILIRDIEMPEGVECFLNPSIPVVGVI 175 >gi|323359424|ref|YP_004225820.1| ribosomal protein L25 [Microbacterium testaceum StLB037] gi|323275795|dbj|BAJ75940.1| ribosomal protein L25 [Microbacterium testaceum StLB037] Length = 209 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ K+ A +R+ GKG AR LR G+IPA+IYG+ ++P+ +AL + + N Sbjct: 3 EDNKVVAELRENFGKGFARRLRAAGKIPAVIYGHGTEPQHVALPGHQTALLIRRAN---A 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L LDI + V+ KD Q DPV I+ H D + V +G V V VPV + E S I Sbjct: 60 LLDLDIAGKSQLVLVKDVQKDPVRQIIEHIDLIVVKKGEKVQVDVPVVVVGEPFSGTIAM 119 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + VSL A +IP ++ VD+ + G I D++LP S +++ I Sbjct: 120 -----LDATTVSLEVEATHIPQNVEVDVEGAEDGTQITAADLKLPAGASLVTEPETLIVG 174 Query: 184 IVAPI 188 + P+ Sbjct: 175 VSVPL 179 >gi|255530495|ref|YP_003090867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] gi|255343479|gb|ACU02805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] Length = 192 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 5/162 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R+ VGK A+ LR G++PA++YG + A+ D+ +Y+ Sbjct: 2 KTIAISGSPRENVGKRDAKELRYEGKVPAVLYGG-KEQVHFAVVIADLRDAIYTPE--AN 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + I + I K+ Q P++D+L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 59 FVEIAINGNKIKAIIKELQFHPLTDVLLHVDFLQLFDDKEILMEIPVKLT--GTSPGVKM 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 GGKL ++ + ++P ++ V + L++G+ + D+ Sbjct: 117 GGKLVQKLRKLRVKAFPKDMPQAVEVSIAKLEVGNLFRVRDL 158 >gi|168044236|ref|XP_001774588.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674143|gb|EDQ60656.1| predicted protein [Physcomitrella patens subsp. patens] Length = 206 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 18/172 (10%) Query: 13 RDKVGKGSARLLRKNGQIPAIIY----GNMSDPKP-IALSAKDIS---KRLYSKNFMTTI 64 R GK ++ R+ G++P+I++ G++ K I++ K I KRL +F+++ Sbjct: 16 RHGSGKIVSKKERRVGRVPSIVFSQENGHIGGNKQLISVETKQIERLIKRLGKSSFLSST 75 Query: 65 LTLDI--------GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 L++ KE V+P+ L +D +++ F++ +++ V VP+ FI E+ Sbjct: 76 FDLEVYDDQGNVQAKE--RVLPRSIHLHAGTDKVMNVTFIRAPPTASLKVDVPLIFIGED 133 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 PGI++GG + + V CP N+IP I VDL+ L +G+ I + D+ +P Sbjct: 134 ACPGIRKGGYIYTMMRTVKYRCPGNSIPSGIEVDLSTLDMGEKILLRDLNVP 185 >gi|219684926|ref|ZP_03539867.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] gi|219671664|gb|EED28720.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] Length = 176 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG ++ + + + + +K+ ++K T+L L Sbjct: 1 LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNNVSHLKIKSSEFNKK-FAKFTDNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 60 DDGKLERCVFVKDVAENVARKLIYHIDFYEVDRRVELEKYVPIKLIG--ASVGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 V+ +V + ++P+ I +DL + GDS+ ++D+ LP + + N+ + TI Sbjct: 118 TVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVKLAENDENLEVVTI 175 >gi|229495615|ref|ZP_04389348.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] gi|229317598|gb|EEN83498.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] Length = 189 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 89/159 (55%), Gaps = 5/159 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +LSA +R+ +GK + + LRK G IPA+IYG + + ++ + +Y+ Sbjct: 2 KTFQLSADLREGLGKKATKSLRKQGIIPAVIYGGEA-THHLTVTQDAVRNLIYTPEIFD- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L + + + KD Q PV+D ++H DFL+V++ + + VPV + E + G++ Sbjct: 60 -IDLSVAGKTCKAVLKDIQFHPVTDEILHIDFLEVNKDKAIEMEVPV--VLEGHAAGVRA 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GGKL + ++ + + IP+ + +++ +L++G S+ + Sbjct: 117 GGKLVLEMRKLRVKAIYDQIPERLHINVENLELGKSMQV 155 >gi|34558363|ref|NP_908178.1| 50S ribosomal protein L25/general stress protein Ctc [Wolinella succinogenes DSM 1740] gi|71153675|sp|Q7M7U7|RL25_WOLSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34484082|emb|CAE11078.1| PUTATIVE 50S RIBOSOMAL PROTEIN L25 [Wolinella succinogenes] Length = 178 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 6/162 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K + + LR +G + A IYG + A D + + SK I + Sbjct: 2 LEGIIRESISKSAVKALRNDGYLIANIYGKGQENTHCAFKKNDFIRAVKSKT--NIIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQ DP++ L+H D + V G VPV+ K G+K G L Sbjct: 60 KVGGKEINVVVQEYQKDPITSDLLHVDLMLVQPGVETKFLVPVKTAGSAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V + C N+P S +D++DL +GD+I + D LPE Sbjct: 118 ILSKKRVKVKCSPENLPASYELDVSDLDVGDAILVRD--LPE 157 >gi|115462913|ref|NP_001055056.1| Os05g0270000 [Oryza sativa Japonica Group] gi|55168097|gb|AAV43965.1| unknown protein [Oryza sativa Japonica Group] gi|113578607|dbj|BAF16970.1| Os05g0270000 [Oryza sativa Japonica Group] gi|125551610|gb|EAY97319.1| hypothetical protein OsI_19240 [Oryza sativa Indica Group] gi|215704308|dbj|BAG93148.1| unnamed protein product [Oryza sativa Japonica Group] Length = 265 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + +++ +K I K L F+ Sbjct: 62 AVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFFL 121 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 122 SRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLMF 181 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 I ++ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 182 IGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 236 >gi|224534151|ref|ZP_03674731.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] gi|224514576|gb|EEF84890.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] Length = 176 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + +++ + +K+ ++K T+L L Sbjct: 1 LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKINSSEFNKK-FAKFTDNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + + ++P++ I S G+K+GG L Sbjct: 60 DDGKFERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLIG--ASIGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GD + ++D+ LP Sbjct: 118 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDRVLLKDLLLP 158 >gi|188997588|ref|YP_001931839.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932655|gb|ACD67285.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] Length = 197 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 4/170 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A+ R+K K + RK G +PA +YG + ++ K + + + ++ ++ Sbjct: 6 EWKALPREKAVKSELKNYRKKGYLPAEVYGKGHPNISVYINKKSLLSKPHGNFLISLVVE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D +L I KD Q + D IH D +V++G + + VPV F K+ G+++GG Sbjct: 66 GDPEPKLC--ILKDIQYSYLGDEPIHVDLYEVTQGLELDIEVPVEFTG--KAIGLEKGGI 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 H + + NIP+ I +D+++L +GD +H+ DI+ PE M+ Sbjct: 122 FEAHLHSILVRTTPRNIPEKIVIDVSNLDLGDVLHVRDIQAPEGVKIMTH 171 >gi|325105366|ref|YP_004275020.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] gi|324974214|gb|ADY53198.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] Length = 196 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +S R+ VGK A+ LR +G++PA++YG + A+ A + +YS + Sbjct: 2 KTIAISGSSRENVGKRDAKELRYDGKVPAVLYGG-KEQIHFAVDAPALRDLVYSAD--VH 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L++ I +D Q P+++ ++H DFLQ+ + +T+ +PV+ SPG+K Sbjct: 59 FAELEVNGSKYKAILQDIQFHPLTEKILHVDFLQLFDDKKITMEIPVKLTGT--SPGVKV 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GGKL ++ + ++P + V L L++G S + D++ PE Sbjct: 117 GGKLVQKLRKLKVNALPKDMPQYVEVSLEPLEVGKSTRVRDLK-PE 161 >gi|57242055|ref|ZP_00369995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315638227|ref|ZP_07893409.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] gi|57017247|gb|EAL54028.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315481763|gb|EFU72385.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] Length = 178 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 4/165 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K T I + Sbjct: 2 LEGIIRESIGRKAAKALKRDGYLIANIYGKGLENIHAAFKVNDFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGAKTLSVVVVDYQKDPVTSDLKHVDLKVAQKGVVSKYMVPVKVVGT--AIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + + C A N+P+ +D++ L +GD++ ++DI +P+ S Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVKDIVVPQGVS 162 >gi|239618100|ref|YP_002941422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] gi|239506931|gb|ACR80418.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] Length = 215 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A RD K A+ L KNG+IPA++YG + PI++ ++ + + + TT Sbjct: 3 EVRLPAEKRDTSVK--AKDLLKNGKIPAVVYGPDVESFPISVDKVEVMRHI-NHIVETTP 59 Query: 65 LTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +I K+ H K Q D VSD +IH DF ++G + +H+P+ FI K+ G Sbjct: 60 IVFEIEENGEKKEYHGFLKAVQRDRVSDAIIHMDFYIPAKGHKMEIHIPIHFI--GKAKG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L + + + + I +++ V++ L +GD + ++DI LPE ++ Sbjct: 118 VEKGGILEHIITHLPVETLPSTIVEALEVNIEHLDLGDVLRVKDIPLPEGMKVLADPEEP 177 Query: 181 IATIVAPIS 189 + I P S Sbjct: 178 VVVIEVPRS 186 >gi|332982255|ref|YP_004463696.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] gi|332699933|gb|AEE96874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] Length = 201 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + G G+A LR++G IP ++YG P + + K++ + + SK+ +L L+I + Sbjct: 12 RQETGSGAAARLRRSGMIPGVVYGKSIAPINVKVPVKEL-REIISKHGRNAVLNLNIEGQ 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + + KD Q D + H DF + + VP+R E +GG + + Sbjct: 71 TLAAVIKDLQHDLMGTQYEHVDFQHILMNEVIKTKVPIRLQGEGLIE--SKGGLVMLQLD 128 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 E+ + C +++P+ I +D++D+++G S+ + DI +PE +S + + ++ SG Sbjct: 129 ELDVECLPDSLPEVIEIDVSDMEVGQSLKVADINVPENVRIISNPDEIVLAVMETKSG 186 >gi|297582391|ref|YP_003698171.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] gi|297140848|gb|ADH97605.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] Length = 213 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 3/159 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+++ + +R G IPA++YG KP+ + D K Y T + +L Sbjct: 5 LKAAPRNEMKGSTLTTIRSAGWIPAVVYGKEYGNKPVQVEEIDFIKT-YRAEGKTGVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ E V+ D Q D + + +H DF + + VPV + E + G+K GG L Sbjct: 64 DVEGEKTDVMIYDIQYDMMKNQYVHIDFYAANMKEEMDADVPVNVVGE--AQGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 E+S+ +PDSI V++ +L++ DSI ++D++ Sbjct: 122 QQGVFELSVRALPKELPDSIDVNVEELEVNDSIFVKDLK 160 >gi|282865453|ref|ZP_06274504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] gi|282559497|gb|EFB65048.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] Length = 194 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 7/164 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ Q+P ++YG+ ++P + L D+ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRIRRANQVPGVVYGHGAEPVHVTLPGHDLLLALRTPNVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q + + + H D L V G V V V V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRNAIKGDIEHVDLLTVKRGEKVNVEVAVHA-EGDLAPGANL- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 L V + + + A +IP+S+TV + L G S+ +DI LP Sbjct: 118 --LEFVMNTLLVEAEATHIPESVTVSVAGLDAGASVLAKDIPLP 159 >gi|167463174|ref|ZP_02328263.1| ribosomal protein L25 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381193|ref|ZP_08055196.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154769|gb|EFX47040.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 199 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 9/183 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+K +G LRK G+IPAI+YG P+AL K + L K ++ L Sbjct: 5 LQGTTRNKGTRGELNKLRKEGKIPAIVYGKTLVSSPLALEKKHVLALL--KTHPNAVIDL 62 Query: 68 DI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 DI GK V + Q DP++ ++H D Q++ V V + F E +K+G Sbjct: 63 DIPEVGKRPVMI--SQVQRDPINGDVVHLDLHQINLDEPVRTAVALEFTGEPAD--VKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + E+ + C + +P+ + VD++ L + ++ + DI +P+ ++ N + TI Sbjct: 119 GILQIQTAELEVRCLPDRLPEQLKVDISKLGVNQNLLVSDIEVPQGVEVVTDGNEVLITI 178 Query: 185 VAP 187 + P Sbjct: 179 LVP 181 >gi|227545903|ref|ZP_03975952.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213697|gb|EEI81543.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 206 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R + GKG AR LR +IPA IY +P + L ++ + L N + TI Sbjct: 6 KLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTNALFTI-A 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D ++ V KD Q +PV I+ H DFL+V G + V VPV F+ G +G Sbjct: 65 FDGNTKMAVV--KDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPV-FVE-----GTPKGAA 116 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V + L G + +D+ LPE Sbjct: 117 VAFVDIQELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPE 160 >gi|91204543|emb|CAJ70771.1| similar to 50S ribosomal protein L25 (TL5) [Candidatus Kuenenia stuttgartiensis] Length = 212 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 5/146 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + R LR G IPA++YG+ D +++ + + L + M + L D KE V+ K Sbjct: 18 AVRKLRATGHIPAVVYGHKEDNVLLSVDGGEFGRVLNAGARMIS-LAYDRTKE--SVLIK 74 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q D +SD ++H DF +VS VT+ VP+ I + G+K GG L + + C Sbjct: 75 DVQYDNLSDKVLHVDFARVSMDERVTLKVPI--ILSGSAVGVKAGGVLTQTMKNIEIECF 132 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 +P+ I V++++L++G SIH++++ Sbjct: 133 PAAVPEDIKVNVSELEMGKSIHVKEL 158 >gi|303327047|ref|ZP_07357489.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] gi|302863035|gb|EFL85967.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] Length = 205 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 9/187 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-KRLYSKNFMTT 63 E LS R+ GKG + LR IP + Y + I + A + ++LY + TT Sbjct: 4 EKTLSVQKREDCGKGPSGRLRSQELIPGVFYTGKGEN--ITVQAPTLPLEKLYEEVGHTT 61 Query: 64 ILTLDI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L+I G++ H V+ Q P H DF V V V VP+ F+ ++ Sbjct: 62 VFNLEIDENGQKSTHPVLIWQVQRHPYKKCFTHIDFYGVDLNKEVKVDVPLEFVGVSR-- 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K GG L V L ++P IT+D++D+ I D+++M D++LP +++ N Sbjct: 120 GVKLGGVLETYRESVRLSSKPLDMPKKITIDVSDMDINDTVNMADLQLPANVTAVYDQNF 179 Query: 180 TIATIVA 186 + +++A Sbjct: 180 AVVSVLA 186 >gi|308235427|ref|ZP_07666164.1| 50S ribosomal protein L25/general stress protein Ctc [Gardnerella vaginalis ATCC 14018] gi|311114835|ref|YP_003986056.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] gi|310946329|gb|ADP39033.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] Length = 205 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R++ GKG AR LR IPA IY ++P + L ++ + L N + T+ Sbjct: 7 LEGEVRNEFGKGVARRLRVANLIPASIYAGGAEPVHVTLPMRETTLSLRHAN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGNESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ + V+++ L G + +D++LPE Sbjct: 118 AFVDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPE 160 >gi|171910045|ref|ZP_02925515.1| 50S ribosomal protein L25/general stress protein Ctc [Verrucomicrobium spinosum DSM 4136] Length = 224 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R G + + LRK G IPA+IYG + +++K + + ++ L Sbjct: 7 LQAKVRTAEGTSAVKRLRKAGSIPAVIYGKKHSNAKVEVNSKTFTAIIEHSASDNILVNL 66 Query: 68 DIGKELVHVIP--KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 I E + ++ Q D + ++H DF V+ + VPV + K+GG Sbjct: 67 KIDGEANDALALVQEVQHDYLRGGILHVDFHAVAADEDIHAAVPVVLSGIEAAE--KKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 KL V H + + C ++P+SI +D++ L +G++ H+ ++ LPE SS + ++ +A + Sbjct: 125 KLEFVLHSLEVHCLPKDLPESIALDVSYLNVGEATHVSELALPEGVSSKLEGDVVVAILK 184 Query: 186 API 188 P+ Sbjct: 185 EPL 187 >gi|169628236|ref|YP_001701885.1| 50S ribosomal protein L25 [Mycobacterium abscessus ATCC 19977] gi|169240203|emb|CAM61231.1| 50S ribosomal protein L25 [Mycobacterium abscessus] Length = 215 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 9/184 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R GKG++R R++GQ+PA++YG+ + P+ + L A D + L ILTL Sbjct: 12 LDVTVRTDTGKGASRRARRDGQVPAVLYGHGTTPEHLNLPAHDFAAVLRHSG-TNAILTL 70 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I G+E + + K ++ P+ L+HAD L V +G VTV V V + S G Sbjct: 71 NIEGREQL-ALTKTIEIHPIRRNLVHADLLVVRKGEKVTVEVTVHIEGDAAS-----GTL 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + L+ G I I LP+ + +S + +V Sbjct: 125 VTQDANTLEIEAEALSIPEGLTVSVEGLEAGTQITAGSIELPKGVTLISDPETLVVNVVT 184 Query: 186 APIS 189 AP + Sbjct: 185 APTA 188 >gi|68536580|ref|YP_251285.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium jeikeium K411] gi|109893356|sp|Q4JU40|RL25_CORJK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68264179|emb|CAI37667.1| 50S ribosomal protein L25 [Corynebacterium jeikeium K411] Length = 214 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ + +L Sbjct: 5 TRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNEG-VNAVL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ K + ++ + HAD L V G V V VPV F + +PG Sbjct: 64 ELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVIFTGQ-AAPGALVTQ 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +V+ ++L NIP+ ITVD+ +IGD + D+++P S +S+ + I +V Sbjct: 123 EADVI----TILADVLNIPEEITVDVEGKEIGDQVLAGDLQMPGNASLVSEEDTLIINVV 178 >gi|23335022|ref|ZP_00120260.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Bifidobacterium longum DJO10A] gi|23465427|ref|NP_696030.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum NCC2705] gi|189439450|ref|YP_001954531.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum DJO10A] gi|239622048|ref|ZP_04665079.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132858|ref|YP_004000197.1| rply [Bifidobacterium longum subsp. longum BBMN68] gi|317483594|ref|ZP_07942574.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|322688989|ref|YP_004208723.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] gi|322690958|ref|YP_004220528.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|71153122|sp|Q8G5Z8|RL25_BIFLO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736281|sp|B3DSB4|RL25_BIFLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23326077|gb|AAN24666.1| probable 50S ribosomal protein L25 [Bifidobacterium longum NCC2705] gi|189427885|gb|ACD98033.1| Ribosomal protein L25 [Bifidobacterium longum DJO10A] gi|239515239|gb|EEQ55106.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516979|emb|CBK70595.1| LSU ribosomal protein L25P [Bifidobacterium longum subsp. longum F8] gi|311773827|gb|ADQ03315.1| RplY [Bifidobacterium longum subsp. longum BBMN68] gi|316914969|gb|EFV36411.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|320455814|dbj|BAJ66436.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|320460325|dbj|BAJ70945.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] Length = 206 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R + GKG AR LR +IPA IY +P + L ++ + L N + TI Sbjct: 6 KLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTNALFTI-A 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D ++ V KD Q +PV I+ H DFL+V G + V VPV F+ G +G Sbjct: 65 FDGNTKMAVV--KDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPV-FVE-----GTPKGAA 116 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V + L G + +D+ LPE Sbjct: 117 VAFVDIQELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPE 160 >gi|320010340|gb|ADW05190.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces flavogriseus ATCC 33331] Length = 195 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 7/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A +R + GKG+AR R+ +P ++YG+ ++P I L ++ L + N + Sbjct: 3 EIKLDATVRTEFGKGAARRTRRANLVPGVVYGHGAEPVHINLPGHELLLALRTANVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q + + + H D L V G V V + V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRNALKGNIEHVDLLTVKRGEKVNVEIAVHA-EGDLAPGANL- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L V + + + A +IP+S+TV + L GDSI +DI LP+ Sbjct: 118 --LEYVQNTLLVEAEATHIPESVTVSVAGLDAGDSIAAKDITLPK 160 >gi|213692446|ref|YP_002323032.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254801035|sp|B7GS74|RL25_BIFLI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|213523907|gb|ACJ52654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458591|dbj|BAJ69212.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 207 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R + GKG AR LR +IPA IY +P + L ++ + L N + TI Sbjct: 6 KLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTNALFTI-A 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D ++ V KD Q +PV I+ H DFL+V G + V VPV F+ G +G Sbjct: 65 FDGNTKMAVV--KDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPV-FVE-----GTPKGAA 116 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V + L G + +D+ LPE Sbjct: 117 VAFVDIQELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPE 160 >gi|119953561|ref|YP_945771.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia turicatae 91E135] gi|254801036|sp|A1R0K9|RL25_BORT9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119862332|gb|AAX18100.1| LSU ribosomal protein L25P [Borrelia turicatae 91E135] Length = 182 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R G AR +R +IPA++YG SD I +++ + +KR ++K T+L L GK Sbjct: 12 RLNFGSLCARRIRAKSEIPAVVYGKESDVLHIKIASNEFNKR-FAKFTDNTVLILSDGKV 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V KD + ++ H DF +V + ++ ++F+ S G+K+GG L+V+ Sbjct: 71 ERCVFIKDVSENITKGLIYHVDFYEVDRNRDIERYIAIKFVG--ASIGVKEGGTLSVLRT 128 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ + ++P+ + VDL +K G I +DI LPE Sbjct: 129 KIKVKALPLDLPEFVEVDLTPVKKGHQITFKDIVLPE 165 >gi|225551705|ref|ZP_03772649.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] gi|225371732|gb|EEH01158.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] Length = 172 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L LD GK Sbjct: 1 YRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFTDNTVLILDDGK 59 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 V KD + S ++ H DF +V + +VP++ I S G+K+GG L V+ Sbjct: 60 LERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGILTVLK 117 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V + ++P+ I +DL + GD + +D+ LP Sbjct: 118 EQVKVRSLPLDLPEFIELDLTPVNKGDGVLFKDLVLP 154 >gi|283783322|ref|YP_003374076.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] gi|283442055|gb|ADB14521.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] Length = 207 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + GKG AR LR IPA +Y ++P + L ++ + L N + T+ Sbjct: 7 LEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GKE + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ + V+++ L G + +D++LPE Sbjct: 118 AFVDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPE 160 >gi|257870925|ref|ZP_05650578.1| ribosomal protein L25 [Enterococcus gallinarum EG2] gi|257805089|gb|EEV33911.1| ribosomal protein L25 [Enterococcus gallinarum EG2] Length = 204 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 3/143 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PAI+ G D PIA++A ++ +RL +N + T++T+++ + V+ + K++Q Sbjct: 21 LRHEGKVPAIVNGYQVDSTPIAVNAAEL-ERLLRENGLNTVITMNLEGKKVNTLIKEFQS 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + L H +F+ V V + + + + G+K GG L + V + + + Sbjct: 80 DTFTRALTHVEFISVDMNEETEVEAELTLVGD--AAGVKAGGVLTQNLYSVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIR 166 P+ I VD+ L+IGD++ + D+ Sbjct: 138 PERIEVDVTGLEIGDALTVGDLE 160 >gi|298252739|ref|ZP_06976533.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] gi|297533103|gb|EFH71987.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] Length = 207 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + GKG AR LR IPA +Y ++P + L ++ + L N + T+ Sbjct: 7 LEGELRTEFGKGVARRLRVAQLIPASLYAGGAEPVHVTLPMRETTLALRHAN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GKE + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ + V+++ L G + +D++LPE Sbjct: 118 AFVDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPE 160 >gi|78357170|ref|YP_388619.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109893360|sp|Q30ZH2|RL25_DESDG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78219575|gb|ABB38924.1| LSU ribosomal protein L25P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 193 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LS R+ +GKG+ R LR ++P I Y + P+A+ + K LY TT Sbjct: 3 QQMTLSVQKREGLGKGANRKLRTAKKVPGIFYNSEGKNIPVAIDGTQLEK-LYETAGKTT 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI E + + P H D V + +P++ K G K Sbjct: 62 VFNLDIEGETAPCLIWQIERHPYKPFFTHVDLFGVDMEKPIKARIPLKITGVAK--GTKI 119 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG++ V V + ++P I ++++++++GD++H+ D++L E + N I Sbjct: 120 GGRMEVYRDFVDVFTKPGSMPKVIDINVSNMEMGDAVHVADLKL-EDGHCIYDSNYVIVR 178 Query: 184 IVAPISG 190 + AP G Sbjct: 179 VSAPRGG 185 >gi|296454050|ref|YP_003661193.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] gi|296183481|gb|ADH00363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] Length = 207 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R + GKG AR LR +IPA IY +P + L ++ + L N + TI Sbjct: 6 KLEGEARSEFGKGVARRLRVAKKIPATIYAGGEEPAFVTLPMRETTLALRHTNALFTI-A 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D ++ V KD Q +PV I+ H DFL+V G + V VPV F+ G +G Sbjct: 65 FDGNTKMAVV--KDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPV-FVE-----GTPKGAA 116 Query: 127 LNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V + L G + +D+ LPE Sbjct: 117 VAFVDIQELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPE 160 >gi|298530961|ref|ZP_07018362.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] gi|298508984|gb|EFI32889.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] Length = 216 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 7/186 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R++ GK +AR LRKN +P + Y + + P+ + K +++ T ++ L Sbjct: 7 LKVEVRNEKGKSAARKLRKNDYVPGVYYDSSGETLPLKVRNGPFYK-AWNQVGTTNVVEL 65 Query: 68 DIGKE-LVHVIP-KDYQLD--PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + H P + +D P + +H DF V VT+ VPV K G + Sbjct: 66 EYTHSGETHRKPCLIWSIDRHPYKKVYMHVDFYGVDLTKEVTIAVPVEVKGTPK--GAED 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + + L C NIP +T+D++ L IGD+I++ED+++P + N + Sbjct: 124 GGIMRIFRQTLDLTCLPANIPSQVTIDVSKLDIGDNIYIEDLKMPAGAKVTFEENFAVVG 183 Query: 184 IVAPIS 189 +V P+ Sbjct: 184 LVPPMQ 189 >gi|283455970|ref|YP_003360534.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] gi|283102604|gb|ADB09710.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] Length = 198 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR LR IPA +Y P + L K+ + L N + T+ Sbjct: 7 LEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G++ I KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPE 160 >gi|171743014|ref|ZP_02918821.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] gi|171278628|gb|EDT46289.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] Length = 212 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR LR IPA +Y P + L K+ + L N + T+ Sbjct: 21 LEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---ALFTI 77 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G++ I KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 78 KYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 131 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 132 AFVDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPE 174 >gi|225848300|ref|YP_002728463.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurihydrogenibium azorense Az-Fu1] gi|225644287|gb|ACN99337.1| ribosomal protein L25, Ctc-form [Sulfurihydrogenibium azorense Az-Fu1] Length = 196 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 4/170 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A+ R K K + R G IPA +YG + + K + R + NF+ +L Sbjct: 6 EWKALPRKKGTKSEVKQNRMKGLIPAEVYGKGHPNVSVYIQKKALLSRPHG-NFLINLL- 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ E I KD Q + + D IH D +V+ G + VPV F+ K+ G+++GG Sbjct: 64 VEGDPEPKLCILKDIQYNYLGDEPIHVDLYEVTSGVEFDIEVPVEFVG--KAKGVEKGGI 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 H + + NIP+ I VD+++L IGD +H+ DI PE M+ Sbjct: 122 FEAHLHSIIVRTEPKNIPEKIVVDVSNLDIGDVLHVRDITPPEGVKIMTH 171 >gi|20808386|ref|NP_623557.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter tengcongensis MB4] gi|71153671|sp|Q8R8L3|RL25_THETN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|20516998|gb|AAM25161.1| Ribosomal protein L25 (general stress protein Ctc) [Thermoanaerobacter tengcongensis MB4] Length = 199 Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 9/183 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRL--YSKNFMTTI 64 L AV R+ GK +AR L+ G +PAI+YG +M++ P+A+ + K L Y +N + + Sbjct: 6 LEAVKRE-TGKSAARRLKNQGYVPAIMYGKDMTENIPLAVEYTKLQKLLQKYGRNVLLNV 64 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + K+ Q D + +IH DF +VS + VP+RF E +G Sbjct: 65 V---VNGTTHTALIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLRF--EGIGLIESKG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + E+++ + IP I VDL+ L+IGD++ ++DI +PE + + +I Sbjct: 120 GIVQHQLWELTVESLPDKIPQEIVVDLSHLEIGDTLFVKDIPVPEGVKVLDDPEEIVVSI 179 Query: 185 VAP 187 + P Sbjct: 180 LVP 182 >gi|110597921|ref|ZP_01386203.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] gi|110340498|gb|EAT58984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] Length = 199 Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K A LRKNG +PA+IY + P++++ + K ++S L G+ + Sbjct: 13 IKKKDAEKLRKNGIVPAVIYHKGEETIPVSVNEIALKKLVHSAESHIIDLQFPDGR-IKR 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 K Q PV+D +IH DF + + + VPV + S G+++GG+L ++ H ++ Sbjct: 72 SFIKQVQFHPVTDRIIHTDFQLFAADEVIELEVPVSVTGD--SIGVEKGGRLQIIRHALT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + ++PD + VD+ L+IG SIH+ +I Sbjct: 130 IKGKPEDMPDHLIVDVTALEIGHSIHVREI 159 >gi|310287383|ref|YP_003938641.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] gi|309251319|gb|ADO53067.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] Length = 208 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N + Sbjct: 5 IKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN---ALF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G + + KD Q +PV I+ H DF +V G + V VPV F+ G +G Sbjct: 62 SISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGA 115 Query: 126 KLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V+++ L G + ++D+ LPE Sbjct: 116 AVAFVDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPE 160 >gi|224282940|ref|ZP_03646262.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|311064224|ref|YP_003970949.1| 50S ribosomal protein L25P RplY [Bifidobacterium bifidum PRL2010] gi|313140099|ref|ZP_07802292.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|310866543|gb|ADP35912.1| RplY LSU ribosomal protein L25P [Bifidobacterium bifidum PRL2010] gi|313132609|gb|EFR50226.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] Length = 208 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N + Sbjct: 5 IKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN---ALF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G + + KD Q +PV I+ H DF +V G + V VPV F+ G +G Sbjct: 62 SISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGA 115 Query: 126 KLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + V E+ + N+P+ I V+++ L G + ++D+ LPE Sbjct: 116 AVAFVDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPE 160 >gi|257456706|ref|ZP_05621896.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] gi|257445899|gb|EEV20952.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] Length = 223 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R GK +A R+ ++PA+IY + I + +D K L+ +T++T+ Sbjct: 17 LTACRRTGFGKAAAAKCRRASRLPAVIYDHTGHSTAIDVPYRDFEK-LFKTVTESTLITV 75 Query: 68 DIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGG 125 + K+ V KDYQ D VSD + HADF V G + + +R + SP +QG Sbjct: 76 KVDEKDEYEVFIKDYQYDIVSDKVSHADFYAVERGQLLRTKIQIRL---SGSPEACRQGA 132 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L E+ + C ++P+ I V++ L ++IH+ DI++PE ++ ++ +A + Sbjct: 133 VLETGIAELEVECLPRDLPERIIVNVETLGANEAIHVRDIKVPEGVKILTDADLAVAMV 191 >gi|289551700|ref|YP_003472604.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315660332|ref|ZP_07913185.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] gi|289181231|gb|ADC88476.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315494621|gb|EFU82963.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] Length = 216 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 7/161 (4%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILT 66 S + + K + + +R G++PA++YG + + + + K R +N ++ Sbjct: 6 SIIRQGKQTRSELKKIRSLGKVPAVVYGYSTKNTSVKVDEVEFIKVIREVGRN---GVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVHLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + + + NIP++I VD+ DL+I DS + D+++ Sbjct: 121 VEQPLFYLQVTATPENIPEAIEVDVTDLQINDSYTVADVKV 161 >gi|160902897|ref|YP_001568478.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] gi|160360541|gb|ABX32155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] Length = 219 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++ RD K A+ R IPA +YG + + K I + K++ L K TT++ Sbjct: 6 KMNVNRRD--SKVKAKKFRNEKLIPAEVYGPALKENKHINIPYKELESML-EKVSETTLI 62 Query: 66 TLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L++ +E K Q VSD IH DF EG + + +P+ F E + G+ Sbjct: 63 ELNVKGEDSEEKFTCFVKSVQRHKVSDQPIHVDFYVPEEGRKMNLRIPLEF--EGEPIGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNI 179 QGG LN HE+ + ++I DSI VD++ LK+G+S+ + DI+ LP+ S+ + Sbjct: 121 TQGGYLNTYVHEIPVAILPSDIVDSIKVDISALKLGESLSVSDIKSLLPKSAESLLEDEE 180 Query: 180 TIATIVAPISG 190 + +++ P S Sbjct: 181 LVISVIEPKSA 191 >gi|281356645|ref|ZP_06243136.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] gi|281316772|gb|EFB00795.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] Length = 209 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GK ++R RK GQIPA +Y + K + A + ++ + + + ++TL G Sbjct: 13 RKDFGKNASRRARKAGQIPASVYSKGKESKSFLVDAD--AWKVLTGHHGSHMVTLKNGDA 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 +H + K+ Q + + + + H DF +V + VPV E S G GG L H Sbjct: 71 EIHALIKEVQFNYLKNYVYHIDFQEVDMDKEIVAAVPVHAHGE--SVGAAHGGILEQELH 128 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 E+ ++C ++P+++T D+ L G+ + ++D+ LP+ Sbjct: 129 ELEVICRPADLPEAVTADVTKLDKGEHLCVKDLVLPQ 165 >gi|120437821|ref|YP_863507.1| 50S ribosomal protein L25/general stress protein Ctc [Gramella forsetii KT0803] gi|166223685|sp|A0M745|RL25_GRAFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|117579971|emb|CAL68440.1| 50S ribosomal protein L25 [Gramella forsetii KT0803] Length = 220 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 86/164 (52%), Gaps = 7/164 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR--LYSKNFM 61 K ++ R+ VGK + + LR GQ+P ++YG D P+ +A++IS + +Y+ + Sbjct: 2 KSITINGSKRESVGKKATKALRNAGQVPCVLYGVEGD--PLHFAAEEISFKNLVYTPDVH 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + L G E I +D Q P++D ++H DF Q+ +T+ +P+ E + G+ Sbjct: 60 TVKIKLKSG-ESYDAILQDIQFHPLTDAILHIDFYQIFGEKPITMEIPIH--TEGVARGV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 K GG L + + ++PD I +++ LKIG +++ + Sbjct: 117 KNGGVLRYNLRRLKVRGLPADLPDYIVANVSKLKIGQKLYVTGV 160 >gi|224531516|ref|ZP_03672148.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] gi|224510981|gb|EEF81387.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] Length = 182 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L L Sbjct: 7 LSCEYRSSFGSSNARRIRAKYEIPAVVYGQGNDVSHLQIKSSEFNKK-FAKFTDNTVLIL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + GK V KD + S ++ H DF +V + +VP++ S G+K+GG L Sbjct: 66 NDGKLERCVFVKDVAENIASKLIYHIDFYEVDRHVELERYVPIKLTG--ASVGVKEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 124 TVLKEQVKVKSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 164 >gi|300864146|ref|ZP_07109041.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] gi|300337874|emb|CBN54187.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] Length = 201 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 97/171 (56%), Gaps = 16/171 (9%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALS--AKDISKRLYSKNFMTTILTLDI------GKELVH 75 LR++G IPA++YG+ S + IAL+ AK + L ++ L+I GK L+ Sbjct: 19 LRRSGLIPAVLYGH-SGAESIALTINAKTVETLLKKHVVNNALIQLNIPDISWSGKTLL- 76 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEV 134 ++ Q+ P H F V+ ++ V V + FI E + G+K +GG L+ V ++ Sbjct: 77 ---REVQVHPWKGHPYHLSFFSVATQDSLEVEVNLHFIGE--AVGVKMEGGILDPVLTQL 131 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L C +NIP++I VD++++ +GD++H+ +++LPE + + + + + +++ Sbjct: 132 KLKCKPDNIPEAINVDISEMHVGDALHIHELQLPEGVTPVGEPDQVVVSVL 182 >gi|225850827|ref|YP_002731061.1| 50S ribosomal protein L25/general stress protein Ctc [Persephonella marina EX-H1] gi|225645558|gb|ACO03744.1| ribosomal protein L25, Ctc-form [Persephonella marina EX-H1] Length = 199 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 4/182 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + + A+ R K + RK G IP +YG + + K ++ R K Sbjct: 3 QRIEWQAIPRTVGKKSEVKSFRKKGYIPVEVYGKGRENAHAYIYWKLLADR--PKGMFLI 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L ++ KE I KD Q + + D IH D +V+ G + V VPV + + K G++ Sbjct: 61 DLKIEGEKEPRVCILKDIQYNYLGDQPIHIDLYEVTFGVELDVDVPVELVGKPK--GLEV 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L H +++ IPD I VD++DL +GD +H+ DI PE M + IA Sbjct: 119 GGVLEQHLHTITIRTVPRKIPDRIEVDVSDLDVGDVLHVRDITPPEGVRIMENPDEVIAV 178 Query: 184 IV 185 ++ Sbjct: 179 VI 180 >gi|297799630|ref|XP_002867699.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] gi|297313535|gb|EFH43958.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] Length = 257 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKNFM 61 AV R GK + RK G++P+II+ + + + I++ I K L F+ Sbjct: 56 AVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFL 115 Query: 62 TTILTLDIGKEL--------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFI 113 + + +++ E+ V +P+ L +D ++ F++ G+ + V +P+ FI Sbjct: 116 SRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFI 175 Query: 114 NENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 176 GDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKV 229 >gi|15236554|ref|NP_194093.1| 50S ribosomal protein-related [Arabidopsis thaliana] gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis thaliana] gi|7269210|emb|CAB79317.1| putative protein [Arabidopsis thaliana] gi|18253005|gb|AAL62429.1| putative protein [Arabidopsis thaliana] gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis thaliana] gi|21594031|gb|AAM65949.1| unknown [Arabidopsis thaliana] gi|332659385|gb|AEE84785.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 264 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKNFM 61 AV R GK + RK G++P+II+ + + + I++ I K L F+ Sbjct: 56 AVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFL 115 Query: 62 TTILTLDIGKEL--------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFI 113 + + +++ E+ V +P+ L +D ++ F++ G+ + V +P+ FI Sbjct: 116 SRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFI 175 Query: 114 NENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 176 GDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKV 229 >gi|256389402|ref|YP_003110966.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] gi|256355628|gb|ACU69125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] Length = 207 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 12/189 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R + GKG AR R ++PA++YG+ + I L D+ L + N + Sbjct: 3 QIRISAEDRTEFGKGFARRARAVNKVPAVVYGHGEPVRHILLPGHDLMIALRTPNVL--- 59 Query: 65 LTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L L+ G V+PKD Q DPV L H D + V G VTV +P+ E + Sbjct: 60 LNLEFGDGKAQLVLPKDVQKDPVKRTLEHVDLVLVRSGEKVTVDIPITVTGE-----VVG 114 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 G L+ + +++ A +IP I VD++ + G + + D+ LP E + QL + Sbjct: 115 GAVLDHSLNNLTVTAEATHIPTGIEVDVDRKEEGFQLFVRDLELPAGSELVTDGDQLVLQ 174 Query: 181 IATIVAPIS 189 + A +S Sbjct: 175 VVVTRAEVS 183 >gi|306822823|ref|ZP_07456199.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] gi|304553455|gb|EFM41366.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] Length = 212 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR LR IPA +Y P + L K+ + L N + T+ Sbjct: 21 LEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---ALFTI 77 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + I KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 78 KYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 131 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 132 AFVDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPE 174 >gi|313674668|ref|YP_004052664.1| LSU ribosomal protein l25p [Marivirga tractuosa DSM 4126] gi|312941366|gb|ADR20556.1| LSU ribosomal protein L25P [Marivirga tractuosa DSM 4126] Length = 214 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 9/164 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R +GK A+ LR +PA++YG + I A I R Sbjct: 2 KTVEIIGYKRANLGKKEAKRLRAEAMVPAVLYGG---DEQIHFYAPMILFRPLVFTAEAH 58 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + ++I + I +D PVS+I++HADFLQ+ +G + +++PV E +PG+ + Sbjct: 59 FVNINIEGDEYQAILQDVAFHPVSEIILHADFLQLHKGKNIKMNIPVHL--EGTAPGVTK 116 Query: 124 GGKLNVVCHEVSLLCPA--NNIPDSITVDLNDLKIGDSIHMEDI 165 GG L + SLL A ++P+ IT+D++ L G SI +E + Sbjct: 117 GGTL--IHKRRSLLVKALPKDMPEHITLDISALDFGKSIKVESV 158 >gi|309801272|ref|ZP_07695401.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] gi|308222161|gb|EFO78444.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] Length = 198 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GKG+AR LR IPA +Y P + L K+ + L N + T+ Sbjct: 7 LEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + I KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ I V+++ L G + +D+ LPE Sbjct: 118 AFVDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPE 160 >gi|297735240|emb|CBI17602.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 16/176 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKN 59 + A+ R GK + RK G++P+I++ + + + I++ I K L Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G E V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKV 229 >gi|195953330|ref|YP_002121620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] gi|226736331|sp|B4U931|RL25_HYDS0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|195932942|gb|ACG57642.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] Length = 197 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 5/172 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + + R+ KG + RK G +P IYG + KD++ + F+ Sbjct: 2 KRVSIELLEREASTKGDKKSKRKEGLVPVEIYGKGVQNIHAYMRIKDLAAMPHGTTFL-- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +G E++ + KD Q + D +H D +S + V VP+ F+ K G++ Sbjct: 60 -IEAKLGNEVLPCLLKDIQYGWLGDNPVHVDLYNISNVTETDVEVPLEFVGTPK--GVEL 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 GG L + H + L NIP+ ITVD++++ +G +H++D+ +P M Sbjct: 117 GGTLEIHLHSIELKVDPRNIPEKITVDISNVDLGGVLHVKDLNIPANCRLME 168 >gi|332877495|ref|ZP_08445242.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684601|gb|EGJ57451.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 197 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 15/175 (8%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK------PIALSAKDISKRLYS 57 KE + R GK +AR +RK +P +YG D P ++ ++ +YS Sbjct: 2 KEINVKGTARAAFGKKAAREIRKANAVPCNLYGEAKDENGAPVALPFTVTNDELRNLIYS 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + L +D GKE I K+ Q PV D ++H DF ++++ + + VP++ Sbjct: 62 PDIYAVNLNID-GKE-CKAILKEIQFHPVKDNVLHVDFYEITDTKPIVMEVPIKL--NGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI-----HMEDIRL 167 + G+K GG+L ++ + NIP+ + +D+ L +G +I H E + L Sbjct: 118 AEGVKAGGRLAASVRKLKVKAVYTNIPERLNIDVTSLGLGKTIKVGELHFEGLEL 172 >gi|116792350|gb|ABK26327.1| unknown [Picea sitchensis] Length = 249 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 18/176 (10%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSA-----KDISKRLYS 57 + A+ R++ G+ A RK+G +P++++ G + + LS + + ++ Sbjct: 41 IQAIPRERTGRFFASKERKSGLVPSVVFEQEENGLAAVRRKRLLSVESDQIRGLVNKVGH 100 Query: 58 KNFMTTILTLDI--GKELVH------VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 + F++ L++ G H V+P+ L P ++ +++ F+ + + + V VP Sbjct: 101 QFFLSRTFELEVVAGPRSSHILEKGRVVPRKVHLRPGTEEILNVVFVWAPKCAKLKVDVP 160 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + F E+ PG+++GG LN + + LCPA+ IP I +DL++L IG+ +H+ DI Sbjct: 161 LVFKGEDVCPGLRKGGYLNTIKKTIGYLCPADLIPPYIDIDLSNLDIGEKLHVRDI 216 >gi|225426106|ref|XP_002272347.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742259|emb|CBI34408.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 16/176 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKN 59 + A+ R GK + RK G++P+I++ + + + I++ I K L Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G E V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKV 229 >gi|186701238|gb|ACC91264.1| 50S ribosomal protein [Capsella rubella] Length = 257 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKNFM 61 AV R GK + RK G++P+II+ + + + +++ I K L F+ Sbjct: 56 AVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIRKLVTHLGYSFFL 115 Query: 62 TTILTLDIGKEL--------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFI 113 + + +++ E+ V +P+ L +D ++ F++ G+ + V +P+ FI Sbjct: 116 SRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFI 175 Query: 114 NENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 176 GDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKV 229 >gi|332298401|ref|YP_004440323.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] gi|332181504|gb|AEE17192.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] Length = 185 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 103/188 (54%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQ ++AV R + GK A+ LR+NG++PA++Y + + + + + +K ++ Sbjct: 1 MDQ--LVVNAVTRTETGKRVAKKLRENGRLPAVMYNSKGEAVMLDIDEVEFTK-VWKSAT 57 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 TT++ L + GK V KD + D +D +HADF + E + V + V ++ N + Sbjct: 58 PTTLVNLKLDGKSDNLVFIKDTEYDIKTDRNLHADFHAIDEKKALKVTMKV-LLSGNPA- 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+++GG L ++++ C N+P +T D++ L +G ++D+ L ++ + +S Sbjct: 116 GVREGGFLTTHQSQITIQCLPKNLPIRVTADISGLGVGQVFRVKDLGLAKEITVLSDPEA 175 Query: 180 TIATIVAP 187 +A++ AP Sbjct: 176 ALASVSAP 183 >gi|145219519|ref|YP_001130228.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris vibrioformis DSM 265] gi|189042365|sp|A4SE17|RL25_PROVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145205683|gb|ABP36726.1| LSU ribosomal protein L25P [Chlorobium phaeovibrioides DSM 265] Length = 203 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 5/174 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K A +RK+G +PA++Y + ++++ +++K +++ L GK Sbjct: 13 IKKNDAEKIRKSGNVPAVVYHKGEETVAVSVNELELNKLVHTAESHIIDLRFPDGKVKRS 72 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 I K Q PV+D +IH DF + + + VPV E S G+ +GGKL ++ H ++ Sbjct: 73 FI-KAVQFHPVTDRIIHTDFQLFAADEVIEMDVPVSVTGE--SVGVDKGGKLQILRHNLT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKTSSMSQLNITIATIVAP 187 L ++PD + +D+ D++IG +H++DI + E M + ++VAP Sbjct: 130 LKGKPTDMPDHLVIDITDMEIGSIVHVKDIPAQSYENLEIMIDPETPVVSVVAP 183 >gi|76789542|ref|YP_328628.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis A/HAR-13] gi|109893354|sp|Q3KKP2|RL25_CHLTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76168072|gb|AAX51080.1| LSU ribosomal protein L25P [Chlamydia trachomatis A/HAR-13] Length = 185 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 6/165 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA++Y I + A+ SK L S +T+ TL + + KD Sbjct: 19 IRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALASTVFTLSYEGREIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q + +IH DF ++ +G V +++P+R+IN G+K GG L V + ++C Sbjct: 79 IQYHVTTYDVIHLDFEELVDGRDVRLNIPIRYINTVDCVGVKLGGSLRQVIRCIRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 +I + +D+ L + ++ + DI +PE +S+ ++ +T+A Sbjct: 139 KDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAVTVA 183 >gi|40219|emb|CAA34524.1| unnamed protein product [Bacillus subtilis] Length = 186 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++ Sbjct: 2 ATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNAVI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL++ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 61 TLEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 119 VLQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|296272451|ref|YP_003655082.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] gi|296096625|gb|ADG92575.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] Length = 178 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K SA+ L+++G I A IYG + A D + Y KN T + Sbjct: 2 LEGIVRDSITKQSAKQLKRDGYILANIYGKGVENINAAFKRNDFVR--YLKNKTTVAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ K+YQ P++ L+H D + G VPV E G+K G Sbjct: 60 KVGDTVCKVVVKEYQKAPITSELLHVDLMMALPGVKTNYLVPVTV--EGTPKGLKNKGLF 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V++ C N+P++ + ++DL GD++ + ++ +PE Sbjct: 118 VFHKKRVAVKCTIENLPENFHIKISDLDTGDNVLVRNLTMPE 159 >gi|332711867|ref|ZP_08431797.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] gi|332349195|gb|EGJ28805.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] Length = 183 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 91/168 (54%), Gaps = 5/168 (2%) Query: 22 RLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH--VIP 78 R LR++G IP ++YG N ++ + ++AK L + + T++ L I + V+ Sbjct: 17 RALRRSGLIPTVLYGHNGAESVSLTMTAKAAEDLLKTASVNNTLIELSIPDISWNGPVLL 76 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 ++ Q P + L H F V+ + V V VP++ + E + G+KQGG L V + C Sbjct: 77 REIQSHPWKNSLYHLSFFSVASQNKVEVVVPLKLVGE--AVGVKQGGILQQRLTTVKVQC 134 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P + IP++I +D+++L+ G +++ ++ LPE M + +++ I + Sbjct: 135 PPDKIPETIDIDISNLEQGKMLYIYELVLPEGIEVMDEPKLSVLAITS 182 >gi|78189123|ref|YP_379461.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium chlorochromatii CaD3] gi|109893352|sp|Q3ARF7|RL25_CHLCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78171322|gb|ABB28418.1| LSU ribosomal protein L25P [Chlorobium chlorochromatii CaD3] Length = 195 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 + K A LRK+G +PA++Y + +++ ++K ++S L GK L Sbjct: 13 IKKNEAEKLRKSGLVPAVVYHKGEETVAVSIQELALTKLVHSAESHIIDLQFPDGK-LKR 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 K+ Q PV+D +IHADF S V + VPV E S G+++GGKL ++ H ++ Sbjct: 72 SFIKEVQFHPVTDRIIHADFQLFSADEIVEMVVPVSVSGE--SVGVEKGGKLQIIMHSLT 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 L ++P+ +D+ L + SIH+ +I Sbjct: 130 LKGKPTDMPEHFVIDITALDLAHSIHVREI 159 >gi|16077120|ref|NP_387933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221307862|ref|ZP_03589709.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221312184|ref|ZP_03593989.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317117|ref|ZP_03598411.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. JH642] gi|221321380|ref|ZP_03602674.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. SMY] gi|321313722|ref|YP_004206009.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] gi|585017|sp|P14194|CTC_BACSU RecName: Full=General stress protein CTC; AltName: Full=50S ribosomal protein L25 gi|467441|dbj|BAA05287.1| expressed at the end of exponential growyh under condtions in which the enzymes of the TCA cycle are repressed [Bacillus subtilis] gi|2632319|emb|CAB11828.1| ribosomal protein Ctc, binding 5S RNA [Bacillus subtilis subsp. subtilis str. 168] gi|291482424|dbj|BAI83499.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. natto BEST195] gi|320019996|gb|ADV94982.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] Length = 204 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++ Sbjct: 2 ATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNAVI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL++ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 61 TLEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 119 VLQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASIL 178 Query: 186 AP 187 P Sbjct: 179 PP 180 >gi|118473057|ref|YP_889670.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium smegmatis str. MC2 155] gi|118174344|gb|ABK75240.1| ribosomal protein L25, Ctc-form [Mycobacterium smegmatis str. MC2 155] Length = 215 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 6/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R++G++PA++YG+ +DP+ + L+A+D + L S ILT Sbjct: 10 KLTANVRTRTGKGASRQARRDGKVPAVLYGHGTDPQHLELNARDFAAVLRSHG-TNAILT 68 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K + P+ + HAD L V G VTV V V + +PG Sbjct: 69 LDIEGTEQLALTKALDVHPIRRNIQHADLLVVQRGEKVTVEVTVLVEGD-ATPGTLVTQD 127 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N + E L IP+ +TV + ++ G I I LPE + +S + + +V Sbjct: 128 ANTIEIEAEALS----IPEQLTVSVEGVEAGTQITAGQISLPEGVNLISDPELLVVNVV 182 >gi|315636066|ref|ZP_07891323.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] gi|315479635|gb|EFU70311.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] Length = 178 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L +K T + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLRNKE--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + K G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVGTAK--GLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V + + N+P+ I +D+ +L GD+I + DI+ PE Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFPE 159 >gi|297243447|ref|ZP_06927379.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] gi|296888492|gb|EFH27232.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] Length = 208 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + GKG AR LR IPA +Y ++P + L ++ + L N + T+ Sbjct: 7 LEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN---ALFTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G+E + KD Q +PV I+ H DF +V G + V VPV F+ G +G + Sbjct: 64 KFGEESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPV-FVE-----GTPKGAAV 117 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V E+ + N+P+ + V+++ L G + +D++LP+ Sbjct: 118 AFVDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPQ 160 >gi|327403219|ref|YP_004344057.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] gi|327318727|gb|AEA43219.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] Length = 194 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 88/162 (54%), Gaps = 5/162 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +LS R VGK A+ LR G +P ++YG + +L + K +++ + Sbjct: 2 KVAQLSGSPRANVGKKDAKALRDAGLVPCVLYGQGTQTH-FSLPDIKVEKLIFNPDVFK- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + + I ++ Q +P++D ++H DFL++ V V +PVR ++ G+ Sbjct: 60 -IELDIDGKKSNAIIQEIQQNPITDKVVHIDFLELDAKKPVKVALPVRLTGASR--GVLA 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 GG+L V + ++ ++P++I +D+ L+IG S+ ++D+ Sbjct: 117 GGRLMQVFRRLRVVGLPADLPEAIVIDITKLRIGQSVRVKDL 158 >gi|298372822|ref|ZP_06982812.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] gi|298275726|gb|EFI17277.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] Length = 221 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD------------- 50 K +L R ++GK + + LR G IPA++YG+ S P + +D Sbjct: 2 KTFQLEGKPRKEIGKKAVKALRGEGLIPAVLYGHRSVELPYSGKLEDGQVLVENQGKGVV 61 Query: 51 ----------ISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSE 100 + K +YS I+ L+IG + KD QL PV+D ++H DFL V Sbjct: 62 VTNFTVTTDAVRKLIYSPEVF--IVELNIGGHKQTAMLKDLQLHPVTDEILHIDFLAVFP 119 Query: 101 GSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 +T+ VPV + + + G++ GGKLN++ ++ + + +IP+ + +++ +L++G +I Sbjct: 120 DIPMTIEVPV--VLDGFAAGVRAGGKLNLISKKLKVKGLSKDIPEKLHINVENLELGKAI 177 Query: 161 HMEDIRL 167 ++ + Sbjct: 178 QIKHLNF 184 >gi|309812815|ref|ZP_07706553.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] gi|308433232|gb|EFP57126.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] Length = 283 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 12/184 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R + GKG+AR +R+N IPA++YG+ P + L D + + N + TI Sbjct: 63 LEAQLRTEFGKGAARRIRRNDMIPAVLYGHGETPVHLELPGHDTMMAVKNPNALLTI-RF 121 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI--KQGG 125 D +EL + +D Q + + + H D + V +G V V VPV E + + + G Sbjct: 122 DGKEEL--ALARDVQREVIRRFIEHVDLVIVKKGEKVEVDVPVHAEGEAAAETVVTTENG 179 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V L PA +IP++ TV + + G I +D+ LP +S + + + Sbjct: 180 MLTV-------LTPATDIPEAFTVSVEGAEAGTQILAKDVTLPSGVELVSDEEMLVINVT 232 Query: 186 APIS 189 IS Sbjct: 233 EQIS 236 >gi|237713464|ref|ZP_04543945.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262407250|ref|ZP_06083798.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|293370794|ref|ZP_06617340.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|294644676|ref|ZP_06722426.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294809063|ref|ZP_06767785.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|298482671|ref|ZP_07000855.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] gi|229446446|gb|EEO52237.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262354058|gb|EEZ03150.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|292634154|gb|EFF52697.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|292640010|gb|EFF58278.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294443788|gb|EFG12533.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|295087142|emb|CBK68665.1| LSU ribosomal protein L25P [Bacteroides xylanisolvens XB1A] gi|298271134|gb|EFI12711.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] Length = 196 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 81/144 (56%), Gaps = 5/144 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RKNG +P ++YG ++ ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRKNGGVPCVLYGG-NEVVHFTVTNEGLRNLVYTPHIYVVDLIID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+ +TV+++ L +G ++ + ++ Sbjct: 142 PEKLTVNVSHLGLGKTVKVGELSF 165 >gi|187251696|ref|YP_001876178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] gi|254801048|sp|B2KE95|RL25_ELUMP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186971856|gb|ACC98841.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] Length = 219 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 4/165 (2%) Query: 4 KECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E K++ +R+K G KG +R ++PA+IYG +P ++++ KD+ L + + Sbjct: 2 EEIKVNVELREKAGVKGVLSAIRAEKKVPAVIYGGQKEPISVSITEKDLKAILKAGSNSV 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L+ GKE I K+ Q V D H DF ++S + V VP++ E+ I Sbjct: 62 VTLSTPAGKET--AIIKEVQYHVVKDTPNHVDFQRISLKEKIDVVVPLKLTGESADVKI- 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G +N V EV++ IP I VD++ L I +IH+ D+ L Sbjct: 119 YGALINQVLREVAIRALPTAIPHEIAVDISALTIHKAIHISDLSL 163 >gi|317507883|ref|ZP_07965581.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] gi|316253812|gb|EFV13184.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] Length = 207 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 12/170 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A +R + GKG++R R++GQ+PA++YG+ ++PK L AK+ + R+ N ++ Sbjct: 5 ARVEATVRTEFGKGASRRARRDGQVPAVLYGHGAEPKHFNLPAKEFA-RVLRANGTNAVV 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L G E I K + P L H D V G + V VPV + S G+ Q Sbjct: 64 SLTAGGEEHLAITKLVVVHPTKSYLQHIDLQIVRRGERIAVEVPVVVVGTPISGGVLQ-- 121 Query: 126 KLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 HE ++L A +IP+ I V ++ L+IG I ++ LP+ S Sbjct: 122 ------HEATVLPVEAEALHIPEQIEVSIDGLEIGSKILAGELELPQGVS 165 >gi|253681263|ref|ZP_04862061.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253562501|gb|EES91952.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 192 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 4/162 (2%) Query: 24 LRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQ 82 LR+NGQ+P I+YG ++ PI ++ + R+ N +IL L + E+ + + K+ Q Sbjct: 20 LRRNGQVPCIMYGEHLEKAVPIKVNYNQLM-RILKNNSKGSILKLQLNNEIKNCVIKEIQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 D V+ +IH DF VS+ + + +P+ F NK + L E+ + Sbjct: 79 QDIVTGKVIHVDFQNVSKDEIIKMTIPIEFTGINKLQSKRL--ILETFITEIDMQGKVQE 136 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 IP++I +D + L G+ + + DI+LPE +S N +A + Sbjct: 137 IPEAIKIDASKLDFGNKLFVHDIKLPEGIRLLSDPNALVAVV 178 >gi|312138688|ref|YP_004006024.1| 50S ribosomal protein l25 rply [Rhodococcus equi 103S] gi|325676243|ref|ZP_08155922.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] gi|311888027|emb|CBH47339.1| 50S ribosomal protein L25 RplY [Rhodococcus equi 103S] gi|325552804|gb|EGD22487.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] Length = 197 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A +R + GKG+AR R++GQ+PA++YG+ +DP+ + L A++ + L + ++ Sbjct: 6 KLVASVRSEFGKGAARRARRDGQVPAVLYGHGTDPQHLNLPAREFAAILRAHG-TNVVIN 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V +G V V VP+ + +PG + Sbjct: 65 LDIDGKDQLALTKSVVVHPIRRHIEHADLLIVQKGEKVAVEVPI-VVTGTAAPGALVTEE 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + EV L +IP+S+ + + ++G + LP+ + + + +V Sbjct: 124 TTTIKLEVDAL----DIPESVEISVEGAEVGTQFLAGAVALPKGATLADDAELLLVNVV 178 >gi|150387891|ref|YP_001317940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947753|gb|ABR46281.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 204 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L + +R++ G ++ R G +PA+IYG + + + ++ + ++ ++ + Sbjct: 6 LVSSLRNETGSNASHRSRDLGNVPAVIYGKSINTLTVEIERTEVEAFVRNQG-GKGLVQV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + K+ Q DPV+ +++H DF QV++ + VP+ K G + G + Sbjct: 65 NVGGQPYTTFVKEMQRDPVTGMIMHVDFQQVNQDEQIHTMVPIIL----KGRGFVEKGGV 120 Query: 128 NVV--CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V E+ + C A +IP+ D+++ + GD++ + D+ E+ S ++ L IA+I Sbjct: 121 TVQQQVRELEVQCFAGSIPEKFEFDISNFRPGDTLKVSDVEFGEEVSIINNLESVIASIA 180 Query: 186 AP 187 P Sbjct: 181 TP 182 >gi|223889310|ref|ZP_03623897.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] gi|223885231|gb|EEF56334.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] Length = 163 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR +R +IPA++YG D + + + + +K+ ++K T+L LD GK V KD Sbjct: 1 ARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLILDDGKLERCVFVKD 59 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 + S ++ H DF +V + +VP++ I S G+K+GG L V+ +V + Sbjct: 60 VAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGILTVLKEQVKVRSLP 117 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++P+ I +DL + GDS+ ++D+ LP Sbjct: 118 LDLPEFIELDLTPVNKGDSVLLKDLVLP 145 >gi|242033675|ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] gi|241918086|gb|EER91230.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] Length = 240 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 17/175 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-------GN-MSDPKPIALSAKDISKRL-YSK 58 + AV R+ G +A R++G++PA++ GN ++ + + + +++ L S Sbjct: 36 IQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRQLLTADRRQLAEMLKQSP 95 Query: 59 NFMTTILTLDI-----GKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++T + L + +VH V+P D S +++ ++ EG+ + V +PV Sbjct: 96 YFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDETSGNILNLVMVKADEGTMLKVDLPV 155 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI Sbjct: 156 EFKGEDTCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDI 210 >gi|288817436|ref|YP_003431783.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|288786835|dbj|BAI68582.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|308751043|gb|ADO44526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobacter thermophilus TK-6] Length = 192 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 5/182 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ L + R+ K + +R+ G IP +YG + + +S KD+ + + F+ Sbjct: 2 RKVSLKLIPRELGKKSEIKRMRREGYIPVEVYGKDVENRHAYVSLKDLMSLPHGETFL-- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + D+ E + KD Q+ + D +H D +S + + VP+ F+ G+ Sbjct: 60 -IEADVDGEKRVCLLKDIQVGYLGDDPVHVDLYDISHTKEIEIEVPLEFVG--TPAGVGL 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG V+ H +++ ++IPD ITVD++ + +GD +H+ DI P M IA Sbjct: 117 GGTFEVMMHTLTVKASVDSIPDKITVDVSAMNVGDVLHVRDITPPSGCVIMDSPEEVIAV 176 Query: 184 IV 185 ++ Sbjct: 177 VL 178 >gi|297565117|ref|YP_003684089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] gi|296849566|gb|ADH62581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] Length = 205 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 10/184 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTT 63 E +L A R+ + LR +G++P I+Y M++ + L D +++ + + Sbjct: 2 EYRLKAYHRES---ENPERLRDSGKLPGILYNKQMNEKVYVDLGEFD---KVFRQASIHH 55 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++TL++ + V+ + LD H DF +S+ V ++VP++F+ + G++ Sbjct: 56 VITLELDGKTQDVLVRQVNLDKRKRRPSHVDFYALSD-EPVAMYVPLKFVGTPQ--GVRL 112 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG ++ V ++ + NIPD I VD++ L IGDS+H+ D++LP + + T+ T Sbjct: 113 GGVMDTVLRDIEVKVSPRNIPDFIEVDVSGLGIGDSLHLSDLKLPPGVKLNMKGDSTVVT 172 Query: 184 IVAP 187 IV P Sbjct: 173 IVPP 176 >gi|154249290|ref|YP_001410115.1| 50S ribosomal protein L25/general stress protein Ctc [Fervidobacterium nodosum Rt17-B1] gi|189042356|sp|A7HKM5|RL25_FERNB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154153226|gb|ABS60458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fervidobacterium nodosum Rt17-B1] Length = 219 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 102/192 (53%), Gaps = 13/192 (6%) Query: 5 ECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 E +SA +R VG K + R LR G IPA+ YG + P + L+ D K ++ + Sbjct: 2 EHVVSAQLRSIVGNKRAVRRLRATGAIPAVAYGPGLEKPLSLVLNKTDFLK-IFKHITES 60 Query: 63 TILTLDIGKE-----LVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 T LTL + E L H+ K Q D V+D + H DF + ++VP+ + Sbjct: 61 TPLTLVVKDENDKEVLKHLAFIKMVQYDKVTDEVKHVDFYVPEAHHKMRINVPIEIVG-- 118 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMS 175 K+ G+++GG + ++ HEV + + +P+ I +D+ +L++G+++ ++D+ LPE M Sbjct: 119 KAIGVEKGGIMEIIHHEVPVKALPDRVPEVIKIDVTNLELGETLRVKDVVLPEGVEIDMD 178 Query: 176 QLNITIATIVAP 187 ++ I T+V P Sbjct: 179 DEDVLI-TVVVP 189 >gi|257068516|ref|YP_003154771.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] gi|256559334|gb|ACU85181.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] Length = 203 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+ +R+ GKG++R LR ++PA++YG+ P ++L D + + N + + Sbjct: 4 KLNVELREDFGKGASRRLRAENRVPAVLYGHGEAPLHLSLPGHDTALAARNPNALLELAL 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D K L + K+ Q P+ L H D + V +G V V +PV E +P + Sbjct: 64 SDGTKHLALI--KEIQRHPLKRSLNHLDLITVRKGEKVEVEIPVILTGEPVAPAVA---- 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V ++L A N+P+ + + + D + G + D+ LPE + ++ I + ++ Sbjct: 118 -FVDLQTLTLSVDALNVPEQVEISVEDTEDGYQLFAGDVTLPEDSELVTDAEILVVSVAV 176 Query: 187 P 187 P Sbjct: 177 P 177 >gi|300790048|ref|YP_003770339.1| 50S ribosomal protein L25 [Amycolatopsis mediterranei U32] gi|299799562|gb|ADJ49937.1| large subunit ribosomal protein L25 [Amycolatopsis mediterranei U32] Length = 199 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + + R+ +N + Sbjct: 3 EVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFA-RVVRENGSNAV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLD+ + + K + P+ + + H D L V G + V VPV N P G Sbjct: 62 ITLDLEGSVELALTKTIVVHPLKNYIEHVDLLVVKRGEKIVVDVPVVVTG-NPGP----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 G +N + + A +IP+ V + L+IG + + LP+ + Sbjct: 117 GLVNQDVDTLQVEVEALHIPEQFEVSIEGLEIGSQVLAGQVELPQGAT 164 >gi|255526076|ref|ZP_05392999.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296187125|ref|ZP_06855523.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255510262|gb|EET86579.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296048319|gb|EFG87755.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 202 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L R+K AR RK+G+IP IIYG + + +++K++ S +L Sbjct: 3 ELELHKRNKNTVHEARKERKSGKIPGIIYGKNINNLMFEIGELELNKKISSTG-EHGVLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN---KSPGIKQ 123 +++G E + ++ Q +PV+ +IH D ++ + + VP+ F+ E+ + G+ Q Sbjct: 62 VELGSEKHSTLIREVQRNPVNHKIIHIDLEEIPKNQAIQTDVPILFMGEDFVSRKGGVVQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + NV + C IP I VD++ L+IGDS + DI L ++ + + LN IA Sbjct: 122 KERTNV-----KVQCKYEYIPKHIDVDVSKLEIGDSYRVADIELSQEITFIDDLNTLIAF 176 Query: 184 I 184 + Sbjct: 177 V 177 >gi|29349997|ref|NP_813500.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides thetaiotaomicron VPI-5482] gi|253572757|ref|ZP_04850157.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298384351|ref|ZP_06993911.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] gi|71153118|sp|Q89YZ1|RL25_BACTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29341908|gb|AAO79694.1| putative 50S ribosomal protein L25 [Bacteroides thetaiotaomicron VPI-5482] gi|251837657|gb|EES65748.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298262630|gb|EFI05494.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] Length = 196 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 5/144 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RKNG +P ++YG + ++ + + +Y+ + ++ LDI + V+ I KD Q Sbjct: 27 IRKNGGVPCVLYG-AGEVVHFTVTNEGLRNLVYTPHIY--VVDLDIDGKKVNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDNILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+ +TV+++ L +G ++ + ++ Sbjct: 142 PEKLTVNVSHLGLGKTVKVGELSF 165 >gi|15612454|ref|NP_224107.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori J99] gi|7674253|sp|Q9ZJC4|RL25_HELPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4156009|gb|AAD06970.1| putative ribosomal protein L25 [Helicobacter pylori J99] Length = 178 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGVENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|222824358|ref|YP_002575932.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] gi|254801040|sp|B9KDP2|RL25_CAMLR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222539579|gb|ACM64680.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] Length = 178 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKINEFIKEVRKKT--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++++V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGGKVLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIVGT--AMGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + + C A N+P+ +D+ L +GD++ + D+ +PE Sbjct: 118 IQSKRRLKVKCAAENLPNYFELDVTKLDVGDALLVRDVVVPE 159 >gi|212703171|ref|ZP_03311299.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] gi|212673437|gb|EEB33920.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] Length = 196 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 9/187 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-KRLYSKNFMTT 63 E LS R+ GKG A R IP + Y D IA+ A + +++Y++ T Sbjct: 4 EKTLSVQKREGSGKGPAGRARTQDMIPGVFYTAKGDN--IAVQAPALPLEKMYTEMGRTA 61 Query: 64 ILTLDI---GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L+I G + VH V+ + Q P H DF V V V VP+ F+ + Sbjct: 62 VFNLEIDDNGTKTVHPVMFWEVQKHPYKKAFTHVDFYGVDLDKEVKVDVPIEFVGVAR-- 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K GG + V L ++P +T+++ D+ I DS+ +E + LPE ++ N Sbjct: 120 GVKLGGVMETYRESVRLCSKPLDMPKKVTINVTDMGINDSVTVETLTLPENVKAVFDKNF 179 Query: 180 TIATIVA 186 I ++ + Sbjct: 180 AIVSVFS 186 >gi|37519968|ref|NP_923345.1| 50S ribosomal protein L25/general stress protein Ctc [Gloeobacter violaceus PCC 7421] gi|68053196|sp|Q7NNL2|RL25_GLOVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|35210960|dbj|BAC88340.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421] Length = 211 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIAL-----SAKDISKRLYSKNFMTTILT 66 ++ + R +R+ G+IPA++YG+ + +AL +A+D+ KR+ N TIL Sbjct: 7 LKQRATGAQPRAMRREGRIPAVLYGHRGT-QSLALELEQRTAEDLLKRVTINN---TILP 62 Query: 67 LDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L + + V+ ++ Q D V L+H F V+ ++T+ +P+ F E + G+K G Sbjct: 63 LKVERGWSGDVLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPLVFTGE--AVGVKMDG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G L V ++++ P ++P++I VD++ +++GD ++++D+ LP Sbjct: 121 GLLEKVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLP 164 >gi|166364701|ref|YP_001656974.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] gi|189042362|sp|B0JXF5|RL25_MICAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166087074|dbj|BAG01782.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] Length = 185 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 13/172 (7%) Query: 22 RLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 R LR+ G IPA++YG N ++ + + K L + T++ +++ GK L+ Sbjct: 17 RALRRQGLIPAVLYGHNGTESISLVVGEKAALTLLKKASVNNTLVDVNVPEMPWTGKALI 76 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 ++ Q P L H F VS + + VP++ I E + G KQGG + +EV Sbjct: 77 ----QEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAIGE--AIGTKQGGLIEQFVNEV 130 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 ++ C A+NIP+ I D++++ +G S+ + D+++PE + + T+ IVA Sbjct: 131 NVSCIADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTLKDDPHTTVFAIVA 182 >gi|237751112|ref|ZP_04581592.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] gi|229373557|gb|EEO23948.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] Length = 178 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 8/163 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +RD +GK +A+ L+++G + A IYG + A D K + +K T I + Sbjct: 2 LEGKLRDSIGKTNAKALKRDGYLVANIYGKGKENIHCAFKRNDFIKYMRAKQ--TLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 I + V+ ++YQ DPV+ ++H D + ++G VPV+ SP G+K G Sbjct: 60 KIDGNVYDVVVQEYQKDPVTSDILHVDMMFATKGCVAKYKVPVKVTG---SPIGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L V++ C A +P+ T+D++ L +G +I + D LPE Sbjct: 117 LVFSRKRVAVKCDAAVLPNDYTLDVSGLDVGHAILVRD--LPE 157 >gi|330887871|gb|EGH20532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 143 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 78/129 (60%), Gaps = 5/129 (3%) Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE ++P + Sbjct: 1 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNE-EAP-V 58 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P E + + Sbjct: 59 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 118 Query: 179 ITIATIVAP 187 + IA + AP Sbjct: 119 LAIANVHAP 127 >gi|317011631|gb|ADU85378.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SouthAfrica7] Length = 178 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|166154141|ref|YP_001654259.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 434/Bu] gi|166155016|ref|YP_001653271.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335381|ref|ZP_07223625.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2tet1] gi|226736297|sp|B0B926|RL25_CHLT2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736299|sp|B0BAQ5|RL25_CHLTB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|165930129|emb|CAP03613.1| LSU ribosomal protein L25 [Chlamydia trachomatis 434/Bu] gi|165931004|emb|CAP06567.1| LSU ribosomal protein L25 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 185 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA++Y I + A+ SK L S +T+ TL + + KD Sbjct: 19 IRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALASTVFTLSYEGREIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q + +IH DF ++ +G V ++VP+R IN G+K GG L V + ++C Sbjct: 79 IQYHVTTYDVIHLDFEELVDGRDVRLNVPIRCINTVDCVGVKLGGSLRQVIRCIRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 +I + +D+ L + ++ + DI +PE +S+ ++ +T+A Sbjct: 139 KDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAVTVA 183 >gi|262201499|ref|YP_003272707.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] gi|262084846|gb|ACY20814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] Length = 210 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 6/175 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL+ R + GKG+AR R+ G++PA++YG+ +DP+ ++L A++++ L + N Sbjct: 1 MATETTKLAVTTRTEKGKGAARRARREGKVPAVLYGHRTDPQHLSLPARELAAILRA-NG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ LDI + K + P+ + + H D L + G VTV V + + +PG Sbjct: 60 TNAIIDLDIEGTSQLALTKQIDVHPIRNYIEHVDLLVIRRGEKVTVEVTIVVEG-DAAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +VV E L +IP+ ITV + G S+H D+ LP+ S +S Sbjct: 119 TLVVQDASVVEIEADAL----SIPEQITVSVEGTAAGVSVHAADLDLPQGVSLVS 169 >gi|153807759|ref|ZP_01960427.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] gi|149129368|gb|EDM20582.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] Length = 196 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 80/144 (55%), Gaps = 5/144 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RKNG +P ++YG ++ + + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRKNGGVPCVLYGG-NEVVHFTVPNEGLRNLVYTPHIYVVDLIID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+ +TV+++ L +G ++ + ++ Sbjct: 142 PEKLTVNVSHLGLGKTVKVGELSF 165 >gi|94984577|ref|YP_603941.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus geothermalis DSM 11300] gi|166223677|sp|Q1J162|RL25_DEIGD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94554858|gb|ABF44772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Deinococcus geothermalis DSM 11300] Length = 241 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPV 86 G IPA+ Y N A+ K R + + T + + I G E + K Q+D Sbjct: 17 GMIPAVAY-NKEKNVTFAIERKAFD-RAFRQQGTTGLFDIVIEGGETFPALVKAVQMDKR 74 Query: 87 SDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIPD 145 IHADF V+ G V V VPV KS G QGG ++VV H ++++ P IP Sbjct: 75 RREAIHADFYMVTYGEPVEVSVPVH--TTGKSQGEIQGGLVDVVVHSLNVIAPGPRRIPQ 132 Query: 146 SITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 ITVD+ +L IGD + I+LPE + ++ + +++ P Sbjct: 133 EITVDVTNLNIGDHVTAGQIKLPEGVKLAVEPDLVVLSVLPP 174 >gi|303246471|ref|ZP_07332750.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] gi|302492181|gb|EFL52056.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] Length = 207 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 7/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R +GKG+ R LR +P I Y P+ + + K LY+K + Sbjct: 2 KETLSLAVTTRTGLGKGANRKLRAKDMVPGIYYDATGANVPVMVEHLPLQK-LYAKTASS 60 Query: 63 TILTL----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L D G+E + + P + H DF V + VH+PV + K+ Sbjct: 61 HVFDLKIATDAGEETKPSLMWKVEHHPTKPRITHVDFYGVDLTKAIHVHIPV--VVTGKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G +GG L V + ++C IPD + +D+ +L + +S+ + D+ LPE ++ + N Sbjct: 119 KGQVKGGALEVYRESIEVVCLPLAIPDRVVIDITNLDVNESVQVADLVLPEGVKAVYEDN 178 Query: 179 ITIATIV 185 ++ +V Sbjct: 179 FSLLAVV 185 >gi|317179673|dbj|BAJ57461.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F30] gi|332674266|gb|AEE71083.1| 50S ribosomal protein L25 [Helicobacter pylori 83] Length = 178 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|297624374|ref|YP_003705808.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] gi|297165554|gb|ADI15265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] Length = 208 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 6/164 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++P ++Y N P+++ ++ K S+ + +++ L + E V+ K Q+ Sbjct: 16 LRAQGRLPGVVY-NKELNIPVSVELREFDKAFRSQG-VASLINLQLDGESHDVLVKAVQM 73 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D +H DF V+ G V V VP+ F+ + G ++GG+++ H+V + I Sbjct: 74 DKRRREPLHVDFYAVTAGQPVDVFVPINFVG--TAIGAREGGQVDAQRHQVHIRILPRLI 131 Query: 144 PDSITVDLNDLKIGDSIHMEDI--RLPEKTSSMSQLNITIATIV 185 P+ I VD++ L I DS+H++D+ LP + + L T+ TI+ Sbjct: 132 PNHIDVDVSALAINDSLHLKDVLSALPSEAEVLDDLEETLITIL 175 >gi|311746128|ref|ZP_07719913.1| ribosomal protein L25 [Algoriphagus sp. PR1] gi|126576349|gb|EAZ80627.1| ribosomal protein L25 [Algoriphagus sp. PR1] Length = 196 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 4/164 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R +G +P ++YG P+ I A I R ++ L+I +V + K+ Q Sbjct: 22 IRDSGNVPCVVYGP-GIPEQIHFYAPAILFRDLIYTPEVHVVELNIEGTIVKAVLKEAQF 80 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVS++L+HADF+ + + +PV+ SPG+ +GGKL + + A ++ Sbjct: 81 HPVSEVLLHADFMAFTNDKPIKFEIPVKV--SGSSPGLAKGGKLEFKTRSLKVKGLAGDL 138 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 PD I D++ L +G S + +++ E ++ N+++ TI P Sbjct: 139 PDYIEADISKLDLGKSFKVSELK-AEGFEILTSPNVSLVTIGIP 181 >gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] gi|227235227|gb|EEI85242.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] Length = 216 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 9/174 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ GK + +RKN IP +IY + + +A+D K L +TI+TL Sbjct: 6 LQAEKREATGKNQVKKIRKNELIPGVIYAKNQENVNVQFTARDFEKVLRQAG-TSTIITL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI E V+ K++ P + +H DF + + + V VPV +N + + G L Sbjct: 65 DINGEGKEVLIKEFASHPYKNQFLHVDFQAIDQNQPIRVTVPVVLLNRDDMNEV--NGVL 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 V + C IP + +D+ +L+IGD+ + D+ + S NITI Sbjct: 123 VQNLENVEVECLPKYIPQTAEIDVKELQIGDNKTVADLDIA------SNENITI 170 >gi|257459024|ref|ZP_05624143.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] gi|257443409|gb|EEV18533.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] Length = 178 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 4/165 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD +GK +++ L+++G + A IY D A D K + +K + + Sbjct: 2 LEGIVRDSIGKRASKSLKRDGYLIANIYAKGFDNINAAFKVNDFIKAMRAKEDLP--FEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + VI ++YQ PV++ L H D V + VPV+ K G+K G L Sbjct: 60 SVGGKTYRVIVQEYQKHPVTNTLTHVDLRVVQDDVVSKYLVPVKVTGVAK--GLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 +++ C ++P+ T+D++DL +GDS+ + DI + E S Sbjct: 118 VQSKRRIAVKCAGKDLPNDFTLDVSDLDVGDSLLIRDIPVKEGVS 162 >gi|109948223|ref|YP_665451.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter acinonychis str. Sheeba] gi|123066070|sp|Q17V74|RL25_HELAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109715444|emb|CAK00452.1| 50S ribosomal protein L25 [Helicobacter acinonychis str. Sheeba] Length = 178 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVSCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV++ + G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVKY--QGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|255692808|ref|ZP_05416483.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] gi|260621437|gb|EEX44308.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] Length = 196 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 80/142 (56%), Gaps = 5/142 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RKNG +P ++YG ++ ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 MRKNGGVPCVLYGG-NEVVHFTVTNEGLRNLVYTPHIYVVDLVID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ + ++++ L +G +I + ++ Sbjct: 142 PEKLIINVSHLGLGKTIKVGEL 163 >gi|261838770|gb|ACX98536.1| ribosomal protein L25 [Helicobacter pylori 51] Length = 178 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|168186990|ref|ZP_02621625.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169295085|gb|EDS77218.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 194 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 20 SARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +A +R+NGQ+P I+YG ++ PI ++ ++ K L KN +IL L++ E+ + + Sbjct: 16 TANKIRRNGQVPCIMYGEHLEKAIPIKVNYNELMK-LLRKNSKGSILKLELNNEIRNCVI 74 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK--QGGK--LNVVCHEV 134 K+ Q D +S +IH DF V++ + + +P+ F+ GI Q K L E+ Sbjct: 75 KEIQNDTLSGKIIHVDFQNVNKNEVIKMTIPIDFV------GIDNLQLRKLILETFITEI 128 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISGS 191 + IP++I +D + + D I + DI+LPE +S+ + +A + + S S Sbjct: 129 EMQGKVEEIPENIVIDASTMNCDDKIFVRDIKLPEGIRLLSEPDALVAVVNSTESTS 185 >gi|15605533|ref|NP_220319.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D/UW-3/CX] gi|237803230|ref|YP_002888424.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/Jali20/OT] gi|237805151|ref|YP_002889305.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/TZ1A828/OT] gi|255311635|ref|ZP_05354205.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276] gi|255317936|ref|ZP_05359182.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276s] gi|255349199|ref|ZP_05381206.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70] gi|255503736|ref|ZP_05382126.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70s] gi|255507417|ref|ZP_05383056.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D(s)2923] gi|7674229|sp|O84805|RL25_CHLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3329265|gb|AAC68394.1| General Stress Protein [Chlamydia trachomatis D/UW-3/CX] gi|231273451|emb|CAX10366.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274464|emb|CAX11259.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/Jali20/OT] gi|289525844|emb|CBJ15325.1| LSU ribosomal protein L25 [Chlamydia trachomatis Sweden2] gi|296435426|gb|ADH17604.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/150] gi|296436350|gb|ADH18524.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9768] gi|296437281|gb|ADH19451.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11222] gi|296438209|gb|ADH20370.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11074] gi|296439143|gb|ADH21296.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/11023] gi|297140710|gb|ADH97468.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9301] gi|297748927|gb|ADI51473.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-EC] gi|297749807|gb|ADI52485.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-LC] Length = 185 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA++Y I + A+ SK L S +T+ TL + + KD Sbjct: 19 IRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALASTVFTLSYEGREIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q + +IH DF ++ +G V +++P+R IN G+K GG L V + ++C Sbjct: 79 IQYHVTTYDVIHLDFEELVDGRDVRLNIPIRCINTVDCVGVKLGGSLRQVIRCIRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 +I + +D+ L + ++ + DI +PE +S+ ++ +T+A Sbjct: 139 KDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAVTVA 183 >gi|108709804|gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 239 Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG--------NMSDPKPIALSAKDISKRL-YSK 58 + A+ R+ G +A R++G++PA++ ++ K + K + + L S Sbjct: 38 IQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSP 97 Query: 59 NFMTTILTLDI-----GKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++T + L + +VH V+P D + +++ ++ EG+ + V++PV Sbjct: 98 YFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLPV 157 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI Sbjct: 158 EFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDI 212 >gi|218193303|gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group] Length = 239 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG--------NMSDPKPIALSAKDISKRL-YSK 58 + A+ R+ G +A R++G++PA++ ++ K + K + + L S Sbjct: 38 IQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSP 97 Query: 59 NFMTTILTLDI-----GKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++T + L + +VH V+P D + +++ ++ EG+ + V++PV Sbjct: 98 YFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLPV 157 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI Sbjct: 158 EFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDI 212 >gi|208435364|ref|YP_002267030.1| ribosomal protein L25 [Helicobacter pylori G27] gi|226736329|sp|B5Z9B5|RL25_HELPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|208433293|gb|ACI28164.1| ribosomal protein L25 [Helicobacter pylori G27] gi|307638152|gb|ADN80602.1| LSU ribosomal protein L25p [Helicobacter pylori 908] gi|325996751|gb|ADZ52156.1| 50S ribosomal protein L25 [Helicobacter pylori 2018] gi|325998346|gb|ADZ50554.1| 50S ribosomal protein L25 [Helicobacter pylori 2017] Length = 178 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|157736889|ref|YP_001489572.1| 50S ribosomal protein L25/general stress protein Ctc [Arcobacter butzleri RM4018] gi|166987889|sp|A8ESH9|RL25_ARCB4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157698743|gb|ABV66903.1| 50S ribosomal protein L25 [Arcobacter butzleri RM4018] Length = 178 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L +K T + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLRNKE--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + K G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVGTAK--GLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V + + N+P+ I +D+ +L GD+I + DI+ P Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFP 158 >gi|225470469|ref|XP_002263685.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 251 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 29/212 (13%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNM-----SDPKPIALSAKDISKRL 55 + A+ R+ G + R G+IPA+++ GNM S + + K I L Sbjct: 36 IQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNMNGRSVSRKRLLTTERKQIQAIL 95 Query: 56 YS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 S + +T L I E V+P D + +++ F EGS + Sbjct: 96 KSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWADEGSEL 155 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD I M D Sbjct: 156 KVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHD 215 Query: 165 I------RLPEKTSSMSQLNITIATIVAPISG 190 + +L K +M I A + SG Sbjct: 216 VEVHPSLKLLSKNETMPVCKIVAAKLERAESG 247 >gi|160887365|ref|ZP_02068368.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|237722654|ref|ZP_04553135.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|299148941|ref|ZP_07042003.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] gi|156107776|gb|EDO09521.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|229448464|gb|EEO54255.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|298513702|gb|EFI37589.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] Length = 196 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 5/144 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RKNG +P ++YG ++ ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRKNGGVPCVLYGG-NEVVHFTVTNEGLRNLVYTPHIYVVDLVID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+ + V+++ L +G ++ + ++ Sbjct: 142 PEKLIVNVSHLGLGKTVKVGELSF 165 >gi|317010130|gb|ADU80710.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori India7] Length = 178 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVI 175 >gi|57168447|ref|ZP_00367581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|305432866|ref|ZP_07402024.1| 50S ribosomal protein L25 [Campylobacter coli JV20] gi|57020255|gb|EAL56929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|304444020|gb|EFM36675.1| 50S ribosomal protein L25 [Campylobacter coli JV20] Length = 178 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K T + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNDFIKEVRKKT--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITGT--AIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + C A N+P+ +D++ L +GD++ + DI +P Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVP 158 >gi|333031443|ref|ZP_08459504.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] gi|332742040|gb|EGJ72522.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] Length = 200 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 82/144 (56%), Gaps = 5/144 (3%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 R +R NG +P ++YG ++ + A D+ +Y+ + + L+ GK+ + ++ +D Sbjct: 25 REIRNNGGVPCVLYGGETNHH-FTVKASDLRGLVYTPDIHVVNIDLE-GKQFMAIL-QDI 81 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q PVSD ++H DF +++E + + + VP++ + + G+K GGKL ++ + Sbjct: 82 QFHPVSDKILHVDFKEINETNPIVMEVPIKL--QGLAKGVKAGGKLQSQMRKLKVRALYT 139 Query: 142 NIPDSITVDLNDLKIGDSIHMEDI 165 NIP+ + +D+ L++G +I + ++ Sbjct: 140 NIPERLVIDVTKLELGKTIKVGEV 163 >gi|149194451|ref|ZP_01871548.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] gi|149135626|gb|EDM24105.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] Length = 178 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + + LR++G + A IYG + A D K Y +N I + Sbjct: 2 LEGIIRESTSKSATKKLRRDGYLIANIYGKGQENINAAFKKSDFIK--YMRNKEHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + ++YQ DPV+ L+H D L +G +VP++ + G+K G L Sbjct: 60 KVGNKEFKAVVQEYQKDPVTGDLLHVDLLIAQDGVKQYFYVPIKV--KGTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + +PD +D+++L +GD+I + DI PE +I I ++ Sbjct: 118 VYHRRRIKVKSTPEKLPDYFELDVSNLDVGDNILIRDIEFPEGVECYLNPSIPIVGVI 175 >gi|187918701|ref|YP_001884204.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia hermsii DAH] gi|226736284|sp|B2S1C8|RL25_BORHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119861549|gb|AAX17344.1| LSU ribosomal protein L25P [Borrelia hermsii DAH] Length = 182 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 3/153 (1%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 G AR +R +IPA++YG SD I + + + + + ++K T+L L GK V Sbjct: 16 GSLRARRIRAESEIPAVVYGKESDVLHIKIKSSEFNNK-FAKFTDNTVLILSDGKIEKCV 74 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 KD + ++ H DF +V + + + ++F+ S G+K+GG L+V+ ++ + Sbjct: 75 FIKDVSENLTKRLIYHVDFYEVDKTKDIERDIAIKFVG--ASVGVKEGGTLSVLRTKIKV 132 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 N+P+ + VDL +K GD + +DI LP+ Sbjct: 133 KSLPLNLPEFVEVDLTPVKKGDQVTFKDIVLPD 165 >gi|57237362|ref|YP_178375.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni RM1221] gi|86149073|ref|ZP_01067305.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151425|ref|ZP_01069640.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153932|ref|ZP_01072135.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597453|ref|ZP_01100688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|153950943|ref|YP_001398644.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. doylei 269.97] gi|157414608|ref|YP_001481864.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81116] gi|205356039|ref|ZP_03222807.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218561970|ref|YP_002343749.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315123880|ref|YP_004065884.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|68053031|sp|Q5HWG0|RL25_CAMJR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153129|sp|Q9PII8|RL25_CAMJE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223672|sp|A7H564|RL25_CAMJD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|172047037|sp|A8FKA0|RL25_CAMJ8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57166166|gb|AAW34945.1| ribosomal protein L25 [Campylobacter jejuni RM1221] gi|85840431|gb|EAQ57688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841772|gb|EAQ59019.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|85842893|gb|EAQ60105.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190514|gb|EAQ94488.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359676|emb|CAL34462.1| putative 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|152938389|gb|ABS43130.1| ribosomal protein L25 [Campylobacter jejuni subsp. doylei 269.97] gi|157385572|gb|ABV51887.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81116] gi|205346163|gb|EDZ32798.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284925583|gb|ADC27935.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni IA3902] gi|307747248|gb|ADN90518.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni M1] gi|315017602|gb|ADT65695.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057732|gb|ADT72061.1| LSU ribosomal protein L25p [Campylobacter jejuni subsp. jejuni S3] gi|315928388|gb|EFV07702.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930528|gb|EFV09571.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 305] gi|315931612|gb|EFV10578.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 327] Length = 178 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITGT--AIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + C A N+P+ +D++ L +GD++ + DI +P Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVP 158 >gi|330995949|ref|ZP_08319844.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] gi|329574288|gb|EGG55863.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] Length = 197 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 10/170 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK--PIALSAKDISKRL----YS 57 KE + +R GK +AR +R+ +P +YG D P+AL+ + L YS Sbjct: 2 KEINVKGTVRTVFGKKAARDIRRANAVPCNLYGEAKDENGAPVALAFTTTNDELRNLIYS 61 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + L +D GKE V+ K+ Q PV D ++H DF +++E + + VP++ Sbjct: 62 PDIYVVNLNID-GKEYKAVL-KELQFHPVKDNVLHVDFYEITETKPIIMEVPIKL--NGL 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + G+K GG+L ++ + IP+ + +D+ L +G +I + ++ Sbjct: 118 AEGVKAGGRLAASVRKLKVKSVYTQIPERLNIDVTSLGLGKTIKVGELHF 167 >gi|297621050|ref|YP_003709187.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] gi|297376351|gb|ADI38181.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] Length = 186 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 6/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNFMTT 63 KL R K +R LR G+IPA++Y D + IA+ A D L + TT Sbjct: 2 KLKFEQRTAEKKSDSRSLRNLGKIPAVLYVRGKDSEAIAVDAADFETVLRTVKKGRLSTT 61 Query: 64 ILTL--DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L L GKE +V+ KD Q + ++H DF ++ + + V VP+ + E GI Sbjct: 62 KLALVDGTGKER-NVLVKDIQYHVTTYNVLHLDFEELLDNVKIKVKVPIECVGEVDCVGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG L V + + C ++P+ +D+ L + +S + D+ +PE + LN Sbjct: 121 KLGGVLRRVIRYLRVHCLPKDLPEFFKMDVKTLGLKESRKLSDLEIPETVRPLMDLNEVA 180 Query: 182 ATI 184 TI Sbjct: 181 VTI 183 >gi|298735534|ref|YP_003728055.1| 50S ribosomal protein L25 [Helicobacter pylori B8] gi|298354719|emb|CBI65591.1| large subunit ribosomal protein L25 [Helicobacter pylori B8] Length = 178 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKFKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|323490990|ref|ZP_08096184.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] gi|323395346|gb|EGA88198.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] Length = 214 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 4/162 (2%) Query: 6 CKLSAVMRDKVGKGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K++A R+ K SA LR G +P ++YG ++ P+ ++ D+ K L + Sbjct: 2 VKMTAQKRESSNKNSALTELRSQGNVPGVVYGFKTETTPVTVTEIDLIKTLRESG-RNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I +V+ DYQ+D + H DFL ++ + V V E S G K+G Sbjct: 61 IKLEIDGTTKNVVLSDYQMDALKGSFKHVDFLAINMSDELEVSAAVHLTGE--SAGEKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 G + EV++ ++IPD++ VD+ DL IG++I + DIR Sbjct: 119 GFITQPNREVNIRVKPSDIPDALEVDITDLAIGETITVGDIR 160 >gi|188528267|ref|YP_001910954.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|226736330|sp|B2UVP2|RL25_HELPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|188144507|gb|ACD48924.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|297380649|gb|ADI35536.1| ribosomal protein L25, Ctc-form [Helicobacter pylori v225d] gi|308062760|gb|ADO04648.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Cuz20] gi|308064256|gb|ADO06143.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Sat464] Length = 178 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|110639011|ref|YP_679220.1| 50S ribosomal protein L25/general stress protein Ctc [Cytophaga hutchinsonii ATCC 33406] gi|122966643|sp|Q11RT6|RL25_CYTH3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110281692|gb|ABG59878.1| LSU ribosomal protein L25P [Cytophaga hutchinsonii ATCC 33406] Length = 192 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 104/192 (54%), Gaps = 18/192 (9%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK---PIALSAKDISKRLYSKNF 60 K+ ++ R +GK ++ LR + +P ++YG S P+ L +DI +Y+ Sbjct: 2 KQVEIIGYSRANLGKKGSKDLRLDSNVPCVLYGGESQLHFHVPMFL-FRDI---IYTGVA 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T +L L+ GK+ V+ ++ Q P++++L+H DFL + + V +++PV+F E SPG Sbjct: 58 CTVLLNLE-GKQYKCVV-QEVQFHPINEMLLHVDFLLLDDKKQVKMNIPVKF--EGTSPG 113 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN-- 178 + +GGKL + + ++PD I D++ L++ S+ + DI KT++ + LN Sbjct: 114 VIKGGKLVQKVATLQVKAFPKDLPDVILADISQLELAKSVKVGDI----KTNNYTILNAK 169 Query: 179 -ITIATIVAPIS 189 I + T+ P S Sbjct: 170 SIPVCTVTIPRS 181 >gi|118444097|ref|YP_877070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] gi|118134553|gb|ABK61597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 194 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 12/170 (7%) Query: 20 SARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +A +R+NG++P IIYG ++ P+ +S + RL +N +I L + E+ + + Sbjct: 16 TANKIRRNGEVPCIIYGEHLEKSIPVKVSYNKLM-RLLKENSKGSIFKLKLNDEIRNCVI 74 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK--QGGK--LNVVCHEV 134 K+ Q D +S +IH DF V++ + + +PV F GI+ Q K L E+ Sbjct: 75 KEIQNDALSGNVIHVDFQNVNKNEVIKMTIPVEF------TGIESLQSRKLILETFITEI 128 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + IP++I +D + + D I + DI+LPE +S+ + +A + Sbjct: 129 EMQGKVEEIPENIVIDASTMNFDDKIFVHDIKLPEGIRLLSEADALVAVV 178 >gi|126662578|ref|ZP_01733577.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] gi|126625957|gb|EAZ96646.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] Length = 200 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ VGK + + +R G +P +IYG + P + +Y+ N T ++ L+ Sbjct: 11 RENVGKKATKAVRDAGMVPCVIYGG-NQPVHFVADERAFKDLVYTPNAHTVVIELNGASH 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 +VI +D Q PVSD ++H DF +S+ + + VPV+ SPG+ GG L + Sbjct: 70 --NVIMQDIQFHPVSDKILHIDFFNLSDDKEIVMEVPVKIT--GTSPGVLLGGVLRLNQR 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + + N+PD + +++L++G+ +++ Sbjct: 126 RLKVKALPKNLPDFVEASISELQMGNKLYV 155 >gi|313683047|ref|YP_004060785.1| LSU ribosomal protein l25p [Sulfuricurvum kujiense DSM 16994] gi|313155907|gb|ADR34585.1| LSU ribosomal protein L25P [Sulfuricurvum kujiense DSM 16994] Length = 178 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + + R++G + A IYG + A D + + +K + + + Sbjct: 2 LEGIVRESIGKAATKAYRRDGYLIANIYGKGLENVHAAFKMNDFIRTVRNKETVAFAVKV 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 D GKE+ +++ + Y+ PVS L+H D + G HVPV+ + +P G+K G Sbjct: 62 D-GKEM-NLVVQGYESHPVSGNLLHVDLMVAQPGVVTHYHVPVKAVG---TPVGLKNKGM 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + + N+P SIT+D+ L +GDS+ + D+ E + +++ +I+ Sbjct: 117 LFVAKKRLRVKAAIENLPTSITIDVAPLDLGDSVLVRDLPRVENVTFTDSDRVSVLSII 175 >gi|317013266|gb|ADU83874.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Lithuania75] Length = 178 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|227501529|ref|ZP_03931578.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] gi|227077554|gb|EEI15517.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] Length = 221 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 6/175 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR LR++ ++P +IYG+ +P A+ DI + L N + +L L+I E Sbjct: 12 RTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDI-QSLVRNNGVNAVLELEIEGE 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ + ++ + H D L + G V V VP+ E+ +PG +V+ Sbjct: 71 QYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGES-APGTMHIQDADVLMV 129 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E +L NIP+ I + + L+ G+ I DI +PE T+ ++ I +I P Sbjct: 130 EADVL----NIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETVILSITLP 180 >gi|210135663|ref|YP_002302102.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori P12] gi|226736328|sp|B6JNZ4|RL25_HELP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|210133631|gb|ACJ08622.1| 50S ribosomal protein L25 [Helicobacter pylori P12] Length = 178 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVI 175 >gi|212550489|ref|YP_002308806.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226736279|sp|B6YQC3|RL25_AZOPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212548727|dbj|BAG83395.1| 50S ribosomal protein L25 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 189 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 85/159 (53%), Gaps = 4/159 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K +L RD +GK + + RK IP ++YG + + +++ K +Y+ + Sbjct: 2 KTFQLKGFRRDFLGKKAVKAYRKESLIPCVLYGGNENVIHFNVFRENLRKLVYTPD--VF 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L I ++L I K+ Q PV+D ++H DFL++ + V + +PV + E + GIK Sbjct: 60 IVNLCIEEKLYLSILKEIQFHPVNDEILHVDFLRIFKNKPVIIEIPV--VLEGLAEGIKA 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 GGKL ++ + + P+ + +++ +L++G +I + Sbjct: 118 GGKLCSEMRKLKVKGFYKDFPERLVINVENLELGKTIQV 156 >gi|320335303|ref|YP_004172014.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] gi|319756592|gb|ADV68349.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] Length = 227 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 6/163 (3%) Query: 27 NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDP 85 G +PA+ Y ++ A+ K R + + T + + I G E + K Q+D Sbjct: 16 EGYMPAVAYHQGTNVM-FAIERKAFD-RAFRQQGKTGLFDIAIEGGETFPALVKAVQMDK 73 Query: 86 VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIP 144 IHADFL V+ G V V VPV KS G GG ++VV H +S++ P IP Sbjct: 74 RKREAIHADFLMVTYGEPVQVDVPVH--TTGKSQGEIMGGLVDVVVHNLSVIAPGPRRIP 131 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 I VD+ L IGD + DI LP+ S ++T+ +++ P Sbjct: 132 TEIAVDVTKLNIGDHVKAGDIALPDGVKLASDADLTVISVLPP 174 >gi|159027424|emb|CAO89389.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 185 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 13/172 (7%) Query: 22 RLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDI------GKELV 74 R LR+ G IPA++YG N ++ + + K L + T++ +++ GK L+ Sbjct: 17 RALRRQGLIPAVLYGHNGTESVSLVVGEKAALTLLKKASVNNTLVDVNVPEMPWTGKALL 76 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 ++ Q P L H F VS + + VP++ I E + G KQGG + +EV Sbjct: 77 ----QEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAIGE--AIGTKQGGLIEQFVNEV 130 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 ++ C A+NIP+ I D++ + +G S+ + D+++PE + + T+ IVA Sbjct: 131 NVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTLKDDPHTTVFAIVA 182 >gi|311740785|ref|ZP_07714612.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304305|gb|EFQ80381.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] Length = 215 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + L N + +L L Sbjct: 7 IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDI-QSLVRNNGVNAVLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I E + K + ++ + H D L + G V V VPV E + G Sbjct: 66 EIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGE-PAAGTMHIQDA 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V+ E +L NIP+ I V + L+ G I D+ +PE T+ +++ + I +I P Sbjct: 125 DVLLVEADVL----NIPEEIEVSIEGLEDGAVITAADVTMPEDTTLVAEEDTVIVSISLP 180 >gi|255562637|ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 253 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 23/202 (11%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-----------NMSDPKPIALSAKDISKRLY 56 + A+ R+ G A R G+IPA+++ ++S + + K I L Sbjct: 29 IQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQSILT 88 Query: 57 SKN---FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 S F +T L I E ++P D + +++ F+ +G+ + Sbjct: 89 SVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIKVHRDEETGKILNLVFVWADDGTELK 148 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V VP+ F E PG+K+GGKLN + + +LCPA +IP + VD++ L IGD + M D+ Sbjct: 149 VDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVSMGDV 208 Query: 166 RLPEKTSSMSQ-LNITIATIVA 186 + +S+ NI I IV+ Sbjct: 209 EVHPSLKLLSKNENIPICKIVS 230 >gi|283955736|ref|ZP_06373227.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] gi|283792691|gb|EFC31469.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] Length = 178 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITGT--AIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + C A N+P+ +D++ L +GD++ + DI +P Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVP 158 >gi|289704880|ref|ZP_06501297.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] gi|289558376|gb|EFD51650.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] Length = 212 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 7/180 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N + T+ Sbjct: 4 QLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNALLTV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G+E + V+PKD Q + D + H D ++V G V V V + +PG + Sbjct: 64 VN-EAGEEHL-VLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVEV-TVQVEGEVAPGTEY- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V V + A ++P+++T+ + + GD ++ D+++P + + +I IAT+ Sbjct: 120 -VLDYVT--VPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIVIATV 176 >gi|189485712|ref|YP_001956653.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226694582|sp|B1GYU9|RL25_UNCTG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170287671|dbj|BAG14192.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 239 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 79/167 (47%), Gaps = 6/167 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 KE L A R KG LRK+G+IPAI YG P+ IA+S+K + + N Sbjct: 2 KEVILDAQARTVGSKGDLAFLRKSGKIPAIFYGKGIKPEAIAVSSK-VFVSIMEANGANV 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L+ I K D ++ IH DF +S + V VPV + G+K Sbjct: 61 IINLNFKDGKKAAIVKSLDRDFLTQHTIHIDFHAISLEDKIEVLVPVHI--AGVADGVKN 118 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 GG + + EV + NIP I+VD+ L+IG I + D LPE Sbjct: 119 FGGVMEFIVREVKVEAIPRNIPQKISVDVKALRIGQGITVAD--LPE 163 >gi|315585883|gb|ADU40264.1| 50S ribosomal protein L25 [Helicobacter pylori 35A] gi|317178201|dbj|BAJ55990.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F16] gi|317182701|dbj|BAJ60485.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F57] Length = 178 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|239917085|ref|YP_002956643.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|281414453|ref|ZP_06246195.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|259646691|sp|C5C9D7|RL25_MICLC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239838292|gb|ACS30089.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] Length = 207 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 7/180 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N + T+ Sbjct: 4 QLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNALLTV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G+E + V+PKD Q + D + H D ++V G V V V + +PG + Sbjct: 64 VN-EAGEEHL-VLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVEV-TVQVEGEVAPGTEY- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V V + A ++P+++T+ + + GD ++ D+++P + + +I IAT+ Sbjct: 120 -VLDYVT--VPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIVIATV 176 >gi|41407077|ref|NP_959913.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464181|ref|YP_880402.1| 50S ribosomal protein L25 [Mycobacterium avium 104] gi|254774032|ref|ZP_05215548.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. avium ATCC 25291] gi|71153152|sp|Q741V8|RL25_MYCPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41395428|gb|AAS03296.1| RplY [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165468|gb|ABK66365.1| ribosomal protein L25, Ctc-form [Mycobacterium avium 104] Length = 219 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 14/183 (7%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLTAAVRTETGKGASRRARRAGKIPAVLYGHGTDPQHLELPGHDFAAVLRHAG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + HAD L V G V V V I + +PG Sbjct: 67 LDIDGKEQL-ALTKALDIHPIRRTIQHADLLVVRRGEKVVVEV-TVVIEGDAAPG----- 119 Query: 126 KLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++V E S + A +IP+ TV + D + G I LP+ + +S + + Sbjct: 120 --SLVTQEASTIEIEAEALSIPEQFTVSVEDAEPGTQFTAGQIALPKGVNLISDPELLVV 177 Query: 183 TIV 185 +V Sbjct: 178 NVV 180 >gi|255325403|ref|ZP_05366507.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] gi|255297489|gb|EET76802.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] Length = 217 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + L N + +L L Sbjct: 7 IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDI-QSLVRNNGVNAVLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I E + K + ++ + H D L + G V V VPV E + G + Sbjct: 66 EIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGEPAA------GTM 119 Query: 128 NVVCHEVSLLCPAN--NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ +V LL A+ NIP+ I V + L+ G I D+ +PE T+ +++ + I +I Sbjct: 120 HIQDADV-LLVEADVLNIPEEIEVSIEGLEDGAVITAGDVTMPEDTTLVAEEDTVIVSIS 178 Query: 186 AP 187 P Sbjct: 179 LP 180 >gi|317181179|dbj|BAJ58965.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F32] Length = 178 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|108563842|ref|YP_628158.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori HPAG1] gi|217031842|ref|ZP_03437345.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254780006|ref|YP_003058113.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori B38] gi|308185266|ref|YP_003929399.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] gi|122980429|sp|Q1CRD8|RL25_HELPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|107837615|gb|ABF85484.1| ribosomal protein L25 [Helicobacter pylori HPAG1] gi|216946494|gb|EEC25096.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254001919|emb|CAX30172.1| 50S ribosomal subunit protein L25 [Helicobacter pylori B38] gi|261840172|gb|ACX99937.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 52] gi|308061186|gb|ADO03082.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] Length = 178 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|257877122|ref|ZP_05656775.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] gi|257811288|gb|EEV40108.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] Length = 204 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PAI+ G + PIA++A ++ K + +N + T++T+ + + V+ + K+YQ Sbjct: 21 LRHEGKVPAIVNGYKVESTPIAVNAAELEK-ILRENGLNTVITISLEGKKVNTLIKEYQS 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + L H +FL V V V I E S G+K GG L + V + + + Sbjct: 80 DTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ + +D+ L+IGDS+ + D+ Sbjct: 138 PERVEIDVTSLEIGDSLTVADL 159 >gi|257867045|ref|ZP_05646698.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257873380|ref|ZP_05653033.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] gi|257801101|gb|EEV30031.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257807544|gb|EEV36366.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] Length = 204 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PAI+ G + PIA++A ++ K + +N + T++T+ + + V+ + K+YQ Sbjct: 21 LRHEGKVPAIVNGYKVESTPIAVNAAELEK-ILRENGLNTVITISLEGKKVNTLIKEYQS 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + L H +FL V V V I E S G+K GG L + V + + + Sbjct: 80 DTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ + +D+ L+IGDS+ + D+ Sbjct: 138 PERVEIDVTSLEIGDSLTVADL 159 >gi|319956047|ref|YP_004167310.1| LSU ribosomal protein l25p [Nitratifractor salsuginis DSM 16511] gi|319418451|gb|ADV45561.1| LSU ribosomal protein L25P [Nitratifractor salsuginis DSM 16511] Length = 178 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A IY N D A + + + K + + Sbjct: 2 LEGIVRESIGKSNAKKLRRDGYLVANIYANGVDNVHAAFKQGEFIRTVRRKEKLD--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +V+ ++YQL PV+ ++H D G VPV + K GIK G L Sbjct: 60 KVGDTEYNVVIQEYQLHPVTGEIMHVDLRVAIPGHVTDYLVPVETVGLPK--GIKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + P IP T+D++DL +SI + DI PE M + ++++ ++ Sbjct: 118 VITKRRLRVRGPIEKIPAKFTLDVSDLDRDESILVRDIEAPEGCRLMDRPHVSVCGVI 175 >gi|320450996|ref|YP_004203092.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] gi|320151165|gb|ADW22543.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] Length = 206 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ G+ A LR+ G++P +IY + K + + + K + I Sbjct: 2 EYRLKAQYRE--GEKPA-ALRRAGKLPGVIYNKHLNRK-VYVELGEFDKVFRQASIHHVI 57 Query: 65 -LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L L G+EL ++ + LD H DF +S+ V +++P+RF+ + G+++ Sbjct: 58 VLELPDGQELPTLV-RQVNLDKRRRRPEHVDFYVLSD-EPVEMYIPLRFVGTPQ--GVRE 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA Sbjct: 114 GGVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAISPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|317014911|gb|ADU82347.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Gambia94/24] Length = 178 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|53712489|ref|YP_098481.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis YCH46] gi|60680689|ref|YP_210833.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis NCTC 9343] gi|253563480|ref|ZP_04840937.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|265762652|ref|ZP_06091220.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|68053087|sp|Q64X29|RL25_BACFR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81316243|sp|Q5LG55|RL25_BACFN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52215354|dbj|BAD47947.1| putative 50S ribosomal protein L25 [Bacteroides fragilis YCH46] gi|60492123|emb|CAH06886.1| putative ribosomal L25p family stress protein [Bacteroides fragilis NCTC 9343] gi|251947256|gb|EES87538.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|263255260|gb|EEZ26606.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|301162216|emb|CBW21761.1| putative ribosomal L25p family stress protein [Bacteroides fragilis 638R] Length = 196 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 79/142 (55%), Gaps = 5/142 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R NG +P ++YG + ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRNNGGVPCVLYGG-EEVVHFTVTNEGLRNLVYTPHIYVVDLVID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKLKVKALYNII 141 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ +T++++ L +G ++ + ++ Sbjct: 142 PEKLTINVSHLGLGKTVKVGEL 163 >gi|325478656|gb|EGC81767.1| ribosomal protein L25, Ctc-form [Anaerococcus prevotii ACS-065-V-Col13] Length = 216 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 9/164 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A R+ GK LR +PA+IY + + +++++ K L K +TI Sbjct: 3 EIVLQAQKREATGKNKVNKLRNEELVPAVIYAKGEENINVQVTSREFEKVL-KKAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK---SPGI 121 +TLD G E V+ K YQ P +I +H DF +++ T+ V VPV + + P + Sbjct: 62 ITLDFGDEKKDVLIKAYQNHPFKNIFLHVDFQAINQNETIRVQVPVVLVGRDDIRVEPSV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 N+ EV C IP + V+++DL+IGD+ + D+ Sbjct: 122 LVQ---NIDVVEVE--CLPRYIPQTADVEVSDLQIGDNRTVSDL 160 >gi|255007966|ref|ZP_05280092.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis 3_1_12] gi|313145682|ref|ZP_07807875.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] gi|313134449|gb|EFR51809.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] Length = 196 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 5/142 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R NG +P ++YG + ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRNNGGVPCVLYGG-GEVVHFTVTNEGLRNLVYTPHIHVVDLIID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKLKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ +TV+++ L +G ++ + ++ Sbjct: 142 PEKLTVNVSHLGLGKTVKVGEL 163 >gi|217033872|ref|ZP_03439296.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] gi|216943635|gb|EEC23080.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] Length = 178 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + + +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITRANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|223038596|ref|ZP_03608889.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] gi|222879998|gb|EEF15086.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] Length = 178 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 6/162 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G++ + V+ +YQ DPV++ L H D G +PV+ +P G+K G Sbjct: 60 KVGEKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPVK---PYGTPVGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 L V +++ C A N+P+S +D++ L + D++ + DI +P Sbjct: 117 LIVSKRRLAVKCAAENLPNSFDIDVSGLDVDDTVLVRDIAVP 158 >gi|315453575|ref|YP_004073845.1| Ribosomal protein L25, ctc protein-like protein [Helicobacter felis ATCC 49179] gi|315132627|emb|CBY83255.1| Ribosomal protein L25, ctc protein homolog [Helicobacter felis ATCC 49179] Length = 178 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R K+ K + LRK G + A +YG+ D + L K T + Sbjct: 2 LEGQVRAKLSKSERKTLRKEGYLLANLYGHNVPNVYATFHTNDFIRFLKHKP--TLDFQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G++ V+ ++YQ DPVS+ L+H D L ++ G+ HVPV+ + +P G+K G Sbjct: 60 KVGEKAYQVVVQNYQKDPVSNALMHVDLLVLNTGAVSKFHVPVKV---HGTPVGLKNKGI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + V + C ++ S +D++ L +GD I + D+++P + N + ++ Sbjct: 117 LMISKSRVQVACKPEDLISSFELDVSSLDVGDVILVRDLKVPASVKILENPNNAVVGVI 175 >gi|283458589|ref|YP_003363222.1| 50S ribosomal protein L25 [Rothia mucilaginosa DY-18] gi|283134637|dbj|BAI65402.1| ribosomal protein L25 [Rothia mucilaginosa DY-18] Length = 219 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 12/183 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+SA +R GKG AR +R G IPA+IYG+ +PK + L + + IL Sbjct: 6 KISATVRSDFGKGYARRIRMAGDIPAVIYGHGEEPKHVVLPGHATT---LAARVPNAILD 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + KD Q + L H D L V G V + VPV E P + G Sbjct: 63 LDIEGESHLAMIKDIQRHAIRPELQHIDLLTVKRGERVEIEVPVHVEGE---PAV--GAV 117 Query: 127 LNVVCHEVSLLCPANNI--PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 N E LL A+ + P+++TV + + G + D+ LP + ++ + I + Sbjct: 118 AN--QEETVLLVEADALKAPEALTVSIEGREAGAHVLASDVELPSGVTLVADAELLIVNV 175 Query: 185 VAP 187 P Sbjct: 176 SEP 178 >gi|15646105|ref|NP_208287.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 26695] gi|2500311|sp|P56078|RL25_HELPY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|2314675|gb|AAD08537.1| general stress protein (ctc) [Helicobacter pylori 26695] Length = 178 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VP++ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPIK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|332703820|ref|ZP_08423908.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] gi|332553969|gb|EGJ51013.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] Length = 207 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 10/191 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +LS R +VGKG R +R G +P I Y + P+ + ++K LY K + Sbjct: 4 ENQLSVEKRVRVGKGPVRDVRAEGFVPGIYYDAKGENIPVKVREVPLTK-LYEKVGKAHV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVS-----DILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 TL I E + K + +S ++H DF V + V VPV K+P Sbjct: 63 FTLKIESEG-QITEKPVFIWQISRHAYKKQIMHVDFYGVDLNKPIRVMVPVNVTG--KAP 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+ GG + + ++ L C IP+++TVD++ + I D++H+ + LP+ ++ N Sbjct: 120 GLILGGVVQIFRDKIELECLPLEIPETVTVDVSSMNINDTVHISSLPLPQGVKAVYGDDN 179 Query: 179 ITIATIVAPIS 189 + +V P S Sbjct: 180 FAVVGVVPPAS 190 >gi|15834802|ref|NP_296561.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270284968|ref|ZP_06194362.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270288992|ref|ZP_06195294.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Weiss] gi|301336365|ref|ZP_07224567.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum MopnTet14] gi|13633862|sp|Q9PLC2|RL25_CHLMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7190219|gb|AAF39056.1| general stress protein Ctc [Chlamydia muridarum Nigg] Length = 185 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 6/176 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDI 69 R+ K + +R+ G IPA++Y + + A+ +K L S +T+ TL Sbjct: 8 RETDKKSVIKKIRQQGGIPAVLYSGGKSLANVVIDARVFNKFLSTLESGALASTVFTLSY 67 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNV 129 + + KD Q + +IH DF ++ E V +++P+R IN G+K GG L Sbjct: 68 EGREIKALVKDIQYHVTTYDVIHLDFEELVEDREVRLNIPIRCINTVDCVGVKLGGSLRQ 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 V + ++C +I + +D+ L + ++ + DIR+PE + + ++ +T+A Sbjct: 128 VIRYMRVVCKPKDIVPFLELDVQSLGLSQTLKLSDIRIPEGIKPVTPLKEVAVTVA 183 >gi|283955211|ref|ZP_06372712.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] gi|283793248|gb|EFC32016.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] Length = 178 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVH-VPVRFINENKSPGIKQGGK 126 +G + + V+ DYQ DPV+ L H D L+V++ ++ + VPV+ + G+K G Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVD-LKVAQKDVISKYMVPVKITGT--AIGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + C A N+P+ +D++ L +GD++ + DI +P+ Sbjct: 117 LIQSKRRLKVKCTAENLPNFFELDVSKLDVGDALLVRDIVVPK 159 >gi|224053837|ref|XP_002298004.1| predicted protein [Populus trichocarpa] gi|222845262|gb|EEE82809.1| predicted protein [Populus trichocarpa] Length = 231 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPKPIALSAKDISKRLYSK----NFM 61 A+ R GK + RK G++P+I++ G K + K+ + L ++ F+ Sbjct: 30 AIPRSDSGKNVSAKERKAGRVPSIVFEQEDGQHGGNKRLISVKKNRIRNLVNELGRPFFL 89 Query: 62 TTILTLDIGKEL--------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFI 113 + + LD+ + V V+PK L +D ++ F++ + + V +P+ F Sbjct: 90 SRLFELDVRPQFESDEVIEKVRVLPKAIHLHAGTDEPLNVTFIRAPSHALLKVDIPLVFR 149 Query: 114 NENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 E+ SPG+++G LN + V +CPA+ IP I VDL++L +G + M D+++ Sbjct: 150 GEDISPGLRKGAYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKV 203 >gi|325000632|ref|ZP_08121744.1| 50S ribosomal protein L25 [Pseudonocardia sp. P1] Length = 231 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 7/165 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++ A R + GKG+AR R+ G+IPA++YG+ +DP ++L + + + + + + Sbjct: 3 QTRIPAENRTEFGKGAARRTRRAGKIPAVLYGHGTDPVHLSLPSLEFAAVVRDQG-RNAV 61 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L LD+ G + + K + P+ + H D L + G V V + V + + +PG Sbjct: 62 LELDVDGSKPQLALTKTVVVHPLRPYIEHVDLLVIKRGEKVEVELDV-VVTGDAAPGSLV 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 LN V E L NIP++I V + + +IG + +D+RLP Sbjct: 121 TQDLNTVLVEADAL----NIPENIEVSVEEAEIGTQYYAKDLRLP 161 >gi|302144151|emb|CBI23278.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 23/183 (12%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNM-----SDPKPIALSAKDISKRL 55 + A+ R+ G + R G+IPA+++ GN+ S + + K I L Sbjct: 36 IQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNINGRSVSRKRLLTTERKQIQAIL 95 Query: 56 YS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 S + +T L I E V+P D + +++ F EGS + Sbjct: 96 KSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWADEGSEL 155 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD I M D Sbjct: 156 KVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHD 215 Query: 165 IRL 167 + + Sbjct: 216 VEV 218 >gi|120405737|ref|YP_955566.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium vanbaalenii PYR-1] gi|119958555|gb|ABM15560.1| LSU ribosomal protein L25P [Mycobacterium vanbaalenii PYR-1] Length = 218 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG++R R+ G++P ++YG+ ++P+ + L+ +D + L +LTL Sbjct: 9 LPAQVRTATGKGASRRARREGKVPVVLYGHGTEPQHLELNGRDFAAVLRHAG-TNAVLTL 67 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + K ++ P+ + HAD L V G VTV V + I + +PG Sbjct: 68 DIDGTEQLALTKAIEVHPIRRNIQHADLLVVRRGEKVTVEVNI-VIEGDATPGTLVAQDA 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N V E + +IP+ V + + G I I LP + +S + IVA Sbjct: 127 NAVEIEADV----QSIPEQFVVSVEGAEEGTQILAGQIELPSGVTLISDPETLVVNIVA 181 >gi|226528050|ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG38519.1| 5S rRNA binding protein [Zea mays] Length = 240 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 17/175 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-------GN-MSDPKPIALSAKDISKRL-YSK 58 + AV R+ G +A R++G++PA++ GN ++ + + +++ L S Sbjct: 39 IQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQSP 98 Query: 59 NFMTTILTLDI-----GKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++T + L + ++H V+P D S +++ ++ EG+ + V +PV Sbjct: 99 YFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKVDLPV 158 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI Sbjct: 159 EFKGEDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDI 213 >gi|328949924|ref|YP_004367259.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] gi|328450248|gb|AEB11149.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] Length = 209 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + + LR G++P ++Y N + I + + K ++ K + + Sbjct: 2 EYRLKAYTREN---ENPKQLRAQGKLPGVLY-NKEINRKIYVELNEFDK-VFRKASIHHV 56 Query: 65 LTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +TL++ + + + LD H DF +S+ V ++VP++F+ + G++ Sbjct: 57 ITLELPDGTTYDTLVRQLNLDKRRRRPEHVDFFVLSD-EPVEMYVPLKFVG--TAEGVRL 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V H+V + NIP+ I VD++ L IG S+H+ DI LPE T+ T Sbjct: 114 GGVLEQVLHDVLVRVAPRNIPEFIEVDVSGLGIGQSLHLADITLPEGVELAMSPEETVVT 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|307103465|gb|EFN51725.1| hypothetical protein CHLNCDRAFT_139900 [Chlorella variabilis] Length = 239 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 9/171 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDISK---RLYSKNFMTT 63 L+A R VG ++ LRK G+ P I++ G + +A +K + K +L + + Sbjct: 51 LAAEERGLVGSIASNKLRKAGKTPGIVFSGPGGEQHLLAFDSKALGKLVTKLGRTAWACS 110 Query: 64 ILTLDIGKE-----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L I E V + + + +D + + F+ V V VP++ I E+ S Sbjct: 111 VFDLQIQGEDGSSRTVRALGRQVHMTSTTDAVENVTFVFCPPERQVRVEVPLKVIGEDVS 170 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 PGIK GG++N + + L ++IP TVD++ +++ D ++ D+ +P+ Sbjct: 171 PGIKGGGRVNWIRRTIPCLARGDSIPRDFTVDISKMELNDKLYFTDLAVPQ 221 >gi|224538934|ref|ZP_03679473.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] gi|224519452|gb|EEF88557.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] Length = 196 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 81/148 (54%), Gaps = 5/148 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + + +RK+ +P ++YG S+ +SA + +Y+ + L +D GK+ ++ I K Sbjct: 23 ALKAIRKDNGVPCVLYGG-SENIHFTVSADGLRNLVYTPHIYVVDLIID-GKK-INAIMK 79 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + Sbjct: 80 DIQFHPVKDTILHVDFYQIDESKPIVMEVPVQM--EGLAEGVKAGGKLVLQMRKLKVKAL 137 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRL 167 N IP+ +TV++ L +G ++ + ++ Sbjct: 138 YNIIPEKLTVNVAHLGLGKTVKVGELNF 165 >gi|260171341|ref|ZP_05757753.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D2] gi|315919652|ref|ZP_07915892.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693527|gb|EFS30362.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 196 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 5/144 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +RK+G +P ++YG ++ ++ + + +Y+ + L +D GK+ V+ I KD Q Sbjct: 27 IRKDGGVPCVLYGG-NEVVHFTVTNEGLRNLVYTPHIYVVDLVID-GKK-VNAILKDIQF 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N I Sbjct: 84 HPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLALQMRKIKVKALYNVI 141 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+ + V+++ L +G ++ + ++ Sbjct: 142 PEKLIVNVSHLGLGKTVKVGELSF 165 >gi|255321864|ref|ZP_05363014.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] gi|255300968|gb|EET80235.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] Length = 178 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G + + V+ +YQ DPV++ L H D G +PV+ +P G+K G Sbjct: 60 KVGGKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPVK---PYGTPVGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V +++ C A N+P+S +D++ L I D++ + DI +P + + + + ++ Sbjct: 117 LIVSKRRLAVKCTAENLPNSFDIDVSGLDIDDTVLVRDITVPAGVTMIDADRVAVLGVI 175 >gi|167629342|ref|YP_001679841.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] gi|226736327|sp|B0TBA3|RL25_HELMI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167592082|gb|ABZ83830.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] Length = 231 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A+ R+K +G + LRK G +PA++YG I+++AK++S L + + IL Sbjct: 5 ELRAIRREKGSRGYIKELRKRGLLPAVVYGKDKPDMLISVNAKELSGLLKAMGSASAILD 64 Query: 67 LDI-GKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + G + H V+ K+ Q DPV + H DF V V +P+ + G+K G Sbjct: 65 LQVEGSDDRHKVMLKEMQRDPVGRMPNHVDFQLVDWNKPVHAEIPIHLV--GTPAGVKAG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + V + +P +D++ L++ D + + DI P + +S+ + I +I Sbjct: 123 GIIQHGLRTVEVEGLPGKLPPRFDIDISHLELHDKMTVADITSPAGIAIISEPDQVILSI 182 Query: 185 VAP 187 + P Sbjct: 183 IVP 185 >gi|224096802|ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|222853645|gb|EEE91192.1| predicted protein [Populus trichocarpa] Length = 261 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-----------MSDPKPIALSAKDISKRLY 56 + A+ R+ VG + R+ G+IPA+++ S + + K I L Sbjct: 33 IQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQILAILK 92 Query: 57 SKN---FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 S F +T L I E V+P D + +++ F EG+ + Sbjct: 93 SVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWADEGTEMK 152 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V VPV F E PG+K+GG L ++ + LCPA +IP I VD+++L I D + M DI Sbjct: 153 VDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDGLFMRDI 212 Query: 166 RLPEKTSSMSQ-LNITIATIVA 186 + +S+ N+ + IVA Sbjct: 213 EVHSSLKLLSKNENMPVCKIVA 234 >gi|261337364|ref|ZP_05965248.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] gi|270277743|gb|EFA23597.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] Length = 197 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R IPA +Y P + L K+ + L N Sbjct: 1 MATTTITLEGNLRTEFGKGPARRMRVAKLIPATVYAGGDQPVYLTLPMKETTLALRHNNA 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T L D GK + V+ KD Q +PV I+ H DF +V G + V VPV E K Sbjct: 61 LIT-LKYD-GKSTMAVV-KDVQRNPVKRIVEHVDFYEVKAGEKIEVEVPVFVEGEPKG-- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V + + N+P+ IT+D+ L G+ I + LPE Sbjct: 116 ---AATAFVDVQMLKVRADVANLPERITIDVTGLSAGEHITAAGLELPE 161 >gi|224418392|ref|ZP_03656398.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter canadensis MIT 98-5491] gi|253827710|ref|ZP_04870595.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313141923|ref|ZP_07804116.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|253511116|gb|EES89775.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313130954|gb|EFR48571.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] Length = 178 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + KN I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGRENIHCAFKRNDFIREV--KNKTDLIFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ + H D + +G V VR + K G+K G L Sbjct: 60 EVGTQKYPVVIQEYQKDPITSEITHVDLMLAQKGVEAKYSVKVRIVGIAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V + + N+P +++ DL +GD + + D+ Sbjct: 118 MVSKKRIKVKAAPENLPKDYEINVTDLDVGDVVLVRDL 155 >gi|298246012|ref|ZP_06969818.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] gi|297553493|gb|EFH87358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] Length = 212 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 10/188 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ ++ R+ GK + + LR+ G IP I G+ +D I AK + KRL +N + Sbjct: 3 KQIEMDVAPREVFGKKT-KSLRRQGLIPGNIGGHKADSVAIQFEAK-VFKRLQHENRAGS 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I L++ GK V+ + + VS + H DF +VS V++ VP+ F+ E SP +K Sbjct: 61 IYALNLPGKGAETVLVHHVEHNTVSGEIQHVDFSRVSMDEQVSIKVPLHFVGE--SPALK 118 Query: 123 --QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNI 179 +G L++ EV C A++I +I VDL+ LK + D+I+ DI+LP+ + Sbjct: 119 DTKGTLLHMDALEVQ--CRASDILPAIEVDLSPLKTLDDTIYARDIKLPKGFKLVGDPEE 176 Query: 180 TIATIVAP 187 ++A + P Sbjct: 177 SVAKVAPP 184 >gi|307299263|ref|ZP_07579064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915059|gb|EFN45445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] Length = 214 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 5/165 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A +R+ G+ AR L G+IPA++YG + P++L +I R+ ++ TT Sbjct: 3 EINLVAELRN--GEMKARSLLNQGKIPAVVYGPELETVPVSLDKVEIL-RIMNRIAETTS 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + H K Q D V+D +IH DF S G + + +P+R + G+++G Sbjct: 60 VVISIDGKEYHTFLKGVQRDKVTDSVIHLDFYVPSSGHKMELRIPIRL--KGTPIGVEKG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 G ++ + +E+ + +I + I VD++ +G + + D+ +PE Sbjct: 118 GIVDHIINELPVSVLPKDIVEEIIVDVSSFDVGHVLRVGDLEIPE 162 >gi|237752463|ref|ZP_04582943.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] gi|229375952|gb|EEO26043.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] Length = 178 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + K + I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGKENLHCAFKRNDFIREVKKKTDL--IFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + +G V VR I K G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQKGIEAKYSVKVRTIGTPK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + + + N+P ++++DL +GD + + D+ Sbjct: 118 MMSKKRIKVKAAPENLPKDYEINVSDLDVGDVVLVRDL 155 >gi|299537535|ref|ZP_07050829.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727096|gb|EFI67677.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 211 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R K + S LR+NG IP ++YG + I L A+ +K L + ++ L Sbjct: 5 LTASKRQKGRQSSLTQLRQNGGIPGVVYGFQMESTAIMLDARAFAKMLATHG-TKSVFQL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + ++ + + Q + + H DF ++ + V +PV I + + G+ GG L Sbjct: 64 DVEGKRINAVLTEVQRCALKGNVKHVDFKSINMSEELEVDIPVTVIGD--AVGVADGGFL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV + +IP++I +D+ + IG S+++ DIR + + + T+ TI P Sbjct: 122 LQPNREVRIKVKPTDIPETIEIDVTHVAIGTSLYVGDIRQQFSFEILQEDDYTLVTITPP 181 Query: 188 IS 189 + Sbjct: 182 AA 183 >gi|108801217|ref|YP_641414.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. MCS] gi|119870368|ref|YP_940320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. KMS] gi|126437197|ref|YP_001072888.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. JLS] gi|108771636|gb|ABG10358.1| LSU ribosomal protein L25P [Mycobacterium sp. MCS] gi|119696457|gb|ABL93530.1| LSU ribosomal protein L25P [Mycobacterium sp. KMS] gi|126236997|gb|ABO00398.1| LSU ribosomal protein L25P [Mycobacterium sp. JLS] Length = 222 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 6/180 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R+ G++PA++YG+ +DP+ + ++A+D + L +LT Sbjct: 8 KLTAAVRTETGKGASRRARREGKVPAVLYGHGTDPQHLEVNARDFAAVLRHAG-TNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V G VTV V V + +PG + Sbjct: 67 LDIDGTEQLALTKSLEIHPIRRNIQHADLLVVRRGEKVTVEVNVVVEG-DATPGALVTQE 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + E + +IP+ +TV + + G I + LP + +S + IV+ Sbjct: 126 ANAIEIEADV----QSIPEQLTVSVEGAEEGTQITAAQVELPSGVTLISDPETLVVNIVS 181 >gi|300122709|emb|CBK23275.2| Ribosomal protein L25 [Blastocystis hominis] Length = 253 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 8/166 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPK-PIALSAKDISKRLYSKNFM-- 61 + A R+K GK +R LRKNG IP ++YG N D + IA+ A ++ + N Sbjct: 44 IPAFRREKDGKNYSRFLRKNGAIPGVLYGSDGNGHDERILIAVPASEVDRFTKRLNLALE 103 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+ LD+ E + P+ P++D + +FL++++ + V +P+R+ N+ K+ I Sbjct: 104 CTLFELDLEGERILCFPRQLSCHPLTDKPENLNFLRMNKKTGTMVQIPIRYYNQTKNREI 163 Query: 122 KQGGKLNVVCH--EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 K GG L+ +V + +P I +L L + +ED+ Sbjct: 164 KLGGFLSTATRYLDVRVKGDVTYVPPFINCNLEKLTHKRAFGVEDL 209 >gi|167948535|ref|ZP_02535609.1| 50S ribosomal protein L25/general stress protein Ctc [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 148 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +++A R GKG++R LR+ G +P IIYG +P I+L+ ++ L + F + IL Sbjct: 23 EITAQPRSDTGKGASRRLRRTGMVPGIIYGGHQEPSMISLAHNELILHLDHEAFYSHILN 82 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G V+ KD Q P ++H DF ++S G + H +++ ++ QGG Sbjct: 83 LKVGDATEQVVLKDLQRHPAKPFIMHIDFQRISAGEKIP-HASAAALHQPRNRTRHQGG 140 >gi|254821212|ref|ZP_05226213.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium intracellulare ATCC 13950] Length = 221 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 14/183 (7%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R++G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLKVTVRAETGKGASRRARRDGKIPAVLYGHGADPQHLELPGHDFAAVLRHAG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + HAD L V G V V V I + +PG Sbjct: 67 LDIEGKEQL-ALTKSLDIHPIRRTIQHADLLVVRRGEKVVVEV-RVVIEGDAAPG----- 119 Query: 126 KLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +V E S + A +IP+ +TV + D + G I LP+ + +S + + Sbjct: 120 --TLVTQETSTIEVEADAMSIPEQLTVSVEDTEPGTQFTAGQISLPKGVNLISDPEMLVV 177 Query: 183 TIV 185 +V Sbjct: 178 NVV 180 >gi|298345582|ref|YP_003718269.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] gi|298235643|gb|ADI66775.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] Length = 208 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R +IPA++YG+ +DP + L D L K+ +++L K+ Sbjct: 12 RTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTF--LLVKDNPNAVISLKGLKD 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV ++H D L V V V VP+ I E S + LN Sbjct: 70 PAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMSGLVANQDLLN---- 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ AP Sbjct: 126 -MEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAAP 179 >gi|156741060|ref|YP_001431189.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus castenholzii DSM 13941] gi|226736357|sp|A7NI71|RL25_ROSCS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|156232388|gb|ABU57171.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Roseiflexus castenholzii DSM 13941] Length = 218 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LS R VGK RL R++G +PA +YG +P + + A+ + +Y + T Sbjct: 3 EKYTLSLEPRAVVGKKVKRL-RRSGILPATVYGKGIEPISVQVDARSFNA-VYRRAGRTA 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L I G++ + Q PV+ +IHADF V V V VP+ E +SP ++ Sbjct: 61 LVELHIAGRQPLAAFIHALQRHPVTRDIIHADFRAVDLSQEVEVAVPLHI--EGESPLVE 118 Query: 123 QG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLP 168 G LN V + + + +NIP +TVD++ L D SIH+ D+ LP Sbjct: 119 SGEAVLNQVLNAIEIRALPSNIPAHLTVDISGLDAFDKSIHVRDLALP 166 >gi|289642500|ref|ZP_06474644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] gi|289507674|gb|EFD28629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] Length = 213 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 5/167 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R + GKG AR RK G++PA++YG+ P+ I+L A D+ + + Sbjct: 3 EVRIVAEPRTEFGKGGARRTRKAGKVPAVLYGHGQPPRHISLRAHDLLHAFKTDAGTNVL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L++ +PKD Q P+ H D + + G VTV VPV + +S + Sbjct: 63 LRLELSDGTQLALPKDVQRHPIKGSFEHVDLVIIRRGERVTVEVPVTVVGTAESDTL--- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 ++ VSL A +IP SI VD+ K G +I + +P T Sbjct: 120 --VDQQLTSVSLQAAATDIPGSIEVDVTGFKAGANISAGQLVIPAGT 164 >gi|306835690|ref|ZP_07468696.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] gi|304568408|gb|EFM43967.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] Length = 237 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 6/175 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR LR++ ++P +IYG+ +P A+ DI + L N + +L L+I E Sbjct: 28 RTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDI-QSLVRNNGVNAVLELEIEGE 86 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ + ++ + H D L + G V V VP+ E+ +PG +V+ Sbjct: 87 QYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGES-APGTMHIQDADVLMV 145 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E +L +IP+ I + + L+ G+ I DI +PE T+ ++ I +I P Sbjct: 146 EADVL----SIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETVILSISLP 196 >gi|182438175|ref|YP_001825894.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778825|ref|ZP_08238090.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] gi|178466691|dbj|BAG21211.1| putative 50S ribosomal protein L25 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659158|gb|EGE44004.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] Length = 195 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 7/167 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ ++PA++YG+ ++P + L ++ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRVRRADRVPAVVYGHGAEPVHVTLPGHELLLALRTANVLIG- 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LD GK+ + VIPK Q P+ + H D L V G V V + V + +PG Sbjct: 62 LELD-GKDAL-VIPKAVQRHPLKGTIEHVDLLTVKRGEKVQVEIAVHA-EGDLAPGANL- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 L V + + + A +IP+S+TV + L GDSI +DI LP+ + Sbjct: 118 --LEFVQNTLLVEAEATHIPESVTVSVAGLDAGDSIVAKDIALPKGS 162 >gi|311898015|dbj|BAJ30423.1| putative ribosomal protein L25 [Kitasatospora setae KM-6054] Length = 200 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 7/168 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+A R + GKG+AR R+ G +P ++YG+ P + L D+ L + N + Sbjct: 3 EIRLAAESRTEFGKGAARRARRAGFVPGVVYGHGHAPVHLNLPGHDLMMALKTPN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + I + V+PK Q + + + H D L V G VTV +PV E +PG G Sbjct: 60 LVVPIEGKDEFVLPKAVQREAIKRTIEHVDLLLVKRGEKVTVEIPVHTEGE-LAPG---G 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + V + + + A ++P+S+TV + L+ G +I DI LP S Sbjct: 116 NLIENVLNALPIEAEATHLPESVTVSVEGLEAGAAITAGDIALPSGVS 163 >gi|289547989|ref|YP_003472977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] gi|289181606|gb|ADC88850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] Length = 193 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ + R K + +RK G +P IYG + + KD+ + + F+ Sbjct: 2 KRIEVKLIPRKPGKKSEIKRMRKEGYVPVEIYGKDVENTHAYMKVKDLLSLPHGETFL-- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L +I E + K+ Q + D +H D +S + + VPV F+ G+ Sbjct: 60 -LVAEIEGEKRVCLLKEVQTGWLGDDPLHVDLYDISHVRELELEVPVEFVG--TPAGVGL 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG V +++ P + IPD I VD++ L +GD++H+ DI+ PE M +A Sbjct: 117 GGTFEAVLTTLTVKAPIDRIPDKIVVDVSSLGLGDALHVRDIQPPEGCIIMDNPEEVVAV 176 Query: 184 IV 185 ++ Sbjct: 177 VL 178 >gi|121612154|ref|YP_001000021.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|148927012|ref|ZP_01810688.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] gi|167004979|ref|ZP_02270737.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|166223673|sp|A1VY30|RL25_CAMJJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87250228|gb|EAQ73186.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81-176] gi|145844420|gb|EDK21529.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 178 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ D V+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDSVTAELKHVDLKVAQKGVISKYMVPVKITGT--AIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + C A N+P+ +D++ L +GD++ + DI +P Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVP 158 >gi|218129918|ref|ZP_03458722.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|317476861|ref|ZP_07936104.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] gi|217988028|gb|EEC54353.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|316907036|gb|EFV28747.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] Length = 197 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 5/144 (3%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 + +RK+ +P ++YG + + A+ + +Y+ + L +D GK+ V+ I KD Sbjct: 25 KAIRKDNGVPCVLYG-AGENVHFTVPAEGLRNLVYTPHIYVVDLVID-GKK-VNAILKDI 81 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N Sbjct: 82 QFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGLAEGVKAGGKLTLQMRKLKVRALYN 139 Query: 142 NIPDSITVDLNDLKIGDSIHMEDI 165 IP+ + V+++ L +G ++ + ++ Sbjct: 140 AIPERLVVNVSHLGLGKTVKVGEL 163 >gi|296169883|ref|ZP_06851495.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895439|gb|EFG75141.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 222 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 9/185 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLTATVRTETGKGASRRARREGKIPAVLYGHGADPQHLELPGHDFAAVLRHAG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + HAD L V G V V V I + PG Sbjct: 67 LDIDGKEQL-ALTKALDIHPIRRTIQHADLLVVRRGEKVVVEV-RVVIEGDAVPGTLVTQ 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N + E L +IP+ +TV + D + G I LP+ + +S + + +V Sbjct: 125 DTNTIEIEADAL----SIPEQLTVSIEDAEPGTQFTAGQITLPKGVNLISDPEMLVVNVV 180 Query: 186 -APIS 189 AP + Sbjct: 181 TAPTA 185 >gi|242309277|ref|ZP_04808432.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] gi|239524318|gb|EEQ64184.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] Length = 178 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + KN I + Sbjct: 2 LSGIIRESISKADTKSLRKNGYLIANIYGKGRENIHCAFKRNDFIREV--KNKTDLIFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + G V VR + K G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQNGVEAKYSVKVRIVGIAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + +P +++ DL +GD + + D+ E + + ++ I ++ Sbjct: 118 MVSKKRIKVKAAPEKLPKDYEINVTDLDVGDVVLVRDLPQNEGVKIVERDDVAIVGVI 175 >gi|46447228|ref|YP_008593.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Protochlamydia amoebophila UWE25] gi|71153157|sp|Q6MAT1|RL25_PARUW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46400869|emb|CAF24318.1| putative general stress protein ctc [Candidatus Protochlamydia amoebophila UWE25] Length = 184 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 6/183 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS---KRLYSKNFMTTI 64 + A++R K LR+ G IPA++Y + + +A+++ + + + + S + TTI Sbjct: 1 MKAILRTGKSKSEINRLRREGMIPAVLYVRGKEGETLAINSAEFNSYLRHVKSGHLPTTI 60 Query: 65 LTL--DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TL + G E V+ KD Q + ++H DF ++ + + V VP+ G+K Sbjct: 61 FTLVDEKGSER-RVLVKDIQYAITTYQVMHLDFEELIDDHKINVKVPIECTGTVDCVGVK 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + C ++P +D+ +L + S ++D+ +PE + +N +A Sbjct: 120 LGGVLRQVIRHARIRCLPKDMPSFFELDVQELGLKQSKRLKDMNIPETVRPLIDMNEVVA 179 Query: 183 TIV 185 IV Sbjct: 180 VIV 182 >gi|282891672|ref|ZP_06300159.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498462|gb|EFB40794.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 186 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 6/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS---KRLYSKNFMTT 63 KL A R+ + + LR+ G+IPA+IY S + +++ + + +++ + TT Sbjct: 2 KLKAFKRNVEKRCNVNKLRREGKIPAVIYKKGSSGEELSVDSIMFTAALRKVEPGHLSTT 61 Query: 64 ILTLD--IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I L+ G E VI K+ Q + + +IH DF ++ +G+ V V VP+ + PGI Sbjct: 62 IFILEDENGAER-RVIVKEIQYNVTNYDVIHLDFEELIDGTPVNVKVPIEIVGVADCPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG V + + C +IP S +D++ L +G+S + D+ + + L+ Sbjct: 121 KLGGVPRQVIRSLKVRCLPKDIPASFPIDISTLSLGESRRLSDLEIANTLRPLMNLSEVA 180 Query: 182 ATIV 185 IV Sbjct: 181 VAIV 184 >gi|315656038|ref|ZP_07908936.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] gi|315490102|gb|EFU79729.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] Length = 208 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R +IPA++YG+ +DP + L D L K+ +++L K Sbjct: 12 RTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTF--LLVKDNPNAVISLKGLKN 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV ++H D L V V V VP+ I E S + LN Sbjct: 70 PAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMSGLVANQDLLN---- 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ AP Sbjct: 126 -MEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAAP 179 >gi|304391137|ref|ZP_07373089.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326020|gb|EFL93266.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 208 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R +IPA++YG+ +DP + L D L K+ +++L K Sbjct: 12 RTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTF--LLVKDNPNAVISLKGLKN 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV ++H D L V V V VP+ I E S + LN Sbjct: 70 PAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMSGLVANQDLLN---- 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ AP Sbjct: 126 -MEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAAP 179 >gi|325568384|ref|ZP_08144751.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] gi|325158153|gb|EGC70306.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] Length = 204 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 3/142 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PAI+ G + PIA++A ++ K + +N + T++ + + + V+ + K+YQ Sbjct: 21 LRHEGKVPAIVNGYKVESTPIAVNAAELEK-ILRENGLNTVIMISLEGKKVNTLIKEYQS 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + L H +FL V V V I E S G+K GG L + V + + + Sbjct: 80 DTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ + +D+ L+IGDS+ + D+ Sbjct: 138 PERVEIDVTSLEIGDSLTVADL 159 >gi|329943160|ref|ZP_08291934.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|332287742|ref|YP_004422643.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|313848313|emb|CBY17316.1| putative 50S ribosomal protein L25 [Chlamydophila psittaci RD1] gi|325506971|gb|ADZ18609.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|328814707|gb|EGF84697.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|328914996|gb|AEB55829.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila psittaci 6BC] Length = 185 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 3/164 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA+IY I + A SK L S +TI +L + + KD Sbjct: 19 IRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSSTIFSLSYEGRTIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q S +IH DF ++ E V +++P+R IN G+K GG L V + ++C Sbjct: 79 IQYQVTSYKVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVKLGGSLRQVIRALRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +I + +D+ L + + + DI+LP ++ L + T+ Sbjct: 139 KDIVPYLELDVRSLGLSQTRKLSDIQLPAGLRPITPLKEVVVTV 182 >gi|163783324|ref|ZP_02178317.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] gi|159881432|gb|EDP74943.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] Length = 201 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 7/169 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KLS + K K + +R+ G IP IYG + +SAKD + + F Sbjct: 1 MKRVSVKLSERVPGK--KSETKRMRREGFIPVEIYGKGVNNSHAWMSAKDFLSLPHGETF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + ++ + I KD Q + D IH D ++ + + V VP+ F G Sbjct: 59 L---IETEVNGDKRVCILKDIQFGWLGDNPIHVDLYDLANVTEIEVEVPIEFTG--TPAG 113 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ GG V+ H ++ ++PD I +D++ L +G+++H+ D+ PE Sbjct: 114 VELGGTFEVLMHSFTVKAKPADLPDKIVIDVSGLGLGEALHVRDVAPPE 162 >gi|308183599|ref|YP_003927726.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] gi|308065784|gb|ADO07676.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] Length = 178 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNGAFKLNPFIKYLKEKKHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P VD+ L + +SI + D++ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPVHYLVDVAPLDVNESILVRDLKKHENVKILDHDSIAVIGVI 175 >gi|154149398|ref|YP_001406855.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter hominis ATCC BAA-381] gi|166223671|sp|A7I2W4|RL25_CAMHC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|153805407|gb|ABS52414.1| ribosomal protein L25, Ctc-form [Campylobacter hominis ATCC BAA-381] Length = 178 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ S++ LR++G + A IY A D K + +K T + Sbjct: 2 LEGIVRESIGRKSSKALRRDGYLIANIYAKGFKNINAAFKVNDFIKVVKAKT--TLPFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + V+ +DYQ PV++ L H D V + VPV+ + K G++ G L Sbjct: 60 KIADKTYKVVVQDYQKHPVTNALKHVDLRIVLDNEISHYLVPVKIVGVAK--GLRNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++ C ++P+ +D++DL + DS+ + DI+LP+ S + ++ + + Sbjct: 118 VQSKRRLTVKCAGKDLPNEFVLDVSDLDVNDSLLVRDIKLPDNVSIVENNSVAVVGV 174 >gi|317120947|ref|YP_004100950.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] gi|315590927|gb|ADU50223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] Length = 207 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 16/186 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNFMTTI 64 L AV R+ G AR +R+ G IPA++YG + P+ L A++ + L S + +T Sbjct: 5 LRAVPREP---GHARRVRREGGIPAVLYGPSGN-FPVRLDAREFHRLLASGRARGVLTVE 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L D + + K+ Q P L+H D +V E V VP+ G ++ Sbjct: 61 LVRDGQTRQLSAMVKELQWHPARGDLLHVDLFEVREDEPVRAVVPIALT------GTEEA 114 Query: 125 GKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K +V H+++ L C IP + D+ +L +G+ + ++D+ +P + ++ + + Sbjct: 115 EKRGIVQHQLAELEIECLPRYIPPVVEADVANLPVGEEVRVKDLVVPPQVRVLNDPDEIV 174 Query: 182 ATIVAP 187 A ++ P Sbjct: 175 AVLLPP 180 >gi|296085755|emb|CBI29566.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+P D + +++ F EGS + V VP+ F E+ PG+K+GG LN + + Sbjct: 55 VLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLK 114 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDI------RLPEKTSSMSQLNITIATIVAPIS 189 LCPA +IP I VD+++L IGD I M D+ +L K +M I A + S Sbjct: 115 FLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAKLERAES 174 Query: 190 G 190 G Sbjct: 175 G 175 >gi|160892146|ref|ZP_02073149.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270296234|ref|ZP_06202434.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|317480855|ref|ZP_07939936.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] gi|156858624|gb|EDO52055.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270273638|gb|EFA19500.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|316902940|gb|EFV24813.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] Length = 196 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + + +RKN +P ++YG + + A+ + +Y+ + L +D GK+ V+ I K Sbjct: 23 ALKAIRKNNGVPCVLYG-AGENVHFTVPAEGLRNLVYTPHIYVVDLVID-GKK-VNAIMK 79 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + Sbjct: 80 DIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGLAEGVKAGGKLVLQMRKLKVRAL 137 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIR 166 N IP+ + +++ L +G ++ + +++ Sbjct: 138 YNVIPERLIINVAHLGLGKTVKVGELQ 164 >gi|126653926|ref|ZP_01725770.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589586|gb|EAZ83726.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 211 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R K + S LR+NG IP ++YG + I L A+ +K L + + ++ L Sbjct: 5 LTANKRQKGRQSSLTQLRQNGAIPGVVYGFQMESTAITLDARVFAK-LLAAHGTKSVFQL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + ++ + + Q + + H DF ++ + V +PV + + G+ GG L Sbjct: 64 DVDGKRINAVLSEVQRCALKGNIKHVDFKSINMSEELEVEIPVTVTGD--AIGVADGGFL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV + IP++I +D+ ++ IG S+++ DIR + + + T+ TI P Sbjct: 122 LQPNREVRIKVKPTEIPETIEIDVTNVAIGTSLYVGDIRQQFSFEILQEDDYTLVTITPP 181 >gi|330836938|ref|YP_004411579.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] gi|329748841|gb|AEC02197.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] Length = 210 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 11/181 (6%) Query: 8 LSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTI 64 LSA +R D GS R++R +G+IPA+IYG + P I + A++ RL + F T++ Sbjct: 8 LSAELRTGDFGSSGSRRVVR-SGKIPAVIYGKNT-PLHITIDAQEF--RLKRRYFTETSL 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQ 123 L++ + K+ + KD Q D +++ + H DF +V+ G T+ V + +P G + Sbjct: 64 LSIVLSKKKHECLVKDVQEDLLNNRIKHVDFYEVTSGQTLHTRVNIELTG---NPVGARD 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + ++ + N+P+ I VD++ L + D + + D+ P +++ +AT Sbjct: 121 GGVLEHILFDIEIESLPANLPEVIRVDVSQLGLNDVLTVGDVVWPVGVKALADAETAVAT 180 Query: 184 I 184 + Sbjct: 181 V 181 >gi|260060920|ref|YP_003194000.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] gi|88785052|gb|EAR16221.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] Length = 170 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 69/117 (58%), Gaps = 3/117 (2%) Query: 55 LYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 +Y+ N T ++ + G+++ V+ +D Q PV+D ++H DF Q+ VT+ +PVR + Sbjct: 1 MYTPNAHTVVIEFEDGRKIDAVL-QDIQFHPVTDNILHVDFYQLFPDKEVTMKIPVRLLG 59 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 SPG++ GG+L ++ + N+PD VD+++LKIGD + ++ ++ E T Sbjct: 60 N--SPGVRNGGRLLFRKRKLVIRALPKNLPDFFNVDISNLKIGDLVAVDTLKSDEFT 114 >gi|226355167|ref|YP_002784907.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus deserti VCD115] gi|259646682|sp|C1CZB5|RL25_DEIDV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226317157|gb|ACO45153.1| putative 50S ribosomal protein L25 (General stress protein CTC) [Deinococcus deserti VCD115] Length = 239 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 6/145 (4%) Query: 27 NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDP 85 G IPA+ Y N + AL K R + + T + + + G E + K Q+D Sbjct: 16 EGLIPAVAY-NKDNNISFALDRKAFD-RAFRQQSTTGLFDITVEGGETFPALVKTVQMDK 73 Query: 86 VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIP 144 IH DF V+ G + V VPV KS G GG +++V H +S++ P IP Sbjct: 74 RRRTPIHVDFYMVTYGEPIEVSVPVH--TTGKSQGEIMGGLVDIVLHNLSIVAPGPRRIP 131 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPE 169 +TVD++ L IGD I D++LPE Sbjct: 132 QELTVDVSRLNIGDHITAGDVKLPE 156 >gi|227504123|ref|ZP_03934172.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] gi|227199280|gb|EEI79328.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] Length = 211 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R++ GKG AR LR G++P ++YG+ D A+ +++ L + + + L Sbjct: 8 LKAEVRNEFGKGFARRLRVAGKVPGVVYGHAVDVLHFAVDRIELTA-LVRAHGVNAVFEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E V+ K + ++ + H D L + G V V VPV E +PG+ Sbjct: 67 ELEGEQHLVMVKHVDQNVLTLDIDHIDLLSIKRGEKVEVEVPVTLEGE-PAPGLMFIQDA 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V+ E +L NIP+ I+V + L+ G + DI LPE T+ ++ IA+I P Sbjct: 126 DVLLVEADVL----NIPEEISVSIEGLEDGAVVTAGDITLPEDTTLVADAETIIASISLP 181 >gi|313885342|ref|ZP_07819093.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] gi|312619448|gb|EFR30886.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] Length = 205 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 5/181 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KLSA +R + G +++ R+ G IP +YG + + + ++A++ + + K + Sbjct: 2 KLSAELRTETGTAASKRARRQGLIPVTMYGKDFETQSLLINAREF-EAILRKEGSNAVFE 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+ + V KD+Q + D +S + V +P+ + E + G Sbjct: 61 LETDGKTQTVWVKDFQKAALKSEFYSVDLEAISANQKLEVEIPLVLVGEESV----KVGI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + V + + PA+NIP S +D+ ++IGD+ + D+ +P + + + + TI ++ A Sbjct: 117 VETVINSILAEAPASNIPQSFELDVTGMEIGDTKAVSDLEVPSDVTVLLEADQTIVSVSA 176 Query: 187 P 187 P Sbjct: 177 P 177 >gi|53792263|dbj|BAD52896.1| hypothetical protein [Oryza sativa Japonica Group] Length = 381 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 17/159 (10%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + +++ +K I K L F+ Sbjct: 68 AVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFFL 127 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 128 SRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLMF 187 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDL 151 I E+ SPG+++G N + V LCPA+ +P I VDL Sbjct: 188 IGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDL 226 >gi|218295193|ref|ZP_03496029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] gi|218244396|gb|EED10921.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] Length = 205 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 10/184 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ + LR+ G++P ++Y N S + + + + K ++ + + + Sbjct: 2 EYRIKAYYREG---EKPQALRRAGKLPGVMY-NKSLNRKVYVDLSEFDK-VFRQASIHHV 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQ 123 + L++ V + + L+ H DF +S+ V ++VP+RF+ +P G+++ Sbjct: 57 IVLELPDGEVPTLVRQVNLNKRRRRPEHVDFFVLSD-EPVEMYVPLRFVG---TPVGVRE 112 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA Sbjct: 113 GGVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAINPEETIAA 172 Query: 184 IVAP 187 +V P Sbjct: 173 VVPP 176 >gi|189501903|ref|YP_001957620.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Amoebophilus asiaticus 5a2] gi|226736276|sp|B3ERN9|RL25_AMOA5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189497344|gb|ACE05891.1| hypothetical protein Aasi_0482 [Candidatus Amoebophilus asiaticus 5a2] Length = 196 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 91/171 (53%), Gaps = 11/171 (6%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYSKNF 60 K ++ R +GK +++ LR + Q+P ++YG P+A+ KD+ +Y+ Sbjct: 2 KTIEIIGYRRANLGKQASKQLRNDAQVPGVLYGGKEQVHFYTPMAI-LKDL---VYTPQ- 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TL++ + + I +D Q PV+++++H D LQ+ E + + +P+ + + +PG Sbjct: 57 -AYFVTLNLEGAIYNCILQDIQFHPVNEVILHIDLLQIFEDKQIKMDIPIVLVGD--APG 113 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 + +GG L ++S++ ++PD+I VD++ L +G + I+ T Sbjct: 114 VVKGGNLVHKKKKLSVVAYPKDMPDTIPVDISGLDVGQMTRVSHIKAENYT 164 >gi|296118204|ref|ZP_06836785.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] gi|295968762|gb|EFG82006.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] Length = 215 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF-MTTILT 66 + A R + GKG+AR LR+ GQ+P +IYG S+ +PI +A + +N+ +L Sbjct: 7 IKAQARTEFGKGAARRLRRAGQVPGVIYG--SNTEPIHFAADILELHSLIRNYGANAVLE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+I + + K + ++ + H D L + G V V VP+ + E +PG+ Sbjct: 65 LEIDGDQHLTMVKAIDQNVLTLDMDHLDLLSIKRGEKVEVEVPLTLVGE-PAPGLMFISD 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +V+ E +L NIP+ I V + L+ G + ++ LPE T+ ++ I +I Sbjct: 124 TDVLLVESDVL----NIPEEIEVSIEGLEDGTVVTAGEVNLPEGTTLIADPESPIVSISE 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|332971074|gb|EGK10044.1| 50S ribosomal protein L25 [Desmospora sp. 8437] Length = 223 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++ +R K + LR+ G++PA++YG + + I L A + K L + + I L Sbjct: 23 IAVTIRQKYPRSLLTKLRREGRVPAVVYGKGMENELIHLEAGQVIKMLQQEG-TSAIYEL 81 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 G + V+ ++ Q D + D +IH DF +V + V + E G+K+GG Sbjct: 82 QYPGGKSRQVMIRELQQDRIKDKIIHIDFNEVKLDEPIDTEVYIELTGE--PTGVKEGGI 139 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V + C ++PD + ++ L IGD++ ++ +P++ ++ +AT++ Sbjct: 140 LQHQLRSVEVRCLPADLPDRLEGEITHLAIGDTLTAAELPIPDRVELLTDPEEMVATVLP 199 Query: 187 P 187 P Sbjct: 200 P 200 >gi|329955544|ref|ZP_08296452.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] gi|328525947|gb|EGF52971.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] Length = 197 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 5/144 (3%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 + +RK+ +P ++YG + + A+ + +Y+ + L +D GK+ V+ I KD Sbjct: 25 KAIRKDNGVPCVLYG-AGENVHFTVPAEGLRNLVYTPHIYVVDLIID-GKK-VNAILKDI 81 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N Sbjct: 82 QFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGLAEGVKAGGKLTLQMRKLKVKALYN 139 Query: 142 NIPDSITVDLNDLKIGDSIHMEDI 165 IP+ + ++++ L +G ++ + ++ Sbjct: 140 AIPEKLIINVSHLGLGKTVKVGEL 163 >gi|154174063|ref|YP_001408881.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter curvus 525.92] gi|112803724|gb|EAU01068.1| ribosomal protein L25, Ctc-form [Campylobacter curvus 525.92] Length = 178 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 6/166 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K T + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKE--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G ++ +V+ DYQ D V++ L H D G +PV N +P G+K G Sbjct: 60 KVGGKVYNVVIVDYQRDVVTNDLKHVDLKVALPGVLSKYMIPV---NPIGTPVGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 L + + C A N+P+S +D++ L + D+I + DI P S Sbjct: 117 LIQSKRRLCVKCTAENLPNSFDIDVSKLDVDDTILVRDITAPAGVS 162 >gi|329961417|ref|ZP_08299540.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] gi|328531894|gb|EGF58717.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] Length = 196 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 5/146 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + + +RK+ +P ++YG + + + + +Y+ + L +D GK+ V+ I K Sbjct: 23 ALKAIRKDNGVPCVLYG-AGENVHFTVPVEGLRNLIYTPHIYVVDLIID-GKK-VNAILK 79 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + Sbjct: 80 DIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLTLQMRKLKVKAL 137 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 N IP+ +TV++ L +G ++ + ++ Sbjct: 138 YNLIPEKLTVNVAHLGLGKTVKVGEL 163 >gi|315656085|ref|ZP_07908976.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493087|gb|EFU82687.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 208 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R GKG AR R +IPA++YG+ +DP + L D L K+ +++L + Sbjct: 12 RTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTF--LLVKDNPNAVISLKGLEN 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV ++H D L V V V VP+ I E S + LN Sbjct: 70 PAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMSGLVANQDLLN---- 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ AP Sbjct: 126 -MEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAAP 179 >gi|308809493|ref|XP_003082056.1| putative protein (ISS) [Ostreococcus tauri] gi|116060523|emb|CAL55859.1| putative protein (ISS) [Ostreococcus tauri] Length = 218 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 9/172 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPI-ALSAKDISKRLYSKNFMTT-- 63 +L+ R GKG A R+ G++PA+++ S K + S ++++ + T Sbjct: 23 RLTCETRAGTGKGIAGRTRREGRVPAVLFRPGSVEKTLLTASERELNAAVRRHTLAGTQC 82 Query: 64 -ILTLDIGK-----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + L++ +V + K + + + + FL+V + V V VPV + E+ Sbjct: 83 EVFELEVTDGDGTPRIVRALAKQVHMHAYNKSVENVCFLEVEPETEVRVRVPVETLGEDV 142 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 SPG+K+GG + ++ V + C +++IP TVD++ L G I + D+++ E Sbjct: 143 SPGVKRGGFVQILRKTVPVKCRSDSIPKKFTVDVSALDAGKIIRIRDVKVAE 194 >gi|257057204|ref|YP_003135036.1| 50S ribosomal protein L25P [Saccharomonospora viridis DSM 43017] gi|256587076|gb|ACU98209.1| LSU ribosomal protein L25P [Saccharomonospora viridis DSM 43017] Length = 212 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 12/186 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+ R + GKG+AR R+ G+IPA++YG SDP+ +AL A + + R+ ++ T+ Sbjct: 3 EVRLTVEPRTEFGKGAARRTRRAGKIPAVLYGPGSDPRHLALPAIEFA-RVLREHGQNTV 61 Query: 65 LTLDI-----GKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +TLDI G++ + +P+ + P+ + + H D L V G V V VPV ++ Sbjct: 62 ITLDIDSNGNGEKASEMALPRAVAVHPLKNYIEHVDLLIVKRGEKVVVDVPVVLTGQS-G 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 PG +L+ + + L ++PD + V + G I + LP +S Sbjct: 121 PGTLVTQELDAIQVQAEAL----SLPDQLEVSVEGATAGTQITAAQVALPAGAELVSDPE 176 Query: 179 ITIATI 184 + IA + Sbjct: 177 LLIAVV 182 >gi|239907580|ref|YP_002954321.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] gi|259646684|sp|C4XHR1|RL25_DESMR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239797446|dbj|BAH76435.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] Length = 192 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 3/174 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R +GKG+ R LR + +P + Y P+ + + K LYSK + + L Sbjct: 7 LAVKTRAGLGKGACRKLRADDMVPGVYYDAKGVNVPVMVEHLPLQK-LYSKIASSHVFDL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I E + + P + H DF V + V VPV + KS G +GG+L Sbjct: 66 QIEGETKPALVWKVEHHPTKPRITHVDFYGVDLTKEIQVRVPVEVVG--KSKGQVKGGQL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + +LC IPD I +D+ ++ I +SI + D+ LPE ++ N + Sbjct: 124 EIHREFIEVLCLPLVIPDKIVLDITNVDINESILIADVVLPEGVKAVYDNNYAV 177 >gi|157163952|ref|YP_001466456.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter concisus 13826] gi|112801679|gb|EAT99023.1| ribosomal protein L25, Ctc-form [Campylobacter concisus 13826] Length = 178 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K + + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G ++ +V+ DYQ D V+ L H D G +PV+ + +P G+K G Sbjct: 60 KVGGKVYNVVIVDYQRDVVTSDLKHVDLKVALPGVLSKYMIPVKPVG---TPIGLKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + C A N+P+S VD++ L I D+I + DI P+ Sbjct: 117 LIQSKRRLCVKCTAENLPNSFDVDVSKLDIDDTILVRDITAPK 159 >gi|319901552|ref|YP_004161280.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] gi|319416583|gb|ADV43694.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] Length = 196 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 5/146 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + + +RK+ +P ++YG + + A+ + +Y+ + L +D GK+ V+ I K Sbjct: 23 ALKAIRKDNGVPCVLYGGGENIH-FTVPAEGLRNLVYTPHIYVVDLIID-GKK-VNAILK 79 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + Sbjct: 80 DIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGLAEGVKAGGKLTLQMRKLKVKAL 137 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 N IP+ + V++ L +G ++ + ++ Sbjct: 138 FNLIPEKLVVNVAHLGLGKTVKVGEL 163 >gi|167762594|ref|ZP_02434721.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] gi|167699700|gb|EDS16279.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] Length = 197 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 5/144 (3%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 + +RK+ +P ++YG + + A+ + +Y+ + L +D GK+ V+ I KD Sbjct: 25 KAIRKDNGVPCVLYG-AGENVHFTVPAEGLRNLVYTPHIYVVDLIID-GKK-VNAILKDI 81 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + N Sbjct: 82 QFHPVKDTILHVDFYQIDETKPIVMEVPVQM--EGLAEGVKAGGKLTLQMRKLKVKALYN 139 Query: 142 NIPDSITVDLNDLKIGDSIHMEDI 165 IP+ + V+++ L +G ++ + ++ Sbjct: 140 AIPEKLIVNVSHLGLGKTVKVGEL 163 >gi|87162737|gb|ABD28532.1| Ribosomal protein L25 [Medicago truncatula] gi|217072210|gb|ACJ84465.1| unknown [Medicago truncatula] Length = 266 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 22/178 (12%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY----GNMS-DPKPIALSAKDISK---RLYSKNFM 61 A+ R GK + RK G++P+I++ G++ + + I++ + I K L F+ Sbjct: 56 AIPRKDSGKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFL 115 Query: 62 TTILTLDIGKEL--------------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVH 107 + + L + + V V+P+ L +D ++ F++ + + V Sbjct: 116 SRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVD 175 Query: 108 VPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 VP+ F ++ SPG+K+G LN + V LCPA+ IP I VDL++L +G + M D+ Sbjct: 176 VPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDL 233 >gi|89898001|ref|YP_515111.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila felis Fe/C-56] gi|109893353|sp|Q255S2|RL25_CHLFF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89331373|dbj|BAE80966.1| 50S ribosomal protein L25 [Chlamydophila felis Fe/C-56] Length = 185 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 3/164 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---SKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA+IY I + A SK L S +TI +L ++ + KD Sbjct: 19 IRQTGGIPAVIYSGGKSVANIVVDAHVFSKFLSGLESGALSSTIFSLSYEGRIIRALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q + +IH DF ++ E V +++P+R IN G+K GG L V + ++C Sbjct: 79 IQYQVTTYQVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVKLGGSLRQVIRALRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +I + +D+ L + + + DI +P ++ L + T+ Sbjct: 139 KDIVPFLELDVRSLGLSQTRKLSDINIPAGLRPITPLKEVVVTV 182 >gi|269302741|gb|ACZ32841.1| ribosomal protein L25, Ctc-form [Chlamydophila pneumoniae LPCoLN] Length = 185 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKNFMTT 63 +L R+ K + +R+ G IPA++Y ++++ AL K L S +T Sbjct: 2 ELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSST 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 62 VFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVKL 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG L V V ++C +I + +D+ + + + + DI++P E + + ++ IT Sbjct: 122 GGSLRQVIRAVRVVCKPKDIVPFLELDVQSVGLSQTRKLSDIKIPAGIETITPLKEVAIT 181 Query: 181 IA 182 ++ Sbjct: 182 VS 183 >gi|15836482|ref|NP_301006.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae J138] gi|16752081|ref|NP_445447.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|33242317|ref|NP_877258.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae TW-183] gi|12644491|sp|Q9Z6V7|RL25_CHLPN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7189823|gb|AAF38695.1| general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|8979323|dbj|BAA99157.1| general stress protein [Chlamydophila pneumoniae J138] gi|33236828|gb|AAP98915.1| general stress protein [Chlamydophila pneumoniae TW-183] Length = 185 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKNFMTT 63 +L R+ K + +R+ G IPA++Y ++++ AL K L S +T Sbjct: 2 ELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSST 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 62 VFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVKL 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG L V V ++C +I + +D+ + + + + DI++P E + + ++ IT Sbjct: 122 GGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAIT 181 Query: 181 IA 182 ++ Sbjct: 182 VS 183 >gi|256545294|ref|ZP_05472658.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] gi|256398975|gb|EEU12588.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] Length = 215 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 3/160 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L++ R+ VGK LR+ +P ++Y + + +++D K L S+ TTI+ L Sbjct: 6 LNSEKREAVGKNKVNKLRQQAIVPGVVYAKDKENINVQFTSRDFEKVL-SQAGTTTIIDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI E V V+ KDYQ+ P H DF ++ + V VPV ++N ++ + Sbjct: 65 DIDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPV-YLNGRDDIRVEPSVLV 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + V + C IP +++ D++IGDS + D + Sbjct: 124 QNI-DSVEVECLPMYIPQYAELEVTDMQIGDSFTVADFDI 162 >gi|332659386|gb|AEE84786.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 277 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 29/187 (15%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKNFM 61 AV R GK + RK G++P+II+ + + + I++ I K L F+ Sbjct: 56 AVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFL 115 Query: 62 TTILTLDIGKEL--------VHVIPKDYQ-------------LDPVSDILIHADFLQVSE 100 + + +++ E+ V +P+ + L +D ++ F++ Sbjct: 116 SRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPP 175 Query: 101 GSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 G+ + V +P+ FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + Sbjct: 176 GALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKL 235 Query: 161 HMEDIRL 167 M D+++ Sbjct: 236 VMGDLKV 242 >gi|330443834|ref|YP_004376820.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] gi|328806944|gb|AEB41117.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] Length = 185 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%) Query: 10 AVMRDKVGKGSA-RLLRKNGQIPAIIYGNMSDPKPI---ALSAKDISKRLYSKNFMTTIL 65 V R + GK S + +R+ G IPA++Y + I AL K L S +T+ Sbjct: 4 VVTRRETGKKSFLKKIRQTGGIPAVVYSSGKSIANITVDALVFKKFLSSLESGALSSTVF 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+ ++ + KD Q + + H DF ++ E V + +PVR +N G+K GG Sbjct: 64 FLEYEGRVIKALVKDIQYQVTTYEVSHLDFEELVENRPVKLSIPVRCVNTVDCIGVKLGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK---TSSMSQLNITIA 182 L V + ++C +I + +D+ L + + + DI +PE SS+ ++ +T++ Sbjct: 124 SLRQVIRAIRVVCLPKDIVPFLELDVQSLGLSQTRKLSDIVIPEGIKPISSLREVAVTVS 183 >gi|15805454|ref|NP_294150.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus radiodurans R1] gi|28948939|pdb|1NKW|T Chain T, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans gi|51247392|pdb|1SM1|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin gi|66361038|pdb|1YL3|V Chain V, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4. gi|88192275|pdb|2B66|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400 gi|88192338|pdb|2B9N|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf2, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400. gi|88192393|pdb|2B9P|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site. This File Contains The 50s Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site And Is Described In Remark 400. gi|6458107|gb|AAF10004.1|AE001902_4 general stress protein Ctc, putative [Deinococcus radiodurans R1] Length = 253 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 6/160 (3%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 I A+ Y N + AL K R + + T + + + G E + K Q+D Sbjct: 35 IAAVAY-NKENNVSFALDRKAFD-RAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKR 92 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIPDSI 147 IH DF V+ G V V VPV +S G QGG +++V H + ++ P IP + Sbjct: 93 APIHVDFYMVTYGEPVEVSVPVH--TTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQEL 150 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD+ + IGD I DI+LPE + + +T+ +++ P Sbjct: 151 VVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPP 190 >gi|227876326|ref|ZP_03994439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269976098|ref|ZP_06183097.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|306817217|ref|ZP_07450964.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] gi|227843099|gb|EEJ53295.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269935691|gb|EEZ92226.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|304650019|gb|EFM47297.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] Length = 208 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG AR R N QIPA++YG+ +DP + L D L K+ +++L+ K+ Sbjct: 12 RTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTF--LLVKDNPNAVISLEGLKK 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV L+H D L V V V VPV + E P + L+++ Sbjct: 70 PAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGE---PAVGTVANLDLL-- 124 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +L P +IP++I V+++ ++ G+ + + +++LP +++ + ++ P Sbjct: 125 HVEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETVVLSVAVP 179 >gi|301166403|emb|CBW25979.1| 50S ribosomal protein L25 [Bacteriovorax marinus SJ] Length = 204 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 + +RK G +P ++YG + + + I K L+ + + GK LV + + Sbjct: 15 KAIRKEGYVPGVVYGKGIESVNFKVPSIAIRKFLHHSGKVFEVEVAGRGKHLVSL--DNV 72 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q D + D ++H F ++S TV +P+ F E ++ G K+GG ++ V HEV + Sbjct: 73 QWDHMGDRMLHVSFHKISANEKTTVTLPIHF--EGEAAGKKEGGVVHHVLHEVEVTGLPG 130 Query: 142 NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +IP+ I+VD+ L + ++DI P+ + + + P Sbjct: 131 DIPEFISVDITALGMHGHFSLKDIPCPKGLEWAHDVEANVVSCHPP 176 >gi|45477205|sp|Q9RX88|RL25_DEIRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28948894|pdb|1NJM|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) And The Antibiotic Sparsomycin gi|28948900|pdb|1NJP|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) gi|29726807|pdb|1NWX|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 gi|29726838|pdb|1NWY|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin gi|61680355|pdb|1XBP|T Chain T, Inhibition Of Peptide Bond Formation By Pleuromutilins: The Structure Of The 50s Ribosomal Subunit From Deinococcus Radiodurans In Complex With Tiamulin gi|190613508|pdb|2ZJP|S Chain S, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613538|pdb|2ZJQ|S Chain S, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613569|pdb|2ZJR|S Chain S, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613676|pdb|3CF5|S Chain S, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282475|pdb|3DLL|S Chain S, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714559|pdb|3PIO|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714589|pdb|3PIP|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit Length = 237 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 6/160 (3%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 I A+ Y N + AL K R + + T + + + G E + K Q+D Sbjct: 19 IAAVAY-NKENNVSFALDRKAFD-RAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKR 76 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIPDSI 147 IH DF V+ G V V VPV +S G QGG +++V H + ++ P IP + Sbjct: 77 APIHVDFYMVTYGEPVEVSVPVH--TTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQEL 134 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD+ + IGD I DI+LPE + + +T+ +++ P Sbjct: 135 VVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPP 174 >gi|331268280|ref|YP_004394772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329124830|gb|AEB74775.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 192 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 8/164 (4%) Query: 24 LRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQ 82 LR+NGQ+P I+YG ++ PI ++ + R+ N +IL L + + + + K+ Q Sbjct: 20 LRRNGQVPCIMYGEHLEKAIPIKVNYNQLI-RILKTNSKGSILKLQLNNQTKNCVIKEIQ 78 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK--LNVVCHEVSLLCPA 140 D V+ +IH DF VS+ + + +P+ F +K Q + L E+ + Sbjct: 79 KDTVTGKIIHIDFQNVSKDEIIKMTIPIEFTGIDKL----QSKRLILETFITEIDMQGKV 134 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 IP++I +D + + + + + DI+LPE +S N +A I Sbjct: 135 QEIPETIKIDASKMNFNNKLFIHDIKLPEGIRLLSDPNALVAVI 178 >gi|307701513|ref|ZP_07638531.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] gi|307613305|gb|EFN92556.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] Length = 208 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 7/175 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG AR R N QIPA++YG+ +DP + L D L K+ +++L+ K+ Sbjct: 12 RTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTF--LLVKDNPNAVISLEGLKK 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ KD Q PV L+H D L V V V VPV + E P + L+++ Sbjct: 70 PAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGE---PAVGTVANLDLL-- 124 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +L P +IP++I V+++ ++ G+ + + +++LP +++ + ++ P Sbjct: 125 HVEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETVVLSVAVP 179 >gi|300781623|ref|ZP_07091477.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] gi|300533330|gb|EFK54391.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] Length = 228 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R++ GKG++R LR G++P ++Y + D + +IS L + IL L Sbjct: 6 IKAEKREEFGKGASRRLRAAGRVPGVLYSSGEDNLHFHVDILEISA-LVRNDGTNAILEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI E + K+ + ++ + H D L V G V V VPV + E + + +L Sbjct: 65 DIDGEKNLAMVKNIDQNVLTLNIDHIDLLGVKRGEKVNVEVPVTYEGEAAADAVVL-QEL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +VV EV L IPD I V + +IGD I D++LPE ++ Sbjct: 124 DVVEIEVEAL----KIPDEIIVSIEGKEIGDQIFASDLQLPEGAELLT 167 >gi|167561485|ref|ZP_02354401.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis EO147] gi|167568715|ref|ZP_02361589.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis C6786] Length = 167 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 44 IALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 I L + L + F ++IL L++ + V+ +D Q P +++H DF +V Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKK 61 Query: 104 VTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + VP+ F+N SP +K ++ V E+ + C +P+ + VDL+ ++ G S+H Sbjct: 62 LHTKVPLHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHA 121 Query: 163 EDIRLP 168 +DI LP Sbjct: 122 KDIALP 127 >gi|226309687|ref|YP_002769581.1| 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] gi|226092635|dbj|BAH41077.1| probable 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] Length = 202 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 7/162 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R+K + ++LR G +P I+YG+ KPI + +++ L ++ Sbjct: 3 QLQAQSREKKTGNAVKVLRNEGWVPGIMYGSEVGNKPIQVKGRELDAALRQQS-TNKPFR 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + V+ + Q P+ ++HADF +++ + VPV G + G Sbjct: 62 LSVDGNTHDVMVYELQRHPLQGNILHADFKKINMNEKIHTSVPVLMT------GDPELGV 115 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +V H V + C NIP+S VD++ IGD + + D+ +P Sbjct: 116 ATLVRHSVEVTCLPGNIPESFLVDVDGFNIGDVVLVGDLTVP 157 >gi|15618858|ref|NP_225144.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae CWL029] gi|4377274|gb|AAD19087.1| General Stress Protein [Chlamydophila pneumoniae CWL029] Length = 185 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKNFMTT 63 +L R+ K + +R+ G IPA++Y ++++ AL K L S +T Sbjct: 2 ELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSST 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + +L ++ + KD Q + +IH DF ++ E + +++P+R IN G+K Sbjct: 62 VFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPIKLNIPIRCINAVDCIGVKL 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP---EKTSSMSQLNIT 180 GG L V V ++C +I + +D+ + + + + DI++P E + + ++ IT Sbjct: 122 GGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAIT 181 Query: 181 IA 182 ++ Sbjct: 182 VS 183 >gi|291296896|ref|YP_003508294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] gi|290471855|gb|ADD29274.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] Length = 206 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R G LR G++P ++Y + K + + K+ +K + I Sbjct: 2 EYRIKAQTR---GNEKPAALRDAGKLPGVVYNRQENYK-VVVDLKEFNKVFLAAGIHHVI 57 Query: 65 -LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L L+ GK V + + LD H DF +S+ V + +P++ E + G+++ Sbjct: 58 TLELENGK-TVDTLVRQVNLDKRRRRPDHVDFYALSD-EPVLMWIPIKI--EGTAQGVRE 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L +V ++V + IP I VD++ L+IGDSIH ++RLP + + TI Sbjct: 114 GGVLQLVNNDVQVKVSPKAIPPHIEVDVSHLRIGDSIHANELRLPPGVTLAMNPSDTIVA 173 Query: 184 IVAP 187 IV P Sbjct: 174 IVPP 177 >gi|189467496|ref|ZP_03016281.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] gi|189435760|gb|EDV04745.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] Length = 196 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 79/148 (53%), Gaps = 5/148 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + + +RK+ +P ++YG + + A + +Y+ + L +D GK+ ++ I K Sbjct: 23 ALKAIRKDNGVPCVLYG-AGENIHFTVPADGLRNLVYTPHIYVVDLVID-GKK-INAIMK 79 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D Q PV D ++H DF Q+ E + + VPV+ E + G+K GGKL + ++ + Sbjct: 80 DIQFHPVKDTILHVDFYQIDESKPIVMEVPVQM--EGLAEGVKAGGKLVLQMRKLKVKAL 137 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRL 167 N IP+ +T+++ L +G ++ + ++ Sbjct: 138 YNVIPEKLTINVAHLGLGKTVKVGELSF 165 >gi|269926740|ref|YP_003323363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] gi|269790400|gb|ACZ42541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] Length = 205 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 13/172 (7%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R+ VG+ S LRK G +PAI+YG DP P+ ++A++ L + Sbjct: 1 MTQENFTIKASKRELVGR-SLNTLRKQGFVPAIVYGYGIDPTPVQVNAREFEHTL-KRAG 58 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE---- 115 T+++ L I + V V +D Q+ PV ++HADF V+ + VP+ + E Sbjct: 59 RTSLIDLQIDDSQTVKVFIQDVQVHPVKLNILHADFHAVNLEEEIETEVPIVLVGEPAAI 118 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIR 166 + G+ Q G +++ +IP I +++ DL +I +I++ DI+ Sbjct: 119 RNNIGVLQRG-----LESLTVRAKPADIPHEIEINVEDLAEIDQTIYVADIK 165 >gi|167835375|ref|ZP_02462258.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis MSMB43] Length = 167 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 5/128 (3%) Query: 44 IALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKK 61 Query: 104 VTVHVPVRFINENKSPGIKQGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSI 160 + VP+ F+N SP +K VV H E+ + C ++P+ + VDL+ ++ G S+ Sbjct: 62 LHTKVPLHFLNAETSPAVKLSSA--VVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSL 119 Query: 161 HMEDIRLP 168 H++DI LP Sbjct: 120 HVKDIALP 127 >gi|116332055|ref|YP_801773.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280213|sp|Q04Q05|RL25_LEPBJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116125744|gb|ABJ77015.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 212 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K++ R + GK LR +G IP I G A++ K+++K ++S +T++ Sbjct: 8 KIAVKKRTETGKNENNRLRSSGMIPVNIIG-AGVATSGAVNEKELAKMVHSGIRQSTLIE 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ G+ V K+ Q P D + H DF +V G + + + K G K GG Sbjct: 67 LDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGVAK--GSKTGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ + ++ +++T+D+ DL +GDSI + +++P Sbjct: 125 QFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVP 167 >gi|116327330|ref|YP_797050.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284866|sp|Q054X8|RL25_LEPBL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116120074|gb|ABJ78117.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 212 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K++ R + GK LR +G IP I G A++ K+++K ++S +T++ Sbjct: 8 KIAVKKRTETGKNENNRLRSSGMIPVNIIG-AGVATSGAVNEKELAKMVHSGIRQSTLIE 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ G+ V K+ Q P D + H DF +V G + + + K G K GG Sbjct: 67 LDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGVAK--GSKTGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + HE+ + ++ +++T+D+ DL +GDSI + +++P Sbjct: 125 QFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVP 167 >gi|282881840|ref|ZP_06290493.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] gi|281298332|gb|EFA90775.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] Length = 210 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 11/185 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA-KDISKRLYSKNFMTTIL 65 KLS+ R + GK LR G +P +IYG D +P+ +S +++ +L+ + + I+ Sbjct: 5 KLSS--RKEHGKNQVDKLRAEGIVPGVIYG--KDREPLNVSGHENVILKLFQEVGTSVII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ IK Q Sbjct: 61 EVEIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDE---IKVQP 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIA 182 L V +EV + C +P + V++ D++IGD+I + D+ + E + + +A Sbjct: 118 SNLIQVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALEADEVVA 177 Query: 183 TIVAP 187 T+ AP Sbjct: 178 TLSAP 182 >gi|331694719|ref|YP_004330958.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] gi|326949408|gb|AEA23105.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] Length = 216 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++ A R + GKG+AR R+ G+IPA++YG+ +DP+ ++L + + + R+ + + Sbjct: 3 QARIDAETRTEFGKGAARRTRRAGKIPAVLYGHGTDPQHLSLPSLEFA-RVVREQGRNAV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++IG + K + P+ + H D L + G V V V V E + G Sbjct: 62 LEINIGGTPQLALTKTVVVHPIRPYIEHVDLLVIKRGEKVVVDVQVVVTGEAAA-GSMIA 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +LN + E +L +IP+SI + + D++IG I + LP+ + + + + Sbjct: 121 QELNTIEVEADVL----SIPESIELSVQDVEIGTQILAGSVALPDGVTLQTDPEALVVNV 176 Query: 185 VA 186 VA Sbjct: 177 VA 178 >gi|261749230|ref|YP_003256915.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497322|gb|ACX83772.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 209 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 89/169 (52%), Gaps = 4/169 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 +GK +R +G++P I+YG + P + S + K +Y+ + ++ ++ + Sbjct: 13 IGKKFIETIRLSGEVPCILYGKDINI-PFSTSLETFKKLVYTPELYWVSIQIEGEEKNIK 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 + K+ Q DP+S+ ++HADF ++ + + + +P++ + G+ +GG+ ++ Sbjct: 72 AVKKEIQFDPISEKILHADFCKIEDCKPMILEIPIKTF--GRPIGVSKGGEYYSPIRKLK 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + ++ P I +D+ L IGD I ++D+ L ++ + + LN +A + Sbjct: 130 VKAFPSSFPKYIKLDVQSLDIGDRITVKDL-LKKEYNILHPLNTLVARV 177 >gi|29840577|ref|NP_829683.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila caviae GPIC] gi|71153132|sp|Q821W5|RL25_CHLCV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29834927|gb|AAP05561.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila caviae GPIC] Length = 185 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 3/164 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA+IY I + A K L S +TI +L + + KD Sbjct: 19 IRQTGGIPAVIYSGGKSLANIVVDAHVFGKFLSSLESGALSSTIFSLSYEGRTIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q S +IH DF ++ E V +++P+R IN G+K GG L V + ++C Sbjct: 79 IQYQVTSYRVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVKLGGSLRQVIRAMRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +I + +D+ L + + + DI +P ++ L + T+ Sbjct: 139 KDIVPCLELDVRSLGLSQTRKLADINIPAGLRPITPLKEVVVTV 182 >gi|62185394|ref|YP_220179.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila abortus S26/3] gi|81312456|sp|Q5L563|RL25_CHLAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|62148461|emb|CAH64231.1| putative 50S ribosomal protein L25 [Chlamydophila abortus S26/3] Length = 185 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 3/148 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKELVHVIPKD 80 +R+ G IPA+IY I + A SK L S +TI +L + + KD Sbjct: 19 IRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSSTIFSLSYEGRTIKALVKD 78 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q S +IH DF ++ E V + +P+R IN G+K GG L V + ++C Sbjct: 79 IQYHVTSYRVIHLDFEELIEDRDVKLKIPIRCINAVDCVGVKLGGSLRQVIRALRVVCKP 138 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLP 168 +I + +D+ L + + + DI++P Sbjct: 139 KDIVPYLELDVRSLGLSQTRKLSDIQIP 166 >gi|322379486|ref|ZP_08053852.1| 50S ribosomal protein L25 [Helicobacter suis HS1] gi|322380467|ref|ZP_08054666.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321147112|gb|EFX41813.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321148093|gb|EFX42627.1| 50S ribosomal protein L25 [Helicobacter suis HS1] Length = 180 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 88/181 (48%), Gaps = 10/181 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK---NFMTTI 64 L +R ++ K + +RK G + A +YG + D + + K +FM Sbjct: 4 LEGEIRGELSKSERKAVRKQGMLLANLYGRKTPNVYATFKINDFIRFVKHKPNLDFM--- 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + IG+ +V+ + YQ DP+S+ L+H D + + +G ++PV+ + GIK Sbjct: 61 --VKIGENAYNVVIQSYQKDPISNTLMHVDLMVLQKGVKSKFYIPVKI--HGVAVGIKNK 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + H + + C ++ + +D+++L +GD+I + D+++P + N + + Sbjct: 117 GILMLSKHRIHVECTPEHLFSNFDLDVSNLDVGDAILVRDLQIPAHVKVLENPNNAVVGV 176 Query: 185 V 185 + Sbjct: 177 I 177 >gi|320354572|ref|YP_004195911.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] gi|320123074|gb|ADW18620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] Length = 185 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + + +R GKG R LR PA +Y + + + + K L + + Sbjct: 3 QVNVESSVRTVFGKGPMRQLRMQSITPANLYSGGNKSVSLQVETAKLYKSLLFIHGRNAV 62 Query: 65 LTLDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +TL I K HV+ ++ Q PV+ L+H DFL++ VPV ++ K G+ Sbjct: 63 ITLKIEGDDKGERHVLVQEIQKAPVTGSLLHVDFLEIDLNKAAKFTVPVEYVGTAK--GV 120 Query: 122 KQGGKLNVVCHEVSLL-CPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQ 176 GG+L V V L CP +IPD I VD+ L+ G + I D+ LPEK + + Sbjct: 121 DLGGELQVFRDSVQLRGCPL-DIPDVIQVDITPLEQGGAGITYGDLPLPEKVEMLEK 176 >gi|313887551|ref|ZP_07821234.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846429|gb|EFR33807.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] Length = 211 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 3/153 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD GK LR NG+IP ++Y + + ++ KD+ K YS+ + I +DI E Sbjct: 8 RDAKGKNKVDKLRANGEIPGVLYSKGKEARMVSGLEKDLLKA-YSQEGYSNIFDIDIDGE 66 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V+ K+ Q+ + + ++H D ++ + ++V VP+ + E + Q L V + Sbjct: 67 TTSVLFKEVQMHHIKNAMVHFDLYEIDMNTEISVEVPI--VLEGRDEVKVQPSSLIQVLN 124 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 EV++ C +P V++ +++IG++ + D+ Sbjct: 125 EVTVTCLPKYLPSEAIVNVVEMQIGETKTIADL 157 >gi|297572063|ref|YP_003697837.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] gi|296932410|gb|ADH93218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] Length = 193 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 7/162 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R + GKG+AR LR+ ++P ++YG+ +P + L + L + +L++ Sbjct: 5 LKADIRKEFGKGAARRLRREEKLPGVLYGHEEEPMHLELDYH--TTFLAVRGNANALLSI 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E I KD Q +P+S ++ H D L+V +G V V VPV E I L Sbjct: 63 EVEGEKHLAIVKDVQRNPLSRLIEHIDLLRVKKGEKVDVEVPVVVEGEPAGDAIATVELL 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V+ PA IP++ITV++ L+ G + + D++LPE Sbjct: 123 QVMAK-----APAIAIPEAITVNVEGLEEGTHVTVADLKLPE 159 >gi|315226512|ref|ZP_07868300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] gi|315120644|gb|EFT83776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] Length = 223 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N ++ + Sbjct: 23 LEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN---ALIEI 79 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GKE + ++ Q +PV + H DF +V G V V G +G + Sbjct: 80 KYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEV------EVPVFVEGTPKGAAV 133 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V + + +N+P+SIT++++ + G+ + +D+ LP+ Sbjct: 134 AFVDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQ 176 >gi|294786876|ref|ZP_06752130.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] gi|294485709|gb|EFG33343.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] Length = 206 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N ++ + Sbjct: 6 LEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN---ALIEI 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GKE + ++ Q +PV + H DF +V G V V G +G + Sbjct: 63 KYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEV------EVPVFVEGTPKGAAV 116 Query: 128 NVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V + + +N+P+SIT++++ + G+ + +D+ LP+ Sbjct: 117 AFVDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQ 159 >gi|300814301|ref|ZP_07094573.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511568|gb|EFK38796.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 211 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 11/185 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA-KDISKRLYSKNFMTTIL 65 KLS+ R + GK LR G +P +IYG D +P+ +S +++ +L+ + + I+ Sbjct: 5 KLSS--RKEHGKNQVDKLRAEGIVPGVIYG--KDREPLNVSGHENVILKLFQEVGTSVII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ IK Q Sbjct: 61 EVEIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDE---IKVQP 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI--TIA 182 L V +EV + C +P + V++ D++IGD+I + D+ + + + L+ +A Sbjct: 118 SNLIQVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALDADEVVA 177 Query: 183 TIVAP 187 T+ AP Sbjct: 178 TLSAP 182 >gi|24216520|ref|NP_714001.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45656329|ref|YP_000415.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|71153147|sp|Q72V72|RL25_LEPIC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153148|sp|Q8EZN1|RL25_LEPIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|24197831|gb|AAN51019.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45599563|gb|AAS69052.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 212 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPA-IIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++ R GK LR +G +P II G ++ A++ K++ K ++S +T++ Sbjct: 8 KIAVKKRTTTGKNENNRLRSSGMVPVNIIGGGVATSG--AVNEKELEKMVHSGIRQSTLI 65 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LD+ G+ V K+ Q P D + H DF +V G + + + K G K G Sbjct: 66 ELDVEGQGAQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGIAK--GSKTG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 G+ + HE+ + ++ +++T+D+ DL +GDSI + +++P Sbjct: 124 GQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVP 167 >gi|227499767|ref|ZP_03929867.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] gi|227218153|gb|EEI83419.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] Length = 215 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ GK LR N +P +IY + + ++A+D K L +TI+TL Sbjct: 6 LQAQKREATGKNKVNKLRANELVPGVIYAKDEENINVQVTARDFEKVLRQAG-TSTIITL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI E V+ K YQ P + +H DF +++ + V VPV + + + + L Sbjct: 65 DIDGENKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLV--GRDDIVVEPSVL 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 V + C IP + V++ DL+IGD Sbjct: 123 VQNIDVVEVECLPKFIPQTAEVEVKDLQIGD 153 >gi|145222529|ref|YP_001133207.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium gilvum PYR-GCK] gi|315442977|ref|YP_004075856.1| 50S ribosomal protein L25P [Mycobacterium sp. Spyr1] gi|145215015|gb|ABP44419.1| LSU ribosomal protein L25P [Mycobacterium gilvum PYR-GCK] gi|315261280|gb|ADT98021.1| LSU ribosomal protein L25P [Mycobacterium sp. Spyr1] Length = 223 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R GKG++R R+ G++P ++YG+ +DP+ + L +D + L +LTL Sbjct: 9 LTAQVRSTTGKGASRRARREGRVPVVLYGHGTDPQHLELDGRDFAAVLRHAG-TNAVLTL 67 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + K ++ P+ + HAD L V +G VTV V V E +PG Sbjct: 68 DIDGTEQLALTKAIEIHPIRRNIQHADLLVVRKGEKVTVEVTVIVEGE-AAPGTLVTQDA 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 NVV E + +IP+ TV + + G I I LP + ++ + +VA Sbjct: 127 NVVEIEADV----QSIPEQFTVSVEGAEEGTQILAGQIELPSGVTLIADPETLVVNVVA 181 >gi|46199527|ref|YP_005194.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB27] gi|55981558|ref|YP_144855.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB8] gi|62287407|sp|Q5SHZ1|RL25_THET8 RecName: Full=50S ribosomal protein L25; Short=TL5 gi|71153670|sp|Q72IA7|RL25_THET2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116668257|pdb|2J01|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668318|pdb|2J03|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|119389755|pdb|2HGJ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. gi|119389812|pdb|2HGQ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. gi|119389868|pdb|2HGU|Y Chain Y, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgr. gi|149240905|pdb|1VSA|T Chain T, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|157836540|pdb|2V47|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836596|pdb|2V49|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|160285447|pdb|1VSP|T Chain T, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156539|pdb|3D5B|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156593|pdb|3D5D|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938876|pdb|2JL6|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938934|pdb|2JL8|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit. gi|218766816|pdb|3F1F|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766872|pdb|3F1H|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887455|pdb|2WDI|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887487|pdb|2WDJ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887544|pdb|2WDL|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887601|pdb|2WDN|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823587|pdb|2WH2|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823646|pdb|2WH4|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100031|pdb|3HUX|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100087|pdb|3HUZ|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824545|pdb|2WRJ|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824607|pdb|2WRL|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824666|pdb|2WRO|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824725|pdb|2WRR|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307213|pdb|3KIR|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307271|pdb|3KIT|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307329|pdb|3KIW|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307387|pdb|3KIY|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965650|pdb|3KNI|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965682|pdb|3KNK|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965714|pdb|3KNM|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965746|pdb|3KNO|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979494|pdb|3I8F|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979578|pdb|3I8I|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979632|pdb|3I9C|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979686|pdb|3I9E|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982133|pdb|2X9S|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982192|pdb|2X9U|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|300508650|pdb|3MRZ|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508705|pdb|3MS1|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307568019|pdb|2XG0|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568077|pdb|2XG2|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|309320306|pdb|3OH5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320336|pdb|3OH7|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320408|pdb|3OHJ|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320438|pdb|3OHK|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320489|pdb|3OHZ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320540|pdb|3OI1|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320591|pdb|3OI3|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320642|pdb|3OI5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207731|pdb|2XQE|Z Chain Z, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754055|pdb|2XTG|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754113|pdb|2XUX|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533460|pdb|2Y0V|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533519|pdb|2Y0X|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533578|pdb|2Y0Z|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533637|pdb|2Y11|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533696|pdb|2Y13|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533755|pdb|2Y15|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533814|pdb|2Y17|Z Chain Z, Ef-Tu Complex 3 gi|325533873|pdb|2Y19|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|46197153|gb|AAS81567.1| LSU ribosomal protein L25P [Thermus thermophilus HB27] gi|55772971|dbj|BAD71412.1| 50S ribosomal protein L25 (TL5) [Thermus thermophilus HB8] Length = 206 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ K SA LR+ G++P ++Y + K + + + K + I Sbjct: 2 EYRLKAYYREG-EKPSA--LRRAGKLPGVMYNRHLNRK-VYVDLVEFDKVFRQASIHHVI 57 Query: 65 -LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L L G+ L ++ + LD H DF +S+ V ++VP+RF+ G++ Sbjct: 58 VLELPDGQSLPTLV-RQVNLDKRRRRPEHVDFFVLSD-EPVEMYVPLRFVG--TPAGVRA 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA Sbjct: 114 GGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|167579760|ref|ZP_02372634.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis TXDOH] gi|167617836|ref|ZP_02386467.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis Bt4] Length = 167 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 5/128 (3%) Query: 44 IALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKK 61 Query: 104 VTVHVPVRFINENKSPGIKQGGKLNVVCH---EVSLLCPANNIPDSITVDLNDLKIGDSI 160 + VP+ F+N SP +K VV H E+ + C ++P+ + VDL+ ++ G S+ Sbjct: 62 LHTKVPLHFLNAESSPAVKLSSA--VVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSL 119 Query: 161 HMEDIRLP 168 H +DI LP Sbjct: 120 HAKDIVLP 127 >gi|27366131|ref|NP_761659.1| 50S ribosomal protein L25 [Vibrio vulnificus CMCP6] gi|37679604|ref|NP_934213.1| 50S ribosomal protein L25 [Vibrio vulnificus YJ016] gi|320156643|ref|YP_004189022.1| 50S ribosomal protein L25p [Vibrio vulnificus MO6-24/O] gi|68053194|sp|Q7MLK7|RL25_VIBVY RecName: Full=50S ribosomal protein L25 gi|68053215|sp|Q8D8W6|RL25_VIBVU RecName: Full=50S ribosomal protein L25 gi|27362331|gb|AAO11186.1| LSU ribosomal protein L25p [Vibrio vulnificus CMCP6] gi|37198348|dbj|BAC94184.1| ribosomal protein L25 [Vibrio vulnificus YJ016] gi|319931955|gb|ADV86819.1| LSU ribosomal protein L25p [Vibrio vulnificus MO6-24/O] Length = 92 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR GQ PA++YG + P +AL+ DI ++ F I T Sbjct: 2 KFEAVVRTELGKGASRRLRLAGQFPAVVYGGEAAPVAVALNHDDIVNQMDKPEFYEAI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L IG E V V P+D Q + H DF+++ Sbjct: 61 LVIGGEEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|254519678|ref|ZP_05131734.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226913427|gb|EEH98628.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 188 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 85/161 (52%), Gaps = 9/161 (5%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 K + LRK GQIP IIYG D PI + ++ +R+ KN +I+ +++ + + Sbjct: 20 KANQSKLRKTGQIPGIIYGEFLDHTIPIKMCNAEL-RRMLRKNNSGSIIEVELDDKKFNC 78 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + KD Q + + +I +H DF + + + +P++ I + + +L + H + + Sbjct: 79 VVKDVQKNNLHEI-VHVDFQYIKPNEVIKMRIPIKIIGQENL----ESRRLTLETHNLFI 133 Query: 137 LCPAN--NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 N IP+SI ++++D+ + D + +EDI +PE + ++ Sbjct: 134 DLQGNVEKIPESIEINVSDMNVDDKVLIEDIVIPEDITILT 174 >gi|320160883|ref|YP_004174107.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] gi|319994736|dbj|BAJ63507.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] Length = 210 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 5/150 (3%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 +A+ LR+ G +PA++YG PI L A + +L +K +T++ +++ E + + Sbjct: 16 TAKALRREGYLPAVMYGAHFPSTPILLDAHNAGLKL-AKVSSSTLVYIELDGETHAALVR 74 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GGKLNVVCHEVSLLC 138 + Q D + + L+H DF VS + V + F E SP +K G + EV + Sbjct: 75 EKQRDYIKNRLLHVDFQVVSLTEKIRTTVSLHF--EGVSPAVKDYNGVVVTSLDEVEVEA 132 Query: 139 PANNIPDSITVDLNDL-KIGDSIHMEDIRL 167 ++P+ I VDL+ L +IGD+IH+ D+ + Sbjct: 133 LPQDLPERIVVDLSKLARIGDTIHVRDLEV 162 >gi|302530284|ref|ZP_07282626.1| ribosomal protein L25 [Streptomyces sp. AA4] gi|302439179|gb|EFL10995.1| ribosomal protein L25 [Streptomyces sp. AA4] Length = 205 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 6/164 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + + R+ +N + Sbjct: 9 EVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFA-RVVRENGTNAV 67 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLD+ + K + P+ + + H D L V G VTV V + +P Sbjct: 68 ITLDLEGSSELALTKTIVVHPLKNYIEHVDLLVVKRGEKVTVDV-PVVVTGTAAPSTLVA 126 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ + EV L +IP+ V + ++ G I I LP Sbjct: 127 QDIDTIQVEVEAL----HIPEQFEVSVEGIEAGTQITAGQISLP 166 >gi|68249779|ref|YP_248891.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145635085|ref|ZP_01790791.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148826154|ref|YP_001290907.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229844811|ref|ZP_04464949.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] gi|81335793|sp|Q4QL66|RL25_HAEI8 RecName: Full=50S ribosomal protein L25 gi|166223686|sp|A5UCM3|RL25_HAEIE RecName: Full=50S ribosomal protein L25 gi|68057978|gb|AAX88231.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145267693|gb|EDK07691.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148716314|gb|ABQ98524.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229812192|gb|EEP47883.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] Length = 95 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L IG + V V + Q P L+H DF Sbjct: 64 LVIGGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|319776525|ref|YP_004139013.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] gi|317451116|emb|CBY87349.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] Length = 95 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L IG + V V + Q P L+H DF Sbjct: 64 LVIGGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|62297563|sp|P56930|RL25_THETH RecName: Full=50S ribosomal protein L25; Short=TL5 gi|14719583|pdb|1FEU|A Chain A, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|14719586|pdb|1FEU|D Chain D, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|5640135|emb|CAA64209.1| ribosomal protein TL5 [Thermus thermophilus] Length = 206 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ K SA LR+ G++P ++Y + K + + + K + I Sbjct: 2 EYRLKAYYREG-EKPSA--LRRAGKLPGLMYNRHLNRK-VYVDLVEFDKVFRQASIHHVI 57 Query: 65 -LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L L G+ L ++ + LD H DF +S+ V ++VP+RF+ G++ Sbjct: 58 VLELPDGQSLPTLV-RQVNLDKRRRRPEHVDFFVLSD-EPVEMYVPLRFVG--TPAGVRA 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA Sbjct: 114 GGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|256828485|ref|YP_003157213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] gi|256577661|gb|ACU88797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] Length = 196 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 7/176 (3%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALS----AKDISKRLYSKNFMTTILTLD 68 R++ GKG LR NG +P + Y + + K K YSK I +D Sbjct: 12 REERGKGPCSRLRSNGLVPGVFYNAKGENISFVVENLALGKAFEKVRYSKMIELQI-EVD 70 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 + + + K PV H DF+ + V V +PV + K G+ GGKL Sbjct: 71 GQLQTRNALFKKLVKHPVKRRYDHVDFIGIDLDKEVQVTIPVETVGRAK--GVVLGGKLE 128 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ V + C IPDS+ V++ +L+IG + ++ + LPE ++ N + I Sbjct: 129 ILEERVMVRCLPTAIPDSVVVEVTELEIGGKVLVDQLVLPEGVKAVYDRNFPVIAI 184 >gi|145633031|ref|ZP_01788763.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145637517|ref|ZP_01793175.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148828381|ref|YP_001293134.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229846264|ref|ZP_04466376.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|166223687|sp|A5UIZ5|RL25_HAEIG RecName: Full=50S ribosomal protein L25 gi|144986257|gb|EDJ92836.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145269323|gb|EDK09268.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148719623|gb|ABR00751.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229811268|gb|EEP46985.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|309973302|gb|ADO96503.1| 50S ribosomal protein L25 [Haemophilus influenzae R2846] Length = 95 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L IG + V V + Q P L+H DF Sbjct: 64 LVIGGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|297794323|ref|XP_002865046.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] gi|297310881|gb|EFH41305.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] Length = 245 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 36/187 (19%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------- 59 + A+ R+ G+G + R G+IPA+++ P +L D SKR S+ Sbjct: 32 IQAIPREATGRGVSARDRTIGRIPAVVF-------PQSLLETDASKRGVSRKQLLTADNK 84 Query: 60 -------------FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQV 98 F +T L I E V+P D + +++ F+ Sbjct: 85 QIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKIHRDEENGKILNLVFVWA 144 Query: 99 SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 +G + V VPV F + PG+K+GG L + + LL PA +IP I VD+++L I D Sbjct: 145 DDGEKLKVDVPVVFNGLDNCPGLKKGGNLRSIRSTLKLLGPAEHIPSKIEVDVSELDIED 204 Query: 159 SIHMEDI 165 + ++D+ Sbjct: 205 KVLLQDV 211 >gi|257066620|ref|YP_003152876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] gi|256798500|gb|ACV29155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] Length = 217 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 9/157 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A R+ GK LR IP +IY + + ++ +D K L +TI Sbjct: 3 ELVLQAEKREATGKNKVNKLRAAELIPGVIYAKDEENINVQVTTRDFEKVLRQAG-TSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK---SPGI 121 +TLD G E V+ K YQ P + +H DF +++ + V VPV + ++ P + Sbjct: 62 ITLDFGDEKKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLVGRDEIRVEPSV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 N+ EV C IP + V+++DL+IGD Sbjct: 122 LVQ---NIDVVEVE--CLPKYIPQTADVEVSDLQIGD 153 >gi|169824827|ref|YP_001692438.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302379682|ref|ZP_07268167.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|303234532|ref|ZP_07321169.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] gi|226736323|sp|B0S2F8|RL25_FINM2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167831632|dbj|BAG08548.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302312589|gb|EFK94585.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|302494366|gb|EFL54135.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] Length = 212 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 3/159 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL RDKVG + R LR IP +IYG +P + + K++ ++++ ++++ Sbjct: 5 KLDMQKRDKVGSNAVRKLRVKELIPGVIYGKDFEPINVTVDEKEL-RKVHLMAGTSSLID 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + E VI KD Q P + +H DF ++ G +PV + E + Q Sbjct: 64 VKVDGEEHTVIIKDVQKHPFKNHYVHVDFKEIKMGEVANFTIPV--VLEGRDEIRLQPSV 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 L + EV + C N+P+ V + D++ GD+ ++D+ Sbjct: 122 LMQLLDEVEIECLPKNLPNEAAVSVIDMQYGDTFEVKDL 160 >gi|332687114|ref|YP_004456888.1| 50S ribosomal protein L25p [Melissococcus plutonius ATCC 35311] gi|332371123|dbj|BAK22079.1| LSU ribosomal protein L25p [Melissococcus plutonius ATCC 35311] Length = 209 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 3/142 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR+ G++PAI+YG+ PI K++ L++ N ++T+ I + ++ + + QL Sbjct: 21 LRRKGKVPAIVYGHEIKSIPIFFDEKELLYILHN-NGSNVVITMTINNKKINTLLTNTQL 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + + HA+FL V+ V V E + G+K GG L + + + + Sbjct: 80 DTFNKQMRHAEFLSVNMNEATEVETDVVLTGE--ASGVKAGGILTQNLYTILVSTTPEQL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P++I VD+++L IG++I + D+ Sbjct: 138 PENIEVDISNLGIGEAITVGDL 159 >gi|154509584|ref|ZP_02045226.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] gi|153799218|gb|EDN81638.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] Length = 202 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 11/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ L + ++ L Sbjct: 7 LLAEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLF--LIVRGTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV + E+ +PG Sbjct: 65 KIEGKTQLALVKDVQVHPVRRDILHADFLAVKAGEKVDVEVPVVVVGES-APGTVHS--- 120 Query: 128 NVVCHEVSLL--CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 E ++L PA +IP+S+ V + ++ G ++H+ D++LP Sbjct: 121 ---VEEFTILVKAPATSIPESLEVSIEGVEAGSAVHVSDLKLP 160 >gi|325283580|ref|YP_004256121.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] gi|324315389|gb|ADY26504.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] Length = 238 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%) Query: 26 KNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLD 84 + G IPA+ Y N A+ K + +++ + ++ + + I G E + K Q+D Sbjct: 15 EQGMIPAVAY-NKEKNVSFAIERK-VFDKIFREQGISGLFDISIDGAEAFPALVKTVQMD 72 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNI 143 IH DF V+ G + VP+ KS G +GG +++V H V++L P I Sbjct: 73 KRRREPIHVDFYMVTYGQAIEASVPLH--TTGKSQGEIEGGLVDIVHHNVTVLAPGPRRI 130 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 P I DL+ L IGD I ++LPE I + +I+ P Sbjct: 131 PQEIVADLSGLNIGDHIAAGQLQLPEGVELAMDPEINVISILPP 174 >gi|183219660|ref|YP_001837656.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909797|ref|YP_001961352.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774473|gb|ABZ92774.1| 50S Ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778082|gb|ABZ96380.1| 50S ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 211 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 3/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR +R G +PA I G+ + K ++ K+I K + S T++ L Sbjct: 6 IKAQPRTSTGKGPARRMRVEGLVPANIIGS-GEAKSASVVEKEIQKLIDSGIRKATLIDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + V K+ Q P + + H DF +V+ G + V ++ K G K GG+ Sbjct: 65 ELDGKSEKVFVKEIQRFPHTGQIRHIDFYKVTPGKKIQTTVAIKTTGVAK--GSKAGGQF 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + HE+ + ++ D ITVD+ L IG I + ++ P+ Sbjct: 123 EHLVHEIKVKSTPEDLTDVITVDVTGLDIGMMIKVSELPHPQ 164 >gi|229915838|ref|YP_002884484.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sp. AT1b] gi|259646687|sp|C4L193|RL25_EXISA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229467267|gb|ACQ69039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sp. AT1b] Length = 215 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 11/165 (6%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILTLDIGKELVHVIPKDY 81 LRK G+ ++YG D PI D+ K R + N ++ L ++ + Sbjct: 21 LRKEGKALGVVYGYKVDSTPIVFDEMDLRKILRDHGDN---ALIELHYDGNKINTLVHGS 77 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 + DP ++ H +F+ V V + + + K G+K+GG L ++V++ Sbjct: 78 ETDPFTNFYQHVEFMAVKMDEETEVEADIVLVGDAK--GVKEGGYLAQSLYKVTVAATPA 135 Query: 142 NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQLNITIATI 184 NIP+ I +D+++L IGDS+ + D LPE+ S +S+ ++ IA++ Sbjct: 136 NIPERIELDVSELGIGDSVTVAD--LPEEKSYKIVSEPDMHIASV 178 >gi|317152594|ref|YP_004120642.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] gi|316942845|gb|ADU61896.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] Length = 199 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-KRLYSK----NFM 61 +L+ R K GKG R LR +P I Y IA+ K + ++ Y+K Sbjct: 6 QLNVQERTKTGKGHNRRLRLKEMVPGIYYDQKG--ANIAVQVKLVPLQKAYAKVGNAKVF 63 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + E + + + +PV+ + H DF V + V V + +K G+ Sbjct: 64 ELVLEREGKTETMPALLWRVRNEPVTGMPEHVDFFGVDLTKDIKVAVHYELVGTSK--GV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG+L + ++C IP+SI +D+ DL I DS+++E I PE + + N + Sbjct: 122 KLGGRLQQFRDTIEVICKPMTIPESIVIDITDLDILDSVYIESIAFPEGVTPVFDENYAV 181 Query: 182 ATIVA 186 I Sbjct: 182 LHIAG 186 >gi|15608155|ref|NP_215531.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Rv] gi|15840443|ref|NP_335480.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CDC1551] gi|31792206|ref|NP_854699.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis AF2122/97] gi|121636944|ref|YP_977167.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660797|ref|YP_001282320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|148822224|ref|YP_001286978.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis F11] gi|167968126|ref|ZP_02550403.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|215402830|ref|ZP_03415011.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|215410617|ref|ZP_03419425.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 94_M4241A] gi|215426293|ref|ZP_03424212.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T92] gi|215429876|ref|ZP_03427795.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis EAS054] gi|215445164|ref|ZP_03431916.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T85] gi|218752686|ref|ZP_03531482.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis GM 1503] gi|219556883|ref|ZP_03535959.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T17] gi|224989416|ref|YP_002644103.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799955|ref|YP_003032956.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|254231309|ref|ZP_04924636.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|254363931|ref|ZP_04979977.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|254550000|ref|ZP_05140447.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185926|ref|ZP_05763400.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CPHL_A] gi|260200044|ref|ZP_05767535.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T46] gi|260204233|ref|ZP_05771724.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis K85] gi|289442436|ref|ZP_06432180.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289446596|ref|ZP_06436340.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289555202|ref|ZP_06444412.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289568993|ref|ZP_06449220.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289573655|ref|ZP_06453882.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289744751|ref|ZP_06504129.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289749545|ref|ZP_06508923.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289753076|ref|ZP_06512454.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289757097|ref|ZP_06516475.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|289761151|ref|ZP_06520529.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|294995204|ref|ZP_06800895.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 210] gi|297633541|ref|ZP_06951321.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN 4207] gi|297730526|ref|ZP_06959644.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN R506] gi|298524511|ref|ZP_07011920.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|306775150|ref|ZP_07413487.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|306781935|ref|ZP_07420272.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|306783710|ref|ZP_07422032.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|306788065|ref|ZP_07426387.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|306792398|ref|ZP_07430700.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|306796801|ref|ZP_07435103.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|306802687|ref|ZP_07439355.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|306806866|ref|ZP_07443534.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|306967067|ref|ZP_07479728.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|306971257|ref|ZP_07483918.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|307078986|ref|ZP_07488156.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|307083546|ref|ZP_07492659.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|313657855|ref|ZP_07814735.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN V2475] gi|54039135|sp|P66122|RL25_MYCBO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54041837|sp|P66121|RL25_MYCTU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|1870013|emb|CAB06864.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium tuberculosis H37Rv] gi|13880614|gb|AAK45294.1| ribosomal L25p family protein [Mycobacterium tuberculosis CDC1551] gi|31617794|emb|CAD93903.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium bovis AF2122/97] gi|121492591|emb|CAL71059.1| Probable 50S Ribosomal protein L25 rplY [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600368|gb|EAY59378.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|134149445|gb|EBA41490.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|148504949|gb|ABQ72758.1| 50S ribosomal protein L25 [Mycobacterium tuberculosis H37Ra] gi|148720751|gb|ABR05376.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis F11] gi|224772529|dbj|BAH25335.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321458|gb|ACT26061.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|289415355|gb|EFD12595.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289419554|gb|EFD16755.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289439834|gb|EFD22327.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289538086|gb|EFD42664.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289542747|gb|EFD46395.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289685279|gb|EFD52767.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289690132|gb|EFD57561.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289693663|gb|EFD61092.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289708657|gb|EFD72673.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|289712661|gb|EFD76673.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|298494305|gb|EFI29599.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|308216300|gb|EFO75699.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|308325326|gb|EFP14177.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|308331493|gb|EFP20344.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|308335299|gb|EFP24150.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|308339107|gb|EFP27958.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|308342779|gb|EFP31630.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|308346688|gb|EFP35539.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|308350603|gb|EFP39454.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|308355236|gb|EFP44087.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|308359191|gb|EFP48042.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|308363093|gb|EFP51944.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|308366757|gb|EFP55608.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|323720515|gb|EGB29597.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CDC1551A] gi|326904758|gb|EGE51691.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis W-148] gi|328459698|gb|AEB05121.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 4207] Length = 215 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G+IPA++YG+ ++P+ + L D + L +LT Sbjct: 8 QLRVTVRTETGKGASRRARRAGKIPAVLYGHGAEPQHLELPGHDYAAVLRHSG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + HAD L V G V V V V Q G Sbjct: 67 LDIAGKEQL-ALTKALHIHPIRRTIQHADLLVVRRGEKVVVEVSVVVEG--------QAG 117 Query: 126 KLNVVCHE---VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +V E + + A +IP+ +TV + + G + I LP S +S ++ + Sbjct: 118 PDTLVTQETNSIEIEAEALSIPEQLTVSIEGAEPGTQLTAGQIALPAGVSLISDPDLLVV 177 Query: 183 TIV-APIS 189 +V AP + Sbjct: 178 NVVKAPTA 185 >gi|183984442|ref|YP_001852733.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] gi|183177768|gb|ACC42878.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] Length = 214 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G++PA++YG+ +P+ + L A D + L + +LT Sbjct: 8 QLVVTVRTETGKGASRRARREGKVPAVMYGHGEEPRHLELPAHDYAAVLRNSG-TNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + K + P+ + HAD + V G V V V V + +PG + Sbjct: 67 LDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEG-DAAPGTLVTQE 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 N + + A +IP+ +TV + ++ G I LP +S + + +V Sbjct: 126 ANT----IEIEAEAMSIPEQLTVSIEGVEPGTQFTAGQIELPAGVGLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|146296817|ref|YP_001180588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166223670|sp|A4XKG2|RL25_CALS8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145410393|gb|ABP67397.1| LSU ribosomal protein L25P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 203 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 7/174 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ K + LRK G IPA+ YG+ P +S K+ K K I L GKE Sbjct: 10 RETFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYKQKGLAGKIKILIDGKE 69 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNVV 130 +I K+ Q V +IH DF +SE + V VP+ F N KS G+ +++ V Sbjct: 70 RTALI-KEVQTHYVKGNIIHVDFQILSENKPIYVEVPIVFENAEILKSRGLVLQRQIDTV 128 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 E+ L +IP+ + +DL + + +I + DI+LPE L+ +A I Sbjct: 129 --EIEGL--PKDIPEHLVIDLMEYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|34811573|pdb|1PNU|T Chain T, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. gi|34811626|pdb|1PNY|T Chain T, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. gi|56966365|pdb|1VOR|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966418|pdb|1VOU|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966471|pdb|1VOW|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966524|pdb|1VOY|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966577|pdb|1VP0|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400 Length = 173 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSD 88 I A+ Y N + AL K R + + T + + + G E + K Q+D Sbjct: 19 IAAVAY-NKENNVSFALDRKAFD-RAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKR 76 Query: 89 ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA-NNIPDSI 147 IH DF V+ G V V VPV +S G QGG +++V H + ++ P IP + Sbjct: 77 APIHVDFYMVTYGEPVEVSVPVH--TTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQEL 134 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 VD+ + IGD I DI+LPE + + +T+ +++ Sbjct: 135 VVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVL 172 >gi|301170388|emb|CBW29994.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae 10810] Length = 95 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTVQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L IG + V V + Q P L+H DF Sbjct: 64 LVIGGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|315641812|ref|ZP_07896816.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] gi|315482487|gb|EFU73026.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] Length = 204 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 3/144 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G+IPA++ G + I+L + +I K L ++ + T+LT+ I + V+ + +Y Sbjct: 21 LRHEGKIPAVVNGYQIESTTISLDSAEIEKVL-RQHGLNTVLTMSIDGKKVNTLIHNYTT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D + L H +FL V+ V V + ++ G++ GG L + V++ + + Sbjct: 80 DTFTSKLTHIEFLSVNMNEVTEVEAEVVLVG--EAAGVRAGGVLTQTLYSVTVAATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRL 167 P+++ VD+ DL+IG S+ + D+++ Sbjct: 138 PENVEVDVTDLEIGQSLSVADLKV 161 >gi|261416824|ref|YP_003250507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373280|gb|ACX76025.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326515|gb|ADL25716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 207 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 7/164 (4%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFMTTILTLDI-GKELVHVIPKDY 81 LRK GQIPA+ YG + K I++S D+ K L K + T+L L+I GK + Sbjct: 22 LRKAGQIPAVYYGKGIEAKNISVSEIDLRKVLAPGKRY--TLLDLEIDGKAGNPALVYSV 79 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPA 140 Q D ++ + H DF+++++ V V +PV+ G+K QGG + + L Sbjct: 80 QKDALTQKITHVDFIKIADDEFVKVRIPVKL--SGLPVGVKTQGGLFSQEARYLMLAAKP 137 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +IP + +D+++ + + + +D +LPE + S I TI Sbjct: 138 ASIPSVLELDISNFETNVTFYAKDFKLPENVTLASGPRTVIFTI 181 >gi|313902507|ref|ZP_07835908.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] gi|313467193|gb|EFR62706.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] Length = 210 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 14/185 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNFMTTI 64 L AV R+ G AR +R+ G +PA++YG + P+ L A++ + L S + +T Sbjct: 5 LRAVPREP---GHARRVRREGGLPAVLYGPSGN-FPVRLDAREFHRLLASGRARGILTVE 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV--RFINENKSPGIK 122 L D + + K+ Q P L+H D +V E V VP+ R + E + GI Sbjct: 61 LVQDGSTRSLSAMVKELQYHPARGDLLHVDLFEVREDEPVRAEVPIVLRGVEEAEKRGI- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L E+ + ++P ++ D+ L +G+ + + D+ +P + ++ + +A Sbjct: 120 ----LQHQLAELEIESLPRHMPAAVEGDVARLPVGEELRVRDLEVPAQVRVLNDPDEIVA 175 Query: 183 TIVAP 187 ++ P Sbjct: 176 VLLPP 180 >gi|148654602|ref|YP_001274807.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus sp. RS-1] gi|226736358|sp|A5UQF4|RL25_ROSS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148566712|gb|ABQ88857.1| LSU ribosomal protein L25P [Roseiflexus sp. RS-1] Length = 218 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 7/168 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ LS R +GK RL R++G +PA +YG +P + + A+ + +Y + T+ Sbjct: 3 EKFTLSLEPRSVLGKKVKRL-RRSGILPATVYGKGIEPIAVQIDARSF-QAIYRQAGRTS 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L I G + Q PV+ +IHADF V V V VP+ E KSP ++ Sbjct: 61 LIELHIAGHPPLAAFIHALQRHPVTRDIIHADFRAVDLRQEVEVAVPLHI--EGKSPLVE 118 Query: 123 QG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLP 168 G LN V + + IP ITVD++ L D SIH D+ LP Sbjct: 119 SGEAVLNQVLSTIEIRALPTAIPAHITVDISALDSFDKSIHARDLMLP 166 >gi|326332302|ref|ZP_08198582.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] gi|325950008|gb|EGD42068.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] Length = 208 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 16/190 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIAL--SAKDISKRLYSKNFMTTI 64 K+ A R + GKG+AR +R+ +IPA++YG+ +DP + L A ++ + + N + Sbjct: 5 KIVAEKRTEFGKGAARRIRRENKIPAVVYGHGADPIHLTLPGHATMMALKHHGAN---AL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LDI + + K Q+D V ++ H DF+ V G VTV + V + + S G Sbjct: 62 LELDIDGKKQLALTKQVQVDDVRRVIEHVDFVAVRAGEKVTVDIVVNVVGDAAS-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-----LNI 179 + + +++ A ++P+S+ + + L+IG I + LP+ T+ ++ +NI Sbjct: 117 TMVVTDANTLTVEAEATHVPESLEISIEGLEIGTQILAGQVELPKGTTLVTDPETLVVNI 176 Query: 180 TIA-TIVAPI 188 T A TI P+ Sbjct: 177 TEARTIEEPV 186 >gi|118619723|ref|YP_908055.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium ulcerans Agy99] gi|118571833|gb|ABL06584.1| 50S ribosomal protein L25 RplY [Mycobacterium ulcerans Agy99] Length = 214 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G++PA++YG+ ++P+ + L A D + L + +LT Sbjct: 8 QLVVTVRTETGKGASRRARREGKVPAVMYGHGAEPQHLELPAHDYAAVLRNSG-TNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + K + P+ + HAD + V G V V V V + +PG + Sbjct: 67 LDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEG-HAAPGTLVTQE 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 N + + A +IP+ +TV + + G I LP +S + + +V Sbjct: 126 ANT----IEIEAEAMSIPEQLTVSIEGAEPGTQFTAGQIELPAGVGLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|15240108|ref|NP_201487.1| unknown protein [Arabidopsis thaliana] gi|9758136|dbj|BAB08628.1| unnamed protein product [Arabidopsis thaliana] gi|15450930|gb|AAK96736.1| Unknown protein [Arabidopsis thaliana] gi|17978763|gb|AAL47375.1| unknown protein [Arabidopsis thaliana] gi|332010889|gb|AED98272.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain protein [Arabidopsis thaliana] Length = 249 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 36/187 (19%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------- 59 + A+ R+ G+G + R G+IPA+++ P +L D SKR S+ Sbjct: 36 IQAIPREATGRGVSARDRTIGRIPAVVF-------PQSLLDTDASKRGVSRKQLLTADKK 88 Query: 60 -------------FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQV 98 F +T L I E V+P D + +++ F+ Sbjct: 89 QIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWA 148 Query: 99 SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 +G + V VPV F + PG+++GG L + + LL PA +IP I VD+++L I D Sbjct: 149 DDGEKLKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIED 208 Query: 159 SIHMEDI 165 + ++D+ Sbjct: 209 KVLLQDV 215 >gi|322514160|ref|ZP_08067225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] gi|322119946|gb|EFX91948.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] Length = 95 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 51/92 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIVLNHDNVNNAQIHDAFYSEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + HV + Q P L+H DF +V Sbjct: 64 IVVAGKEEHVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|307721573|ref|YP_003892713.1| 50S ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] gi|306979666|gb|ADN09701.1| LSU ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] Length = 178 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG + A + + + +K+ + +++ Sbjct: 2 LEGIVRESIGKKGTKALRRDGYLIANIYGKGLENINAAFKENEYIRTVRNKDTLAFPVSI 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + G E+ +V+ + Y+ PV+ L+H D + G VPV + E + G+K G + Sbjct: 62 N-GNEM-NVVVQSYESHPVTGKLLHVDLMVAQPGVVTHYMVPVEPVGE--AIGVKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 NV + + ++P +I +D+ D+ +GD+ + DI E + + +I+ Sbjct: 118 NVSKRRLRVKAKIEDLPKTIVIDVTDMDVGDAKLIRDIDASENVKFTDADRVAVLSII 175 >gi|239941864|ref|ZP_04693801.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|239988326|ref|ZP_04708990.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 11379] gi|291445312|ref|ZP_06584702.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|291348259|gb|EFE75163.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] Length = 196 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 7/167 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ ++P ++YG+ ++P + L ++ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRVRRADRVPGVVYGHGAEPVHVTLPGHELLLALRTANVL--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q P+ + H D L V G V V + V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRHPLKGTIEHVDLLTVKRGEKVEVEIAVHA-EGDLAPGANL- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 L V + + + A +IP+S+TV + L G SI +DI LP+ + Sbjct: 118 --LEFVQNTLLVEAEATHIPESVTVSVAGLDAGASIVAKDIPLPKGS 162 >gi|328948675|ref|YP_004366012.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] gi|328448999|gb|AEB14715.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] Length = 184 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R + GK A+ +R G+IPA+ Y + + + A + SK S TT++ L Sbjct: 6 INATTRTESGKKYAKKIRAQGKIPAVAYNEKGESFMLEIDANEFSKAWRSIT-KTTLIVL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I KD + D +D +HADF VS T +R+ + G+ +GG + Sbjct: 65 KIDGVENKAFIKDTEYDIKTDKSLHADFHIVSGQKKFTFVYKIRY--SGTAAGVLKGGFM 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E+ + ++P+ I+ D++ L+IG + D L +K +S + +I P Sbjct: 123 VKHVPEIKVKALPQDLPEFISADVSKLEIGQKFTIADFNLGDKIEVLSDPAALVVSIAPP 182 >gi|293189159|ref|ZP_06607884.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] gi|292821897|gb|EFF80831.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] Length = 202 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 11/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ L + ++ L Sbjct: 7 LLAEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLF--LIVRGTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV + E+ +PG Sbjct: 65 KIEGKTQLALVKDVQVHPVRRHILHADFLAVKAGEKVDVEVPVVVVGES-APGTVHS--- 120 Query: 128 NVVCHEVSLL--CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 E ++L PA +IP+S+ V + ++ G ++H+ D+ LP Sbjct: 121 ---VEEFTILVKAPATSIPESLEVSIEGVEAGSAVHVSDLLLP 160 >gi|240169901|ref|ZP_04748560.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 9/185 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R GKG++R R++G+IPA++YG+ ++P+ + L D + L +LT Sbjct: 8 QLKVTVRTATGKGASRRARRDGRIPAVLYGHGAEPQHLELPGHDFAAVLRHSG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI GKE + + K + P+ + HAD L V G V V V V E S G Sbjct: 67 LDIAGKEQL-ALTKALDIHPIRRTIQHADLLVVRRGEKVVVEVAVVVEGEAAS-----GT 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + + A +IP+ +TV + D + G I LP + +S + + +V Sbjct: 121 LVTQEANAIEIEAEALSIPEHLTVSVEDAEPGTQFTAGKIALPRGVNLISDPELLVVNVV 180 Query: 186 -APIS 189 AP + Sbjct: 181 NAPTA 185 >gi|15602504|ref|NP_245576.1| 50S ribosomal protein L25 [Pasteurella multocida subsp. multocida str. Pm70] gi|68053230|sp|Q9CN10|RL25_PASMU RecName: Full=50S ribosomal protein L25 gi|12720914|gb|AAK02723.1| RpL25 [Pasteurella multocida subsp. multocida str. Pm70] Length = 94 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 50/92 (54%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F T ++T Sbjct: 3 KFNAEVRQSQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDDLNNAQVHDAFYTDVIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q P L+H DF +V Sbjct: 63 LVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|224510801|pdb|3FIN|Z Chain Z, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 50s Subunit Length = 177 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 9/183 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 +L A R+ K SA LR+ G++P ++Y + K + + + K + I Sbjct: 1 YRLKAYYREG-EKPSA--LRRAGKLPGVMYNRHLNRK-VYVDLVEFDKVFRQASIHHVIV 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L G+ L ++ + LD H DF +S+ V ++VP+RF+ G++ G Sbjct: 57 LELPDGQSLPTLV-RQVNLDKRRRRPEHVDFFVLSD-EPVEMYVPLRFVG--TPAGVRAG 112 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 113 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 172 Query: 185 VAP 187 V P Sbjct: 173 VPP 175 >gi|322812593|pdb|3PYO|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812646|pdb|3PYR|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|322812699|pdb|3PYT|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812752|pdb|3PYV|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome Length = 188 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 9/183 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 +L A R+ K SA LR+ G++P ++Y + K + + + K + I Sbjct: 1 YRLKAYYREG-EKPSA--LRRAGKLPGVMYNRHLNRK-VYVDLVEFDKVFRQASIHHVIV 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L G+ L ++ + LD H DF +S+ V ++VP+RF+ G++ G Sbjct: 57 LELPDGQSLPTLV-RQVNLDKRRRRPEHVDFFVLSD-EPVEMYVPLRFVG--TPAGVRAG 112 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 113 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 172 Query: 185 VAP 187 V P Sbjct: 173 VPP 175 >gi|225430902|ref|XP_002276349.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 249 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 7/167 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRL--YSKNF 60 + A+ R GK + RK G++P+I++ + + + I++ I K + ++F Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I + L +D +++ F++ + + V VP+ F E+ SPG Sbjct: 114 FLSXXXXLIIWNFCFLRYFQLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPG 173 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 +K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 LKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKV 220 >gi|251792509|ref|YP_003007235.1| 50S ribosomal protein L25 [Aggregatibacter aphrophilus NJ8700] gi|247533902|gb|ACS97148.1| ribosomal L25p family [Aggregatibacter aphrophilus NJ8700] Length = 95 Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 50/89 (56%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHDAFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L IG + V V + Q P L+H DF Sbjct: 64 LVIGGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|187776969|ref|ZP_02993442.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] gi|187775628|gb|EDU39430.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] Length = 178 Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 14/167 (8%) Query: 24 LRKNGQIPAIIYGN-----MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +R+ G++P IIYG M + I L++ + S+ + ++ G V+ Sbjct: 17 IRREGKVPGIIYGKNLNNLMFEVGEIELNS------MISQVGEHGVTDVNYGGADYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V+ S + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I +DL+ IG + + D+ L E + M L+ TIA+I Sbjct: 129 CPEEKLPNNIMIDLSQYNIGKTFRISDLELGEDITFMESLDSTIASI 175 >gi|225023009|ref|ZP_03712201.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] gi|224944232|gb|EEG25441.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] Length = 203 Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-T 63 E ++A R + GKG AR LR G++P +IY + D PI +A I +N T Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLD-TPIHFAASRIDIHALLRNHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E +PG Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGE-PTPGTML 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + V E +L +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 122 VQDSDTVLVEADVL----SIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|260914051|ref|ZP_05920524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] gi|260631684|gb|EEX49862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] Length = 94 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ +F + ++T Sbjct: 3 KFTAEVRQAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDLNNAQVHDSFYSEVIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q P L+H DF +V Sbjct: 63 LVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|293573041|ref|ZP_06683983.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] gi|291606943|gb|EFF36323.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] Length = 202 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ T++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKIESTPISFDGLTLSK-LLREHGANTVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G+K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESVGVKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAVVA 180 >gi|295694755|ref|YP_003587993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] gi|295410357|gb|ADG04849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] Length = 212 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 9/164 (5%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQ 82 LR++G+IP ++YG +P P+A+ + K + T ++ +++ G+ + + ++ Q Sbjct: 22 LRRSGRIPGVVYGKGREPVPVAVEEALLVKMQTGQE--TALVDIELPGQGRLPAVIQEIQ 79 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRF--INENKSPGIKQGGKLNVVCHEVSLLCPA 140 DPV+ ++H DF V V V VPV+ I E K+G V+ + + C Sbjct: 80 RDPVTRKILHVDFHVVMLDEPVDVEVPVQVQGIEEVD----KRGLVAQVLLRHLRIRCLP 135 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 IP+ + VD++ + GD I D++LP+ + + + + I Sbjct: 136 TEIPEHLRVDVSRAEEGDVIRAADVQLPDGAHLLEEADEVVVNI 179 >gi|227550850|ref|ZP_03980899.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257887897|ref|ZP_05667550.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257893303|ref|ZP_05672956.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257896485|ref|ZP_05676138.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|293379263|ref|ZP_06625409.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] gi|227179948|gb|EEI60920.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257823951|gb|EEV50883.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257829682|gb|EEV56289.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257833050|gb|EEV59471.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|292642059|gb|EFF60223.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] Length = 202 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ T++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKIESTPISFDGLTLSK-LLREHGANTVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G+K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESIGVKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAVVA 180 >gi|305682167|ref|ZP_07404971.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] gi|305658640|gb|EFM48143.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] Length = 204 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-T 63 E ++A R + GKG AR LR G++P +IY + D PI +A I +N T Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLD-TPIHFAASRIDIHALLRNHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E +PG Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGE-PTPGTML 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + V E +L +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 122 VQDSDTVLVEADVL----SIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|283853056|ref|ZP_06370312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] gi|283571523|gb|EFC19527.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] Length = 198 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 7/182 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R +GKG+ R LR +P + Y P+ + + K+LY+K + L Sbjct: 7 LAVKTRAGIGKGANRKLRAEDMVPGVYYDATGVNIPVMVEHLPL-KKLYAKTASAHVFDL 65 Query: 68 DI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I GKE + + P + H DF V + VH+PV K+ G + Sbjct: 66 LIESENGKETKPALVWKLEHHPTKPRITHVDFYGVDLTKAIRVHIPVEVTG--KAKGQVK 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + + + +IPD + +D+ DL + +++ + D+ LPE ++ N I Sbjct: 124 GGAMVLHRETIEVTSLPLSIPDKVVIDVTDLDLNETVQVADLALPEGVKAVYDDNYAILG 183 Query: 184 IV 185 I+ Sbjct: 184 IL 185 >gi|312135063|ref|YP_004002401.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor owensensis OL] gi|311775114|gb|ADQ04601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor owensensis OL] Length = 201 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LR+ G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDVFTKSNLNKLRREGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I KD Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KDVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENTEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMSYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|78776666|ref|YP_392981.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurimonas denitrificans DSM 1251] gi|109893404|sp|Q30TD5|RL25_SULDN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78497206|gb|ABB43746.1| LSU ribosomal protein L25P [Sulfurimonas denitrificans DSM 1251] Length = 178 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG A + + + +K ++ + + Sbjct: 2 LEGIIRESIGKKGTKALRRDGYLIANIYGKGLQNLHAAFKENEYIRTVRNKETLSFPIKV 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D KE+ +V+ + Y+ PV+ L+H D + HVPV + E + G+K G + Sbjct: 62 D-SKEM-NVVVQAYEAHPVTGKLLHVDLMVAQPNVVTHYHVPV--VTEGDAIGLKNKGLI 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 ++ + + N P+SI VD+ + +GD+ + DI Sbjct: 118 HISKPRLRVKATIENTPNSIVVDVTKMDVGDAKMVRDI 155 >gi|261867995|ref|YP_003255917.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293389976|ref|ZP_06634310.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413327|gb|ACX82698.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290950510|gb|EFE00629.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 95 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDVNNAQVHDTFYSDVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I ++ V V + Q P L+H DF +V Sbjct: 64 LVIDEKEVAVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|69249937|ref|ZP_00605063.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257878830|ref|ZP_05658483.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257890689|ref|ZP_05670342.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|258615099|ref|ZP_05712869.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecium DO] gi|293563627|ref|ZP_06678071.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|314949097|ref|ZP_07852457.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] gi|68194053|gb|EAN08602.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257813058|gb|EEV41816.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257827049|gb|EEV53675.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|291604427|gb|EFF33917.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|313644513|gb|EFS09093.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] Length = 201 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ T++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKVESTPISFDGLTLSK-LLREHGANTVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESVGAKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAVVA 180 >gi|262373268|ref|ZP_06066547.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] gi|262313293|gb|EEY94378.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] Length = 100 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 8 LSAVMRDKV--GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R+ GKG++R LR QIPAIIYG ++P I L ++I K L S F ++ Sbjct: 8 LNAQAREAALQGKGASRRLRHASQIPAIIYGGSAEPVTITLELREIVKALESNEFFEEVI 67 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + IG ++ +V + Q P + +HADF Sbjct: 68 EIKIGDKVENVKIQALQRHPAKNTPMHADF 97 >gi|312127690|ref|YP_003992564.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor hydrothermalis 108] gi|311777709|gb|ADQ07195.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor hydrothermalis 108] Length = 200 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDVFTKSNLNRLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|257881467|ref|ZP_05661120.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257885739|ref|ZP_05665392.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260558395|ref|ZP_05830591.1| ribosomal protein L25 [Enterococcus faecium C68] gi|261207102|ref|ZP_05921791.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289565896|ref|ZP_06446336.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|293556880|ref|ZP_06675441.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|294616087|ref|ZP_06695898.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|294619422|ref|ZP_06698877.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|294621228|ref|ZP_06700413.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|314938857|ref|ZP_07846128.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] gi|314943662|ref|ZP_07850416.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|314952190|ref|ZP_07855208.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|314994548|ref|ZP_07859814.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|314996547|ref|ZP_07861584.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|257817125|gb|EEV44453.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257821595|gb|EEV48725.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260075569|gb|EEW63875.1| ribosomal protein L25 [Enterococcus faecium C68] gi|260078730|gb|EEW66432.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289162269|gb|EFD10129.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|291591050|gb|EFF22748.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|291594334|gb|EFF25756.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|291599224|gb|EFF30256.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|291600964|gb|EFF31255.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|313589288|gb|EFR68133.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|313591070|gb|EFR69915.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|313595722|gb|EFR74567.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|313597699|gb|EFR76544.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|313641868|gb|EFS06448.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] Length = 202 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ T++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKVESTPISFDGLTLSK-LLREHGANTVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESVGAKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAVVA 180 >gi|226953440|ref|ZP_03823904.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|294649570|ref|ZP_06726990.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] gi|226835823|gb|EEH68206.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|292824557|gb|EFF83340.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] Length = 100 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 8 LSAVMRDKV--GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R+ GKGS+R LR QIPAIIYG ++P I L ++I K L + F ++ Sbjct: 8 LNAQAREAAQQGKGSSRRLRHAAQIPAIIYGGSAEPVAITLELREIVKALENNAFFEEVI 67 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + IG ++ +V + Q P + +HADF Sbjct: 68 EIKIGDKVENVKIQALQRHPAKNTPMHADF 97 >gi|312622515|ref|YP_004024128.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kronotskyensis 2002] gi|312202982|gb|ADQ46309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kronotskyensis 2002] Length = 200 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMSYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|212696420|ref|ZP_03304548.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] gi|212676592|gb|EEB36199.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] Length = 214 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L + R+ VGK LR+ +P ++YG + + +++D K L S+ +TI+ L Sbjct: 6 LKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKVL-SQAGTSTIIDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK---SPGIKQG 124 D+ E V V+ KDYQ+ P H DF ++ + V VPV + P + Sbjct: 65 DLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIRVEPSV--- 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 L V + C IP V + +++IGD+ + D+ + Sbjct: 122 --LVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFTVADLDI 162 >gi|302871951|ref|YP_003840587.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] gi|302574810|gb|ADL42601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] Length = 200 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|259507025|ref|ZP_05749925.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] gi|259165303|gb|EEW49857.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] Length = 222 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG +M I L+ +D + L +N Sbjct: 21 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAG-LVRRN 79 Query: 60 FMTTILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LD+ K+L + K + ++ + H D L ++ G V V +PV + Sbjct: 80 GVNAVMELDVEGVKQLAMI--KHIDQNVLTFNIDHVDLLAITRGEKVEVEIPV-IVEGQP 136 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 +P + + E L NIP+ I V + +++G I DI+L + + + Sbjct: 137 APNTMFVQDADTIRVEADAL----NIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDA 192 Query: 178 NITIATIVAP 187 + IA +V P Sbjct: 193 ELLIANVVLP 202 >gi|25027568|ref|NP_737622.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium efficiens YS-314] gi|71153138|sp|Q8FQV5|RL25_COREF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23492850|dbj|BAC17822.1| putative 50S ribosomal protein L25 [Corynebacterium efficiens YS-314] Length = 202 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG +M I L+ +D + L +N Sbjct: 1 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAG-LVRRN 59 Query: 60 FMTTILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LD+ K+L + K + ++ + H D L ++ G V V +PV + Sbjct: 60 GVNAVMELDVEGVKQLAMI--KHIDQNVLTFNIDHVDLLAITRGEKVEVEIPV-IVEGQP 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 +P + + E L NIP+ I V + +++G I DI+L + + + Sbjct: 117 APNTMFVQDADTIRVEADAL----NIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDA 172 Query: 178 NITIATIVAP 187 + IA +V P Sbjct: 173 ELLIANVVLP 182 >gi|167627805|ref|YP_001678305.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189042358|sp|B0TZF1|RL25_FRAP2 RecName: Full=50S ribosomal protein L25 gi|167597806|gb|ABZ87804.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 96 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F ++ +TL Sbjct: 6 LKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +I + VI K Q P L+HADF++V Sbjct: 66 EIDGQEERVIIKALQRHPYKVKLVHADFMRV 96 >gi|312793426|ref|YP_004026349.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180566|gb|ADQ40736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 198 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|254518677|ref|ZP_05130733.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226912426|gb|EEH97627.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 198 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD +A+ LR+ G++P I+YG + + ++ + + SKN +L D+ Sbjct: 9 RDSNISNNAKKLRRAGKVPGILYGKSLNDFMFEVGELELCREI-SKNGEHGVLDFDLNGC 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + KD Q DPVS +IH D ++ + + VP+ ++ E S K+G L Sbjct: 68 AHKALIKDVQRDPVSHKIIHLDLEELQQNQKIVSSVPIHYVGE--SHLGKRGMVLQKEKD 125 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A+ +P + +++N G + D+ + + S + LN IA++ Sbjct: 126 SIRVECTADTLPKHVDININRSDDGYVYRVGDLEIASELSIIDDLNTVIASV 177 >gi|222529238|ref|YP_002573120.1| 50S ribosomal protein L25/general stress protein Ctc [Caldicellulosiruptor bescii DSM 6725] gi|254801034|sp|B9MRP3|RL25_ANATD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222456085|gb|ACM60347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor bescii DSM 6725] Length = 200 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IPA+ YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMAYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|152993638|ref|YP_001359359.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurovum sp. NBC37-1] gi|151425499|dbj|BAF73002.1| 50S ribosomal protein L25 [Sulfurovum sp. NBC37-1] Length = 178 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A +Y N + A + + + +K+ + + Sbjct: 2 LEGIVRESIGKTTAKKLRRDGYLTANLYANGVENIQAAFKRGEFMRAVRNKDSLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQL PV ++H D G VPV + G+K G L Sbjct: 60 KVGDKELNVVIQEYQLHPVHGEVVHVDLRITVPGQVTDFLVPV--VTHGTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + N+P +++ L DS+ + DI +P M + ++ + ++ Sbjct: 118 VMSKRRVKVRGAIENMPAKFDLNVEPLNRDDSLLIRDIEVPANCKMMDRPDVAVCGVI 175 >gi|237785153|ref|YP_002905858.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium kroppenstedtii DSM 44385] gi|237758065|gb|ACR17315.1| 50S ribosomal protein L25 [Corynebacterium kroppenstedtii DSM 44385] Length = 218 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF-MTTI 64 L A+ R + GKG++R LR+ G+IPA+IYG D PI +S I +N I Sbjct: 6 TDLEALPRHEFGKGASRRLRRAGRIPAVIYGKELD-APIHISVDSIEFHAVLRNHGANAI 64 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ E + K + ++ HAD L + G V V +PG Sbjct: 65 VDLNVDGEKHLTMVKAVDQNVLTLDADHADLLAIRRGEKVEV-EVPVVTEGEVAPGAMLM 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++V+ E +L IP+ IT+D+ L++G I D+++P T+ +S I + Sbjct: 124 QDVDVIDVEADVLS----IPEEITIDVEGLEVGTQITAGDVQMPANTTLISDPETLIVNV 179 Query: 185 VAP 187 V P Sbjct: 180 VVP 182 >gi|16273519|ref|NP_439772.1| 50S ribosomal protein L25 [Haemophilus influenzae Rd KW20] gi|260580405|ref|ZP_05848234.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260582164|ref|ZP_05849958.1| ribosomal protein L25P [Haemophilus influenzae NT127] gi|1173000|sp|P45281|RL25_HAEIN RecName: Full=50S ribosomal protein L25 gi|1574477|gb|AAC23277.1| ribosomal protein L25 (rpL25) [Haemophilus influenzae Rd KW20] gi|260093082|gb|EEW77016.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260094796|gb|EEW78690.1| ribosomal protein L25P [Haemophilus influenzae NT127] Length = 95 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 51/89 (57%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L + + V V + Q P L+H DF Sbjct: 64 LVVEGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|241668366|ref|ZP_04755944.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876899|ref|ZP_05249609.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842920|gb|EET21334.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 96 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F ++ +TL Sbjct: 6 LKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +I + VI K Q P L+HADF++V Sbjct: 66 EIDGQEEKVIIKALQRHPYKVKLVHADFMRV 96 >gi|329124034|ref|ZP_08252581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] gi|327467459|gb|EGF12957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] Length = 95 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 51/89 (57%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L + + V V + Q P L+H DF Sbjct: 64 LVVDGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|255086031|ref|XP_002508982.1| predicted protein [Micromonas sp. RCC299] gi|226524260|gb|ACO70240.1| predicted protein [Micromonas sp. RCC299] Length = 226 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 6/174 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISK--RLYS- 57 D K + + R GK + LR++G +P +++G + + + +D+ + R+Y Sbjct: 32 DLKGDNIDVMPRTGTGKTVTKRLRRDGLVPGVLFGPGDQTGELLQMPKQDVERLVRIYGL 91 Query: 58 KNFMTTILTLDI--GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 ILTL+ G V+ K D + + + +F+ + V V VPVR + Sbjct: 92 SGIGARILTLNFPDGVRKQDVLAKQVIYDATNINVENVNFMPCGPETEVKVKVPVRVEGD 151 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + PGIK+GG + +++ C +IP I +++ + +GD + + D+ +PE Sbjct: 152 DACPGIKKGGFAWKLHKTLTVTCKGKDIPSEIVSNISAMDVGDKVFLRDLDIPE 205 >gi|293567818|ref|ZP_06679159.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] gi|291589403|gb|EFF21210.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] Length = 202 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ T++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKVESTPISFDGLTLSK-LLREHGANTVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESVGAKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVVDLPKNDDYKFVTDSEEQIAAVVA 180 >gi|145627769|ref|ZP_01783570.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|145630952|ref|ZP_01786728.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145639243|ref|ZP_01794849.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145641796|ref|ZP_01797372.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|319897302|ref|YP_004135497.1| 50S ribosomal subunit protein l25 [Haemophilus influenzae F3031] gi|144979544|gb|EDJ89203.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|144983419|gb|EDJ90895.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145271546|gb|EDK11457.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145273610|gb|EDK13480.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.4-21] gi|309751124|gb|ADO81108.1| 50S ribosomal protein L25 [Haemophilus influenzae R2866] gi|317432806|emb|CBY81171.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3031] Length = 95 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 51/89 (57%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L + + V V + Q P L+H DF Sbjct: 64 LVVDGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|325849223|ref|ZP_08170674.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480223|gb|EGC83290.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 214 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L + R+ VGK LR+ +P ++YG + + +++D K L S+ +TI+ L Sbjct: 6 LKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKVL-SQAGTSTIIDL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK---SPGIKQG 124 D+ E V V+ KDYQ+ P H DF ++ + V VPV + P + Sbjct: 65 DLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIRVEPSV--- 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 L V + C IP V + +++IGD+ + D+ + Sbjct: 122 --LVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFIVADLDI 162 >gi|223949451|gb|ACN28809.1| unknown [Zea mays] Length = 148 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 51/90 (56%) Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+P D S +++ ++ EG+ + V +PV F ++ PG+K+GG L + + Sbjct: 32 VLPIKVHRDENSGNILNLVMVKADEGTMLKVDLPVEFKGKDACPGLKKGGFLQKIRTSLV 91 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 LCPA +IP I VDL +L +GD + M DI Sbjct: 92 YLCPAEHIPPKIEVDLTNLDVGDRVLMHDI 121 >gi|302770773|ref|XP_002968805.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] gi|300163310|gb|EFJ29921.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] Length = 264 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (8%) Query: 60 FMTTILTLDIGKE----------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDL 232 >gi|302784798|ref|XP_002974171.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] gi|300158503|gb|EFJ25126.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] Length = 264 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (8%) Query: 60 FMTTILTLDIGKE----------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDL 232 >gi|197725521|gb|ACH72973.1| 5S rRNA-binding protein [Aquifex aeolicus] Length = 202 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 5/181 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + K+ + R K + R+ G +P IYG + K ++ KD + + + F+ Sbjct: 2 RRVKVKLLPRKPGRKSDLKRKRREGWLPVEIYGKGVENKHAWINVKDFASLPHGEAFL-- 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + ++ E + KD Q + + IH D +S + V VP+ F+ G++ Sbjct: 60 -IEAELDGETRVCLLKDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVG--TPAGVEA 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG V H +++ P IP+ I VD++ L +G+++H+ DI PE + T+A Sbjct: 117 GGTFEPVMHTLTIKAPPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDNPEETVAV 176 Query: 184 I 184 + Sbjct: 177 V 177 >gi|145352002|ref|XP_001420348.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580582|gb|ABO98641.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 239 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 15/183 (8%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKP-IALSAKD---------- 50 D + L +R G S+ R+ G++P +++ S+ I + ++ Sbjct: 33 DARGVVLRCALRVDGGTASSTRARREGRVPGVVFAPGSERGTMITVCEREMNAAVRKHTL 92 Query: 51 --ISKRLYSKNFMTTILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTV 106 ++ ++ TT T + E V + K Q+ + ++ + FL+V + V V Sbjct: 93 AGVACEVFDLEVQTTTATGEESGETRRVRALAKQVQMHAYNQMVDNVCFLEVKPETEVKV 152 Query: 107 HVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 VPV E+ SPG+K+GG + ++ V + C +++IP +D++ L G I + D+ Sbjct: 153 RVPVATQGEDVSPGVKRGGFVQIMRQTVPVRCRSDSIPKRFLMDVSTLDAGKVIKIGDVT 212 Query: 167 LPE 169 +PE Sbjct: 213 VPE 215 >gi|239501213|ref|ZP_04660523.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii AB900] gi|226736751|sp|A3M2X2|RL25_ACIBT RecName: Full=50S ribosomal protein L25 gi|193076600|gb|ABO11266.2| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|322507005|gb|ADX02459.1| rplY [Acinetobacter baumannii 1656-2] gi|323516872|gb|ADX91253.1| 50S ribosomal protein L25 [Acinetobacter baumannii TCDC-AB0715] Length = 98 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 9 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNAFFEEVVEIK 68 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 69 VGDKVENVKIQALQRHPAKNTPMHADF 95 >gi|257899451|ref|ZP_05679104.1| ribosomal protein L25 [Enterococcus faecium Com15] gi|257837363|gb|EEV62437.1| ribosomal protein L25 [Enterococcus faecium Com15] Length = 202 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 3/163 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++PA++YG + PI+ +SK L ++ ++T+DI + V+ + Q Sbjct: 21 LRHEGKVPAVVYGYKIESTPISFDGLTLSK-LLREHGANKVITMDIDGQKVNTLVHKIQT 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + ++ HA+FL V+ + V + +S G+K GG L + V + + + Sbjct: 80 NTFTNHFEHAEFLSVN--MSEETEVETEVVLVGESVGVKSGGVLAQNLYTVVVSATPDKL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 P+ I VD+ +L++GDSI + D+ + ++ IA +VA Sbjct: 138 PERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAVVA 180 >gi|19552165|ref|NP_600167.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|62389830|ref|YP_225232.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|71153139|sp|Q8NRV2|RL25_CORGL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21323705|dbj|BAB98332.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] gi|41325165|emb|CAF19646.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] Length = 200 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 7/185 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMT 62 K + A +R + GKGSAR R GQIPA++YG ++ + + + + L + + Sbjct: 3 KYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTIDHRTFAA-LVRQEGVN 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + + K + ++ + H D L + G V V VPV + +PG Sbjct: 62 AVLELDIEGQKQLTMIKHIDQNVLTFHIDHLDLLAIKRGEKVEVDVPV-IVEGEPAPGTM 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + E +L +IP+ TV + L++G I DI+L T+ + I Sbjct: 121 WVQDADTIKVEADVL----SIPEEFTVSIEGLELGAQITAADIKLEGDTTLVEDPETLIV 176 Query: 183 TIVAP 187 IV P Sbjct: 177 NIVLP 181 >gi|89256299|ref|YP_513661.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115314748|ref|YP_763471.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|156502367|ref|YP_001428432.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367634|ref|ZP_04983655.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|290953135|ref|ZP_06557756.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|295313663|ref|ZP_06804247.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|109893364|sp|Q2A3P1|RL25_FRATH RecName: Full=50S ribosomal protein L25 gi|122325232|sp|Q0BM50|RL25_FRATO RecName: Full=50S ribosomal protein L25 gi|166223681|sp|A7NBX3|RL25_FRATF RecName: Full=50S ribosomal protein L25 gi|89144130|emb|CAJ79389.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115129647|gb|ABI82834.1| ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|134253445|gb|EBA52539.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|156252970|gb|ABU61476.1| Ribosomal L25p family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 96 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 50/91 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F ++ +TL Sbjct: 6 LKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKEFFSSEITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 DI + VI K Q P LIHADF++V Sbjct: 66 DIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|293609064|ref|ZP_06691367.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|292829637|gb|EFF87999.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|325121162|gb|ADY80685.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus PHEA-2] Length = 98 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ IPAIIYG ++P + L +++ K L S F ++ + Sbjct: 9 QARAEDKQGKGASRRLRREALIPAIIYGGNAEPVTVTLELRELVKALESNAFFEEVVEIK 68 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 69 VGDKVENVKIQALQRHPSKNTPMHADF 95 >gi|257465408|ref|ZP_05629779.1| 50S ribosomal protein L25 [Actinobacillus minor 202] gi|257451068|gb|EEV25111.1| 50S ribosomal protein L25 [Actinobacillus minor 202] Length = 95 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 49/92 (53%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F +LT Sbjct: 4 KFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNVNNAQVHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF +V Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|315274580|ref|ZP_07869458.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] gi|313615790|gb|EFR89040.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] Length = 124 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++P IIYG S+ P+++ + ++ K + N + ++ + + ++V+ +YQ+ Sbjct: 21 LRSEGKVPGIIYGYKSENVPVSVDSLELIKAV-RDNGRNAVFSVTVDGKKLNVLLHEYQV 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 DP+ D+L+H D L V V V V + + +PG+K GG L Sbjct: 80 DPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQ 122 >gi|52425171|ref|YP_088308.1| 50S ribosomal protein L25 [Mannheimia succiniciproducens MBEL55E] gi|68053090|sp|Q65TI7|RL25_MANSM RecName: Full=50S ribosomal protein L25 gi|52307223|gb|AAU37723.1| RplY protein [Mannheimia succiniciproducens MBEL55E] Length = 95 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 49/89 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG D I L+ +++ +F + ++T Sbjct: 4 KFNAEVRSAQGKGASRRLRHNGQIPAIVYGGNEDAVSIVLNHDELNNAQAHDSFYSEVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L I + V V + Q P L+H DF Sbjct: 64 LVINGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|51893432|ref|YP_076123.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153113|sp|Q67M16|RL252_SYMTH RecName: Full=50S ribosomal protein L25 2; AltName: Full=General stress protein CTC 2 gi|51857121|dbj|BAD41279.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 194 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 6/150 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R G ++R LR+ G +P IIYG +P +++ + + +RL + ++ Sbjct: 2 QLEATPRG-TGSRASRRLRQAGFVPGIIYGPGVEPLAVSVRSTQL-ERLVERQGRGHLIH 59 Query: 67 LDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + E V+ K Q D ++ + H DFLQV T+T+ VP+ + E ++ ++G Sbjct: 60 VQVEGEANPRQVVIKQLQRDILTQQVTHVDFLQVDMNRTITLTVPIVVVGEEQA--RRRG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDL 154 + EV + C IP+++T+D++ L Sbjct: 118 LLITHELDEVEVECRPTEIPEAVTLDVSGL 147 >gi|126640884|ref|YP_001083868.1| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|184157106|ref|YP_001845445.1| 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260555727|ref|ZP_05827947.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332872682|ref|ZP_08440650.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] gi|183208700|gb|ACC56098.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260410638|gb|EEX03936.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332739211|gb|EGJ70070.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] Length = 103 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 14 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNAFFEEVVEIK 73 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 74 VGDKVENVKIQALQRHPAKNTPMHADF 100 >gi|291277022|ref|YP_003516794.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] gi|290964216|emb|CBG40065.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] Length = 178 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K + LR +G + A IYG + A D + + SK + + + Sbjct: 2 LEGKVRESISKAEVKALRNDGYLIANIYGKGVENIHCAFKLNDFIRTIKSKTHL--VFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +++ V+ ++YQ DPV+ ++H D + +G +PV+ + G+K G L Sbjct: 60 SVGGKMLDVVVQEYQKDPVTSNILHVDLMLAQKGVVAKYKIPVKAVGV--PVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VS+ ++ + +D++ L +GDSI + D LPE Sbjct: 118 IYPKKRVSVQAAPEHLINVYELDVSKLDVGDSILVRD--LPE 157 >gi|163789595|ref|ZP_02184033.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] gi|159875127|gb|EDP69193.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] Length = 203 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 10/184 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTTI 64 K++A++R +VG +A RK ++ A+I G P++L +KD+ L + KN + + Sbjct: 2 KVNAILRTEVGSAAANRDRKEKKVTAVINGKGITSTPVSLDSKDLDNVLKTLGKNAIFDV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN-ENKSPGIKQ 123 + D E VI K+ Q + + ++ + V +G +TV V + N EN GI Sbjct: 62 VVKD--GETHQVIIKEIQSATLVNQILDVELQVVQKGEKLTVTVQINVENAENVKRGI-- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 ++ +E+ + NIP T+D L+IGDS+ + DI++ + + +S T+ + Sbjct: 118 ---VSQTLNELEIETLPANIPTEFTLDACALEIGDSLTVSDIKVDKSITVLSDPEQTVVS 174 Query: 184 IVAP 187 ++ P Sbjct: 175 VLPP 178 >gi|172057598|ref|YP_001814058.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sibiricum 255-15] gi|226736322|sp|B1YGY0|RL25_EXIS2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171990119|gb|ACB61041.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sibiricum 255-15] Length = 225 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 7/166 (4%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISK--RLYSKNFMTTILTLDIGKELVHVIPK 79 + LR G+ ++YG + PI+ K++ K R + +N + + L IG + V+ + Sbjct: 19 KQLRHEGKALGVVYGYKVESTPISFDEKELVKVIRDHGENVL---VALQIGGKKVNTLIN 75 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 +D + + H +F+ V V + + E + G K GG L+ +V++ Sbjct: 76 KLDMDIFTPTIKHVEFIAVKMDEETEVETDIVLVGE--AAGAKLGGFLSQTLFKVTVAAT 133 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +P+ I VD+ +L IGDSI + D+ + +++ +I +A +V Sbjct: 134 PDKLPERIEVDVTELAIGDSITVADLPEEKDFRVVTEGDIQVAAVV 179 >gi|213156613|ref|YP_002318274.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|215484443|ref|YP_002326676.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] gi|301348151|ref|ZP_07228892.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB056] gi|301512834|ref|ZP_07238071.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB058] gi|301596892|ref|ZP_07241900.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB059] gi|226736701|sp|B7GYQ9|RL25_ACIB3 RecName: Full=50S ribosomal protein L25 gi|226736702|sp|B7I7B6|RL25_ACIB5 RecName: Full=50S ribosomal protein L25 gi|213055773|gb|ACJ40675.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|213986765|gb|ACJ57064.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] Length = 98 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 9 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNVFFEEVVEIK 68 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 69 VGDKVENVKIQALQRHPAKNTPMHADF 95 >gi|56707795|ref|YP_169691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670266|ref|YP_666823.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118497599|ref|YP_898649.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida U112] gi|134302021|ref|YP_001121990.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|187931857|ref|YP_001891842.1| 50S ribosomal protein L25 [Francisella tularensis subsp. mediasiatica FSC147] gi|195536299|ref|ZP_03079306.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208779400|ref|ZP_03246746.1| ribosomal L25p family [Francisella novicida FTG] gi|224456866|ref|ZP_03665339.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|254369280|ref|ZP_04985292.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|254370293|ref|ZP_04986298.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254372963|ref|ZP_04988452.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida GA99-3549] gi|254374414|ref|ZP_04989896.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|254874608|ref|ZP_05247318.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|71153143|sp|Q5NH01|RL25_FRATT RecName: Full=50S ribosomal protein L25 gi|123169478|sp|Q14IF3|RL25_FRAT1 RecName: Full=50S ribosomal protein L25 gi|166223682|sp|A0Q6N0|RL25_FRATN RecName: Full=50S ribosomal protein L25 gi|166223683|sp|A4IY68|RL25_FRATW RecName: Full=50S ribosomal protein L25 gi|226736324|sp|B2SH55|RL25_FRATM RecName: Full=50S ribosomal protein L25 gi|56604287|emb|CAG45308.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320599|emb|CAL08691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118423505|gb|ABK89895.1| 50S ribosomal protein L25 [Francisella novicida U112] gi|134049798|gb|ABO46869.1| ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|151568536|gb|EDN34190.1| hypothetical protein FTBG_00046 [Francisella tularensis subsp. tularensis FSC033] gi|151570690|gb|EDN36344.1| 50S ribosomal protein L25 [Francisella novicida GA99-3549] gi|151572134|gb|EDN37788.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|157122230|gb|EDO66370.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|187712766|gb|ACD31063.1| 50S ribosomal L25p family [Francisella tularensis subsp. mediasiatica FSC147] gi|194372776|gb|EDX27487.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208745200|gb|EDZ91498.1| ribosomal L25p family [Francisella novicida FTG] gi|254840607|gb|EET19043.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158969|gb|ADA78360.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis NE061598] gi|332678303|gb|AEE87432.1| LSU ribosomal protein L25p [Francisella cf. novicida Fx1] Length = 96 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 50/91 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F ++ +TL Sbjct: 6 LKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 DI + VI K Q P LIHADF++V Sbjct: 66 DIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|312876056|ref|ZP_07736045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] gi|311797254|gb|EFR13594.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] Length = 198 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 9/175 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 RD K + LRK G IP + YG+ P +S K+ K + K I +++D GK Sbjct: 10 RDVFTKSNLNKLRKEGYIPTVAYGDDIKSLPGYVSKKEFEKLYHQKGLAGKIKISID-GK 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN--KSPGIKQGGKLNV 129 E +I K+ Q +IH DF +SE + V VP+ F N KS G+ +++ Sbjct: 69 ERTALI-KEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKSRGLVLQRQMDT 127 Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V E+ L +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 128 V--EIEGL--PKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|315634254|ref|ZP_07889541.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] gi|315476844|gb|EFU67589.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] Length = 128 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 50/92 (54%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ F + ++T Sbjct: 37 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDEVNNAQAHDAFYSDVIT 96 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q P L+H DF +V Sbjct: 97 LVIDGKEVAVKVQAMQRHPFKPKLVHVDFKRV 128 >gi|328675846|gb|AEB28521.1| LSU ribosomal protein L25p [Francisella cf. novicida 3523] Length = 96 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 50/91 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F ++ +TL Sbjct: 6 LKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 DI + VI K Q P LIHADF++V Sbjct: 66 DIDGKEEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|169634104|ref|YP_001707840.1| 50S ribosomal protein L25 [Acinetobacter baumannii SDF] gi|169152896|emb|CAP01934.1| 50S ribosomal protein L25 [Acinetobacter baumannii] Length = 103 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 14 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVTVTLELRELVKALESNAFFEKVVEIK 73 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 74 VGDKVENVKIQALQRHPAKNTPMHADF 100 >gi|33152342|ref|NP_873695.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] gi|68053197|sp|Q7VLY6|RL25_HAEDU RecName: Full=50S ribosomal protein L25 gi|33148565|gb|AAP96084.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] Length = 95 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 49/92 (53%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNVQIHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + ++ V V + Q P L+H DF +V Sbjct: 64 IVLAEKEVQVKVQAIQRHPTKPKLLHLDFKRV 95 >gi|114562619|ref|YP_750132.1| ribosomal protein L25 [Shewanella frigidimarina NCIMB 400] gi|122300188|sp|Q084M1|RL25_SHEFN RecName: Full=50S ribosomal protein L25 gi|114333912|gb|ABI71294.1| LSU ribosomal protein L25P [Shewanella frigidimarina NCIMB 400] Length = 95 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 50/89 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R ++GKGS+R LR G++PA+IYG +P I KDI + +F TT LT+ Sbjct: 5 INAVTRTEIGKGSSRRLRHAGKVPAVIYGPGKEPVSIKFEHKDIINIQLNDDFYTTDLTV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 I + V V K Q ++ H DF+ Sbjct: 65 SIEGKEVKVRVKAIQRHAFKQLVEHIDFM 93 >gi|269838096|ref|YP_003320324.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] gi|269787359|gb|ACZ39502.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] Length = 218 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 7/165 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R +GK R LR+ G +P +IYG + P+P+A+ K+ RLY TT++ Sbjct: 6 QLQAQQRAVLGK-KVRQLRRQGLLPGVIYGPAVETPRPVAIDGKEFD-RLYRNVGPTTLV 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ V + D + L+H DF + V V + + E + G Sbjct: 64 DLDLDGTTHTVFIRGVDRDSLGKELLHVDFYAPNLNEPTVVSVAINVVGELPA---SVDG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPE 169 L +V + NIP I VD++ L + +IH+ D+++PE Sbjct: 121 VLTYGRQDVEIRALPENIPSQIEVDISGLTNENRAIHVSDLQVPE 165 >gi|240948487|ref|ZP_04752862.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] gi|240297150|gb|EER47716.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] Length = 95 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 49/92 (53%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F +LT Sbjct: 4 KFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNLNNAQIHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF +V Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|297587210|ref|ZP_06945855.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] gi|297575191|gb|EFH93910.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] Length = 211 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 3/159 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL RD+VG + R LR +P +IYG +P + + K++ ++++ ++++ Sbjct: 5 KLDMQKRDEVGSNAVRKLRVKEMVPGVIYGKDLEPINVCVDEKEL-RKVHLMAGTSSLID 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + E VI ++ Q P + +H DF + G +PV + E + Q Sbjct: 64 VKVDGEDHTVIIREVQKHPFKNQYVHVDFKAIKMGEVANFTIPV--VLEGRDEIRVQPSV 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 L + E+ + C N+P+ V + D++IG+++ ++D+ Sbjct: 122 LMQLLDEIEIECLPKNLPNEAVVSVVDMQIGETLEVKDL 160 >gi|169796981|ref|YP_001714774.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332852069|ref|ZP_08433896.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332867467|ref|ZP_08437620.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] gi|169149908|emb|CAM87802.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332729441|gb|EGJ60780.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332733884|gb|EGJ65029.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] Length = 103 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 14 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNVFFEEVVEIK 73 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 74 VGDKVENVKIQALQRHPAKNTPMHADF 100 >gi|332290495|ref|YP_004421347.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] gi|330433391|gb|AEC18450.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] Length = 94 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 50/89 (56%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R+ GKG++R LRK G+IPAI+YG P I L+ +++ +F + ++T Sbjct: 3 KFNAEIRETQGKGASRRLRKAGKIPAIVYGGNEAPVSIVLNHNELNNAQVEDSFYSEVIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L I + V V + Q P L+H DF Sbjct: 63 LVINGKEVAVKVQAMQRHPFKPKLVHIDF 91 >gi|152979370|ref|YP_001344999.1| 50S ribosomal protein L25 [Actinobacillus succinogenes 130Z] gi|171704325|sp|A6VQ17|RL25_ACTSZ RecName: Full=50S ribosomal protein L25 gi|150841093|gb|ABR75064.1| ribosomal protein L25 [Actinobacillus succinogenes 130Z] Length = 95 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 49/89 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ +F + ++T Sbjct: 4 KFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQVHDSFYSDVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L I + V V + Q P L+H DF Sbjct: 64 LVIDGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|149189635|ref|ZP_01867917.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] gi|148836447|gb|EDL53402.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] Length = 92 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR GQ PAI+YG + P IAL+ D+ ++ F I T Sbjct: 2 KFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIALNHDDVINQMDKPAFYEGI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|262280067|ref|ZP_06057852.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] gi|262260418|gb|EEY79151.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] Length = 98 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 47/87 (54%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR IPAIIYG ++P I L + + K L + F ++ + Sbjct: 9 QARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRQLVKALENNAFFQEVIEIQ 68 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 69 VGDKVENVKIQALQRHPAKNTPMHADF 95 >gi|260550954|ref|ZP_05825159.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] gi|260405902|gb|EEW99389.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] Length = 103 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F ++ + Sbjct: 14 QARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVSVTLELRELVKALESNAFFEEVVEIK 73 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 74 VGDKVENVKIQALQRHPSKNTPMHADF 100 >gi|301156484|emb|CBW15955.1| 50S ribosomal subunit protein L25 [Haemophilus parainfluenzae T3T1] Length = 95 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 49/89 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F + ++T Sbjct: 4 KFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQVHDSFYSDVIT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L + + V V + Q P L+H DF Sbjct: 64 LVVEGKEVAVKVQAMQRHPFKPKLVHIDF 92 >gi|71153114|sp|Q6F8I8|RL25_ACIAD RecName: Full=50S ribosomal protein L25 Length = 98 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 8 LSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R DK GKG++R LR+ +PAIIYG ++P + + +++ K L + F ++ Sbjct: 6 LNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENNAFFEEVV 65 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + +G ++ +V + Q P + +HADF Sbjct: 66 EVKVGDKVENVKIQALQRHPAKNTPMHADF 95 >gi|57339950|gb|AAW49962.1| hypothetical protein FTT0675 [synthetic construct] Length = 131 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 50/91 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F ++ +TL Sbjct: 32 LKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITL 91 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 DI + VI K Q P LIHADF++V Sbjct: 92 DIDGKQEKVIIKALQRHPYKVKLIHADFMRV 122 >gi|328958225|ref|YP_004375611.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] gi|328674549|gb|AEB30595.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] Length = 209 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 96/183 (52%), Gaps = 8/183 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTTI 64 K++A +R +VG +A R+ ++ A++ G + L +K++ L + KN + + Sbjct: 8 KVNATLRTEVGSSAANRARREKKVTAVVNGKGITSTAVLLDSKELDNVLKTLGKNAIFDV 67 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 D E VI K+ Q + + ++ + + +G +TV VP+ +N + +K+G Sbjct: 68 AVQD--GETHQVIIKEIQNATLVNQILDVELQVIQKGEKLTVTVPINVLN---ADAVKRG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ +E+ + NIP TVD++ L+IGD++++ DI++ + + +S ++ ++ Sbjct: 123 -IVSQTLNELEIETLPANIPTEFTVDVSKLEIGDALYVSDIKVDKAITVLSDAEQSVVSV 181 Query: 185 VAP 187 + P Sbjct: 182 LPP 184 >gi|303239071|ref|ZP_07325601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] gi|302593409|gb|EFL63127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] Length = 191 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 4/160 (2%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 K SA+ +RK G +P IYG+ D I + K+I++ L S + EL V Sbjct: 11 KESAKRIRKLGYVPCSIYGSGVDRNMDIQIEDKEINRFLKSHSIGAKAKVKINASELPCV 70 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 I K Q +P+S +H +F SE V V VP +F + K LN++ E+ + Sbjct: 71 I-KSIQYEPISSKPMHIEFYASSEDKLVKVKVPFKF--KGKEQLFSNKLVLNILEDEIEI 127 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 ++P+ + ++++ +K G I MEDI LPE +S+ Sbjct: 128 QGVLKDLPEFVEINVSLMKDGSVITMEDIALPEGIRLLSR 167 >gi|262369401|ref|ZP_06062729.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] gi|262315469|gb|EEY96508.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] Length = 101 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 46/81 (56%) Query: 17 GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 GKG++R LR Q+PAIIYG + P + L +++ K L + F ++ + +G ++ V Sbjct: 20 GKGASRRLRHAAQVPAIIYGGTAKPVAVTLELRELVKALENNAFFEEVVEIKVGDKVESV 79 Query: 77 IPKDYQLDPVSDILIHADFLQ 97 K Q P + +HADF++ Sbjct: 80 KIKALQRHPAKNTPMHADFVR 100 >gi|325578128|ref|ZP_08148263.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] gi|325159864|gb|EGC71993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] Length = 97 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 49/89 (55%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F + ++T Sbjct: 6 KFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQAHDSFYSDVIT 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 L + + V V + Q P L+H DF Sbjct: 66 LVVEGKEVAVKVQAMQRHPFKPKLVHIDF 94 >gi|168181809|ref|ZP_02616473.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|237796572|ref|YP_002864124.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum Ba4 str. 657] gi|182675191|gb|EDT87152.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|229262239|gb|ACQ53272.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 178 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 8/164 (4%) Query: 24 LRKNGQIPAIIYG-NMSDPKPIALSAKDIS-KRLYSKNFMTTILTLDIGKELVHVIPKDY 81 +R++G++P IIYG N+S+ + +I + S+ + ++ V+ K+ Sbjct: 17 VRRDGKVPGIIYGKNLSN---LMFEVGEIELNNMISQVGEHGVTDINYEGTDYKVLIKEV 73 Query: 82 QLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q DPV +IH D V+ S + +P+ F + +K+GG + + V + CP Sbjct: 74 QKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGD--ELIMKKGGVVQKEKNSVKVRCPE 131 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 132 EKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|322807425|emb|CBZ04999.1| ribosomal protein L25 general stress protein [Clostridium botulinum H04402 065] Length = 178 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 14/167 (8%) Query: 24 LRKNGQIPAIIYGN-----MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +R++G++P IIYG M + I L++ + S+ + ++ V+ Sbjct: 17 VRRDGKVPGIIYGKNLNNLMFEVGEIELNS------MISQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V+ S + +P+ F ++ +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDDLI--MKKGGIVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|260778863|ref|ZP_05887755.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] gi|260605027|gb|EEX31322.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] Length = 92 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR GQ PAI+YG + P I L+ D+ ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIVLNHDDVVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|168179611|ref|ZP_02614275.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226950546|ref|YP_002805637.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum A2 str. Kyoto] gi|182669554|gb|EDT81530.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226843949|gb|ACO86615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] Length = 178 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 14/167 (8%) Query: 24 LRKNGQIPAIIYGN-----MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +R++G++P IIYG M + I L++ + S+ + ++ V+ Sbjct: 17 VRRDGKVPGIIYGKNLNNLMFEVGEIELNS------MISQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V+ S + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGD--ELIMKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|299771339|ref|YP_003733365.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] gi|298701427|gb|ADI91992.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] Length = 98 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 48/87 (55%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A DK GKG++R LR IPAIIYG ++P I L +++ K L + F ++ + Sbjct: 9 QARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRELVKALENNAFFEEVVEIK 68 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADF 95 +G ++ +V + Q P + +HADF Sbjct: 69 VGDKVENVKIQALQRHPSKNTPMHADF 95 >gi|168187378|ref|ZP_02622013.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169294743|gb|EDS76876.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 199 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 9/182 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + ++++ + I L Sbjct: 4 LKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVLKHGEYGGI-DL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN---KSPGIKQG 124 I I K+ Q DPV+ ++H D ++ + + +P+ FI E K I Q Sbjct: 63 QIDNNHHKAILKEVQKDPVTKKILHIDLQEIDKDEVIQTEIPINFIGEEFIAKRGDIVQK 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 K N + + +NIP SI VD++ + GD + D+ + + + +N +A + Sbjct: 123 EKSN-----IKVQGKYDNIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMNTILAVV 177 Query: 185 VA 186 + Sbjct: 178 MG 179 >gi|50085939|ref|YP_047449.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] gi|49531915|emb|CAG69627.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] Length = 103 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 8 LSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R DK GKG++R LR+ +PAIIYG ++P + + +++ K L + F ++ Sbjct: 11 LNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENNAFFEEVV 70 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + +G ++ +V + Q P + +HADF Sbjct: 71 EVKVGDKVENVKIQALQRHPAKNTPMHADF 100 >gi|260768249|ref|ZP_05877183.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|260616279|gb|EEX41464.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|315179957|gb|ADT86871.1| 50S ribosomal protein L25 [Vibrio furnissii NCTC 11218] Length = 92 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G PAI+YG + P I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRNTGNFPAIVYGGEAAPVSITLNHDDIVNQMDKPEFYEAIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|164686888|ref|ZP_02210916.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] gi|164604278|gb|EDQ97743.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] Length = 192 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 11/166 (6%) Query: 24 LRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQ 82 +R G++PAI+YG ++ P P ++ +++ L S +++L+L + ++ + + K+ Q Sbjct: 18 VRMKGEVPAIMYGQSLEKPIPCQITKRELIDLLASD---SSVLSLKLNDKVENCVLKEVQ 74 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 D +I +H DF V +G +V + VPVRF + L+ + EV L + Sbjct: 75 RDAFGNI-VHLDFQYVKKGDSVKLKVPVRFAGTESLDARRL--LLDDIVTEVQLQGNPSE 131 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPI 188 +P+ I V++ L+ G I +D+ +PE ++++ T+VA I Sbjct: 132 MPEHIEVNVEGLEHGAQILAKDLVIPETL----KMDLDPETVVARI 173 >gi|113461016|ref|YP_719083.1| 50S ribosomal protein L25 [Haemophilus somnus 129PT] gi|170717588|ref|YP_001784672.1| 50S ribosomal protein L25 [Haemophilus somnus 2336] gi|123327292|sp|Q0I3J3|RL25_HAES1 RecName: Full=50S ribosomal protein L25 gi|189042361|sp|B0UU73|RL25_HAES2 RecName: Full=50S ribosomal protein L25 gi|112823059|gb|ABI25148.1| LSU ribosomal protein L25P [Haemophilus somnus 129PT] gi|168825717|gb|ACA31088.1| ribosomal protein L25 [Haemophilus somnus 2336] Length = 95 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A +R K GKG++R LR NGQIPAI+YG P I L+ +++ +F + + Sbjct: 4 KFNAEVRSKQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQIHDSFYSDTII 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + + V + Q P L+H DF +V Sbjct: 64 LVIEGKEISVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|148381066|ref|YP_001255607.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153931183|ref|YP_001385439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153935360|ref|YP_001388846.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|148290550|emb|CAL84678.1| putative general stress protein [Clostridium botulinum A str. ATCC 3502] gi|152927227|gb|ABS32727.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152931274|gb|ABS36773.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] Length = 178 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R++G++P IIYG + + +++ + S+ + ++ V+ K+ Q Sbjct: 17 VRRDGKVPGIIYGKNLNNLMFEVGEIELN-NMISQVGEHGVTDINYEGTDYKVLIKEVQK 75 Query: 84 DPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 DPV +IH D V+ S + +P+ F ++ +K+GG + + V + CP Sbjct: 76 DPVKKNVIHIDLENVTNSSNLINAEIPILFSGDDLI--MKKGGIVQKEKNSVKVRCPEEK 133 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 134 LPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|327484250|gb|AEA78657.1| LSU ribosomal protein L25p [Vibrio cholerae LMA3894-4] Length = 92 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F I+ Sbjct: 2 KFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF+++ Sbjct: 62 VIDGQE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|28210591|ref|NP_781535.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium tetani E88] gi|71153136|sp|Q896W8|RL25_CLOTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28203029|gb|AAO35472.1| LSU ribosomal protein L25P [Clostridium tetani E88] Length = 193 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 7/177 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GK + RK G IP IIYG + + I + L K + + Sbjct: 5 LIATERNEKGKTA----RKKGFIPGIIYGKDREGQSINFERGKLIAFLKEKGEKSK-MNF 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E I K+ D V+ +IH D +VS V +P+ F E + K+ + Sbjct: 60 QLNGENKQGIIKEVGRDAVTSSIIHIDIQEVSALEKVRWTIPIFF--EGREQLKKKELYI 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V EV + A++IP++IT+++ +L++G+ + ++D+ + ++L TIA I Sbjct: 118 QVYLTEVEVEGKASDIPNNITLNVGNLELGEEVKVKDLNIGSNIRIFNELENTIAII 174 >gi|51893419|ref|YP_076110.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153112|sp|Q67M29|RL251_SYMTH RecName: Full=50S ribosomal protein L25 1; AltName: Full=General stress protein CTC 1 gi|51857108|dbj|BAD41266.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 205 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 14/154 (9%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-KRLYSKNFMTTIL 65 +L A R+ G ++R LR+ G +P IIYG +P +A+S I +RL ++ ++ Sbjct: 6 QLEARTRET-GSRASRRLRQAGFVPGIIYGPGVEP--LAISVPTIQLERLVDRHGRGHLI 62 Query: 66 TLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + E V+ K Q D ++ + H DFLQV T+T+ VP+ + E ++ K+ Sbjct: 63 NAHVEGEANPRQVVIKQLQRDVLTAQVTHVDFLQVDIHRTITLTVPIAVVGEEQA---KR 119 Query: 124 GGKLNVVCH---EVSLLCPANNIPDSITVDLNDL 154 G +V H EV + C IP++IT+D++ + Sbjct: 120 RGL--IVTHELAEVEIKCRPTEIPEAITLDISGV 151 >gi|32035070|ref|ZP_00135129.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207971|ref|YP_001053196.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae L20] gi|303250281|ref|ZP_07336481.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252046|ref|ZP_07533946.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166223658|sp|A3MZK5|RL25_ACTP2 RecName: Full=50S ribosomal protein L25 gi|126096763|gb|ABN73591.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650897|gb|EFL81053.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860515|gb|EFM92528.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 95 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 47/92 (51%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF +V Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|15827041|ref|NP_301304.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae TN] gi|221229519|ref|YP_002502935.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae Br4923] gi|13633840|sp|Q9CD48|RL25_MYCLE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13092588|emb|CAC29753.1| putative 50S ribosomal protein L25 [Mycobacterium leprae] gi|219932626|emb|CAR70338.1| putative 50S ribosomal protein L25 [Mycobacterium leprae Br4923] Length = 215 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KLS +R GKG++R R++G++PA++YG+ +P+ + L A S L +LT Sbjct: 8 KLSVSVRTNTGKGASRRARRDGKVPAVLYGHGEEPQHLELPAHAFSAVLRHVG-TNAVLT 66 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 L++ GKE + + K + P+ ++HAD L V G + Sbjct: 67 LEVAGKEQL-ALTKAIDVHPIRHTIMHADLLVVRSGEKI 104 >gi|254360491|ref|ZP_04976640.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261492283|ref|ZP_05988846.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494504|ref|ZP_05990990.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091031|gb|EDN73036.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261309888|gb|EEY11105.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312062|gb|EEY13202.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 95 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ +F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQVHDSFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 + + + V + Q P L+H DF Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDF 92 >gi|300858120|ref|YP_003783103.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|300685574|gb|ADK28496.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|302205841|gb|ADL10183.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis C231] gi|302330399|gb|ADL20593.1| 50S ribosomal protein L25/ general stress protein Ctc [Corynebacterium pseudotuberculosis 1002] gi|308276076|gb|ADO25975.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis I19] Length = 205 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 7/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +SA R + GKG AR LR GQ+P +IYG ++ P ++ ++ L + +L Sbjct: 7 ISAQPRTEFGKGFARRLRAAGQVPGVIYGADIESPIHFSVDILELHALLRAHG-SNAVLD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + K + ++ H D L + G V V VPV E +PG Sbjct: 66 LDIEGEKHLTMVKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVALQGET-APGTTLIQD 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + V E +L +IP+ I + L++ + D+ LP T+ ++ IAT+ Sbjct: 125 ADTVLVEADVL----SIPEEIAFSVEGLEVDAKVLAGDLSLPANTTLVADPEFVIATV 178 >gi|15641645|ref|NP_231277.1| 50S ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591191|ref|ZP_01678494.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121728910|ref|ZP_01681917.1| ribosomal protein L25 [Vibrio cholerae V52] gi|147673862|ref|YP_001217190.1| 50S ribosomal protein L25 [Vibrio cholerae O395] gi|153216905|ref|ZP_01950669.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|153801556|ref|ZP_01956142.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|153819731|ref|ZP_01972398.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|153823940|ref|ZP_01976607.1| ribosomal protein L25 [Vibrio cholerae B33] gi|153826166|ref|ZP_01978833.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|227081792|ref|YP_002810343.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|229523735|ref|ZP_04413140.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254226742|ref|ZP_04920317.1| ribosomal protein L25 [Vibrio cholerae V51] gi|254285416|ref|ZP_04960381.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|254848760|ref|ZP_05238110.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255744931|ref|ZP_05418881.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258621917|ref|ZP_05716947.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|258624936|ref|ZP_05719863.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|261211762|ref|ZP_05926049.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|262161784|ref|ZP_06030802.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262165815|ref|ZP_06033552.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262169654|ref|ZP_06037345.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262171350|ref|ZP_06039028.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262190569|ref|ZP_06048810.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262404058|ref|ZP_06080613.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297579219|ref|ZP_06941147.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|298498277|ref|ZP_07008084.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] gi|68053239|sp|Q9KRK0|RL25_VIBCH RecName: Full=50S ribosomal protein L25 gi|172047678|sp|A5F7P6|RL25_VIBC3 RecName: Full=50S ribosomal protein L25 gi|254801066|sp|C3LMW6|RL25_VIBCM RecName: Full=50S ribosomal protein L25 gi|9656153|gb|AAF94791.1| ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546946|gb|EAX57094.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121628796|gb|EAX61258.1| ribosomal protein L25 [Vibrio cholerae V52] gi|124114054|gb|EAY32874.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|124122883|gb|EAY41626.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|125620719|gb|EAZ49078.1| ribosomal protein L25 [Vibrio cholerae V51] gi|126509722|gb|EAZ72316.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|126518534|gb|EAZ75757.1| ribosomal protein L25 [Vibrio cholerae B33] gi|146315745|gb|ABQ20284.1| ribosomal protein L25 [Vibrio cholerae O395] gi|149740107|gb|EDM54272.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|150424688|gb|EDN16624.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|227009680|gb|ACP05892.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|227013548|gb|ACP09758.1| ribosomal protein L25 [Vibrio cholerae O395] gi|229337316|gb|EEO02333.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254844465|gb|EET22879.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255737402|gb|EET92797.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258582792|gb|EEW07614.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|258585855|gb|EEW10574.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|260839112|gb|EEX65744.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|261892426|gb|EEY38412.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262021888|gb|EEY40598.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262025531|gb|EEY44199.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262028516|gb|EEY47171.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262033556|gb|EEY52053.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262349090|gb|EEY98228.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297536813|gb|EFH75646.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|297542610|gb|EFH78660.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] Length = 92 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F I+ Sbjct: 2 KFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF+++ Sbjct: 62 VIDGQE-VKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|229508247|ref|ZP_04397752.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229511514|ref|ZP_04400993.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229515036|ref|ZP_04404496.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229518653|ref|ZP_04408096.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229520761|ref|ZP_04410184.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229529327|ref|ZP_04418717.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229607821|ref|YP_002878469.1| 50S ribosomal protein L25 [Vibrio cholerae MJ-1236] gi|229333101|gb|EEN98587.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229342316|gb|EEO07311.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229343342|gb|EEO08317.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229347741|gb|EEO12700.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229351479|gb|EEO16420.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229355752|gb|EEO20673.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229370476|gb|ACQ60899.1| LSU ribosomal protein L25p [Vibrio cholerae MJ-1236] Length = 97 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F I+ Sbjct: 7 KFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIVL 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF+++ Sbjct: 67 VIDGQE-VKVKPQDVQRHAYKPKVEHMDFIRI 97 >gi|170760837|ref|YP_001788437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169407826|gb|ACA56237.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 178 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 14/167 (8%) Query: 24 LRKNGQIPAIIYGN-----MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 +R++G++P IIYG M + I L++ + S+ + ++ V+ Sbjct: 17 VRRDGKVPGIIYGKNLNNLMFEVGEIELNS------MISQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V+ S V +P+ F + +K+GG + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLVNAEIPILFSGD--ELIMKKGGVVQKEKDSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|307245327|ref|ZP_07527415.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254280|ref|ZP_07536120.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258740|ref|ZP_07540472.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853668|gb|EFM85885.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862759|gb|EFM94713.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867091|gb|EFM98947.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 95 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF ++ Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|170757176|ref|YP_001782751.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169122388|gb|ACA46224.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra] Length = 178 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 4/162 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R++G++P IIYG + + +++ + S+ + ++ V+ K+ Q Sbjct: 17 VRRDGKVPGIIYGKNLNNLMFEVGEIELN-NMISQVGEHGVTDINYEGTDYKVLIKEVQK 75 Query: 84 DPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 DPV +IH D V+ S + +P+ F + +K+GG + + V + CP Sbjct: 76 DPVKKNVIHIDLENVTNSSNLINAEIPILFSGD--ELIMKKGGVVQKEKNSVKVRCPEEK 133 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 134 LPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|153938247|ref|YP_001392394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152934143|gb|ABS39641.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland] gi|295320385|gb|ADG00763.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613] Length = 178 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 4/162 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 +R++G++P I+YG + + +++ + S+ + ++ V+ K+ Q Sbjct: 17 VRRDGKVPGIVYGKNLNNLMFEVGEIELN-NMISQVGEHGVTDINYEGTDYKVLIKEVQK 75 Query: 84 DPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 DPV +IH D V+ S + +P+ F + +K+GG + + V + CP Sbjct: 76 DPVKKNVIHIDLENVTNSSNLINAEIPILFSGD--ELIMKKGGVVQKEKNSVKVRCPEEK 133 Query: 143 IPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 134 LPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|163801136|ref|ZP_02195036.1| 50S ribosomal protein L25 [Vibrio sp. AND4] gi|159175485|gb|EDP60282.1| 50S ribosomal protein L25 [Vibrio sp. AND4] Length = 92 Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +VGKG++R LR G+ PA++YG ++ I L DI ++ F I+ Sbjct: 2 KFEAVVRTEVGKGASRRLRHAGKFPAVVYGGEAEAVAIVLDHNDIVNQMDKPEFYEAIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|165975947|ref|YP_001651540.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149834|ref|YP_001968359.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252157|ref|ZP_07338325.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247493|ref|ZP_07529538.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249726|ref|ZP_07531705.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307256542|ref|ZP_07538323.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260973|ref|ZP_07542655.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263155|ref|ZP_07544776.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226736271|sp|B3GX65|RL25_ACTP7 RecName: Full=50S ribosomal protein L25 gi|226736272|sp|B0BU91|RL25_ACTPJ RecName: Full=50S ribosomal protein L25 gi|165876048|gb|ABY69096.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914965|gb|ACE61217.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648940|gb|EFL79128.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855996|gb|EFM88154.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858234|gb|EFM90311.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864952|gb|EFM96854.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869275|gb|EFN01070.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871517|gb|EFN03240.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 95 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 45/89 (50%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 + + + V + Q P L+H DF Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDF 92 >gi|256370610|ref|YP_003108435.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] gi|256009402|gb|ACU52762.1| ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] Length = 199 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 8/158 (5%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA--KDISKRLYSKNFMTTILTLDIGK 71 +K+ K S R LR +G +P +IY K I S + K L N+ L + Sbjct: 10 EKIKKKSNRELRNSGYVPCVIY---RKKKNITFSVLISTLKKNLLKMNYYKIYLKIKNYY 66 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 ++ I K+ Q P+++ +IH DF ++ + + T+ +P+ I+E S G+ +GG+ + Sbjct: 67 KM-EAILKEIQFHPITENVIHVDFYELKKKNKYTISIPL--ISEGHSIGVSKGGEYKLFL 123 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ L I +++++L+IG++ +++ I P+ Sbjct: 124 KKIKLKILKYFFLKKIFLNISNLEIGNNFYLKKIYNPK 161 >gi|145299053|ref|YP_001141894.1| 50S ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223659|sp|A4SMM4|RL25_AERS4 RecName: Full=50S ribosomal protein L25 gi|142851825|gb|ABO90146.1| ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] Length = 95 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 48/91 (52%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R +GKG++R LR Q+PAIIYG + + I + K F ++LTL Sbjct: 5 FQAEVRSDLGKGASRRLRHADQVPAIIYGAGKEAQSITVDHKKFIIAQEKPEFYESVLTL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I E V+V K Q PV L+H DF++V Sbjct: 65 VINGEEVNVKVKAIQRHPVKPKLVHLDFVRV 95 >gi|262275816|ref|ZP_06053625.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] gi|262219624|gb|EEY70940.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] Length = 92 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R K GKG++R LR + PA++YG + P IAL + ++ F I T Sbjct: 2 KFEAVVRTKQGKGASRRLRHADKFPAVVYGGEAAPVAIALDHSKVITQMDKPEFYEAI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q P ++H DF+++ Sbjct: 61 LVIDGAEVKVKPQDIQRHPFKPKVMHMDFIRI 92 >gi|120598921|ref|YP_963495.1| 50S ribosomal protein L25 [Shewanella sp. W3-18-1] gi|146292993|ref|YP_001183417.1| 50S ribosomal protein L25 [Shewanella putrefaciens CN-32] gi|166223721|sp|A4Y6N5|RL25_SHEPC RecName: Full=50S ribosomal protein L25 gi|166223723|sp|A1RJU6|RL25_SHESW RecName: Full=50S ribosomal protein L25 gi|120559014|gb|ABM24941.1| LSU ribosomal protein L25P [Shewanella sp. W3-18-1] gi|145564683|gb|ABP75618.1| LSU ribosomal protein L25P [Shewanella putrefaciens CN-32] gi|319426477|gb|ADV54551.1| Ribosomal protein L25-like protein [Shewanella putrefaciens 200] Length = 95 Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T+++T+ Sbjct: 5 IQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFEHKDIINIQANEDFYTSVVTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V V + Q I+ H DF+ Sbjct: 65 VLDGKEVGVRAQAMQRHVFKPIIEHVDFV 93 >gi|118443386|ref|YP_877848.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium novyi NT] gi|118133842|gb|ABK60886.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 197 Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 9/182 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + ++++ + KN + L Sbjct: 4 LKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVL-KNGEYGGIDL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN---KSPGIKQG 124 I I K+ Q DPV+ ++H D ++ + + +P+ F+ E K I Q Sbjct: 63 QINNNHHKAIVKEIQKDPVTKKILHIDLQEIDKNEVIQTEIPINFVGEEFIAKRGEIVQK 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 K N + + ++IP SI VD++ + GD + D+ + + + ++ +A + Sbjct: 123 EKSN-----IKVQGKYDDIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMDTILAVV 177 Query: 185 VA 186 + Sbjct: 178 MG 179 >gi|295398795|ref|ZP_06808798.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] gi|294972963|gb|EFG48787.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] Length = 211 Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +A RD G +A+ LRK +P ++Y + DP I+LS D+ +++ + + ++ Sbjct: 2 KFTAQKRDGAGTSAAKQLRKEDLVPGVVYASDLDPINISLSVSDV-EQIRRELGLNSVFD 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + V ++ + + + + +G + + + + +NE+ + G Sbjct: 61 LELDGKTHTVYVREISQSALKPTIYNISLQAIKKGQKLEMPLSIVIVNEDALA--DKEGV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + E++++ PDS+ VD+ L IGDS+ D++L ++ + I A Sbjct: 119 ASTTTLEINVVADPATAPDSVEVDVTGLAIGDSVTAGDLKLASDIELVTDAEEVVVAISA 178 Query: 187 PI 188 P+ Sbjct: 179 PV 180 >gi|68053216|sp|Q8EF74|RL25_SHEON RecName: Full=50S ribosomal protein L25 Length = 95 Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T+++T+ Sbjct: 5 ITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSVVTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V V + Q I+ H DF+ Sbjct: 65 VLDGKEVGVRAQAMQRHAFKPIIEHVDFV 93 >gi|260772946|ref|ZP_05881862.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] gi|260612085|gb|EEX37288.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] Length = 92 Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV+R ++GKG++R LR G PAI+YG + P IAL D+ ++ F I T Sbjct: 2 KFNAVVRTELGKGASRRLRHTGLFPAIVYGGEAAPVSIALKHDDVINQMDKPEFYEAI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGTEVKVKPQDVQRHVFKPKVEHMDFIRI 92 >gi|254458793|ref|ZP_05072217.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] gi|207084559|gb|EDZ61847.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] Length = 178 Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R K S + LR++G + A IYG + A + + + K + +++ Sbjct: 2 LEGIIRKSTDKQSTKTLRRDGYLIANIYGKGLENINAAFKMNEYIRTVRKKETLAFPVSI 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + GKE+ +++ + Y+ PV+ L+H D + G T +VPV + E + G+K G + Sbjct: 62 E-GKEM-NLVVQSYEAQPVTGTLLHVDLMVAQPGVVTTYNVPVVPVGE--AFGLKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + +++ N+P++ +D+ + GDS + D+ Sbjct: 118 HKAKPRLTVKGAIENVPNTFEIDVTKMDTGDSKLIRDL 155 >gi|117619381|ref|YP_856743.1| ribosomal L25p family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560788|gb|ABK37736.1| ribosomal L25p family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 122 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 48/91 (52%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R +GKG++R LR Q+PAI+YG + + I + K F ++LTL Sbjct: 32 FQAEVRSDLGKGASRRLRHADQVPAIVYGAGKEAQSITVDHKKFILAQEKPEFYESVLTL 91 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I E V+V K Q PV L+H DF++V Sbjct: 92 VINGEEVNVKVKAIQRHPVRYKLVHLDFVRV 122 >gi|253681485|ref|ZP_04862282.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253561197|gb|EES90649.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 196 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 3/179 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P I+YG + +++K + K+ + L Sbjct: 4 LKAEERVKDSVHSARRERKKGMVPGILYGAGIQNLLFEIGELELNKEIL-KHGEHGGVNL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + I K+ Q DPV+ +IH D +V+ V +P+ F E K+G + Sbjct: 63 EINNKQHQAIVKEVQKDPVTKKIIHVDLQEVNNEEIVQTEIPIVFTGEELIS--KRGDTI 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP I +DL+ + GD + D+ + + + ++ +A I+ Sbjct: 121 QKEKSNIRVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMANEIICLDDMDTILAVIMG 179 >gi|170758871|ref|YP_001788537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169405860|gb|ACA54271.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 189 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A++R+K GK RK G P IIYG M + + + K L +K + + L Sbjct: 6 LTAIVREKSGKKC----RKEGFAPGIIYGAEMKESMKVKFEVPSLLKYL-NKAGINSRLW 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+IG + +V+ K+ Q +P + +++ D VS + +PV+F E K +G Sbjct: 61 LNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKGFL 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I V++ + + GD+I + DI+L E Sbjct: 119 LEEFTPYIEVAGKVGILPEIIVVNVGENEPGDNIKVSDIKLDE 161 >gi|320095754|ref|ZP_08027401.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977310|gb|EFW09006.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] Length = 197 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 11/163 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG++R R+ +IPA++YG+ +DP I + D+ + L + Sbjct: 7 LIAETRTEFGKGASRRARRAAKIPAVLYGHGADPVHIDVPGHDLFLIVRGTKNALVELKV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D +L V K+ Q+ PVS L+HADFL V G V V VPV E+ +PG Sbjct: 67 DGKSQLALV--KEVQVHPVSRNLLHADFLAVKAGEKVDVEVPVVVDGES-APGTAH---- 119 Query: 128 NVVCHEVSLL--CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 E ++L A IP+ + V + L+ G ++ + D+ LP Sbjct: 120 --TIEEFTILVKASATAIPEDLKVSIEGLEAGSAVRVADLVLP 160 >gi|308176602|ref|YP_003916008.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] gi|307744065|emb|CBT75037.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] Length = 94 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 11/86 (12%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV+R GKG+AR R++GQIPA++YG S+P+ + L A++ TT+ Sbjct: 6 LDAVVRSDFGKGAARQARRDGQIPAVVYGAGSEPQHVLLPARE-----------TTLAVR 54 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHA 93 D G ELV I + DI IHA Sbjct: 55 DRGVELVLNIEGKTVKTTIKDIQIHA 80 >gi|24373672|ref|NP_717715.1| ribosomal protein L25 [Shewanella oneidensis MR-1] gi|24348022|gb|AAN55159.1|AE015652_8 ribosomal protein L25 [Shewanella oneidensis MR-1] Length = 148 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T+++T+ Sbjct: 58 ITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSVVTI 117 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V V + Q I+ H DF+ Sbjct: 118 VLDGKEVGVRAQAMQRHAFKPIIEHVDFV 146 >gi|261253125|ref|ZP_05945698.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] gi|260936516|gb|EEX92505.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] Length = 92 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG + P I L+ ++ ++ F I T Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAPVAIVLTHDEVMNQMDKPEFYEAI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|82523964|emb|CAI78775.1| ribosomal protein L25 [uncultured epsilon proteobacterium] Length = 192 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 4/158 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K LR++G + A IYG A + + + +K ++ +++ Sbjct: 16 LQGIIRESISKSGTNALRRDGYLIANIYGKGIANINAAFKENEYIRTVRNKETLSFPVSV 75 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + G E+ +V+ + Y+ V+ L+H D + G H+PV + + G+K G + Sbjct: 76 N-GSEM-NVVVQSYESHAVTGRLLHVDLMIAQPGVVTHYHIPV--TTKGIALGLKNKGLV 131 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 N+ + + N+P+SI VD+ + +GDS + D+ Sbjct: 132 NISKSRLRVKAAIENVPNSIVVDVTPMDVGDSRLIRDL 169 >gi|145295097|ref|YP_001137918.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum R] gi|166223676|sp|A4QCR9|RL25_CORGB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|140845017|dbj|BAF54016.1| hypothetical protein [Corynebacterium glutamicum R] Length = 202 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 5/184 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K + A +R + GKGSAR R GQIPA++YG + L + + Sbjct: 3 KYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTVDHRTFAALVRQEGVNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L LDI + + K + ++ + H D L + G V V VPV + +PG Sbjct: 63 VLELDIEGQKHLTMIKHIDQNVLTFNIDHLDLLAIKRGEKVEVDVPV-IVEGEPAPGTMW 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + + E +L +IP+ V + L+ G + DI L T+ + I Sbjct: 122 VQDADTIKVEADVL----SIPEEFKVSIEGLEFGAQVTAADIELDGDTTLVEDPETLIVN 177 Query: 184 IVAP 187 IV P Sbjct: 178 IVYP 181 >gi|28897984|ref|NP_797589.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91229004|ref|ZP_01262870.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|153840101|ref|ZP_01992768.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|260364231|ref|ZP_05776934.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] gi|260877139|ref|ZP_05889494.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|260895799|ref|ZP_05904295.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|260902064|ref|ZP_05910459.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|269968142|ref|ZP_06182177.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|68053212|sp|Q87QD9|RL25_VIBPA RecName: Full=50S ribosomal protein L25 gi|28806198|dbj|BAC59473.1| ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91187468|gb|EAS73806.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|149746297|gb|EDM57367.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|269827273|gb|EEZ81572.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|308088343|gb|EFO38038.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|308093641|gb|EFO43336.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|308109083|gb|EFO46623.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|308111903|gb|EFO49443.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] Length = 92 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKE V V P+D Q + H DF+++ Sbjct: 62 VIDGKE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|312885156|ref|ZP_07744836.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367169|gb|EFP94741.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] Length = 92 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDIVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKEL V P+D Q + H DF+++ Sbjct: 62 VIDGKEL-KVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|90578772|ref|ZP_01234582.1| 50S ribosomal protein L25 [Vibrio angustum S14] gi|90439605|gb|EAS64786.1| 50S ribosomal protein L25 [Vibrio angustum S14] Length = 92 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV+R +GKG++R LR Q P I+YG + P IAL D+ ++ F + Sbjct: 2 KFNAVVRTDLGKGASRRLRLQEQFPGIVYGGEAAPVAIALKHSDVINQMDKPEFYEGFVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q P + H DF ++ Sbjct: 62 VIDGQE-VKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|284007246|emb|CBA72542.1| 50S ribosomal protein L25 [Arsenophonus nasoniae] Length = 93 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LRKN ++PAI+YG +P I L+ ++ + SK +LTL Sbjct: 4 INAEIRKEQGKGASRRLRKNNKLPAIVYGGDQEPVSIELNHDEVINQ-ESKPEFYEVLTL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +G + V + Q P L H DFL+V Sbjct: 63 VVGGKKTKVKVQAVQRHPFKPKLTHIDFLRV 93 >gi|319441660|ref|ZP_07990816.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium variabile DSM 44702] Length = 216 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++A R + GKG+AR LR+ ++PA++Y N +P ++ + L + Sbjct: 1 MATKIIDIAAQPRTEFGKGAARRLRRAWRVPAVVYANHQEPVHVSFDLLEFQGILRNHG- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ +D+ E + K + ++ + HAD L V TV V VPV + +PG Sbjct: 60 VNALVDVDVDGEKHLALIKSVDQNVLTFDIDHADLLAVKRDETVEVDVPV-IVEGEPTPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + V E ++L +IP+ +TV L +IGD I DI LP + S Sbjct: 119 TEYIQDADTVTVEANVL----SIPEELTVSLEGKEIGDQILAGDITLPAGVTLTSDAETL 174 Query: 181 IATIVAP 187 + AP Sbjct: 175 VVNFTAP 181 >gi|89073632|ref|ZP_01160154.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] gi|89050659|gb|EAR56145.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] Length = 92 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV+R +GKG++R LR Q P IIYG + P IAL D+ ++ F + Sbjct: 2 KFNAVVRTDLGKGASRRLRLAEQFPGIIYGGEAAPVAIALKHSDVINQMDKPEFYEGFVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q P + H DF ++ Sbjct: 62 VIDGQE-VKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|158319103|ref|YP_001511610.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139302|gb|ABW17614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 197 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 78/162 (48%), Gaps = 3/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +RD GK R++G +P ++Y K + + +++ K + S+ + + L Sbjct: 6 LNIELRDFKGKNQMLKTRRSGNVPGVVYSRGEKTKKVLFNEREMEK-ILSRYGQSMKIAL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G E I K+ Q + + ++H DF + E V + +P++ I+ + + ++ Sbjct: 65 NLGGERFFAIIKEIQKGSIHNEILHIDFQTLDENEKVKIQMPIQIIHREEVESSVRLMQM 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 N+ +EV + +PD + +D L D + + D+ + E Sbjct: 125 NM--NEVEIQTYPRYLPDKVELDATKLNEKDVLTIADLDIAE 164 >gi|119774751|ref|YP_927491.1| 50S ribosomal protein L25 [Shewanella amazonensis SB2B] gi|166223717|sp|A1S615|RL25_SHEAM RecName: Full=50S ribosomal protein L25 gi|119767251|gb|ABL99821.1| LSU ribosomal protein L25P [Shewanella amazonensis SB2B] Length = 95 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 51/89 (57%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R ++GKGS+R LR+ G++PA+IYG +P I KDI + +F T++LT+ Sbjct: 5 IPAQTRTEIGKGSSRRLRREGKVPAVIYGVGKEPVSIVFDHKDIINIQANDDFYTSVLTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V+V + Q ++ H DF+ Sbjct: 65 VLDGKEVNVRAQAMQRHVFKPMIDHVDFV 93 >gi|297183229|gb|ADI19369.1| ribosomal protein l25 (general stress protein ctc) [uncultured Chloroflexi bacterium HF0500_03M05] Length = 219 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 14/193 (7%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD KLS R+ GK RL R+ G +P +G + + + + A+ + +RL Sbjct: 1 MDTLNLKLSP--REVKGKKVKRL-RQAGVVPVHFFGGDIESQALQVEAR-VLRRLVKSAG 56 Query: 61 MTTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 +T+++ G+ + + ++ Q PV++ L+H DFL+V TVT +VP+ I + Sbjct: 57 TNIPITVEVEGQDGENICFI--REVQRHPVTEDLLHVDFLRVDVSQTVTANVPI--ILDG 112 Query: 117 KSPGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSM 174 +P ++ GG L + + NIP +I VD++DL SI + D+++ + + Sbjct: 113 SAPAVENSGGTLIQPLQTLVVESLPMNIPAAIHVDVSDLDDFEKSIRVRDVQVSSGVTLL 172 Query: 175 SQLNITIATIVAP 187 + L I ++ P Sbjct: 173 ADLGEMITRVLPP 185 >gi|255527375|ref|ZP_05394251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296185632|ref|ZP_06854041.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255508947|gb|EET85311.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296049760|gb|EFG89185.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 195 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 8/178 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R K + R+ G IPA+IYG+ ++ +P+ + K + +K+ L Sbjct: 6 LNAEKRTK----ETKKFREEGFIPAVIYGDCVAKSEPVKFEKMPLMK-ILAKHGSNVKLW 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + G + K+ Q PVS+ +IH D VS+ V V VP+ F E K + Sbjct: 61 IKRGDDKKFGFIKEIQRHPVSNKIIHLDVQLVSKDHEVKVQVPITFNGEEALA--KNQLQ 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + EV +L + IP+ I ++++ GDSI ++D+ L ++ + N ATI Sbjct: 119 LQIQKPEVDVLGKIDLIPEVIHINVSGKNAGDSITLKDLNLDKQLKIHDKENEIYATI 176 >gi|224533422|ref|ZP_03674015.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] gi|224513384|gb|EEF83742.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] Length = 136 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Query: 56 YSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 ++K T+L LD GK V KD + S ++ H DF +V + +VP++ I Sbjct: 8 FAKFTDNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG- 66 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 S G+K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 67 -ASIGVKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 118 >gi|328473060|gb|EGF43908.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus 10329] Length = 92 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIILNHDDIVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKE V V P+D Q + H DF+++ Sbjct: 62 VIDGKE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|323702322|ref|ZP_08113988.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323532812|gb|EGB22685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 188 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%) Query: 25 RKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 R+ G P +IYG M++ I + R+ + + + IG+ + I K+ Q Sbjct: 19 RRKGFAPGVIYGEGMAEGLCIKFEMNKLL-RVLKNHREGAKVQVKIGEHIKQCIVKEVQR 77 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 D ++ ++H D V++ TV V +PV F +N+ K L V EV + N + Sbjct: 78 DSITGKVLHIDLQTVTDNDTVRVKIPVLFKGKNRLEEKKL--LLQVFLPEVEVAGKVNLL 135 Query: 144 PDSITVDLNDLKIGDSIHMEDI 165 P+ ITVD+ + ++GD I + D+ Sbjct: 136 PEFITVDVENKELGDKITVRDL 157 >gi|113970172|ref|YP_733965.1| 50S ribosomal protein L25 [Shewanella sp. MR-4] gi|114047638|ref|YP_738188.1| 50S ribosomal protein L25 [Shewanella sp. MR-7] gi|117920337|ref|YP_869529.1| 50S ribosomal protein L25 [Shewanella sp. ANA-3] gi|123130433|sp|Q0HJ59|RL25_SHESM RecName: Full=50S ribosomal protein L25 gi|123326513|sp|Q0HUS4|RL25_SHESR RecName: Full=50S ribosomal protein L25 gi|166223722|sp|A0KWF4|RL25_SHESA RecName: Full=50S ribosomal protein L25 gi|113884856|gb|ABI38908.1| LSU ribosomal protein L25P [Shewanella sp. MR-4] gi|113889080|gb|ABI43131.1| LSU ribosomal protein L25P [Shewanella sp. MR-7] gi|117612669|gb|ABK48123.1| LSU ribosomal protein L25P [Shewanella sp. ANA-3] Length = 95 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 50/89 (56%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T+++T+ Sbjct: 5 IQAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINIQTNEDFYTSVVTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V V + Q ++ H DF+ Sbjct: 65 VLDGKEVGVRAQAMQRHAFKPMIEHVDFV 93 >gi|150387890|ref|YP_001317939.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947752|gb|ABR46280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 200 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 3/165 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R++ G G A R+ G++PA++Y +P+ L+ K++ K L + I Sbjct: 6 LKYTIREEAGTGGASKARRAGEVPAVLYSKGEVTQPVYLNTKELEKILSIYGGSSRIALD 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 GK+ +I K+ Q + + + L+H D ++ E + + +P+ +N+ + + + Sbjct: 66 HEGKKCFAII-KEIQKNMLKNSLLHVDLQKLDENQKIRMTIPIYILNKEAVETLAE--IV 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + EV + ++P+ I VD + LK ++ M+D+ + T+ Sbjct: 123 QIQQDEVEIQAYPRDLPEKIEVDASLLKDQANLTMKDLNIVGNTA 167 >gi|86148084|ref|ZP_01066385.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218709848|ref|YP_002417469.1| 50S ribosomal protein L25 [Vibrio splendidus LGP32] gi|254801067|sp|B7VPU4|RL25_VIBSL RecName: Full=50S ribosomal protein L25 gi|85834144|gb|EAQ52301.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218322867|emb|CAV19044.1| ribosomal protein L25 [Vibrio splendidus LGP32] Length = 92 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA+IYG + I L D+ ++ F TI T Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVAIELVHADVINQMDKPEFYETI-T 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|309789906|ref|ZP_07684483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] gi|308228038|gb|EFO81689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] Length = 199 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 10/149 (6%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH-VIPKD 80 + LR +G IP IYG + +SA++ ++ K TT++ L+IG + V V +D Sbjct: 7 KYLRSSGIIPCTIYGKGFEAVSAQVSAREFD-LVFRKAGRTTLIDLNIGSQGVSAVFVQD 65 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL--- 137 Q PVS ++H DF V V V VPV + E SP + +G L + H +S++ Sbjct: 66 IQRHPVSRAILHIDFKVVDLKKLVHVEVPVIAVGE--SPLVARGDAL--LNHPLSMVMVE 121 Query: 138 CPANNIPDSITVDLNDLKIGD-SIHMEDI 165 N++P I +D+ L D +IH+ D+ Sbjct: 122 ALPNDLPQHIEIDVTCLDAMDKAIHVRDL 150 >gi|126174127|ref|YP_001050276.1| 50S ribosomal protein L25 [Shewanella baltica OS155] gi|153000452|ref|YP_001366133.1| 50S ribosomal protein L25 [Shewanella baltica OS185] gi|160875049|ref|YP_001554365.1| 50S ribosomal protein L25 [Shewanella baltica OS195] gi|217973559|ref|YP_002358310.1| 50S ribosomal protein L25 [Shewanella baltica OS223] gi|304411331|ref|ZP_07392945.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|307305347|ref|ZP_07585095.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|166223718|sp|A3D3U4|RL25_SHEB5 RecName: Full=50S ribosomal protein L25 gi|166223719|sp|A6WMN1|RL25_SHEB8 RecName: Full=50S ribosomal protein L25 gi|189042370|sp|A9KZ17|RL25_SHEB9 RecName: Full=50S ribosomal protein L25 gi|254801061|sp|B8E7C8|RL25_SHEB2 RecName: Full=50S ribosomal protein L25 gi|125997332|gb|ABN61407.1| LSU ribosomal protein L25P [Shewanella baltica OS155] gi|151365070|gb|ABS08070.1| ribosomal protein L25 [Shewanella baltica OS185] gi|160860571|gb|ABX49105.1| ribosomal protein L25 [Shewanella baltica OS195] gi|217498694|gb|ACK46887.1| ribosomal protein L25 [Shewanella baltica OS223] gi|304350186|gb|EFM14590.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|306911650|gb|EFN42075.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|315267281|gb|ADT94134.1| Ribosomal protein L25-like protein [Shewanella baltica OS678] Length = 95 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 48/89 (53%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T+ LT+ Sbjct: 5 IQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFDHKDIINIQANADFYTSTLTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + V V + Q ++ H DF+ Sbjct: 65 VVDGKEVGVRAQAMQRHVFKPLIEHVDFV 93 >gi|315604958|ref|ZP_07880014.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313353|gb|EFU61414.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 197 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 7/161 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ ++P ++YG+ ++P+ + + D+ L + ++ L Sbjct: 7 LLAEERTEFGKGAARRARRAAKVPTVLYGHGAEPRHLDVPEHDLF--LIVRGTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV E PG Sbjct: 65 KIAGKTQLALVKDVQVHPVRRNILHADFLAVKAGEKVDVEVPVVVTGE-PVPGTVH---- 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 ++ +++ PA IP+S+ V + ++ G ++ + D+ LP Sbjct: 120 SLEEFTIAVKAPATAIPESLEVSIEGIEAGSAVRVADLALP 160 >gi|269102758|ref|ZP_06155455.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] gi|268162656|gb|EEZ41152.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] Length = 92 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F I Sbjct: 2 KFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEAPVAIVLDHDSVINQMDKPAFYEVITL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKE V V P+D Q P + H DF +V Sbjct: 62 VIDGKE-VQVKPQDIQRHPYKPKVNHMDFNRV 92 >gi|262394558|ref|YP_003286412.1| 50S ribosomal protein L25p [Vibrio sp. Ex25] gi|262338152|gb|ACY51947.1| LSU ribosomal protein L25p [Vibrio sp. Ex25] Length = 92 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F ++ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGLVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKE V V P+D Q + H DF+++ Sbjct: 62 VIDGKE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|167856183|ref|ZP_02478921.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] gi|167852705|gb|EDS23981.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] Length = 95 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 46/92 (50%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQVHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF ++ Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|219870871|ref|YP_002475246.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] gi|254801050|sp|B8F4P6|RL25_HAEPS RecName: Full=50S ribosomal protein L25 gi|219691075|gb|ACL32298.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] Length = 95 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 46/92 (50%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F +LT Sbjct: 4 KFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQAHDAFYNEVLT 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L+H DF ++ Sbjct: 64 IVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|168211678|ref|ZP_02637303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] gi|170710354|gb|EDT22536.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] Length = 202 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 9/180 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+K + S+R R+ G +P +IYG + + +++ L S +L++ Sbjct: 4 LQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLSI 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE---NKSPGIKQG 124 + + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E NK + Q Sbjct: 63 NSQESSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYINKLDAVLQK 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 123 N-----LDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASV 177 >gi|197335111|ref|YP_002155624.1| ribosomal L25p family protein [Vibrio fischeri MJ11] gi|226694584|sp|B5FCG1|RL25_VIBFM RecName: Full=50S ribosomal protein L25 gi|197316601|gb|ACH66048.1| ribosomal L25p family protein [Vibrio fischeri MJ11] Length = 92 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R + GKG++R LR GQ PAI+YG P IAL + ++ F I Sbjct: 2 KFEAVVRTEQGKGASRRLRHAGQFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEAI-E 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I +V V P+D Q + H DF+++ Sbjct: 61 LVIDGAVVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|331269172|ref|YP_004395664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329125722|gb|AEB75667.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 224 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 3/179 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + +++K + I + Sbjct: 27 LKAEERIKNSVHSARRERKKGMVPGVLYGAGMQNLLFEVGELELNKEILKHGEHGGI-NV 85 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI I K+ Q DPV+ +IH D +V+ V +P+ F + K+G + Sbjct: 86 DINNRKHQAIVKEVQKDPVTKKIIHVDLQEVNNEEVVQTEIPIVF--KGGELISKRGDTI 143 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP I +DL+ + GD + D+ + + + + ++ +A ++ Sbjct: 144 QKEKSNIKVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMSSEITCLDDMDTILAVVMG 202 >gi|187776863|ref|ZP_02993336.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] gi|187775522|gb|EDU39324.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] Length = 189 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++A++R+K GK RK G P IIYG M + + + + L +K + + L Sbjct: 6 MTAIIREKSGKKC----RKEGFAPGIIYGAEMKEAIKVKFEVPSLLRYL-NKAGINSRLW 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+IG + +V+ K+ Q +P + +++ D VS + +PV+F E K +G Sbjct: 61 LNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKGFL 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I V++ + + GD+I + DI+L E Sbjct: 119 LEEFTPYIEVAGKVGILPEIIVVNVGENQPGDNIKVSDIKLDE 161 >gi|68053088|sp|Q659V3|RL25_PASPI RecName: Full=50S ribosomal protein L25 gi|52137558|emb|CAH33824.1| L25 protein [Photobacterium damselae subsp. piscicida] Length = 92 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F I Sbjct: 2 KFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEVPVAIVLDHDSVINQMDKPAFYEVITL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + GKE V V P+D Q P + H DF +V Sbjct: 62 VIDGKE-VQVKPQDIQRHPYKPKVNHMDFKRV 92 >gi|110800820|ref|YP_696556.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens ATCC 13124] gi|123049713|sp|Q0TP84|RL25_CLOP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110675467|gb|ABG84454.1| 50S ribosomal protein L25 [Clostridium perfringens ATCC 13124] Length = 202 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 85/181 (46%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+K + S+R R+ G +P +IYG + + +++ L S +L++ Sbjct: 4 LQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLSI 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E + KL Sbjct: 63 NSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGE------EYINKL 116 Query: 128 NVVCHE----VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + V + + + C +NIP + +++ K GD + D+ + + + LN +A+ Sbjct: 117 DAVLQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVAS 176 Query: 184 I 184 + Sbjct: 177 V 177 >gi|148381166|ref|YP_001255707.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153932176|ref|YP_001385541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153937600|ref|YP_001388947.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|168179133|ref|ZP_02613797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|168183534|ref|ZP_02618198.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226950645|ref|YP_002805736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|237796673|ref|YP_002864225.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] gi|148290650|emb|CAL84779.1| putative ribosomal L25p family protein [Clostridium botulinum A str. ATCC 3502] gi|152928220|gb|ABS33720.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152933514|gb|ABS39013.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] gi|182670001|gb|EDT81977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|182673333|gb|EDT85294.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226844221|gb|ACO86887.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|229260688|gb|ACQ51721.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 189 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A++R+K GK RK G P IIYG M + + + + L +K + + Sbjct: 4 ASLTAIVREKSGKKC----RKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGINSR 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F E K +G Sbjct: 59 LWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKG 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I V + + + GD+I + DI+L E Sbjct: 117 FLLEEFTPYIEVAGKVGILPEIIVVSVGENEPGDNIKVSDIKLDE 161 >gi|91792860|ref|YP_562511.1| ribosomal protein L25 [Shewanella denitrificans OS217] gi|123166239|sp|Q12P38|RL25_SHEDO RecName: Full=50S ribosomal protein L25 gi|91714862|gb|ABE54788.1| LSU ribosomal protein L25P [Shewanella denitrificans OS217] Length = 95 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 50/91 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F T+ +TL Sbjct: 5 IQAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEPMVIVFDQKDIINIQANADFYTSDVTL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + V V K Q ++ HADF+ V Sbjct: 65 VVDGKDVKVRAKAMQRHAFKPLIEHADFMFV 95 >gi|18310856|ref|NP_562790.1| general stress protein [Clostridium perfringens str. 13] gi|170764102|ref|ZP_02632078.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170764291|ref|ZP_02640532.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|182420441|ref|ZP_02641127.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] gi|182626124|ref|ZP_02953884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|71153135|sp|Q8XJ87|RL25_CLOPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|18145538|dbj|BAB81580.1| probable general stress protein [Clostridium perfringens str. 13] gi|170662463|gb|EDT15146.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170713646|gb|EDT25828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|177908561|gb|EDT71086.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|182382196|gb|EDT79675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] Length = 203 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 85/181 (46%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+K + S+R R+ G +P +IYG + + +++ L S +L++ Sbjct: 5 LQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLSI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E + KL Sbjct: 64 NSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGE------EYINKL 117 Query: 128 NVVCHE----VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + V + + + C +NIP + +++ K GD + D+ + + + LN +A+ Sbjct: 118 DAVLQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVAS 177 Query: 184 I 184 + Sbjct: 178 V 178 >gi|255318851|ref|ZP_05360077.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262378891|ref|ZP_06072048.1| ribosomal L25p [Acinetobacter radioresistens SH164] gi|255304107|gb|EET83298.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262300176|gb|EEY88088.1| ribosomal L25p [Acinetobacter radioresistens SH164] Length = 98 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 44/82 (53%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL 73 D GKG++R LR Q+PAIIYG ++P I L + + K L + F ++ + +G + Sbjct: 14 DVQGKGASRRLRHAAQLPAIIYGGDAEPVAITLELRQLVKALENNAFFEEVIEIVVGDKT 73 Query: 74 VHVIPKDYQLDPVSDILIHADF 95 V + Q P + +HADF Sbjct: 74 ESVKIQALQRHPAKNTPMHADF 95 >gi|94502332|ref|ZP_01308804.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833659|ref|YP_001597855.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] gi|94451109|gb|EAT14062.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206148|gb|ABS30458.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] Length = 188 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 9/169 (5%) Query: 18 KGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL-VH 75 K + R LR G IP I+YG N + I LS + K +Y+ F + L+I E + Sbjct: 16 KINNRELRNYGYIPCIVYGINKNIKFYILLSI--LKKVIYT--FKVYKVILEIKNEYKIE 71 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 + K+ Q +P++D +IH DF ++ + + + VP+ + S G+ +GG+ + +++ Sbjct: 72 ALLKEIQFNPINDDVIHVDFYELKKNKYIIISVPIISVGH--SLGVSKGGEYKIFIKKIN 129 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L I D + +D+++L IGD++ +++I P K + N IA++ Sbjct: 130 LKVIPEFILDHMDIDISNLDIGDNLSIKNIYNP-KYIILHNCNDVIASV 177 >gi|160937289|ref|ZP_02084651.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] gi|158439853|gb|EDP17602.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] Length = 188 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 9/174 (5%) Query: 17 GKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 G A+ LR+ G IPA ++G ++ DP I L D ++RL + + L LD+ + Sbjct: 11 GAIKAKKLRRLGFIPANVFGKSLPDPISIQLKESD-ARRLLHQKREGSKLMLDLEGTGLP 69 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V K+ ++D + + H F ++ V + + +N++K PG +L+ + E+ Sbjct: 70 VQIKEKEIDTIKGQIQHISFQALTADEKVNSVIHILLVNDDKIPG-----QLDKMLMEIP 124 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 ++ D+ITVDL+ + +G + ++DI PE S +L + IV +S Sbjct: 125 YASLPGDMIDTITVDLDGITVGTILTVKDI--PELMSDKIELKVDSEEIVLRVS 176 >gi|269963438|ref|ZP_06177765.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] gi|269831838|gb|EEZ85970.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] Length = 92 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG + I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAAVAIVLNHDDIVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|330446122|ref|ZP_08309774.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490313|dbj|GAA04271.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 92 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV+R +GKG++R LR G P I+YG + P I L D+ ++ F + Sbjct: 2 KFNAVVRTDLGKGASRRLRLEGLFPGIVYGGEAAPVAITLKHSDVINQMDKPEFYEGFVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q P + H DF ++ Sbjct: 62 VIDGQE-VKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|326803940|ref|YP_004321758.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] gi|326650944|gb|AEA01127.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] Length = 210 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 6/163 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-TIL 65 K A RD G +++ LR+ +P ++Y + DP I++ D+ K ++ T ++ Sbjct: 3 KFVAKTRDAAGTSASKALRREDLVPGVVYASDLDPIKISMERPDVEK--IERDLGTNSVF 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+I G+ V ++ + I+ + + +G + V+VPV + E K Sbjct: 61 ELEIEGQGSRTVFLREISRAAIKPIVYNISLQAIKKGEKLEVNVPVSIVGEEKLANPAGV 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 +NV +EV+L P+ TVD++ L I DS+ +++ Sbjct: 121 AAINV--YEVTLRIDPAKAPEYFTVDVSGLDINDSVTAGEVKF 161 >gi|156974943|ref|YP_001445850.1| 50S ribosomal protein L25 [Vibrio harveyi ATCC BAA-1116] gi|166223731|sp|A7MZG9|RL25_VIBHB RecName: Full=50S ribosomal protein L25 gi|156526537|gb|ABU71623.1| hypothetical protein VIBHAR_02662 [Vibrio harveyi ATCC BAA-1116] Length = 92 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|170726508|ref|YP_001760534.1| 50S ribosomal protein L25 [Shewanella woodyi ATCC 51908] gi|226736368|sp|B1KDP2|RL25_SHEWM RecName: Full=50S ribosomal protein L25 gi|169811855|gb|ACA86439.1| ribosomal protein L25 [Shewanella woodyi ATCC 51908] Length = 95 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 49/88 (55%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI +++F T+ LT+ Sbjct: 5 IAAQVRTEIGKGSSRRLRHADKVPAVIYGPGKEPVAIVFDHKDIINIQENEDFYTSTLTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 ++ V V K Q ++ H DF Sbjct: 65 NLDGSDVKVSVKAMQRHAFKPLIEHVDF 92 >gi|322807531|emb|CBZ05106.1| LSU ribosomal protein L25p [Clostridium botulinum H04402 065] Length = 189 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 8/165 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A++R+K GK RK G P IIYG M + + + + L +K + + Sbjct: 4 ASLTAIVREKSGKKC----RKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGINSR 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F E K +G Sbjct: 59 LWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKG 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I + + + + GD+I + DI+L E Sbjct: 117 FLLEEFTPYIEVAGKVGILPEIIVISVGENEPGDNIKVSDIKLDE 161 >gi|160879949|ref|YP_001558917.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] gi|189042350|sp|A9KSE6|RL25_CLOPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160428615|gb|ABX42178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] Length = 193 Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNF 60 Q+ L+ V R KG+ +LLR NG +P I+G + IA+ + K + Y +N Sbjct: 2 QETALLNMVPRTSTSKGANKLLRNNGYLPGNIFGKGMESISIAVKKDEFKKSIKEYGRNA 61 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +D + V+ K+ + P+ + + H +F VS + V + I Sbjct: 62 VFKL--VDTNNKEYTVMTKEITVAPLINEISHLNFQLVSLSEAIKQEVAFKIIGTE---- 115 Query: 121 IKQGGKLNVVCH--EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 + +L + H V + ++IP + +D++ + GDS+ +DI+LPE +S Sbjct: 116 FLESKRLLLNSHVDSVPVSGLPHDIPHELEIDVSSMNSGDSLLFKDIKLPEGITS 170 >gi|169343699|ref|ZP_02864698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] gi|169298259|gb|EDS80349.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] Length = 203 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 9/180 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+K + S+R R+ G +P +IYG + + +++ L S +L++ Sbjct: 5 LQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHVL-SVTGEHGLLSI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE---NKSPGIKQG 124 + + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E NK + Q Sbjct: 64 NSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYINKLDAVLQK 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 124 N-----LDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASV 178 >gi|262376651|ref|ZP_06069879.1| ribosomal L25p [Acinetobacter lwoffii SH145] gi|262308361|gb|EEY89496.1| ribosomal L25p [Acinetobacter lwoffii SH145] Length = 101 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 8 LSAVMRDKV--GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R++ GKG++R LR ++PAIIYG + P I + + + K L + +F ++ Sbjct: 9 LNAAAREEAVQGKGASRRLRLQAKVPAIIYGGEAAPVAITVELRQLVKFLENNSFFEEVI 68 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +D+ ++ V + Q P + +HADF Sbjct: 69 EIDVDGKVESVKIQALQRHPAKNTPMHADF 98 >gi|310657484|ref|YP_003935205.1| 50S ribosomal protein L25 [Clostridium sticklandii DSM 519] gi|308824262|emb|CBH20300.1| putative 50S ribosomal protein L25 1 (General stress protein CTC 1) [Clostridium sticklandii] Length = 193 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 4/168 (2%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 A LRK IP ++YG+ D + + K+ K Y K T +I + V KD Sbjct: 10 AGALRKQDMIPGVVYGHGIDAISVKVPRKEFVKS-YEKFRQTKTFNCEIDQSPHQVYIKD 68 Query: 81 YQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 Q D ++ + + H D L+VS + +P+ + +QG + +++ + Sbjct: 69 VQRDVLNPEKITHFDLLKVSSSDKIHTRLPIVLLGRENIE--RQGLIVQQSLNDIDVKYQ 126 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +SI +D+ + K GD + + DI++P+ + +++ +A+I P Sbjct: 127 VGKGLESIEIDIVNFKDGDMLKVSDIKVPDYVDVLEDMDMLVASIAHP 174 >gi|84394035|ref|ZP_00992773.1| ribosomal protein L25 [Vibrio splendidus 12B01] gi|84375372|gb|EAP92281.1| ribosomal protein L25 [Vibrio splendidus 12B01] Length = 92 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA+IYG + I L ++ ++ F I Sbjct: 2 KFEAVVRTELGKGASRRLRHTGKFPAVIYGGEAAAVAIELVHAEVINQMDKPEFYEAITL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L G E V V P+D Q + H DF+++ Sbjct: 62 LIDGAE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|254507008|ref|ZP_05119146.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] gi|219550003|gb|EED26990.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] Length = 92 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|260906161|ref|ZP_05914483.1| 50S ribosomal protein L25P [Brevibacterium linens BL2] Length = 213 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 12/166 (7%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + KL A R + GKG+AR R+ G+IPA++YG+ DP I++ L N + I Sbjct: 3 DFKLIAEPRTEFGKGAARRTRRAGRIPAVVYGHGGDPVHISIDGHATMMALKHANALFEI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + D G + V I +D Q D V+ + H D + V G V V VPV I E+ +PG Sbjct: 63 ESTD-GAKNVLAIARDVQTDAVTREIEHLDLIIVKRGEKVEVDVPVHLIGES-APG---- 116 Query: 125 GKLNVVCHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 +V E S + A +P+ I V ++ G+ + I L Sbjct: 117 ---TMVQQEESTILIKADATKLPEYIEVTIDGRAAGEHVLAGQIEL 159 >gi|218549601|ref|YP_002383392.1| 50S ribosomal protein L25 [Escherichia fergusonii ATCC 35469] gi|226736321|sp|B7LJS7|RL25_ESCF3 RecName: Full=50S ribosomal protein L25 gi|218357142|emb|CAQ89776.1| 50S ribosomal subunit protein L25 [Escherichia fergusonii ATCC 35469] gi|323968115|gb|EGB63525.1| ribosomal L25p family protein [Escherichia coli M863] gi|323977616|gb|EGB72702.1| ribosomal L25p family protein [Escherichia coli TW10509] gi|324114398|gb|EGC08367.1| ribosomal L25p family protein [Escherichia fergusonii B253] gi|325497998|gb|EGC95857.1| 50S ribosomal protein L25 [Escherichia fergusonii ECD227] gi|327252434|gb|EGE64093.1| ribosomal L25p family protein [Escherichia coli STEC_7v] Length = 94 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 48/90 (53%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R++ GKG++R LR + PAIIYG P +AL + F + +LT+ Sbjct: 4 INAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L+H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|148979342|ref|ZP_01815474.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] gi|145961882|gb|EDK27174.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] Length = 92 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA+IYG + I L+ ++ ++ F I Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVSIELNHDEVINQMDKPEFYEAITL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L G E V V P+D Q + H DF+++ Sbjct: 62 LIDGAE-VKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|323494532|ref|ZP_08099637.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323496670|ref|ZP_08101721.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] gi|323311259|gb|EGA64418.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323318252|gb|EGA71212.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] Length = 92 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F I+ Sbjct: 2 KFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEGIVL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G E V V P+D Q + H DF+++ Sbjct: 62 VIDGAE-VKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|300088474|ref|YP_003758996.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528207|gb|ADJ26675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 217 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 11/182 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R+ GK + R LR+ G P IYG+ + + + + + + + +++L Sbjct: 6 LAVARRETTGKKN-RFLRRAGVTPCHIYGHSIASETVQADTAALEQVIATAG-SSRLVSL 63 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + GK+ ++ Q PV + ++H DF QV + +P+ E S +K G+ Sbjct: 64 EFKGKKPRMAFVREVQRPPVGNSILHVDFYQVKMTEKIAARIPLHLTGE--SAALKAKGR 121 Query: 127 L--NVVCH-EVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIA 182 N + H EV L PA NIP S+TVD++ L+ + D+I++ D+ L + + ++ +A Sbjct: 122 YLTNPIDHIEVESL-PA-NIPASVTVDISVLETLDDAIYVSDLGLDKSVTLLTDPETLVA 179 Query: 183 TI 184 I Sbjct: 180 KI 181 >gi|307128535|ref|YP_003880565.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] gi|306482997|gb|ADM89867.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] Length = 190 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G IP IIY + K L + + K + + IL + + + + K+ Q Sbjct: 22 LRNYGYIPCIIYSKNKNIKFYVLLS-ILKKIILTYKVYKVILEMK-NENKIEALLKEIQF 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 P++D +IH DF ++ + + + +P+ + S G+ +GG+ + +++ + +++ Sbjct: 80 HPINDEIIHVDFFELKKDKYIIISIPIISVGH--SLGVSKGGEYKLFLNKIKIKIITDDL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 D I +++N+L IGDS+++++I P K + N IA+I Sbjct: 138 LDHINLNINNLDIGDSLYIKNIYNP-KYIILHNSNEVIASI 177 >gi|227832720|ref|YP_002834427.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|262182791|ref|ZP_06042212.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|227453736|gb|ACP32489.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R + GKG AR LR G+IP ++YG+ D A+ +++ L + + + L Sbjct: 8 LKAEVRSEFGKGFARRLRAAGKIPGVVYGHAVDVLHFAVDRLEMTA-LVRNHGVNAVFEL 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E V+ K + ++ + H D L + G V V + +PG+ Sbjct: 67 ELEGEQHLVMVKHIDQNVLTFNIDHIDLLSIKRGEKVEV-EVPVVLEGEPAPGLMFIQDA 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +V+ E +L NIP+ I V + L+ G + ++ LPE T+ ++ + I +I P Sbjct: 126 DVLLVEADVL----NIPEEIVVSIEGLEDGTVVTAGEVSLPEGTTLAAEEDTVIVSISEP 181 >gi|253989145|ref|YP_003040501.1| 50S ribosomal protein L25 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780595|emb|CAQ83757.1| 50s ribosomal protein l25 [Photorhabdus asymbiotica] Length = 94 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR+ + PAI+YG +P I L + + F + ILTL Sbjct: 4 INAEVRKEQGKGASRRLRRANKFPAIVYGGKQEPVSIELDHDQVINMEHKAEFYSEILTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V + Q P L H DFL+ Sbjct: 64 VIDGKETKVKVQAVQRHPFKPKLAHIDFLRA 94 >gi|323144481|ref|ZP_08079083.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] gi|322415759|gb|EFY06491.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] Length = 95 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 48/91 (52%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV+R +G+G++R LR+ +IPAII + I L K + F + +T+ Sbjct: 5 LDAVVRTDLGRGASRRLRREARIPAIIVAPGQETVSITLDEKKLIVAALKDEFYSETVTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ + V P Q PV+ +IH DF++V Sbjct: 65 NLDGSAIAVKPVAMQRHPVTSRIIHVDFMRV 95 >gi|300932604|ref|ZP_07147860.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium resistens DSM 45100] Length = 222 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 6/179 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++P ++YGN DP + + ++ L ++ + ++ Sbjct: 5 TRLKGEVRTEFGKGASRRLRRDFRVPVVVYGNHLDPMHVHVDILELQAILRNEG-VNAVI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ K + ++ + HAD L V G V V +N +PG + Sbjct: 64 ELEVEGQDHLVMIKAVDQNVLTLDVDHADMLNVKRGEKVEV-EVPVVVNGEPAPGAQVMQ 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + V +L +IP+ I V + +IGD I D+++P S +S+ + I + Sbjct: 123 DADFVL----VLADVLDIPEEIEVSVEGKEIGDQILAGDLQIPGNASLVSEEDTLIVNV 177 >gi|170767283|ref|ZP_02901736.1| ribosomal L25p family [Escherichia albertii TW07627] gi|170123617|gb|EDS92548.1| ribosomal L25p family [Escherichia albertii TW07627] Length = 94 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P +AL + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRTANKFPAIIYGGNEAPLAVALGHDKVMNMQVKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L+H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|293977771|ref|YP_003543201.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri DMIN] gi|292667702|gb|ADE35337.1| ribosomal protein L25, Ctc-form [Candidatus Sulcia muelleri DMIN] Length = 186 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 11/165 (6%) Query: 22 RLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL-VHVIPK 79 R LR G IP I+YG N + I LS + K +Y+ + L+I E + + K Sbjct: 20 RELRNYGYIPCIVYGINKNIKFYILLSI--LKKVIYT----FKVYKLEIKNEYKIEALLK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + Q +P++D +IH DF ++ + + + VP+ + S G+ +GG+ + +++L Sbjct: 74 EIQFNPINDDVIHVDFYELKKNKYIIISVPIISVGH--SLGVSKGGEYKIFIKKINLKVI 131 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I D + +D+++L IGD++ +++I P K + N IA++ Sbjct: 132 PEFILDHMDIDISNLDIGDNLSIKNIYNP-KYIILHNCNDVIASV 175 >gi|311113110|ref|YP_003984332.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] gi|310944604|gb|ADP40898.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] Length = 98 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A R GKG AR +R G IPA+IYGN +PK + L + + +K+ + Sbjct: 7 EIKITAEPRTDFGKGYARRIRAVGDIPAVIYGNGKEPKHVILPGHATTMAVRNKD---VV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L +++ E +D Q P+ L H D L V Sbjct: 64 LVIEVDGEQFKTRVQDIQRHPIRPELQHIDLLFV 97 >gi|209695530|ref|YP_002263459.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] gi|226736274|sp|B6EI32|RL25_ALISL RecName: Full=50S ribosomal protein L25 gi|208009482|emb|CAQ79769.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] Length = 92 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R + GKG++R LR G+ PAI+YG P I L D+ ++ F I Sbjct: 2 KFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIELIHFDVINQMDKPEFYEAI-E 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGATVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|302387238|ref|YP_003823060.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] gi|302197866|gb|ADL05437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] Length = 196 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 12/167 (7%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR---LYSKNFMTTILTLD 68 +R KG L++ G + I G D IA+ KD+ +R + +N + ++ D Sbjct: 11 LRKSTRKGDNNQLKREGYLLGNIAGKGVDSISIAVK-KDVFRRSMKEFGRNGVFKLVVPD 69 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL- 127 + V+ K+ ++PV + + H DF VS + V ++F + + +L Sbjct: 70 --GQSYTVMAKEIHIEPVKNEISHLDFQMVSFSEKIKQEVAIKFTGAE----LLESKRLL 123 Query: 128 -NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 N + L +IPD I +D+++++ G+SI DI+LPE +S Sbjct: 124 INSTIDSILLEGLPQDIPDEIEIDVSNMEAGESIQFSDIKLPEGLTS 170 >gi|59711469|ref|YP_204245.1| 50S ribosomal protein L25 [Vibrio fischeri ES114] gi|68053021|sp|Q5E6I9|RL25_VIBF1 RecName: Full=50S ribosomal protein L25 gi|59479570|gb|AAW85357.1| 50S ribosomal subunit protein L25 [Vibrio fischeri ES114] Length = 92 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K AV+R + GKG++R LR G+ PAI+YG P IAL + ++ F I Sbjct: 2 KFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEAI-E 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 LVIDGAAVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|304439505|ref|ZP_07399413.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372013|gb|EFM25611.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 209 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 3/153 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD+ GK LR+ G +P ++Y + I + KD+ K Y +N ++ I D+ Sbjct: 8 RDQHGKNKVDKLRQEGLVPGVVYSKGEEAVSITVVEKDLVKA-YEENGLSNIFKADLDGA 66 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 ++ K+ Q P + ++H D + + V +PV + E + Q + + Sbjct: 67 QKDLLIKEIQKHPFKNQILHFDAYLIDMTQKIRVTIPV--VLEGRDNIKAQPSVIMQIID 124 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + + C ++P V++ D++IGD++ + D+ Sbjct: 125 SIEIECLPGDLPSEAVVNVVDMQIGDNMTVADL 157 >gi|294140651|ref|YP_003556629.1| 50S ribosomal protein L25 [Shewanella violacea DSS12] gi|293327120|dbj|BAJ01851.1| ribosomal protein L25 [Shewanella violacea DSS12] Length = 95 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 48/88 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG + I + KDI +K+F T LT+ Sbjct: 5 IAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKESISIKFNQKDIINIQENKDFFTGELTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 I + + V + Q ++ H DF Sbjct: 65 AIDGKEIKVRVQAMQRHAFKALIEHVDF 92 >gi|212635580|ref|YP_002312105.1| 50S ribosomal protein L25 [Shewanella piezotolerans WP3] gi|226736367|sp|B8CPE2|RL25_SHEPW RecName: Full=50S ribosomal protein L25 gi|212557064|gb|ACJ29518.1| Ribosomal protein L25 [Shewanella piezotolerans WP3] Length = 95 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 49/88 (55%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F TT LT+ Sbjct: 5 IAAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQANEDFYTTDLTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 + + V V +D Q ++ H DF Sbjct: 65 SLDGKDVAVRVQDMQRHAFKPLIEHIDF 92 >gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] gi|91073049|gb|ABE07930.1| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|307554254|gb|ADN47029.1| 50S ribosomal subunit protein L25 [Escherichia coli ABU 83972] Length = 126 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P + L + F + +LT+ Sbjct: 36 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSEVLTI 95 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L+H DF++ Sbjct: 96 VVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 125 >gi|291517978|emb|CBK73199.1| ribosomal protein L25, Ctc-form [Butyrivibrio fibrisolvens 16/4] Length = 195 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 8/149 (5%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G ++ P+ K+ SK+ T +TLD+ + +V+ K Sbjct: 15 AKRLRREGYVTGNLFGRDIEQSIPLQFEVKEAEALRKSKH---TQMTLDLEGKKYNVLLK 71 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + D ++ DF ++ +G +H + ENK + G L + EV+ Sbjct: 72 ELHFDAAKHQIVEMDFQELVKGE--VIHATAEVVLENKEAVTE--GVLEQLVSEVAYKAK 127 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 A ++ + I +D + L++GD+I + D+ + Sbjct: 128 AEDVVEKIEIDCSSLRLGDTITVADLAIA 156 >gi|182417130|ref|ZP_02625554.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667625|ref|ZP_04527609.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378972|gb|EDT76478.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237655973|gb|EEP53529.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 195 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 5/175 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R K SA+ RK GQ+P IIYG + D+ L + ++ D Sbjct: 9 RMKNSSNSAKKERKKGQVPGIIYGKKLGNLMFEIGEMDLVSEL-NITGEHGVINFDFDGY 67 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG-KLNVVC 131 I KD Q D ++ ++H D +VS V VP++F N + Q G L Sbjct: 68 NGTAIIKDIQKDALTHKVMHIDLEEVSSNENVIAEVPIKF---NGKDFLSQKGVVLQSQK 124 Query: 132 HEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V + C ++P SI +D++ G + + D+ + + S + L A++V Sbjct: 125 DSVKVSCKPQDLPKSINIDVSKAHGGSTYKLSDLEVGAEISIVDDLATVCASVVT 179 >gi|170754875|ref|YP_001782856.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169120087|gb|ACA43923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] Length = 189 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A++R+K GK RK G P IIYG M + + + + L +K + + Sbjct: 4 ASLTAIVREKSGKKC----RKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGINSR 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+IG + +V+ K+ Q + + +++ D VS + +PV+F E K +G Sbjct: 59 LWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKG 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I V + + + GD+I + DI+L E Sbjct: 117 FLLEEFTPYIEVAGKVGILPEIIVVSVGENQPGDNIKVSDIKLDE 161 >gi|118474948|ref|YP_891538.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter fetus subsp. fetus 82-40] gi|118414174|gb|ABK82594.1| ribosomal protein L25, Ctc-form [Campylobacter fetus subsp. fetus 82-40] Length = 178 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 6/160 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K S + LRK+G + A IY + A D K + K+ + + Sbjct: 2 LEGIVRESIDKRSTKALRKDGYLIANIYAKGVENINAAFKVNDFIKAVKVKSDLK--FQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGK 126 +G + V+ DYQ PV+ L H D V + +PV+ +P G K G Sbjct: 60 SVGGKTYDVVVVDYQKHPVTSALKHVDLKVVLDDEVSKYMIPVKPFG---TPIGFKNKGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 L +++ C ++ +S VD++ L + D+I + DI+ Sbjct: 117 LLQSKKRLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIK 156 >gi|153939671|ref|YP_001392568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152935567|gb|ABS41065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|295320554|gb|ADG00932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. 230613] Length = 189 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A++R+K GK RK G P IIYG M + + + + L +K + + Sbjct: 4 ASLTAIVREKSGKKC----RKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGINSR 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+IG + +V+ K+ Q + + +++ D VS + +PV+F E K +G Sbjct: 59 LWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKF--EGKEQLEHKG 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + + +P+ I V + + + GD+I + DI+L E Sbjct: 117 FLLEEFTPYIEVAGKVGILPEIIVVSVGENEPGDNIKVSDIKLDE 161 >gi|238897689|ref|YP_002923368.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465446|gb|ACQ67220.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 99 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Query: 8 LSAVMRDKVGKGSA--RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTI 64 ++A +R K KG+A R RK G PA +YG P I L D+ K L + F I Sbjct: 4 INAKLRQKEEKGTAASRRFRKAGLFPATVYGGSLPPVSIVLD-HDVVKNLEANPAFYNEI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSE 100 LTL++G+E V + Q P L H DF++ +E Sbjct: 63 LTLEVGEEKTKVKIQAIQRHPFKPKLTHMDFIRANE 98 >gi|167624264|ref|YP_001674558.1| 50S ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] gi|189042371|sp|B0TIW4|RL25_SHEHH RecName: Full=50S ribosomal protein L25 gi|167354286|gb|ABZ76899.1| ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] Length = 95 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 49/88 (55%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ LT+ Sbjct: 5 IAAQVRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSELTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 + + V V +D Q ++ H DF Sbjct: 65 ALEGKDVKVRVQDMQRHAFKPMIEHVDF 92 >gi|213965445|ref|ZP_03393640.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] gi|213951829|gb|EEB63216.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] Length = 213 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 K+ A R + GKG+AR R G IP +IYG ++ PK I + D + + + + Sbjct: 7 IKIEARNRTEFGKGAARRARVAGDIPVVIYGADLDAPKHILVDTLDFHAVIRNHG-VNAV 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++I E + K +P++ + HAD L + V V VPV E + G Sbjct: 66 LDVNIEGESQLSMVKAVDQNPLTLDIDHADLLAIHRDEKVEVEVPVVPTGE-----LAPG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + + P IP+ I V + ++G +H D+ LPE ++ I I Sbjct: 121 ALLMQDAETILVNAPVLAIPEEIEVSVEGAEVGTMVHAGDVTLPEGLVLTDDADLLIFNI 180 Query: 185 VAP 187 V P Sbjct: 181 VEP 183 >gi|110642396|ref|YP_670126.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|161486176|ref|NP_754608.2| 50S ribosomal protein L25 [Escherichia coli CFT073] gi|162138406|ref|YP_541461.2| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|170680132|ref|YP_001744381.1| 50S ribosomal protein L25 [Escherichia coli SMS-3-5] gi|191169977|ref|ZP_03031531.1| ribosomal L25p family [Escherichia coli F11] gi|215487407|ref|YP_002329838.1| 50S ribosomal protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218559106|ref|YP_002392019.1| 50S ribosomal protein L25 [Escherichia coli S88] gi|218690334|ref|YP_002398546.1| 50S ribosomal protein L25 [Escherichia coli ED1a] gi|218700657|ref|YP_002408286.1| 50S ribosomal protein L25 [Escherichia coli IAI39] gi|218705717|ref|YP_002413236.1| 50S ribosomal protein L25 [Escherichia coli UMN026] gi|227887242|ref|ZP_04005047.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|237704658|ref|ZP_04535139.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|293405653|ref|ZP_06649645.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|293410549|ref|ZP_06654125.1| ribosomal L25p family protein [Escherichia coli B354] gi|298381335|ref|ZP_06990934.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300897754|ref|ZP_07116147.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300935113|ref|ZP_07150144.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|300981433|ref|ZP_07175514.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300982905|ref|ZP_07176369.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|301021041|ref|ZP_07185084.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|301048925|ref|ZP_07195918.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|306814700|ref|ZP_07448862.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|331647841|ref|ZP_08348933.1| ribosomal L25p family protein [Escherichia coli M605] gi|331658266|ref|ZP_08359228.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331663690|ref|ZP_08364600.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331673707|ref|ZP_08374470.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331683865|ref|ZP_08384461.1| ribosomal L25p family protein [Escherichia coli H299] gi|68053217|sp|Q8FFS1|RL25_ECOL6 RecName: Full=50S ribosomal protein L25 gi|123343824|sp|Q0TFQ4|RL25_ECOL5 RecName: Full=50S ribosomal protein L25 gi|226736312|sp|B7MFA0|RL25_ECO45 RecName: Full=50S ribosomal protein L25 gi|226736314|sp|B7NN00|RL25_ECO7I RecName: Full=50S ribosomal protein L25 gi|226736317|sp|B7N5E9|RL25_ECOLU RecName: Full=50S ribosomal protein L25 gi|226736319|sp|B1LKT4|RL25_ECOSM RecName: Full=50S ribosomal protein L25 gi|254801045|sp|B7UFK2|RL25_ECO27 RecName: Full=50S ribosomal protein L25 gi|254801047|sp|B7MXK1|RL25_ECO81 RecName: Full=50S ribosomal protein L25 gi|110343988|gb|ABG70225.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|170517850|gb|ACB16028.1| ribosomal L25p family [Escherichia coli SMS-3-5] gi|190909493|gb|EDV69078.1| ribosomal L25p family [Escherichia coli F11] gi|215265479|emb|CAS09880.1| 50S ribosomal subunit protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218365875|emb|CAR03616.1| 50S ribosomal subunit protein L25 [Escherichia coli S88] gi|218370643|emb|CAR18452.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI39] gi|218427898|emb|CAR08817.2| 50S ribosomal subunit protein L25 [Escherichia coli ED1a] gi|218432814|emb|CAR13708.1| 50S ribosomal subunit protein L25 [Escherichia coli UMN026] gi|222033946|emb|CAP76687.1| 50S ribosomal protein L25 [Escherichia coli LF82] gi|226901024|gb|EEH87283.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|227835592|gb|EEJ46058.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|281179277|dbj|BAI55607.1| 50S ribosomal protein L25 [Escherichia coli SE15] gi|284922169|emb|CBG35251.1| 50S ribosomal protein L25 [Escherichia coli 042] gi|291427861|gb|EFF00888.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|291471017|gb|EFF13501.1| ribosomal L25p family protein [Escherichia coli B354] gi|294490536|gb|ADE89292.1| ribosomal L25p family [Escherichia coli IHE3034] gi|298278777|gb|EFI20291.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300299301|gb|EFJ55686.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|300307506|gb|EFJ62026.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300358469|gb|EFJ74339.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300398293|gb|EFJ81831.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|300408705|gb|EFJ92243.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|300459694|gb|EFK23187.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|305852094|gb|EFM52546.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|307626274|gb|ADN70578.1| 50S ribosomal protein L25 [Escherichia coli UM146] gi|312946805|gb|ADR27632.1| 50S ribosomal protein L25 [Escherichia coli O83:H1 str. NRG 857C] gi|315285739|gb|EFU45179.1| ribosomal L25p family protein [Escherichia coli MS 110-3] gi|315294445|gb|EFU53793.1| ribosomal L25p family protein [Escherichia coli MS 153-1] gi|315297947|gb|EFU57217.1| ribosomal L25p family protein [Escherichia coli MS 16-3] gi|320196059|gb|EFW70683.1| LSU ribosomal protein L25p [Escherichia coli WV_060327] gi|323188088|gb|EFZ73383.1| ribosomal L25p family protein [Escherichia coli RN587/1] gi|323951981|gb|EGB47855.1| ribosomal L25p family protein [Escherichia coli H252] gi|323955955|gb|EGB51708.1| ribosomal L25p family protein [Escherichia coli H263] gi|324006504|gb|EGB75723.1| ribosomal L25p family protein [Escherichia coli MS 57-2] gi|324013927|gb|EGB83146.1| ribosomal L25p family protein [Escherichia coli MS 60-1] gi|330912018|gb|EGH40528.1| LSU ribosomal protein L25p [Escherichia coli AA86] gi|331043565|gb|EGI15703.1| ribosomal L25p family protein [Escherichia coli M605] gi|331056514|gb|EGI28523.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331059489|gb|EGI31466.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331068980|gb|EGI40372.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331078817|gb|EGI50019.1| ribosomal L25p family protein [Escherichia coli H299] Length = 94 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P + L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L+H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|161936313|ref|YP_129747.2| 50S ribosomal protein L25 [Photobacterium profundum SS9] gi|68053167|sp|Q6LRY1|RL25_PHOPR RecName: Full=50S ribosomal protein L25 Length = 92 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 2 KFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGIIL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF +V Sbjct: 62 VIDGQE-VAVKPQDIQRHVFKPKVEHMDFKRV 92 >gi|46913156|emb|CAG19945.1| putative ribosomal protein L25 [Photobacterium profundum SS9] Length = 109 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 18 MKFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 77 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF +V Sbjct: 78 LVIDGQE-VAVKPQDIQRHVFKPKVEHMDFKRV 109 >gi|110615712|gb|ABF04379.1| 50S ribosomal subunit protein L25 [Shigella flexneri 5 str. 8401] Length = 118 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 28 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTI 87 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 88 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 118 >gi|255327297|ref|ZP_05368371.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] gi|255295577|gb|EET74920.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] Length = 94 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R GKG AR R G+IPA+IYGN ++PK + L + + + + + Sbjct: 3 EIKIVAEPRVDFGKGYARRARVAGKIPAVIYGNGAEPKHVTLPGHETTLAVRQAD---AV 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 L +++ E + +D Q P+ L H D + V+ Sbjct: 60 LAIEVEGETIKARVQDIQRHPIRPELQHIDLVFVA 94 >gi|332278657|ref|ZP_08391070.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|332101009|gb|EGJ04355.1| 50S ribosomal protein L25 [Shigella sp. D9] Length = 126 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 36 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTI 95 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 96 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 126 >gi|312967485|ref|ZP_07781700.1| ribosomal L25p family protein [Escherichia coli 2362-75] gi|312287682|gb|EFR15587.1| ribosomal L25p family protein [Escherichia coli 2362-75] Length = 94 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P + L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSKVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L+H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|332093192|gb|EGI98252.1| ribosomal L25p family protein [Shigella boydii 5216-82] Length = 94 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L+ + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELAHDKVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|90410519|ref|ZP_01218535.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] gi|90328760|gb|EAS45044.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] Length = 92 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K A++R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 2 KFDAIVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGIIL 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + G+E V V P+D Q + H DF +V Sbjct: 62 VIDGQE-VAVKPQDIQRHAFKPKVEHMDFKRV 92 >gi|83315860|ref|XP_730975.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490868|gb|EAA22540.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 285 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Query: 23 LLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELVH 75 LL+ +G IPAII+ D K I ++ K+I + + + F + + IG E+V Sbjct: 69 LLQAHGYIPAIIW-KYGDEKRICINHKEIDEYAFEEEDGHLSLLFSARLFKIHIGDEVVE 127 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 + + DPV + F +V E V+VP + SP G + + + + Sbjct: 128 CVVSHVEADPVEKHIYFLKFARVVENEITQVNVPCSIVGLIGSPAYINGYHVQLALNYIK 187 Query: 136 LLCPANNIPDSITVDLNDL 154 NNIP +D++ L Sbjct: 188 CNVLGNNIPPPFQIDVSKL 206 >gi|34499512|ref|NP_903727.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] gi|71153134|sp|Q7NQT0|RL25_CHRVO RecName: Full=50S ribosomal protein L25 gi|34105362|gb|AAQ61717.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] Length = 95 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R +G G++R LR+ G++PA++YG D + L + + +F T++L Sbjct: 4 ELIAAKRVDLGTGASRRLRRAGKLPAVVYGAGKDAVSLELDHNTLYHAVKHADFHTSVLE 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V +Q+ P ++H DF +V Sbjct: 64 LVIDGQKEQVKVAAFQMHPYKQQVLHIDFARV 95 >gi|157961782|ref|YP_001501816.1| 50S ribosomal protein L25 [Shewanella pealeana ATCC 700345] gi|189042372|sp|A8H3Z4|RL25_SHEPA RecName: Full=50S ribosomal protein L25 gi|157846782|gb|ABV87281.1| ribosomal protein L25 [Shewanella pealeana ATCC 700345] Length = 95 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 49/88 (55%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ LT+ Sbjct: 5 IAAQVRTEIGKGSSRRLRHAKKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSELTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 + + V V +D Q ++ H DF Sbjct: 65 ALEGKDVKVRVQDMQRHAFKPMIEHVDF 92 >gi|167044231|gb|ABZ08912.1| putative ribosomal L25p family protein [uncultured marine microorganism HF4000_APKG5H11] Length = 297 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 10/180 (5%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R+ +GK RL R+ G +P +YG +P+ + + + + L T I G+ Sbjct: 92 RELMGKKVGRL-RRAGIVPVHLYGPGMEPRALQCNTSQLIRVLAKAGGATPIHITIQGES 150 Query: 73 LVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVC 131 H+ ++ Q DP D L+H D L VT VP+ + E+ G V Sbjct: 151 GTHLAFAREIQWDPKRDDLLHVDLLAADISRPVTAQVPIILVGESAGARTVSG----TVM 206 Query: 132 HE---VSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNITIATIVAP 187 H+ V + +P I +D++ ++ DS I + D+ +PE + +S + + I P Sbjct: 207 HQLRTVDIQALPLEMPSQIELDISVMEEPDSVIRVSDLAIPENATLLSDVEDLVVRIELP 266 >gi|320174781|gb|EFW49907.1| LSU ribosomal protein L25p [Shigella dysenteriae CDC 74-1112] Length = 94 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG + P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKAAPLAIELDHDKVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|148927895|ref|ZP_01811306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] gi|147886757|gb|EDK72316.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] Length = 231 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 4/166 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDIS-KRLYSKNFMTTILTLDIGKELVHVIPKDYQ 82 LR++GQ+P ++YG +P I++ A + ++L + L+I + K+ Sbjct: 23 LRRDGQVPGVVYGQGFEP--ISVQAPLVPLQKLVKTAGKHHPVQLNIAGSKKTAMIKEIS 80 Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 +DPV ++L H F V + VT +PV +SP + G + + + + Sbjct: 81 MDPVKNLLRHVAFHAVRQDEKVTADIPVVLEGLGESPAERAGLVILTTVESLQVKAFPGD 140 Query: 143 IPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +P+++TV + L + G + + D+ +P ++ +A++ P Sbjct: 141 LPNALTVSTSTLSEAGQHLTVADLSIPSGVEIDAEPEQVLASVYEP 186 >gi|6980397|pdb|1B75|A Chain A, Solution Structure Of Ribosomal Protein L25 From Escherichia Coli Length = 94 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|153855422|ref|ZP_01996553.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] gi|149752076|gb|EDM62007.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] Length = 197 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 6/148 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G M + P+ + + + L + + + ++ LDI E ++V+ K Sbjct: 15 AKKLRREGYVTGNVFGREMKESVPVKMEKAAVDRLLKACHKGSQVM-LDIEGEKMNVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D + +P+ + DF + V + + K G G L + EV Sbjct: 74 DVEFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVGHEKDAG----GVLEQLLEEVQFKAY 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + + D + VD++++K+GDSI ++D+ L Sbjct: 130 PSALVDKVEVDVSNMKVGDSIKVKDLTL 157 >gi|157375586|ref|YP_001474186.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] gi|189042373|sp|A8FW35|RL25_SHESH RecName: Full=50S ribosomal protein L25 gi|157317960|gb|ABV37058.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] Length = 95 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 48/88 (54%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F ++ LT+ Sbjct: 5 IAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKEPISIKFDHKDIINIQENADFYSSDLTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 + + V V + Q ++ H DF Sbjct: 65 TVDGKDVKVRVQAMQRHAFKGLIEHIDF 92 >gi|16130123|ref|NP_416690.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30063628|ref|NP_837799.1| 50S ribosomal protein L25 [Shigella flexneri 2a str. 2457T] gi|56480061|ref|NP_708084.2| 50S ribosomal protein L25 [Shigella flexneri 2a str. 301] gi|74312706|ref|YP_311125.1| 50S ribosomal protein L25 [Shigella sonnei Ss046] gi|82776212|ref|YP_402561.1| 50S ribosomal protein L25 [Shigella dysenteriae Sd197] gi|89109003|ref|AP_002783.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. W3110] gi|157158450|ref|YP_001463538.1| 50S ribosomal protein L25 [Escherichia coli E24377A] gi|157161667|ref|YP_001458985.1| 50S ribosomal protein L25 [Escherichia coli HS] gi|170019498|ref|YP_001724452.1| 50S ribosomal protein L25 [Escherichia coli ATCC 8739] gi|170081807|ref|YP_001731127.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188493756|ref|ZP_03001026.1| ribosomal L25p family [Escherichia coli 53638] gi|191165343|ref|ZP_03027185.1| ribosomal L25p family [Escherichia coli B7A] gi|193062225|ref|ZP_03043320.1| ribosomal L25p family [Escherichia coli E22] gi|193068236|ref|ZP_03049200.1| ribosomal L25p family [Escherichia coli E110019] gi|194427121|ref|ZP_03059672.1| ribosomal L25p family [Escherichia coli B171] gi|194436155|ref|ZP_03068257.1| ribosomal L25p family [Escherichia coli 101-1] gi|209919645|ref|YP_002293729.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218554755|ref|YP_002387668.1| 50S ribosomal protein L25 [Escherichia coli IAI1] gi|218695800|ref|YP_002403467.1| 50S ribosomal protein L25 [Escherichia coli 55989] gi|229774940|ref|YP_689684.2| 50S ribosomal protein L25 [Shigella flexneri 5 str. 8401] gi|238901362|ref|YP_002927158.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|253772888|ref|YP_003035719.1| 50S ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162200|ref|YP_003045308.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|256017646|ref|ZP_05431511.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|256022130|ref|ZP_05435995.1| 50S ribosomal protein L25 [Escherichia sp. 4_1_40B] gi|260844791|ref|YP_003222569.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|260856159|ref|YP_003230050.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|260868886|ref|YP_003235288.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|291283439|ref|YP_003500257.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|293415471|ref|ZP_06658114.1| ribosomal L25p family protein [Escherichia coli B185] gi|293446537|ref|ZP_06662959.1| ribosomal L25p family protein [Escherichia coli B088] gi|297521512|ref|ZP_06939898.1| 50S ribosomal protein L25 [Escherichia coli OP50] gi|300819118|ref|ZP_07099320.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300822638|ref|ZP_07102776.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300902162|ref|ZP_07120162.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300918833|ref|ZP_07135402.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300926293|ref|ZP_07142096.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300930421|ref|ZP_07145830.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300950050|ref|ZP_07163997.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300956856|ref|ZP_07169116.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|301024317|ref|ZP_07188006.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|301306202|ref|ZP_07212277.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|301328669|ref|ZP_07221730.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301644211|ref|ZP_07244219.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|307138845|ref|ZP_07498201.1| 50S ribosomal protein L25 [Escherichia coli H736] gi|307311235|ref|ZP_07590879.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|309786647|ref|ZP_07681267.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309793069|ref|ZP_07687497.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|312973561|ref|ZP_07787733.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|331642814|ref|ZP_08343949.1| ribosomal L25p family protein [Escherichia coli H736] gi|331653619|ref|ZP_08354620.1| ribosomal L25p family protein [Escherichia coli M718] gi|331668889|ref|ZP_08369737.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331678139|ref|ZP_08378814.1| ribosomal L25p family protein [Escherichia coli H591] gi|60393657|sp|P68918|RL25_SHIFL RecName: Full=50S ribosomal protein L25 gi|60393658|sp|P68919|RL25_ECOLI RecName: Full=50S ribosomal protein L25 gi|109893395|sp|Q32HY5|RL25_SHIDS RecName: Full=50S ribosomal protein L25 gi|109893396|sp|Q3Z022|RL25_SHISS RecName: Full=50S ribosomal protein L25 gi|166987891|sp|A7ZP09|RL25_ECO24 RecName: Full=50S ribosomal protein L25 gi|166987892|sp|A8A248|RL25_ECOHS RecName: Full=50S ribosomal protein L25 gi|189042355|sp|B1IY84|RL25_ECOLC RecName: Full=50S ribosomal protein L25 gi|226736315|sp|B7M535|RL25_ECO8A RecName: Full=50S ribosomal protein L25 gi|226736316|sp|B1X883|RL25_ECODH RecName: Full=50S ribosomal protein L25 gi|226736318|sp|B6I184|RL25_ECOSE RecName: Full=50S ribosomal protein L25 gi|254801046|sp|B7LAK9|RL25_ECO55 RecName: Full=50S ribosomal protein L25 gi|259646685|sp|C4ZU30|RL25_ECOBW RecName: Full=50S ribosomal protein L25 gi|6573331|pdb|1D6K|A Chain A, Nmr Solution Structure Of The 5s Rrna E-LoopL25 COMPLEX gi|6730329|pdb|1DFU|P Chain P, Crystal Structure Of E.Coli Ribosomal Protein L25 Complexed With A 5s Rrna Fragment At 1.8 A Resolution gi|14278052|pdb|1GIY|V Chain V, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix gi|28373738|pdb|1ML5|VV Chain v, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|33357920|pdb|1P85|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357948|pdb|1P86|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754063|pdb|2AW4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754119|pdb|2AWB|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666572|pdb|1VS6|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666624|pdb|1VS8|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116667453|pdb|2GYA|T Chain T, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667505|pdb|2GYC|T Chain T, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|118138112|pdb|2I2T|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138166|pdb|2I2V|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|119390366|pdb|2J28|V Chain V, Model Of E. Coli Srp Bound To 70s Rncs gi|157836058|pdb|2QOV|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836110|pdb|2QOX|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836162|pdb|2QOZ|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836214|pdb|2QP1|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157884251|pdb|487D|N Chain N, Seven Ribosomal Proteins Fitted To A Cryo-Electron Microscopic Map Of The Large 50s Subunit At 7.5 Angstroms Resolution gi|158429733|pdb|2QAM|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429785|pdb|2QAO|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429843|pdb|2QBA|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429895|pdb|2QBC|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429947|pdb|2QBE|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430000|pdb|2QBG|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430053|pdb|2QBI|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430106|pdb|2QBK|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431406|pdb|2Z4L|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431459|pdb|2Z4N|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988752|pdb|2VHM|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) gi|168988783|pdb|2VHN|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) gi|169404604|pdb|2RDO|V Chain V, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound gi|197107302|pdb|3DF2|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107354|pdb|3DF4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|209870355|pdb|3BBX|V Chain V, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex gi|224510751|pdb|3FIK|V Chain V, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|256032375|pdb|3E1B|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre- Accommodation State gi|256032432|pdb|3E1D|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Post- Accommodation State gi|257097363|pdb|3I1N|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097415|pdb|3I1P|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097469|pdb|3I1R|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097523|pdb|3I1T|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097578|pdb|3I20|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097633|pdb|3I22|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560353|pdb|3KCR|V Chain V, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|294662272|pdb|2WWQ|W Chain W, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308198376|pdb|1VT2|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198750|pdb|3ORB|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|308388028|pdb|3OFQ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388059|pdb|3OFR|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320086|pdb|3OFC|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320117|pdb|3OFD|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320190|pdb|3OFZ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320221|pdb|3OG0|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113675|pdb|3OAS|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113706|pdb|3OAT|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|326634231|pdb|3IZT|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634264|pdb|3IZU|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|329666037|pdb|3J01|V Chain V, Structure Of The Ribosome-Secye Complex In The Membrane Environment gi|216640|dbj|BAA02585.1| ribosomal protein L25 [Escherichia coli] gi|1788512|gb|AAC75246.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30041881|gb|AAP17608.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 2457T] gi|56383612|gb|AAN43791.2| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 301] gi|73856183|gb|AAZ88890.1| 50S ribosomal subunit protein L25 [Shigella sonnei Ss046] gi|81240360|gb|ABB61070.1| 50S ribosomal subunit protein L25 [Shigella dysenteriae Sd197] gi|85675294|dbj|BAE76650.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K12 substr. W3110] gi|157067347|gb|ABV06602.1| ribosomal L25p family [Escherichia coli HS] gi|157080480|gb|ABV20188.1| ribosomal L25p family [Escherichia coli E24377A] gi|169754426|gb|ACA77125.1| ribosomal protein L25 [Escherichia coli ATCC 8739] gi|169889642|gb|ACB03349.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188488955|gb|EDU64058.1| ribosomal L25p family [Escherichia coli 53638] gi|190904506|gb|EDV64213.1| ribosomal L25p family [Escherichia coli B7A] gi|192931891|gb|EDV84490.1| ribosomal L25p family [Escherichia coli E22] gi|192958515|gb|EDV88954.1| ribosomal L25p family [Escherichia coli E110019] gi|194414742|gb|EDX31013.1| ribosomal L25p family [Escherichia coli B171] gi|194424883|gb|EDX40868.1| ribosomal L25p family [Escherichia coli 101-1] gi|209765898|gb|ACI81261.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765904|gb|ACI81264.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209912904|dbj|BAG77978.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218352532|emb|CAU98309.1| 50S ribosomal subunit protein L25 [Escherichia coli 55989] gi|218361523|emb|CAQ99112.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI1] gi|238859864|gb|ACR61862.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|242377824|emb|CAQ32591.1| 50S ribosomal subunit protein L25, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253323932|gb|ACT28534.1| ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974101|gb|ACT39772.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|253978268|gb|ACT43938.1| 50S ribosomal protein L25 [Escherichia coli BL21(DE3)] gi|257754808|dbj|BAI26310.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|257759938|dbj|BAI31435.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|257765242|dbj|BAI36737.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|260448720|gb|ACX39142.1| ribosomal protein L25 [Escherichia coli DH1] gi|290763312|gb|ADD57273.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|291323367|gb|EFE62795.1| ribosomal L25p family protein [Escherichia coli B088] gi|291433119|gb|EFF06098.1| ribosomal L25p family protein [Escherichia coli B185] gi|299880414|gb|EFI88625.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|300316337|gb|EFJ66121.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|300405681|gb|EFJ89219.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300414076|gb|EFJ97386.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300417722|gb|EFK01033.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300450540|gb|EFK14160.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300461743|gb|EFK25236.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300524838|gb|EFK45907.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300528271|gb|EFK49333.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300838568|gb|EFK66328.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|300845061|gb|EFK72821.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301077509|gb|EFK92315.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|306908741|gb|EFN39238.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|308123355|gb|EFO60617.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|308925340|gb|EFP70827.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309702500|emb|CBJ01826.1| 50S ribosomal protein L25 [Escherichia coli ETEC H10407] gi|310332156|gb|EFP99391.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|313651299|gb|EFS15697.1| ribosomal L25p family protein [Shigella flexneri 2a str. 2457T] gi|315061495|gb|ADT75822.1| 50S ribosomal subunit protein L25 [Escherichia coli W] gi|315136819|dbj|BAJ43978.1| 50S ribosomal protein L25 [Escherichia coli DH1] gi|315255299|gb|EFU35267.1| ribosomal L25p family protein [Escherichia coli MS 85-1] gi|315615431|gb|EFU96063.1| ribosomal L25p family protein [Escherichia coli 3431] gi|320178859|gb|EFW53822.1| LSU ribosomal protein L25p [Shigella boydii ATCC 9905] gi|320184701|gb|EFW59494.1| LSU ribosomal protein L25p [Shigella flexneri CDC 796-83] gi|320199783|gb|EFW74372.1| LSU ribosomal protein L25p [Escherichia coli EC4100B] gi|320641256|gb|EFX10734.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. G5101] gi|320646645|gb|EFX15556.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. 493-89] gi|320651900|gb|EFX20275.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. H 2687] gi|320657625|gb|EFX25423.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663230|gb|EFX30539.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. USDA 5905] gi|320667981|gb|EFX34884.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. LSU-61] gi|323152227|gb|EFZ38517.1| ribosomal L25p family protein [Escherichia coli EPECa14] gi|323161737|gb|EFZ47619.1| ribosomal L25p family protein [Escherichia coli E128010] gi|323168666|gb|EFZ54346.1| ribosomal L25p family protein [Shigella sonnei 53G] gi|323171838|gb|EFZ57482.1| ribosomal L25p family protein [Escherichia coli LT-68] gi|323176914|gb|EFZ62504.1| ribosomal L25p family protein [Escherichia coli 1180] gi|323184189|gb|EFZ69566.1| ribosomal L25p family protein [Escherichia coli 1357] gi|323377924|gb|ADX50192.1| Ribosomal protein L25-like protein [Escherichia coli KO11] gi|323936802|gb|EGB33087.1| ribosomal L25p family protein [Escherichia coli E1520] gi|323940744|gb|EGB36932.1| ribosomal L25p family protein [Escherichia coli E482] gi|323945002|gb|EGB41067.1| ribosomal L25p family protein [Escherichia coli H120] gi|323961579|gb|EGB57186.1| ribosomal L25p family protein [Escherichia coli H489] gi|323972932|gb|EGB68129.1| ribosomal L25p family protein [Escherichia coli TA007] gi|324020659|gb|EGB89878.1| ribosomal L25p family protein [Escherichia coli MS 117-3] gi|324117974|gb|EGC11873.1| ribosomal L25p family protein [Escherichia coli E1167] gi|331039612|gb|EGI11832.1| ribosomal L25p family protein [Escherichia coli H736] gi|331048468|gb|EGI20544.1| ribosomal L25p family protein [Escherichia coli M718] gi|331064083|gb|EGI35994.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331074599|gb|EGI45919.1| ribosomal L25p family protein [Escherichia coli H591] gi|332343967|gb|AEE57301.1| ribosomal protein [Escherichia coli UMNK88] gi|332754828|gb|EGJ85193.1| ribosomal L25p family protein [Shigella flexneri 4343-70] gi|332755232|gb|EGJ85596.1| ribosomal L25p family protein [Shigella flexneri K-671] gi|332756582|gb|EGJ86933.1| ribosomal L25p family protein [Shigella flexneri 2747-71] gi|332765999|gb|EGJ96209.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2930-71] gi|333001326|gb|EGK20894.1| ribosomal L25p family protein [Shigella flexneri VA-6] gi|333001995|gb|EGK21561.1| ribosomal L25p family protein [Shigella flexneri K-218] gi|333002910|gb|EGK22466.1| ribosomal L25p family protein [Shigella flexneri K-272] gi|333016627|gb|EGK35956.1| ribosomal L25p family protein [Shigella flexneri K-304] gi|333016914|gb|EGK36238.1| ribosomal L25p family protein [Shigella flexneri K-227] gi|227856|prf||1712317A ribosomal protein L25 gi|229550|prf||754714A ribosomal protein L25 Length = 94 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|38233497|ref|NP_939264.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium diphtheriae NCTC 13129] gi|71153137|sp|Q6NI77|RL25_CORDI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|38199757|emb|CAE49417.1| Putative 50S ribosomal protein L25 [Corynebacterium diphtheriae] Length = 205 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 7/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R++ GKG AR LR GQ+P +IYG ++ P +++ ++ L + + I Sbjct: 5 TTIAAQPRNEFGKGFARRLRVAGQVPGVIYGVDVEAPIHFSINRLELHAVLRAHG-VNAI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E + K + ++ H D L + G V V VPV E +PG Sbjct: 64 IELDIEGEKHLTMIKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVVLTGET-APGTTLV 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +VV E +L +IP+ IT + L + + D+ +P TS ++ IA++ Sbjct: 123 QDADVVLVEADVL----SIPEEITFSVEGLDVDSKVLAGDLAMPANTSLVADAETVIASV 178 >gi|194434195|ref|ZP_03066462.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|194417524|gb|EDX33626.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|332096170|gb|EGJ01173.1| ribosomal L25p family protein [Shigella dysenteriae 155-74] Length = 94 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSKVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|270308609|ref|YP_003330667.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] gi|270154501|gb|ACZ62339.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] Length = 218 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 13/170 (7%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-----KRLYSKNFMTTILTLDIGKELVHV 76 +LLR G P I+G+ P +AL A + R S + + + LD K+ Sbjct: 19 KLLRAQGLTPVHIFGH-GLPS-LALQANTLELESTINRAGSSHLVN--IKLDTDKKTRKA 74 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVS 135 ++ Q P+ L H DF Q++ VT +P+ F E SP +K+ G KL ++ Sbjct: 75 FIREIQRHPIKGYLQHVDFYQINLKEKVTAEIPIHFSGE--SPLLKEKGHKLTAPFTHLT 132 Query: 136 LLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + +++P I +DL+ + ++++DI LP K +++ ++ +A + Sbjct: 133 VEALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGKARILNEPDLLVAKV 182 >gi|255017155|ref|ZP_05289281.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL F2-515] Length = 93 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G++P IIYG S+ P+++ + ++ K + N + ++ + + ++V+ +YQ+ Sbjct: 21 LRSEGKVPGIIYGYKSENVPVSVDSLELIKAV-RDNGRNAVFSVTVDGKKLNVLLHEYQV 79 Query: 84 DPVSDILIHADFL 96 DP+ D+L+H D L Sbjct: 80 DPLKDVLVHVDLL 92 >gi|307069530|ref|YP_003878007.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] gi|306482790|gb|ADM89661.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] Length = 214 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 3/155 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ + +R+K+G R +IP +IYGN + ++ K KN + Sbjct: 2 KIHSFIRNKLGTYYNNKNRYKNRIPGVIYGNNKKNINLIFKKSELFKIFKKKNINILKII 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 + + Q ++H D L++S V + +P++F N S +K + Sbjct: 62 FKKKIKKFLIKNI--QFHAYKKEILHIDLLRISNKKKVNILIPLKFKNIKNSYAVKSENA 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 +N + ++ + C IP I ++L +LK+ + I Sbjct: 120 FINFIYKKIPIFCLPKYIPKYILLNLKNLKVNNPI 154 >gi|70943513|ref|XP_741793.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520399|emb|CAH75563.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 225 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Query: 23 LLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELVH 75 LL+ +G IPAII+ + K I ++ K+I + + + F + + IG E+V Sbjct: 69 LLQAHGYIPAIIW-KYGEEKRICINHKEIDEYAFEEEDGHLSLLFSARLFKIHIGDEVVE 127 Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 + + DPV + F +V E V++P + SP G + + + + Sbjct: 128 CVVSHVEADPVEKHIYFLKFARVVENEITQVNIPCSIVGLIGSPAYINGYHVQLALNYIK 187 Query: 136 LLCPANNIPDSITVDLNDL 154 NNIP +D++ L Sbjct: 188 CNVLGNNIPPPFQIDVSKL 206 >gi|187731625|ref|YP_001879482.1| 50S ribosomal protein L25 [Shigella boydii CDC 3083-94] gi|226736369|sp|B2TV63|RL25_SHIB3 RecName: Full=50S ribosomal protein L25 gi|187428617|gb|ACD07891.1| ribosomal L25p family [Shigella boydii CDC 3083-94] Length = 94 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVINMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|89893488|ref|YP_516975.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense Y51] gi|219666815|ref|YP_002457250.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense DCB-2] gi|122483720|sp|Q24ZL1|RL25_DESHY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801043|sp|B8FW28|RL25_DESHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89332936|dbj|BAE82531.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537075|gb|ACL18814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfitobacterium hafniense DCB-2] Length = 179 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 11/182 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E + AV R K + +R G +P +IYG D + K ++K L ++ I Sbjct: 3 ETAIQAVER----KEKPKEVRSKGFVPGVIYGKGMDSISVKFDEKRLNKALQGRSQKAKI 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 ++ + E + Q D S IH V + V + VP+ F S + + Sbjct: 59 -SVQVAGETKQCFVGEIQKDITSGKTIHISMQVVEDDQVVKMKVPITF---GGSEALSER 114 Query: 125 GKLNVVCH--EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 KL V+ + E+ L P+ +IP+ + VD+ D +GD I + D + S + IA Sbjct: 115 -KLIVLPYFSELELTGPSADIPEYVAVDVADKSLGDKITVADFMVSPSVSVLDDPEKIIA 173 Query: 183 TI 184 I Sbjct: 174 AI 175 >gi|253688023|ref|YP_003017213.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646692|sp|C6DEJ2|RL25_PECCP RecName: Full=50S ribosomal protein L25 gi|251754601|gb|ACT12677.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 94 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 43/91 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R GKG++R LR G+ PAI+YG P I L + + + F T L L Sbjct: 4 IKAEVRKDQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEAKEGFYGTALIL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V V + Q L H DF++V Sbjct: 64 SIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|227548215|ref|ZP_03978264.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079689|gb|EEI17652.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] Length = 226 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 16/161 (9%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT-TILTLDI-G 70 R++ GKG+AR LR++G+IP ++Y S + + S I +N T IL LD+ G Sbjct: 13 REEFGKGAARRLRRDGRIPGVLY--ESGIENVHFSVDRIEMTALVRNDGTNAILRLDVDG 70 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 KEL+ ++ K + ++ + H D L V G VTV VPV E VV Sbjct: 71 KELLCMV-KHVDQNVLTLEIDHIDLLGVKRGEKVTVEVPVVTEGEAVDDA--------VV 121 Query: 131 CHEVSLL---CPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 E +L A NIPD I V++ +IG+ I ++ LP Sbjct: 122 LQETDVLEIEVDALNIPDEIVVNIEGKEIGEQIVASEVVLP 162 >gi|15802741|ref|NP_288768.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 EDL933] gi|15832331|ref|NP_311104.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187775726|ref|ZP_02798101.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188024890|ref|ZP_02774614.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189010144|ref|ZP_02805045.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189402686|ref|ZP_02784079.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189403055|ref|ZP_02792816.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189404570|ref|ZP_02790366.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189405210|ref|ZP_02814011.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189406271|ref|ZP_02827407.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|195935567|ref|ZP_03080949.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. EC4024] gi|208807041|ref|ZP_03249378.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208813367|ref|ZP_03254696.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208819050|ref|ZP_03259370.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209398752|ref|YP_002271599.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|217327947|ref|ZP_03444030.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254794086|ref|YP_003078923.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. TW14359] gi|261223354|ref|ZP_05937635.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK2000] gi|261259095|ref|ZP_05951628.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK966] gi|68053224|sp|Q8XE69|RL25_ECO57 RecName: Full=50S ribosomal protein L25 gi|226736313|sp|B5YWX8|RL25_ECO5E RecName: Full=50S ribosomal protein L25 gi|12516517|gb|AAG57323.1|AE005451_4 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. EDL933] gi|13362546|dbj|BAB36500.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187771079|gb|EDU34923.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188016119|gb|EDU54241.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189001900|gb|EDU70886.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189354272|gb|EDU72691.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189362864|gb|EDU81283.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189364889|gb|EDU83305.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189371388|gb|EDU89804.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189375583|gb|EDU93999.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|208726842|gb|EDZ76443.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208734644|gb|EDZ83331.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208739173|gb|EDZ86855.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209160152|gb|ACI37585.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|209765900|gb|ACI81262.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765902|gb|ACI81263.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765906|gb|ACI81265.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|217320314|gb|EEC28739.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254593486|gb|ACT72847.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. TW14359] gi|320192186|gb|EFW66831.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. EC1212] gi|326339541|gb|EGD63352.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1125] gi|326344002|gb|EGD67763.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1044] Length = 94 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNIQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|210613463|ref|ZP_03289722.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] gi|210151163|gb|EEA82171.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] Length = 194 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LRK G + I+G + P+ + ++ + L S+ +L L + + + K Sbjct: 15 AKALRKEGFVTGCIFGRELEKSIPLKMEKSEVERLLKSEGKGGRVL-LQLEGKTYDALIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK-SPGIKQGGKLNVVCHEVSLLC 138 + +P+ + DF + V + +NE+K GI Q + HE++ Sbjct: 74 EVDYNPLKGFVEEIDFQALVSSEKVHSSAEIHLLNESKLVAGIPQQ-----MLHEINYKA 128 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIATIVAP 187 ++ + I +D+ DLKIGD+I ++D+ + E ++ L+ T+ T+ P Sbjct: 129 LPASLVEKIELDVGDLKIGDTIRVKDLVIAKDENIDLITDLDSTVVTVTEP 179 >gi|271500913|ref|YP_003333938.1| 50S ribosomal protein L25-like protein [Dickeya dadantii Ech586] gi|270344468|gb|ACZ77233.1| Ribosomal protein L25-like protein [Dickeya dadantii Ech586] Length = 95 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 7/95 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN----FMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L +N + Sbjct: 4 INAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELD-HDIVKNLEDRNSEGLYGEI 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +L +D GKE I + Q P L H DF++V Sbjct: 63 VLVID-GKETKAKI-QAVQRHPFKPKLTHIDFVRV 95 >gi|253579435|ref|ZP_04856705.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849533|gb|EES77493.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 198 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 6/150 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G M P+ + + K L + N + I+ LD+ + V+ K Sbjct: 15 AKRLRREGYVTGNVFGREMEGSLPVKIEKSAVEKLLKTNNKGSQIM-LDVDGQSYDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + Q +P+ + DF + V + +N +K + G L E+S Sbjct: 74 EIQFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVNHDKL----EAGVLQQHLEEISFRAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + + D I VD+ D+K+GD I ++D+ + + Sbjct: 130 PSALVDKIMVDVGDMKVGDVIKVKDLAIAQ 159 >gi|218133333|ref|ZP_03462137.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] gi|217992206|gb|EEC58210.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] Length = 198 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 8/147 (5%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G +++ P+ + D+ +R+ + + + LD+ E V+ K Sbjct: 15 AKRLRREGFVTGNVFGRELAESIPVKMQKVDV-ERMMKTDHKGSQIMLDVDGEQYDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK-SPGIKQGGKLNVVCHEVSLLC 138 D +P+ I+ F + V V +N +K + G+ Q + +EVS Sbjct: 74 DIAFNPLKGIVEEISFQALVSNEMVHSVAEVILVNHDKVAEGVVQQ-----LLNEVSYKA 128 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDI 165 + I DS+ VD++ +KIGD+I ++D+ Sbjct: 129 YPSAIVDSVKVDVSQMKIGDTIRVKDL 155 >gi|260598644|ref|YP_003211215.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] gi|260217821|emb|CBA32311.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] Length = 94 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 44/91 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRHANKFPAIIYGGTEAPVAIELDHDKLMNMQAKPEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V V + Q P L H DF++ Sbjct: 64 AIDGKEVKVKVQAVQRHPYKPKLQHIDFVRA 94 >gi|156933239|ref|YP_001437155.1| 50S ribosomal protein L25 [Cronobacter sakazakii ATCC BAA-894] gi|166223679|sp|A7MLN0|RL25_ENTS8 RecName: Full=50S ribosomal protein L25 gi|156531493|gb|ABU76319.1| hypothetical protein ESA_01051 [Cronobacter sakazakii ATCC BAA-894] Length = 94 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAI+YG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRHANKFPAIVYGGTEAPVAIELDHDKVMNMQAKPEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V V + Q P L H DF++ Sbjct: 64 AIDGKEVKVKVQAVQRHPYKPKLHHIDFVR 93 >gi|15605861|ref|NP_213238.1| general stress protein Ctc [Aquifex aeolicus VF5] gi|68051943|sp|O66678|CTC_AQUAE RecName: Full=General stress protein ctc gi|2983034|gb|AAC06644.1| general stress protein Ctc [Aquifex aeolicus VF5] Length = 151 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 KD Q + + IH D +S + V VP+ F+ G++ GG V H +++ Sbjct: 23 KDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVG--TPAGVEAGGTFEPVMHTLTIKA 80 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 P IP+ I VD++ L +G+++H+ DI PE + T+A + Sbjct: 81 PPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDNPEETVAVV 126 >gi|219112565|ref|XP_002178034.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410919|gb|EEC50848.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 278 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 33/189 (17%) Query: 8 LSAVMRD---KVGKGSARLLRKNGQIPAIIYGNMSDPK----------------PIALSA 48 + +RD + G + R LR IP I G SDP P A+ Sbjct: 54 MQTYLRDVETEEGSRACRRLRWKNMIPGTIRG--SDPNLGIFSKQPESEIYVKTPWAVLQ 111 Query: 49 KDISKRLYSKNFMTTILTLDI--GKELV-----HVIPKDYQLDPVSDILIHADFLQVSEG 101 +++ + Y ++F + + + + G E V+P++ Q PV+ + A+F + G Sbjct: 112 RELDR--YHRDFESRVYDITVLDGPEDTEGTTHRVLPQNLQRHPVNSTIYCANFCRYHPG 169 Query: 102 STVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN-NIPDSITVDLNDLKIGDSI 160 + PV FIN +SP +K+ G + + + +IP+S+ ++ + L+ D I Sbjct: 170 RPIKF--PVSFINTEESPALKRDGFIIPIQRSIECFVEDGVDIPESLDMECSGLQFKDVI 227 Query: 161 HMEDIRLPE 169 + I LP+ Sbjct: 228 RTDRIILPD 236 >gi|82544597|ref|YP_408544.1| 50S ribosomal protein L25 [Shigella boydii Sb227] gi|109893394|sp|Q31YZ2|RL25_SHIBS RecName: Full=50S ribosomal protein L25 gi|81246008|gb|ABB66716.1| 50S ribosomal subunit protein L25 [Shigella boydii Sb227] gi|332093581|gb|EGI98639.1| ribosomal L25p family protein [Shigella boydii 3594-74] Length = 94 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +L + Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLAI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V +D Q P L H DF++ Sbjct: 64 VVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|317492527|ref|ZP_07950955.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919519|gb|EFV40850.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 94 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG++R LR +G+ PAI+YG +P + + + F ++ L Sbjct: 4 IEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQVIAL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V + Q P L H DF++ Sbjct: 64 MIDGKETKVKVQAVQRHPFKRKLTHVDFVRA 94 >gi|261340617|ref|ZP_05968475.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] gi|288317028|gb|EFC55966.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] Length = 94 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ GKG++R LR + PAI+YG + P I L + F + +LT+ Sbjct: 4 IEAEVRNVQGKGASRRLRNANKFPAIVYGGEAAPVAIELDHDKVWNMQTKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +G + V + Q P L H DF++ Sbjct: 64 VVGGKEEKVKVQAVQRHPFKPKLSHIDFVR 93 >gi|166033562|ref|ZP_02236391.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] gi|166026747|gb|EDR45504.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] Length = 193 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 6/150 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G M + P+ + A + + L + N + I+ LDI E +V+ K Sbjct: 15 AKKLRREGYVTGNVFGKEMKESIPVKMDAAAVDRLLKTSNKGSQIM-LDIDGESHNVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + +P+ + DF + + V + +N +K + G L EVS Sbjct: 74 EVDYNPLKGRVDEMDFQALVKDEVVHSVAEIVLVNHDKL----ESGVLQQQLEEVSYKAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + + D + +D+ L+IGD+I ++D+ L + Sbjct: 130 PSALVDKVEIDVAKLRIGDTIKVKDLSLAQ 159 >gi|146312423|ref|YP_001177497.1| 50S ribosomal protein L25P [Enterobacter sp. 638] gi|166987893|sp|A4WCL6|RL25_ENT38 RecName: Full=50S ribosomal protein L25 gi|145319299|gb|ABP61446.1| LSU ribosomal protein L25P [Enterobacter sp. 638] Length = 94 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R GKG++R LR + PAIIYG + P I + + + + F T +LT+ Sbjct: 4 INAEVRAVQGKGASRRLRAANKFPAIIYGGEAAPVAIEMDQDKVWNQQTKEGFYTEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q P L H DF++ Sbjct: 64 VIDGKEEKVKVQAVQRHPFKPKLSHVDFVR 93 >gi|227494886|ref|ZP_03925202.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831338|gb|EEH63721.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 97 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A +R GKG AR R G++PA++YG P + L ++ + + T + Sbjct: 6 RLEATVRTDFGKGFARRSRMAGKVPAVVYGPNLAPVHVELPGHEVFMIVKNNRQATLSIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 D GKE + VI KD Q PV ++H D + V Sbjct: 66 FD-GKEQLAVI-KDVQRHPVRRDILHVDLVAVE 96 >gi|237732238|ref|ZP_04562719.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] gi|226907777|gb|EEH93695.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] Length = 94 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q P L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHPFKPKLSHIDFVR 93 >gi|294637091|ref|ZP_06715405.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] gi|291089719|gb|EFE22280.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R++ GKG++R LR G+ PAI+YG D I L F +LTL Sbjct: 4 INAEVRNEQGKGASRRLRSAGKFPAIVYGGKEDALTITLDHDSTMNMSEKDGFYGEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + V + Q P L H DF++ Sbjct: 64 VVDGKEIKVKVQAVQRHPYKPKLSHIDFVRA 94 >gi|187933675|ref|YP_001886412.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187721828|gb|ACD23049.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 182 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/178 (20%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+ + ++ K + + LR+ G IP +I+G + + P+ + + +K + + N +I+T Sbjct: 4 LTFKVYERSVKENKKALRRTGLIPCVIFGEFLKESIPVKMPTGEFNKMITNNN-SGSIIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + ++ + K+ Q S IL H F V + + +P+++I + + Sbjct: 63 LNLNDKKINCVVKEIQKLSPSKIL-HVSFQSVKPNEKIKMRIPIKYIGQENLET--KRLL 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + IP+ + V+++++ D + +ED+ +P+ M+ +A I Sbjct: 120 LETFTPFIDFQGDVEKIPEFLEVNVSEMSCEDKLFVEDVTVPDDVLVMTDPKTLLAVI 177 >gi|57235101|ref|YP_182157.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides ethenogenes 195] gi|109893358|sp|Q3Z6J2|RL25_DEHE1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57225549|gb|AAW40606.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides ethenogenes 195] Length = 218 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 13/170 (7%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSA-----KDISKRLYSKNFMTTILTLDIGKELVHV 76 + LR G P I+G+ K +AL A + R S + ++ L LD K+ Sbjct: 19 KFLRAQGITPVHIFGH--GLKSLALQANTQELESTISRAGSSHLVS--LKLDTDKKTRKA 74 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVS 135 ++ Q PV L H DF Q++ VT +P+ F E SP +K+ G KL ++ Sbjct: 75 FIREIQRHPVKGYLQHVDFYQINLKEKVTAEIPIHFSGE--SPLLKEKGHKLTAPFTHLT 132 Query: 136 LLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNITIATI 184 + +++P I ++L+ + ++++DI LP +++ ++ +A + Sbjct: 133 VEALPDDLPPEIHIELSQFDSPEKDLYIKDIVLPGNARILNEPDLLVAKV 182 >gi|307130683|ref|YP_003882699.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] gi|306528212|gb|ADM98142.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] Length = 95 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN----FMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L +N + Sbjct: 4 INAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELD-HDIVKNLEDRNSEGLYGEI 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L +D GKE V + Q P L H DF++V Sbjct: 63 ALVVD-GKE-TKVKIQAVQRHPFKPKLTHIDFVRV 95 >gi|269139661|ref|YP_003296362.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|267985322|gb|ACY85151.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|304559531|gb|ADM42195.1| LSU ribosomal protein L25p [Edwardsiella tarda FL6-60] Length = 94 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-FMTTILT 66 ++A +R++ GKG++R LR G+ PAI+YG + L D + + K+ F T ILT Sbjct: 4 INAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLD-HDTTMNMSEKDGFYTDILT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + + V + Q P + H DF++ Sbjct: 63 LSVDGKEIKVKIQAVQRHPYKPKITHIDFVRA 94 >gi|73749132|ref|YP_308371.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. CBDB1] gi|147669894|ref|YP_001214712.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. BAV1] gi|289433106|ref|YP_003462979.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] gi|109893359|sp|Q3ZYZ2|RL25_DEHSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042353|sp|A5FPN6|RL25_DEHSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|73660848|emb|CAI83455.1| ribosomal protein L25 (General stress protein Ctc) [Dehalococcoides sp. CBDB1] gi|146270842|gb|ABQ17834.1| LSU ribosomal protein L25P [Dehalococcoides sp. BAV1] gi|288946826|gb|ADC74523.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] Length = 218 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 11/169 (6%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDIS-----KRLYSKNFMTTILTLDIGKELVHV 76 +L+R G P I+G+ K +AL A + R S + + + LD K+ V Sbjct: 19 KLIRAQGLTPVHIFGH--GLKSLALQADTLELESTINRAGSSHLVN--IKLDTDKKTRKV 74 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 ++ Q +P+ L H DF Q++ VT +P+ F E+ S ++G KL +++ Sbjct: 75 FIREIQRNPIKGYLEHVDFYQINLKEKVTAEIPIHFSGES-SLLKEKGHKLIAPFTHLTV 133 Query: 137 LCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++P I +DL+ + ++++DI LP +++ ++ +A + Sbjct: 134 EALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGGAKILNEADLLVAKV 182 >gi|223944153|gb|ACN26160.1| unknown [Zea mays] Length = 192 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 17/132 (12%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNMS-----DPKPIALSAKDISK---RLYSKNFM 61 AV R G+ A RK G++PAI++ + + + I++ A I K L F+ Sbjct: 60 AVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFL 119 Query: 62 TTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 + + +L + E V V+P+ L +D ++ F++ + + + VP+ F Sbjct: 120 SRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMF 179 Query: 113 INENKSPGIKQG 124 I E+ SPG+++G Sbjct: 180 IGEDASPGLRKG 191 >gi|50121669|ref|YP_050836.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] gi|68053132|sp|Q6D3J9|RL25_ERWCT RecName: Full=50S ribosomal protein L25 gi|49612195|emb|CAG75645.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] Length = 94 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG++R LR G+ PAI+YG P I L + + + F L L Sbjct: 4 IKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETLIL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V V + Q L H DF++V Sbjct: 64 SIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|320539362|ref|ZP_08039031.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] gi|320030487|gb|EFW12497.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] Length = 94 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAI+YG P I L + F + +TL Sbjct: 4 INAQVRKEQGKGASRRLRAANKFPAIVYGGEEAPVSIELGQDYVKNMAVKPEFYSKTITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + +V + Q P L H DF++V Sbjct: 64 VIDGKETNVKVQAIQRHPFKPKLTHIDFVRV 94 >gi|288871671|ref|ZP_06118530.2| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] gi|288862497|gb|EFC94795.1| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] Length = 212 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G ++ + P+ + + + L + N + IL LD+ + V+ K Sbjct: 29 AKRLRREGYVTGNVFGRDIQESIPVKIERTVVERLLKTCNKGSQIL-LDVDGQAYDVLIK 87 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D + + I+ DF + G V V +N +K G L E+S Sbjct: 88 DISFNAMKGIVEEIDFQALVRGEKVHSVAEVILVNHDKV----MNGVLQQQLQEISYKAL 143 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 + D + +D+ D+K+GD+I + D+ Sbjct: 144 PEALIDKVRIDVGDMKVGDTIRVADL 169 >gi|212712413|ref|ZP_03320541.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] gi|212685159|gb|EEB44687.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] Length = 93 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ +I + SK +LTL Sbjct: 4 INAIERKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEIINQ-ESKAEFYEVLTL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q P + H DFL+ Sbjct: 63 VIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|237808487|ref|YP_002892927.1| 50S ribosomal protein L25 [Tolumonas auensis DSM 9187] gi|259646697|sp|C4LFH4|RL25_TOLAT RecName: Full=50S ribosomal protein L25 gi|237500748|gb|ACQ93341.1| ribosomal protein L25 [Tolumonas auensis DSM 9187] Length = 95 Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 44/86 (51%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R +GKG++R LR+ Q+PAI+YG + + L + F + +LTL + Sbjct: 9 VRADLGKGASRRLRRAEQVPAILYGAGQEAVSLVLDHNKVITAQQEAAFYSEVLTLVVDG 68 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQ 97 + V V Q PV ++H DF++ Sbjct: 69 KEVKVKVAAVQRHPVKPKVVHLDFIR 94 >gi|308049140|ref|YP_003912706.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307631330|gb|ADN75632.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 95 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R GKG++R LR G IPAIIYG ++P I L I F T LT+ Sbjct: 5 FEAKVRTDAGKGASRRLRHAGLIPAIIYGGNAEPVSIELDHDKILHAQDEDAFYTAELTI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + V + Q P + H DF +V Sbjct: 65 VVDGKEEKVKAQAMQRHPYKPKVTHIDFKRV 95 >gi|238920497|ref|YP_002934012.1| hypothetical protein NT01EI_2608 [Edwardsiella ictaluri 93-146] gi|259646686|sp|C5BG54|RL25_EDWI9 RecName: Full=50S ribosomal protein L25 gi|238870066|gb|ACR69777.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 94 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-FMTTILT 66 ++A +R++ GKG++R LR G+ PAI+YG + L D + L K+ F T +LT Sbjct: 4 INAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLD-HDSTMNLSEKDGFYTDVLT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + + V + Q P + H DF++ Sbjct: 63 LSVDGKEIKVKIQAVQRHPYKPKITHIDFVRA 94 >gi|68074885|ref|XP_679359.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500086|emb|CAH94997.1| conserved hypothetical protein [Plasmodium berghei] Length = 284 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 21/162 (12%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELVHV 76 L + G IPAII+ + K I ++ K+I + + + F + + IG E+V Sbjct: 69 LLQXGYIPAIIWK-YGEEKRICINHKEIDEYAFEEEDGHLSLLFSARLFKIHIGDEVVEC 127 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + + DPV + F +V+E V++P + SP G + + + + Sbjct: 128 VVSHVETDPVEKHIYFLKFARVAENEITQVNIPCSIVGLIGSPAYINGYHVQLALNYIKC 187 Query: 137 LCPANNIPDSITVDL---------NDLKIGDSIHMEDIRLPE 169 NNIP +D+ N +K+ + +H+ LPE Sbjct: 188 NVLGNNIPPPFQIDVSKLSYKEPYNSIKLRELMHL----LPE 225 >gi|168466077|ref|ZP_02699947.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631317|gb|EDX49877.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 94 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPVAIELDHDQVMNMQAKAEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|161502616|ref|YP_001569728.1| 50S ribosomal protein L25 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189042368|sp|A9MK27|RL25_SALAR RecName: Full=50S ribosomal protein L25 gi|160863963|gb|ABX20586.1| hypothetical protein SARI_00663 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 94 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDKVMNMQAKAEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAFKPKLTHIDFIR 93 >gi|227112089|ref|ZP_03825745.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227325904|ref|ZP_03829928.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 94 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM--TTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + + F T IL Sbjct: 4 IKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETVIL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++D GKE V V + Q L H DF++V Sbjct: 64 SID-GKE-VKVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|261821188|ref|YP_003259294.1| 50S ribosomal protein L25 [Pectobacterium wasabiae WPP163] gi|261605201|gb|ACX87687.1| Ribosomal protein L25-like protein [Pectobacterium wasabiae WPP163] Length = 94 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 40/91 (43%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG++R LR G+ PAI+YG P I L + + F L L Sbjct: 4 IKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKDGFYGETLIL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V V + Q L H DF++V Sbjct: 64 SIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|268591197|ref|ZP_06125418.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] gi|291313428|gb|EFE53881.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] Length = 93 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ R + GKG++R LR++ Q+PAI+YG + + L+ +I + SK +L L Sbjct: 4 INAIERKEQGKGASRRLRRDNQLPAIVYGGNQEAISVTLNHDEIINQ-ESKAEFYEVLNL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q P + H DFL+ Sbjct: 63 VIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|16761165|ref|NP_456782.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765553|ref|NP_461168.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141140|ref|NP_804482.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412863|ref|YP_149938.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180811|ref|YP_217228.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613068|ref|YP_001587033.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551198|ref|ZP_02344953.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992549|ref|ZP_02573646.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229596|ref|ZP_02654654.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236413|ref|ZP_02661471.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242330|ref|ZP_02667262.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261757|ref|ZP_02683730.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818045|ref|ZP_02830045.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442256|ref|YP_002041499.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451948|ref|YP_002046279.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471162|ref|ZP_03077146.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735960|ref|YP_002115314.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251433|ref|YP_002147197.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262341|ref|ZP_03162415.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361794|ref|YP_002141430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245069|ref|YP_002216308.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387863|ref|ZP_03214475.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929202|ref|ZP_03220345.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857658|ref|YP_002244309.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213416568|ref|ZP_03349712.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424220|ref|ZP_03357079.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581647|ref|ZP_03363473.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612604|ref|ZP_03370430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646824|ref|ZP_03376877.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213851900|ref|ZP_03381432.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583278|ref|YP_002637076.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913794|ref|ZP_04657631.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824601|ref|ZP_06544144.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|68053011|sp|Q57MB4|RL25_SALCH RecName: Full=50S ribosomal protein L25 gi|68053042|sp|Q5PE20|RL25_SALPA RecName: Full=50S ribosomal protein L25 gi|68053181|sp|Q7CQ71|RL25_SALTY RecName: Full=50S ribosomal protein L25 gi|68053225|sp|Q8XFE7|RL25_SALTI RecName: Full=50S ribosomal protein L25 gi|189042369|sp|A9N6F6|RL25_SALPB RecName: Full=50S ribosomal protein L25 gi|226736359|sp|B5EYS6|RL25_SALA4 RecName: Full=50S ribosomal protein L25 gi|226736360|sp|B5FNN0|RL25_SALDC RecName: Full=50S ribosomal protein L25 gi|226736361|sp|B5R194|RL25_SALEP RecName: Full=50S ribosomal protein L25 gi|226736363|sp|B4TAP8|RL25_SALHS RecName: Full=50S ribosomal protein L25 gi|226736364|sp|B4SYR0|RL25_SALNS RecName: Full=50S ribosomal protein L25 gi|226736365|sp|B5BE12|RL25_SALPK RecName: Full=50S ribosomal protein L25 gi|226736366|sp|B4TPC7|RL25_SALSV RecName: Full=50S ribosomal protein L25 gi|254801060|sp|C0Q0R6|RL25_SALPC RecName: Full=50S ribosomal protein L25 gi|25295452|pir||AI0785 50s ribosomal protein L25 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420762|gb|AAL21127.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503463|emb|CAD02607.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi] gi|29136766|gb|AAO68331.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127120|gb|AAV76626.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128444|gb|AAX66147.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362432|gb|ABX66200.1| hypothetical protein SPAB_00776 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400919|gb|ACF61141.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410252|gb|ACF70471.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457526|gb|EDX46365.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711462|gb|ACF90683.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197093270|emb|CAR58716.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215136|gb|ACH52533.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240596|gb|EDY23216.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290557|gb|EDY29912.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939585|gb|ACH76918.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604961|gb|EDZ03506.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321746|gb|EDZ06945.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323963|gb|EDZ11802.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329203|gb|EDZ15967.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335818|gb|EDZ22582.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338300|gb|EDZ25064.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345061|gb|EDZ31825.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349319|gb|EDZ35950.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709461|emb|CAR33802.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467805|gb|ACN45635.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247436|emb|CBG25261.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994306|gb|ACY89191.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158785|emb|CBW18297.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913214|dbj|BAJ37188.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086668|emb|CBY96439.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224880|gb|EFX49943.1| LSU ribosomal protein L25p [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615251|gb|EFY12173.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617841|gb|EFY14737.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624564|gb|EFY21395.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626985|gb|EFY23781.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634170|gb|EFY30906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635637|gb|EFY32347.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640227|gb|EFY36891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646350|gb|EFY42862.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649317|gb|EFY45753.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656437|gb|EFY52726.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660680|gb|EFY56915.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665697|gb|EFY61881.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667223|gb|EFY63390.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671228|gb|EFY67356.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675131|gb|EFY71208.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680739|gb|EFY76774.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686914|gb|EFY82891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715288|gb|EFZ06859.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130554|gb|ADX17984.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192679|gb|EFZ77906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198889|gb|EFZ83988.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205100|gb|EFZ90078.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208143|gb|EFZ93087.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211196|gb|EFZ96042.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215831|gb|EGA00574.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221862|gb|EGA06262.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223802|gb|EGA08105.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231277|gb|EGA15392.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233710|gb|EGA17802.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237782|gb|EGA21842.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245763|gb|EGA29757.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246497|gb|EGA30476.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252604|gb|EGA36443.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255328|gb|EGA39101.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259563|gb|EGA43198.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266060|gb|EGA49553.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272754|gb|EGA56158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624059|gb|EGE30404.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989158|gb|AEF08141.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 94 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|317048878|ref|YP_004116526.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] gi|316950495|gb|ADU69970.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] Length = 94 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 43/91 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R + GKG++R LR + PAI+YG P I L I + F + +LT+ Sbjct: 4 INAEARKEQGKGASRRLRHANKFPAIVYGGTEAPVSIELDHDSIMNMQAKEGFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + V + Q P L H DF++ Sbjct: 64 VVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|205353357|ref|YP_002227158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226736362|sp|B5RC63|RL25_SALG2 RecName: Full=50S ribosomal protein L25 gi|205273138|emb|CAR38095.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628446|gb|EGE34789.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 94 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRTANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|302844117|ref|XP_002953599.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] gi|300261008|gb|EFJ45223.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] Length = 299 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 19/174 (10%) Query: 8 LSAVMRDK---VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK------ 58 L A +RD + + + + LR++G++P ++ M P P +++ Sbjct: 114 LEAHVRDPEHGMARCAVKWLRRSGRVPGQVHSLMGSPGPGGRGVWELNVHFDETSLARMC 173 Query: 59 NFMTTILTL-DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +F T+ +L G ++ + + +L+ + I D V V VPVR +N+ Sbjct: 174 HFPRTVPSLRGHGSDIANT--QHPRLEGIEMIYCPVD-------RVVLVDVPVRLVNDEM 224 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 +PG+++GG + ++ V N IP I V++ L + + + D+ +P T Sbjct: 225 APGVRKGGWMCMLKRTVRYKALGNAIPPYIEVNVRHLDLEQDLLVRDLPIPPGT 278 >gi|183599528|ref|ZP_02961021.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] gi|188021775|gb|EDU59815.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] Length = 93 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ ++ + F +L+L Sbjct: 4 INAIARKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEVINQEGKAEFY-EVLSL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I + V + Q P + H DFL+V Sbjct: 63 VIDGKETKVKVQAIQRHPFKPKVTHIDFLRV 93 >gi|187932531|ref|YP_001886413.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187720684|gb|ACD21905.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 181 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 7/164 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 +S + ++ K S LRK G IP II+G +++ P+ + ++ R+ N +I+T Sbjct: 4 VSFKVYERNTKESKNKLRKTGLIPGIIFGEFLTESIPVKMCNAELH-RMIRNNNSGSIIT 62 Query: 67 LDIGKELVHVIPKDYQ-LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + + + K+ Q L P ++H F V + + +P+++I + + Sbjct: 63 LDLEDKKFNCVVKEIQKLSPRE--ILHVSFQSVKPNEKIKMRIPIKYIGQENLET--KRL 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + IP+ + V+++ + D + +EDI +P+ Sbjct: 119 VLETFTPFLDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPK 162 >gi|325119762|emb|CBZ55315.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 183 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + L IGK + IP Q DPV+ L F + EG V +P + P Sbjct: 11 FQARLFRLRIGKWIEECIPTFVQADPVARRLYFVKFERHVEGKISEVDIPTTMVGLLACP 70 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSM 174 ++G + +V + C +IP VD++ L +I ++D++ LP S+ Sbjct: 71 AYQRGYHVELVMPTIRCQCVGADIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPSDGSAR 130 Query: 175 SQLNITIAT 183 + +AT Sbjct: 131 FHPSYNVAT 139 >gi|188589956|ref|YP_001921406.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|251780872|ref|ZP_04823792.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500237|gb|ACD53373.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] gi|243085187|gb|EES51077.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 181 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 7/164 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 +S + ++ K S LRK G IP II+G + + P+ + ++ R+ N +I+T Sbjct: 4 VSFKVYERNTKESKNKLRKAGLIPGIIFGEFLKESIPVKMCNAELH-RMIRNNNSGSIIT 62 Query: 67 LDIGKELVHVIPKDYQ-LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + + + K+ Q L P ++H F V + + +P+++I + + Sbjct: 63 LDLEDKKFNCVVKEIQKLSPRE--ILHVSFQSVKANEKIKMRIPIKYIGQENLET--KRL 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 L + IP+ + V+++ + D + +EDI +P+ Sbjct: 119 VLETFTPFIDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPK 162 >gi|37526759|ref|NP_930103.1| 50S ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] gi|68053195|sp|Q7N352|RL25_PHOLL RecName: Full=50S ribosomal protein L25 gi|36786191|emb|CAE15243.1| ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 94 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR+ + PAI+YG + I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRRANKFPAIVYGGNQELVSIELDHDQVINMEQKAEFYSDVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q P L H DFL+ Sbjct: 64 VIDGKETKVKVQAVQRHPFKPKLAHIDFLR 93 >gi|157144862|ref|YP_001452180.1| 50S ribosomal protein L25 [Citrobacter koseri ATCC BAA-895] gi|166223675|sp|A8AE31|RL25_CITK8 RecName: Full=50S ribosomal protein L25 gi|157082067|gb|ABV11745.1| hypothetical protein CKO_00591 [Citrobacter koseri ATCC BAA-895] Length = 94 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDQVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|326792991|ref|YP_004310812.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] gi|326543755|gb|ADZ85614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] Length = 181 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 7/146 (4%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSA-KDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+NG IP++IYG S P+ + + K+ +K+L + + +++ +L+ V K Sbjct: 15 AKQLRRNGIIPSVIYGG-SLPESLLVQIDKNAAKKLLRCKREGSKMEIELDSKLIPVQIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 D + V++ ++H F + V + N +K G+ L + EV Sbjct: 74 DIDSNIVNNEILHISFQALEADKRVNSKAQIILENTDKVVGV-----LEQLLFEVPYSAL 128 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 +++ D++ VDL L +G + +EDI Sbjct: 129 PSDMIDTVVVDLEGLAVGKVLTLEDI 154 >gi|150015868|ref|YP_001308122.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] gi|149902333|gb|ABR33166.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] Length = 189 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 7/180 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R K AR +R+ G+IP +IYG + + + K S + I+ Sbjct: 3 ELNLTKRIKTASHGARKVRREGKIPGVIYGKEIGNEIFTVDESALLKE-TSASGEHGIVK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + + K+ Q + + + IH DF +V+ T+ V ++ + GI + Sbjct: 62 FNLDGRKGNAVIKEIQRNALGNKAIHVDFEEVAANDTMHTEVLIKIV----GKGILESKG 117 Query: 127 LNVVCHE--VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + V + C A ++P + +D+++ + G ++++ E + L+ I +I Sbjct: 118 LILQTQRDLVKVSCKAKDLPKDVELDVSNGQAGTVYTFKNLKFAEGIEVLDDLSTVIGSI 177 >gi|300724001|ref|YP_003713315.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] gi|297630532|emb|CBJ91197.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] Length = 93 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR+ + PAIIYG +P I L + F + + Sbjct: 4 INATVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHENKPEFYEVMTLV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 GKE V + Q P L H DFL+ Sbjct: 64 VDGKE-TKVKVQAVQRHPFKPKLTHIDFLR 92 >gi|322832031|ref|YP_004212058.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] gi|321167232|gb|ADW72931.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] Length = 96 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 +D+ GKG++R LR + PAI+YG + P I L + F + +TL I + Sbjct: 11 QDEQGKGASRRLRTANKFPAIVYGGSAAPVSIKLDHDSVKNLEVKAEFYSEAITLVIDGK 70 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQV 98 V + Q P L H DF++V Sbjct: 71 ETKVKVQAVQRHPFKPKLAHIDFVRV 96 >gi|226330603|ref|ZP_03806121.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] gi|225201398|gb|EEG83752.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] Length = 94 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + + L Sbjct: 4 INATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYSDFVNL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V K Q + H DFL+ Sbjct: 64 VIDGKETKVKVKAVQRHEYKPKITHIDFLR 93 >gi|33519924|ref|NP_878756.1| 50S ribosomal protein L25 [Candidatus Blochmannia floridanus] gi|71153130|sp|Q7VRX2|RL25_BLOFL RecName: Full=50S ribosomal protein L25 gi|33504270|emb|CAD83162.1| 50s ribosomal protein L25 [Candidatus Blochmannia floridanus] Length = 103 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 9/101 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISK----RLYSKNFMT 62 + A++R ++ K R +RKNG PA+IY P + LS KD+S + KN Sbjct: 4 IKAILRTEIKKSITRKIRKNGGCPAVIYNKNKSPNINVQLSNKDLSHPENVHYFLKNNKV 63 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGS 102 IL I E + +D Q P +IH DF+ ++ S Sbjct: 64 QIL---INNEFTITAKIQDVQYHPYKSNIIHIDFIHITTQS 101 >gi|197301913|ref|ZP_03166977.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] gi|197298981|gb|EDY33517.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] Length = 199 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 10/168 (5%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + I+G M + P+ + D+ K L +N ++ L++ + + K Sbjct: 15 AKKLRREGFVTGCIFGREMKESIPLKMEKADVEKLLKVENKGGQVM-LEVDGQTYDALIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK-SPGIKQGGKLNVVCHEVSLLC 138 + +P+ + DF + V + +N +K + G+ Q + E+S Sbjct: 74 EVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLDKLAAGVPQQ-----MLQEISFKA 128 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQLNITIATI 184 + + + VD+ DLK+GD+I + D+ + + M+ ++ T+ TI Sbjct: 129 LPAALVEKVEVDVGDLKVGDTIRVADLPIAKDKDVDLMTDVDATVVTI 176 >gi|197284710|ref|YP_002150582.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] gi|226736351|sp|B4ET93|RL25_PROMH RecName: Full=50S ribosomal protein L25 gi|194682197|emb|CAR41879.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] Length = 94 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + L Sbjct: 4 INATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYADFVNL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V K Q + H DFL+ Sbjct: 64 VIDGKATKVKVKAVQRHEYKPKITHIDFLR 93 >gi|251790040|ref|YP_003004761.1| 50S ribosomal protein L25 [Dickeya zeae Ech1591] gi|247538661|gb|ACT07282.1| ribosomal protein L25 [Dickeya zeae Ech1591] Length = 95 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN----FMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L +N + Sbjct: 4 INAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELD-HDIVKNLEDRNSEGLYGEI 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +L +D GKE V + Q L H DF++V Sbjct: 63 VLVID-GKE-TKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|283785997|ref|YP_003365862.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] gi|282949451|emb|CBG89064.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] Length = 94 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPIAIELDHDQVMNMQVKPEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|330887870|gb|EGH20531.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 71 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + + Sbjct: 3 EFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSH 62 Query: 64 ILTLDIGKE 72 I+ L++G + Sbjct: 63 IIELNVGGQ 71 >gi|283832377|ref|ZP_06352118.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] gi|291072027|gb|EFE10136.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] Length = 94 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V V + Q L H DF++ Sbjct: 64 VVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|296103843|ref|YP_003613989.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058302|gb|ADF63040.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 94 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ GKG++R LR + PAI+YG + P I L + F + +LT+ Sbjct: 4 IEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVSIELDHDKVWNMQTKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +G + V + Q L H DF++ Sbjct: 64 VVGGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|227357714|ref|ZP_03842063.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] gi|227162043|gb|EEI47057.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] Length = 104 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F Sbjct: 9 KKMLTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYA 68 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + L I + V K Q + H DFL+ Sbjct: 69 DFVNLVIDGKATKVKVKAVQRHEYKPKITHIDFLR 103 >gi|289804879|ref|ZP_06535508.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 87 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R + GKG++R LR + PAIIYG P I L + F + +LTL + Sbjct: 1 VRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDG 60 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQ 97 + V V + Q L H DF++ Sbjct: 61 KEVKVKAQAVQRHAYKPKLTHIDFVR 86 >gi|308187560|ref|YP_003931691.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] gi|308058070|gb|ADO10242.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] Length = 94 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R + GKG++R LR + PAIIYG I L + F +LTL Sbjct: 4 INAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQAKPGFYDEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + V + Q P L H DF++ Sbjct: 64 SVDGKETKVKVQAVQRHPFKPKLFHIDFVRA 94 >gi|304397508|ref|ZP_07379386.1| Ribosomal protein L25-like protein [Pantoea sp. aB] gi|304355126|gb|EFM19495.1| Ribosomal protein L25-like protein [Pantoea sp. aB] Length = 94 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R + GKG++R LR + PAIIYG I L + F +LTL Sbjct: 4 INAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQSKPGFYDEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + V + Q P L H DF++ Sbjct: 64 SVDGKETKVKVQAVQRHPFKPKLFHIDFVRA 94 >gi|261346081|ref|ZP_05973725.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] gi|282565733|gb|EFB71268.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] Length = 93 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A+ R + GKG++R LR+ Q+PA++YG + + L+ +I + SK IL L Sbjct: 4 INAIERKEQGKGASRRLRRANQLPAVVYGGNQEAISVTLNHDEIINQ-ESKAGFYDILNL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q P + H DFL+ Sbjct: 63 VIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|291546340|emb|CBL19448.1| ribosomal protein L25, Ctc-form [Ruminococcus sp. SR1/5] Length = 195 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 14/155 (9%) Query: 20 SARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 A+ LR+ G + I+ G M +P + + +K + + N T + LDI E V + Sbjct: 14 KAKKLRREGYVTGILSGKEMKEPVALQFDGAEAAKFIKA-NKEGTQIYLDIEGEKVDALV 72 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 K+ +P+ L+ DF + G V+ V V+ + + GI + E+ Sbjct: 73 KNIDYNPIEKQLMALDFQALVAGEKVSTTVAVKLEHTDMVQGI-----VEQEMEEIHYKA 127 Query: 139 PANNIPDSITVDLN----DLKIGDSIHMEDIRLPE 169 N+ D+I +D N D++ IH++D+ +PE Sbjct: 128 DPANLLDTIVIDFNGYPADVR---DIHVKDLPIPE 159 >gi|290475893|ref|YP_003468786.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] gi|289175219|emb|CBJ82022.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] Length = 93 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR+ + PAIIYG +P I L + F + + Sbjct: 4 INAEVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHESKPEFYEVLNLV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 GKE V + Q P L H DFL+ Sbjct: 64 VDGKETT-VKVQAVQRHPFKPKLTHIDFLR 92 >gi|182417185|ref|ZP_02625555.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667957|ref|ZP_04527941.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379027|gb|EDT76533.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237656305|gb|EEP53861.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 190 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 9/170 (5%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIP 78 SAR R+ G IP +IYG + D+ + L + + +L D GK+ VI Sbjct: 16 SARKERRKGAIPGVIYGKEIGNVLFDVDVLDLEREL-AVSGEHGVLEFDFEGKKGTAVI- 73 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE--VSL 136 K+ Q + + +IH D +VS +T V ++ G+ + L + + V + Sbjct: 74 KELQKNHFGNKVIHMDLEEVSAKEKMTTEVSIKI----SGKGLLESKALILQVQKDLVKV 129 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 C A ++P +D+++ G ++D+++ +K L+ I +IVA Sbjct: 130 TCTAADLPKEFNLDVSEGTAGTVYTLKDLKISDKVIVDDDLSSVIGSIVA 179 >gi|127512758|ref|YP_001093955.1| ribosomal protein L25 [Shewanella loihica PV-4] gi|166223720|sp|A3QDZ8|RL25_SHELP RecName: Full=50S ribosomal protein L25 gi|126638053|gb|ABO23696.1| LSU ribosomal protein L25P [Shewanella loihica PV-4] Length = 95 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 45/88 (51%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R ++GKGS+R LR G++PA+IYG + I + I + +F + +T+ Sbjct: 5 ITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSDITI 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADF 95 + + V V + Q ++ H DF Sbjct: 65 VLDGKEVKVRVQAMQRHAFKPMIEHVDF 92 >gi|405949|gb|AAA16413.1| rplY [Escherichia coli] Length = 96 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDP 85 + + + V +D Q P Sbjct: 64 VVDGKEIKVKAQDVQRHP 81 >gi|251780174|ref|ZP_04823094.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084489|gb|EES50379.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 182 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/153 (20%), Positives = 74/153 (48%), Gaps = 5/153 (3%) Query: 18 KGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 K + + LR+ G IP +I+G + + P+ + + +K + + N +I+TL++ + ++ Sbjct: 14 KENKKGLRRTGLIPGVIFGEFLKESVPVKMPTGEFNKMITNNN-SGSIITLNLNDKKINC 72 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + K+ Q S IL H F V + + +P++++ + + L + Sbjct: 73 VVKEIQKLSPSKIL-HVSFQSVKPNEKIKMRIPIKYVGQENLETNRL--LLETFTPFIDF 129 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 IP+ + V+++ + D + +EDI +P+ Sbjct: 130 QGDVEKIPEFLEVNVSKMSCEDKLFVEDISVPD 162 >gi|153831149|ref|ZP_01983816.1| ribosomal L25p family [Vibrio cholerae 623-39] gi|148873375|gb|EDL71510.1| ribosomal L25p family [Vibrio cholerae 623-39] Length = 77 Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR G PAI+YG + P I+L+ D+ ++ F I+ + G+E V V P+D Sbjct: 1 SRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIVLVIDGQE-VKVKPQD 59 Query: 81 YQLDPVSDILIHADFLQV 98 Q + H DF+++ Sbjct: 60 VQRHAYKPKVEHMDFIRI 77 >gi|149910383|ref|ZP_01899025.1| RplY protein [Moritella sp. PE36] gi|149806531|gb|EDM66500.1| RplY protein [Moritella sp. PE36] Length = 95 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 44/90 (48%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 A +R +GKG++R LR + PA+IYG + I L ++ ++ F ++++TL Sbjct: 5 FEAQVRSDLGKGASRRLRHANKFPAVIYGKGEEAISIELEHDVVNNAQRNEEFFSSVITL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V K Q + H DF++ Sbjct: 65 VVDGTEMAVTVKAMQRHAFKPKVQHIDFIR 94 >gi|116515029|ref|YP_802658.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256883|gb|ABJ90565.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 98 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Query: 7 KLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKP--IALSAKDISKRLYSKNFMTT 63 KL A+ R+K+G ++R R + +IPAIIYG K I L I KNF + Sbjct: 3 KLQAIYRNKLGTNNSRYFRNFDKKIPAIIYGKKFLEKELFILLDHNIIFNLQKEKNFFSN 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 + + + I +D Q I++H DFL Sbjct: 63 NFLIKLKNKSFFSILQDIQFHVFKPIILHIDFL 95 >gi|238796850|ref|ZP_04640355.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] gi|238719338|gb|EEQ11149.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] Length = 94 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAI+YG IAL D +K L K F ++LTL I Sbjct: 8 VRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALD-HDTTKNLEIKPGFYDSVLTLVID 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|238784262|ref|ZP_04628274.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] gi|238714829|gb|EEQ06829.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] Length = 94 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAI+YG IAL D +K L K F ++LTL I Sbjct: 8 VRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALD-HDTTKNLELKPGFYDSVLTLVID 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|226324228|ref|ZP_03799746.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] gi|225206676|gb|EEG89030.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] Length = 194 Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 6/146 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + P+ ++ K+ K L + + I+ LD+ E + V+ K Sbjct: 15 AKKLRREGYVTGNVFGREIEGSIPVQMTQKEAEKFLKANGKGSQIM-LDLDGEQMDVLVK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + D + ++ DF + G V H + N+S + G + + E+ Sbjct: 74 EVDYDSMGSKVLEIDFQALVSGEMV--HSVAEVVIHNQSKVVT--GVVEELLDEIEYKAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 + + + + VD+ DLK+G++I ++D+ Sbjct: 130 PSALVEKVIVDVGDLKVGETIKVKDL 155 >gi|71892246|ref|YP_277980.1| 50S ribosomal protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109893345|sp|Q492J6|RL25_BLOPB RecName: Full=50S ribosomal protein L25 gi|71796352|gb|AAZ41103.1| 50S ribosomal subunit protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 97 Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISK-----RLYSKNFM 61 + A +R KG+ R LRK + PA+IY +P PI L+ DI +LY N Sbjct: 4 IKANLRIYHKKGATRRLRKQNKCPAVIYNRGQEPSIPIILNQNDILHPEAVIQLYKNN-- 61 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 IL ++ + V ++ Q P LIH DF +V Sbjct: 62 -VILLFIENQQPITVKVQELQYHPFKSKLIHIDFTRV 97 >gi|291618131|ref|YP_003520873.1| RplY [Pantoea ananatis LMG 20103] gi|291153161|gb|ADD77745.1| RplY [Pantoea ananatis LMG 20103] gi|327394530|dbj|BAK11952.1| 50S ribosomal protein L25 RplY [Pantoea ananatis AJ13355] Length = 94 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV R + GKG++R LR + PAIIYG I L + F +LTL Sbjct: 4 INAVERKEQGKGASRRLRAANRFPAIIYGGSEAAVAIDLDHDQVMNLQTKPGFYEEVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q P L H DF++ Sbjct: 64 VVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|238757898|ref|ZP_04619080.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238789717|ref|ZP_04633500.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238794238|ref|ZP_04637852.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] gi|238703883|gb|EEP96418.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238722270|gb|EEQ13927.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238726420|gb|EEQ17960.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] Length = 94 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAIIYG IAL D +K L K F ++LTL + Sbjct: 8 VRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALD-HDTTKNLELKPGFYDSVLTLVVD 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|22126797|ref|NP_670220.1| 50S ribosomal protein L25 [Yersinia pestis KIM 10] gi|45441151|ref|NP_992690.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51595640|ref|YP_069831.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108806978|ref|YP_650894.1| 50S ribosomal protein L25 [Yersinia pestis Antiqua] gi|108812873|ref|YP_648640.1| 50S ribosomal protein L25 [Yersinia pestis Nepal516] gi|145599702|ref|YP_001163778.1| 50S ribosomal protein L25 [Yersinia pestis Pestoides F] gi|149366752|ref|ZP_01888786.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|153949273|ref|YP_001401685.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162418620|ref|YP_001606000.1| 50S ribosomal protein L25 [Yersinia pestis Angola] gi|165924387|ref|ZP_02220219.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165936355|ref|ZP_02224924.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|166009819|ref|ZP_02230717.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211351|ref|ZP_02237386.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|167400243|ref|ZP_02305756.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419427|ref|ZP_02311180.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423846|ref|ZP_02315599.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025020|ref|YP_001721525.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186894710|ref|YP_001871822.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|218928418|ref|YP_002346293.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|229841213|ref|ZP_04461372.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843318|ref|ZP_04463464.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229894381|ref|ZP_04509564.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|229903301|ref|ZP_04518414.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|270487105|ref|ZP_06204179.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|68053091|sp|Q66CV3|RL25_YERPS RecName: Full=50S ribosomal protein L25 gi|68053227|sp|Q8ZGM4|RL25_YERPE RecName: Full=50S ribosomal protein L25 gi|123073260|sp|Q1CG40|RL25_YERPN RecName: Full=50S ribosomal protein L25 gi|123245899|sp|Q1C9C3|RL25_YERPA RecName: Full=50S ribosomal protein L25 gi|166223733|sp|A4TNE3|RL25_YERPP RecName: Full=50S ribosomal protein L25 gi|166987895|sp|A7FKA7|RL25_YERP3 RecName: Full=50S ribosomal protein L25 gi|226694606|sp|B2K9F2|RL25_YERPB RecName: Full=50S ribosomal protein L25 gi|226694608|sp|A9R3I4|RL25_YERPG RecName: Full=50S ribosomal protein L25 gi|226694609|sp|B1JS45|RL25_YERPY RecName: Full=50S ribosomal protein L25 gi|21959824|gb|AAM86471.1|AE013894_6 50S ribosomal subunit protein L25 [Yersinia pestis KIM 10] gi|45436011|gb|AAS61567.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51588922|emb|CAH20539.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108776521|gb|ABG19040.1| LSU ribosomal protein L25P [Yersinia pestis Nepal516] gi|108778891|gb|ABG12949.1| LSU ribosomal protein L25P [Yersinia pestis Antiqua] gi|115347029|emb|CAL19921.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|145211398|gb|ABP40805.1| LSU ribosomal protein L25P [Yersinia pestis Pestoides F] gi|149291126|gb|EDM41201.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|152960768|gb|ABS48229.1| ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162351435|gb|ABX85383.1| ribosomal protein L25 [Yersinia pestis Angola] gi|165915969|gb|EDR34577.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|165923447|gb|EDR40579.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165991215|gb|EDR43516.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207122|gb|EDR51602.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962168|gb|EDR58189.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050192|gb|EDR61600.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056695|gb|EDR66458.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751554|gb|ACA69072.1| ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186697736|gb|ACC88365.1| ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|229679071|gb|EEO75174.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|229689665|gb|EEO81726.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229697579|gb|EEO87626.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703779|gb|EEO90795.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|270335609|gb|EFA46386.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|320015891|gb|ADV99462.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 94 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAI+YG IAL D +K L K F ++LTL I Sbjct: 8 VRNDQGKGASRRLRAANKFPAIVYGGSEAAISIALD-HDTTKNLELKPGFYDSVLTLVID 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|238753023|ref|ZP_04614480.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] gi|238708744|gb|EEQ01005.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] Length = 94 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAIIYG IAL D +K L K F ++LTL + Sbjct: 8 VRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALD-HDTTKNLEIKPGFYDSVLTLVVD 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|152971157|ref|YP_001336266.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895745|ref|YP_002920481.1| 50S ribosomal protein L25 [Klebsiella pneumoniae NTUH-K2044] gi|166223691|sp|A6TBR5|RL25_KLEP7 RecName: Full=50S ribosomal protein L25 gi|150956006|gb|ABR78036.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548063|dbj|BAH64414.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 94 Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG + P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGAAAPVAIELDHDKVWNMQDKAEFYSEVLTV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q L H DF++ Sbjct: 64 VVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|229823129|ref|ZP_04449198.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] gi|229787295|gb|EEP23409.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] Length = 101 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LT 66 L A +R+KVG GSA+ +R+ G +PA +YG S+ + ++ +++ L ++ L Sbjct: 12 LKAELREKVGSGSAKKVREAGLVPATLYGKGSEAVSLTVNRRELDVVLKTQGLSQAFELE 71 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADF 95 D KE +V+ K +SD + DF Sbjct: 72 FDGKKE--NVVVKAVNKAALSDEIYSVDF 98 >gi|300717594|ref|YP_003742397.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] gi|299063430|emb|CAX60550.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] Length = 94 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 39/85 (45%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG++R LR + PAIIYG P I L + F T +LTL + + Sbjct: 9 RKEQGKGASRRLRLANKFPAIIYGGEVAPIAIELDHDSVMNIQAKPGFYTDVLTLVVNGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQ 97 V + Q P L H DF++ Sbjct: 69 EEKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|283797259|ref|ZP_06346412.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] gi|291075109|gb|EFE12473.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] Length = 193 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + PI + D ++RL + + + L++ + + V+ K Sbjct: 15 AKRLRREGFVTGNVFGKEIKGSIPIKIVKAD-AERLLKTSGRGSQIMLNVDGQDMDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + + + + DF + G V + +N K G L V HEVS Sbjct: 74 EVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVTT----GVLQQVLHEVSYRAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + + I +D+ D+++GDSI + D+ + Sbjct: 130 PSALVEKIELDVGDMRVGDSIKVRDLAIA 158 >gi|85059550|ref|YP_455252.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] gi|109893397|sp|Q2NSM8|RL25_SODGM RecName: Full=50S ribosomal protein L25 gi|84780070|dbj|BAE74847.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] Length = 94 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++AV+R GKG++R LR + PAI+YG P I L + + F T +L L Sbjct: 4 INAVIRKDQGKGASRRLRLANKFPAIVYGGTKAPVAIELDHDIVLNTQTKEGFYTDVLAL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q L H DF++ Sbjct: 64 VIDGKESKVKVQAVQRHSFKPKLTHIDFVR 93 >gi|255283668|ref|ZP_05348223.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] gi|255265733|gb|EET58938.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] Length = 195 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/167 (20%), Positives = 78/167 (46%), Gaps = 8/167 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + + P+ ++ KD + L + N + I+ LD+ + V+ K Sbjct: 15 AKKLRREGYVTGNVFGKELKESIPVQITKKDAERLLKTCNKGSQIM-LDVEGRKLDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + + + + DF + G V V +N K G + + HE++ Sbjct: 74 EIDYNSMKRQIDEIDFQALVSGEEVHSVAEVVLLNHEKVVN----GLIQLKLHEIAYKAV 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIATI 184 + D + +++ ++KIGD++ ++D+ + EK M+ + T+ Sbjct: 130 PEALVDKVEINMENMKIGDTVLVKDLDIASNEKIHLMTDPEAVVVTV 176 >gi|262040201|ref|ZP_06013453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330015786|ref|ZP_08308278.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] gi|259042438|gb|EEW43457.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328530487|gb|EGF57360.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] Length = 94 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG + P I L + F + +LT+ Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKVWNMQDKAEFYSEVLTV 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q L H DF++ Sbjct: 64 VVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|188588817|ref|YP_001921405.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|188499098|gb|ACD52234.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] Length = 182 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/168 (20%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Query: 18 KGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 K + + LR+ G IP +I+G + + P+ + + +K + + N +I+TL++ + ++ Sbjct: 14 KENKKGLRRIGLIPGVIFGEFLKESIPVKMPTGEFNKMITNNN-SGSIITLNLNDKKINC 72 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + K+ Q S IL H F V + + +P++++ + + L + Sbjct: 73 VVKEIQKLSPSKIL-HVSFQSVKPNEKIKMRIPIKYVGQENLETNRL--LLETFTPFIDF 129 Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 IP+ + V+++ + D + +EDI +P+ ++ +A I Sbjct: 130 QGDVEKIPEFLEVNVSKMNCEDKLFVEDISVPDDVLVLTDPKTLLAVI 177 >gi|325262957|ref|ZP_08129693.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] gi|324032051|gb|EGB93330.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] Length = 192 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 9/170 (5%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR++G +P ++G S P I+L + I++RL + L LD+ ++L+ V K Sbjct: 16 AKQLRRSGIVPGSVFGG-SLPDSISLQMDEGIARRLIRYKREGSKLKLDLDRQLIPVQIK 74 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + ++ +++ ++H F + V + + N K +G L E+ Sbjct: 75 EKTINTLNNEILHISFQALKADLKVNSVIHIILKNTEKITESLEGMLL-----EIPYAAF 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 ++ D+IT+D++ + +G I + DI PE S L + IV IS Sbjct: 130 PEDMIDTITIDVDGMAVGTVITVADI--PELMSEKIDLQVEKEEIVLRIS 177 >gi|213026467|ref|ZP_03340914.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 71 Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG P I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTL 63 Query: 68 DI-GKEL 73 + GKE+ Sbjct: 64 VVDGKEV 70 >gi|311278832|ref|YP_003941063.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] gi|308748027|gb|ADO47779.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] Length = 94 Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-G 70 +R + GKG++R LR ++PAIIYG + P + L + F + +LTL I G Sbjct: 8 VRKEQGKGASRRLRAANKVPAIIYGGAAAPVSVELDHDKVFNAQAKTEFYSDVLTLVIDG 67 Query: 71 KE 72 KE Sbjct: 68 KE 69 >gi|225028646|ref|ZP_03717838.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] gi|224954032|gb|EEG35241.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] Length = 194 Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 8/159 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LSA RD K A+ LR+ G + ++G NM P+ + K+ + L + N + L Sbjct: 4 LSAEKRDMQIK--AKKLRREGFVTGNVFGKNMEGSMPLKIEKKEAERILRTCN-KGSQLI 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + + + V+ K+ + + ++ DF + +G V V +N K + G Sbjct: 61 LTVEGQKMPVLLKEIDYNAMKHEIVEMDFQALVKGEKVHSVAEVVLLNHEKV----KSGV 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 + ++ E+S N+ + + +DL+ GD+I ++D+ Sbjct: 117 VELLLEEISYEALPENLIEKVEIDLDGKTAGDTIRVKDL 155 >gi|295098121|emb|CBK87211.1| LSU ribosomal protein L25P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 94 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 42/90 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ GKG++R LR + PAI+YG + P I L + F + +LT+ Sbjct: 4 IEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVAIELDHDKVWNMQNKAEFYSEVLTI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q L H DF++ Sbjct: 64 VVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|256372367|ref|YP_003110191.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] gi|256008951|gb|ACU54518.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] Length = 172 Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 13/158 (8%) Query: 28 GQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPV 86 G++P I+YG +++P + L L + +L ++I E+ V + PV Sbjct: 24 GKVPGIVYGAGLTEPVAVTLDRHGFLTALGQHAVVGQLLDIEIDGEVRTVKLQAVVRHPV 83 Query: 87 SDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDS 146 L H DFL V TV V VP ++ G + +V V++ ++P S Sbjct: 84 RRELSHLDFLAVGASETVEVQVP-----------LEAGEGVRLVVGLVAVSGTPTSVPSS 132 Query: 147 ITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I V DL S+ + LP S + +AT+ Sbjct: 133 IHVG-ADLLADGSVTAGALPLPAGVSLVEAPETVVATV 169 >gi|295115799|emb|CBL36646.1| LSU ribosomal protein L25P [butyrate-producing bacterium SM4/1] Length = 193 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + PI + D ++RL + + + L++ + + V+ K Sbjct: 15 AKRLRREGFVTGNVFGKEIKGSIPIKIVKVD-AERLLKTSGRGSQIMLNVDGQDMDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + + + + DF + G V + +N K G L V HEVS Sbjct: 74 EVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVTT----GVLQQVLHEVSYRAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + + I +D+ D+++GDSI + D+ + Sbjct: 130 PSALVEKIELDVGDMRVGDSIKVRDLAIA 158 >gi|295092382|emb|CBK78489.1| LSU ribosomal protein L25P [Clostridium cf. saccharolyticum K10] Length = 193 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + PI + D ++RL + + + L++ + + V+ K Sbjct: 15 AKRLRREGFVTGNVFGKEIKGSIPIKIVKVD-AERLLKTSGRGSQIMLNVDGQDMDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + + + + DF + G V + +N K G L V HEVS Sbjct: 74 EVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVTT----GVLQQVLHEVSYRAL 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + + I +D+ D+++GDSI + D+ + Sbjct: 130 PSALVEKIELDVGDMRVGDSIKVRDLAIA 158 >gi|157371491|ref|YP_001479480.1| 50S ribosomal protein L25 [Serratia proteamaculans 568] gi|166987894|sp|A8GGW2|RL25_SERP5 RecName: Full=50S ribosomal protein L25 gi|157323255|gb|ABV42352.1| ribosomal protein L25 [Serratia proteamaculans 568] Length = 94 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 38/87 (43%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R GKG++R LR + PAI+YG P I L + F + +TL I Sbjct: 8 VRKDQGKGASRRLRIANKFPAIVYGGEEAPVSIELDHDSVKNMESKPEFYSEAVTLVIDG 67 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q P L H DF +V Sbjct: 68 KETKVKVQAVQRHPFKPKLAHIDFRRV 94 >gi|329298034|ref|ZP_08255370.1| 50S ribosomal protein L25 [Plautia stali symbiont] Length = 94 Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG I L + F + +LTL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAVSIELDHDAVMNMQAKPEFYSDVLTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q P L H DF++ Sbjct: 64 VVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|222630912|gb|EEE63044.1| hypothetical protein OsJ_17852 [Oryza sativa Japonica Group] Length = 83 Score = 41.6 bits (96), Expect = 0.049, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 120 GIKQGGK-LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 G ++GG N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 6 GYREGGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKV 54 >gi|291548563|emb|CBL24825.1| LSU ribosomal protein L25P [Ruminococcus torques L2-14] Length = 197 Score = 41.6 bits (96), Expect = 0.050, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 10/168 (5%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + D P+ +I K L ++ ++ L++ E + K Sbjct: 15 AKKLRREGFVTGNLFGRELEDSIPLKFDKAEIEKLLKVESKGGQVM-LEVAGETYDALIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN-ENKSPGIKQGGKLNVVCHEVSLLC 138 + +P+ + DF + V + +N E S G+ Q + E+S Sbjct: 74 EVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLEKLSSGVPQQ-----MLQEISFKA 128 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQLNITIATI 184 + + + VD+ LKIGD+I + D+ + + M+ L+ T+ TI Sbjct: 129 LPAALVEKVEVDVGPLKIGDTIRVADLPIAKDKDVDLMTDLDATVVTI 176 >gi|206577853|ref|YP_002237395.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288934321|ref|YP_003438380.1| ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|290508524|ref|ZP_06547895.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] gi|226736332|sp|B5XP25|RL25_KLEP3 RecName: Full=50S ribosomal protein L25 gi|206566911|gb|ACI08687.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288889050|gb|ADC57368.1| Ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|289777918|gb|EFD85915.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] Length = 94 Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG + P I L + F ++TL Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKLWNMQDKAEFYGEVVTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 I + V + Q L H DF++ Sbjct: 64 VIDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|159487761|ref|XP_001701891.1| predicted protein [Chlamydomonas reinhardtii] gi|158281110|gb|EDP06866.1| predicted protein [Chlamydomonas reinhardtii] Length = 373 Score = 41.2 bits (95), Expect = 0.068, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%) Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 ++ V P ++ V+ + D + V V VPVR +N++ +PG+K+GG + + Sbjct: 254 MLRVKPTRVFVNAVTQRVEGLDLIYCPPERQVLVDVPVRLLNDDLAPGVKKGGWIALFKR 313 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 V IP I V++ ++ + + + D+ +P T Sbjct: 314 TVRYKALGGAIPPYIEVNVRNMDLDQDMLVRDMPIPPGT 352 >gi|319760596|ref|YP_004124534.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] gi|318039310|gb|ADV33860.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] Length = 101 Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 12/98 (12%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY--GNMSDPKPIALSAKDISK-----RLYSKN 59 K++A +R + R LR + PAIIY + PI L+ KDI Y N Sbjct: 3 KINAELRIAIKTAGVRRLRNQEKCPAIIYYKNKKFENLPIILNNKDIQHPNSIIHFYKNN 62 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFL 96 IL L+I K +V V K+ Q P +IH DF+ Sbjct: 63 ----ILKLNIQNKSIVQVQIKEIQYHPYRSKIIHIDFM 96 >gi|213162257|ref|ZP_03347967.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 81 Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 36/80 (45%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVI 77 KG++R LR + PAIIYG P I L + F + +LTL + + V V Sbjct: 1 KGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDGKEVKVK 60 Query: 78 PKDYQLDPVSDILIHADFLQ 97 + Q L H DF++ Sbjct: 61 AQAVQRHAYKPKLTHIDFVR 80 >gi|242239779|ref|YP_002987960.1| ribosomal protein L25 [Dickeya dadantii Ech703] gi|242131836|gb|ACS86138.1| ribosomal protein L25 [Dickeya dadantii Ech703] Length = 95 Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI--L 65 ++A +R++ GK ++R LR G+ PAI+YG P I L DI K L +N + Sbjct: 4 INAEVRNEQGKSASRRLRNTGKFPAIVYGGNEAPVSIVLD-HDIVKNLEDRNSAELFGEI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V + Q L H DF++V Sbjct: 63 ELVIDGKATKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|219685943|ref|ZP_03540741.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] gi|219672517|gb|EED29558.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] Length = 86 Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Query: 107 HVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 +VP++ I S G+K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ Sbjct: 9 YVPIKLIG--ASVGVKEGGILTVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLV 66 Query: 167 LPEKTS-SMSQLNITIATI 184 LP + + N+ + TI Sbjct: 67 LPSNVKLAENDENLEVVTI 85 >gi|237830665|ref|XP_002364630.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|211962294|gb|EEA97489.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|221507509|gb|EEE33113.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 313 Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + L IG + IP Q DPV+ L F + G V +P + P Sbjct: 141 FQARLFRLRIGNWIEECIPTFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACP 200 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSM 174 ++G + +V + C IP VD++ L +I ++D++ LP S+ Sbjct: 201 AYQRGYHVELVMPTIRCQCVGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPADGSAR 260 Query: 175 SQLNITIAT 183 + AT Sbjct: 261 FHPSYDAAT 269 >gi|221487715|gb|EEE25947.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 313 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + L IG + IP Q DPV+ L F + G V +P + P Sbjct: 141 FQARLFRLRIGNWIEECIPTFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACP 200 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSM 174 ++G + +V + C IP VD++ L +I ++D++ LP S+ Sbjct: 201 AYQRGYHVELVMPTIRCQCVGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPADGSAR 260 Query: 175 SQLNITIAT 183 + AT Sbjct: 261 FHPSYDAAT 269 >gi|238761997|ref|ZP_04622970.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] gi|238699725|gb|EEP92469.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] Length = 94 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 +R+ GKG++R LR + PAIIYG S+P D +K + K F ++LTL + Sbjct: 8 VRNDQGKGASRRLRAANKFPAIIYGG-SEPAIAITLDHDTTKNIELKPGFYDSVLTLVVD 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + V + Q L H DF++V Sbjct: 67 GKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|259907985|ref|YP_002648341.1| 50S ribosomal protein L25 [Erwinia pyrifoliae Ep1/96] gi|224963607|emb|CAX55100.1| 50S ribosomal subunit protein L25 [Erwinia pyrifoliae Ep1/96] gi|283477872|emb|CAY73788.1| 50S ribosomal protein L25 [Erwinia pyrifoliae DSM 12163] gi|310768106|gb|ADP13056.1| 50S ribosomal protein L25 [Erwinia sp. Ejp617] Length = 94 Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 37/85 (43%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG++R LR + PAIIYG I L + F +LTL + + Sbjct: 9 RKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYEEVLTLVVDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQ 97 V + Q P L H DF++ Sbjct: 69 ETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|238755440|ref|ZP_04616781.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] gi|238706377|gb|EEP98753.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] Length = 94 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILT 66 ++A +R+ GKG++R LR + PAI+YG IAL D +K + K F + Sbjct: 4 INAEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALD-HDTTKNMELKPGFYNEPVA 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 63 LVIDGKEVKVQVQAVQRHAFKPKLTHIDFVRV 94 >gi|292488791|ref|YP_003531678.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|292899942|ref|YP_003539311.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291199790|emb|CBJ46911.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291554225|emb|CBA21495.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|312172944|emb|CBX81199.1| 50S ribosomal protein L25 [Erwinia amylovora ATCC BAA-2158] Length = 94 Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 37/85 (43%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG++R LR + PAIIYG I L + F +LTL + + Sbjct: 9 RKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVLNLQSKPGFYEEVLTLVVDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQ 97 V + Q P L H DF++ Sbjct: 69 ETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|188533402|ref|YP_001907199.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] gi|226736320|sp|B2VII8|RL25_ERWT9 RecName: Full=50S ribosomal protein L25 gi|188028444|emb|CAO96306.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] Length = 94 Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 37/85 (43%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R + GKG++R LR + PAIIYG I L + F +LTL + + Sbjct: 9 RKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYDEVLTLVVDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQ 97 V + Q P L H DF++ Sbjct: 69 ETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|94676575|ref|YP_588833.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219725|gb|ABF13884.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 94 Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT---I 64 L A R K G ++ LR G++PAI+YG + P I L D +K ++ KN ++ + Sbjct: 4 LQAENRKKTGTRASNRLRIAGKLPAILYGGNTQPIAIEL---DSTKYMHIKNQISLDNDL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L L I ++ V Q P + H DF++V Sbjct: 61 LALVINGKIFTVKVWAIQHHPFKPQITHIDFIRV 94 >gi|289608549|emb|CBI60572.1| unnamed protein product [Sordaria macrospora] Length = 88 Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 I KD Q DPV +++ H D L V +G V V VPV E+ +PG L + E Sbjct: 22 IAKDVQRDPVRNVIEHVDLLIVKKGEKVAVEVPVAVTGES-APGTIHLVDLQTLAIE--- 77 Query: 137 LCPANNIPDSI 147 A ++P+S+ Sbjct: 78 -AEATHLPESV 87 >gi|270262760|ref|ZP_06191031.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] gi|270043444|gb|EFA16537.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] Length = 94 Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 37/86 (43%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R GKG++R LR + PAI+YG I L + F + +TL I Sbjct: 8 VRKDQGKGASRRLRAANKFPAIVYGGEEAAVSIELDHDSVKNMEAKPEFYSEAVTLVIDG 67 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQ 97 + V + Q P L H DF++ Sbjct: 68 KETKVKVQAVQRHPFKPKLTHIDFVR 93 >gi|227542458|ref|ZP_03972507.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181656|gb|EEI62628.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 213 Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY D +P+ + + +N Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYS--KDTEPVHFTTDRLDLTSIVRNH 58 Query: 61 MT-TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T ++ +DI E + K + +S + H D L + G V V +P Sbjct: 59 GTNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEV-EVPVVYEGEPAP 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G +++ + E +L IPD +TV + L+IG I DI L + + + + ++ Sbjct: 118 GALVFQEVDTLRIESDVLS----IPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDL 173 Query: 180 TIATIV 185 I IV Sbjct: 174 LIINIV 179 >gi|227487817|ref|ZP_03918133.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092319|gb|EEI27631.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 213 Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY D +P+ + + +N Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYS--KDTEPVHFTTDRLDLTSIVRNH 58 Query: 61 MT-TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T ++ +DI E + K + +S + H D L + G V V +P Sbjct: 59 GTNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEV-EVPVVYEGEPAP 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G +++ + E +L IPD +TV + L+IG I DI L + + + + ++ Sbjct: 118 GALVFQEVDTLRIESDVLS----IPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDL 173 Query: 180 TIATIV 185 I IV Sbjct: 174 LIINIV 179 >gi|159899066|ref|YP_001545313.1| 50S ribosomal protein L25/general stress protein Ctc [Herpetosiphon aurantiacus ATCC 23779] gi|259646690|sp|A9B076|RL25_HERA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|159892105|gb|ABX05185.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Herpetosiphon aurantiacus ATCC 23779] Length = 199 Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 7/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L+ R+ GK + LR G +P I G +P + ++ +K + + Sbjct: 1 MANETLRLALQPREITGK-KVQSLRDQGILPIGICGRGIEPYSAQVDEREFNKVINQAGY 59 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I G++ + Q + V++ +IHAD V + V + + V EN Sbjct: 60 -SGLIELSIPGQKRQVAFLLEVQRNSVTNRIIHADLRVVDANAPVELDIHVALQGENDM- 117 Query: 120 GIKQGGK-LNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQL 177 + +G LN+V + + ++P I +D + L +IG I ++D+ LP + + Sbjct: 118 -VSRGNAVLNLVQSVIRVRALPGDVPHQIDIDASSLTEIGQQILVKDLSLPATVEILDDV 176 Query: 178 NITIATIVAP 187 I T+ P Sbjct: 177 ETLILTLGYP 186 >gi|153813481|ref|ZP_01966149.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] gi|149830425|gb|EDM85517.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] Length = 199 Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/148 (20%), Positives = 69/148 (46%), Gaps = 6/148 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + P+ +S ++ K L + + + ++ L++ + + K Sbjct: 15 AKRLRREGYVTGNVFGREIEGSIPVKMSKSEVDKLLKTDHKGSQVM-LEVDGQTYDALIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + +P++ + DF + V + +N +K G L E++ Sbjct: 74 EVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDKVAD----GVLQENMEEINYRAY 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + + D + VD+ LK+GD+I ++D+ L Sbjct: 130 PSALVDKVEVDVAGLKVGDTIRVKDLSL 157 >gi|160879857|ref|YP_001558825.1| glycoside hydrolase family protein [Clostridium phytofermentans ISDg] gi|160428523|gb|ABX42086.1| glycoside hydrolase family 85 [Clostridium phytofermentans ISDg] Length = 951 Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 12/98 (12%) Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 D VSEG T + ++NEN++P GK N + C + P IT+DL Sbjct: 810 GDIPVVSEGKTTSAS---GYVNENEAPRFAVDGKTN------TKWCATGSAPHDITIDLG 860 Query: 153 DLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 + K+ ++M EK + S +N + TI + G Sbjct: 861 ENKMVSEVYMAH---AEKGNESSDMNTSWYTIETSLDG 895 >gi|295698302|ref|YP_003602957.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] gi|291157435|gb|ADD79880.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] Length = 98 Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI---SKRLYSKNFMT 62 ++ A +R GK R ++K +IPAI++ + + I + KDI K + +NF Sbjct: 2 IQIGAKIRTSTGKVYNRRIKKRKEIPAILHIKKNKNRLIRIQRKDILKLEKNVNPRNFF- 60 Query: 63 TILTLDIGKELV---HVIPKDYQLDPVSDILIHADFLQV 98 +L + KE + +V ++ Q P + +IH DF +V Sbjct: 61 -VLQIKFSKENLEERNVRIQEVQRHPYTGEIIHIDFFEV 98 >gi|149200624|ref|ZP_01877628.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] gi|149136298|gb|EDM24747.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] Length = 197 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 4/148 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ VGK S +L R+ IP + G + I ++ KD+ + + T I+ L Sbjct: 5 LKAAKREIVGKKSKKL-RREAIIPGNLQGRKIENVNIQIAQKDLQVAIKAAG-TTNIIEL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+ ++ +H +F V VPV+ + +NK I GG L Sbjct: 63 DVDGTKHEVLLREVLRTTNQQHFVHVEFYAPDMDVAVKTSVPVKVVGDNKL--ITAGGIL 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLK 155 + L +P+ I VD++ L+ Sbjct: 121 VTPQSNLELAALPKALPEFIEVDISSLQ 148 >gi|304413081|ref|ZP_07394554.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] gi|304283924|gb|EFL92317.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] Length = 99 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-NFMTTILTLDIG 70 ++D+V KG++R LR + PA++YG I L +D+ L SK F LTL I Sbjct: 11 VKDQV-KGASRRLRAKNKFPAVVYGGTEQAISIVLE-QDVITNLESKPGFYGEPLTLMID 68 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQV 98 + +V + Q P H DF++V Sbjct: 69 DKANNVKVQAVQRHPFKPKFTHIDFMRV 96 >gi|123441746|ref|YP_001005730.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162314|ref|YP_004298891.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223732|sp|A1JLN0|RL25_YERE8 RecName: Full=50S ribosomal protein L25 gi|122088707|emb|CAL11512.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606385|emb|CBY27883.1| LSU ribosomal protein L25p [Yersinia enterocolitica subsp. palearctica Y11] gi|325666544|gb|ADZ43188.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860252|emb|CBX70569.1| 50S ribosomal protein L25 [Yersinia enterocolitica W22703] Length = 95 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK--NFMTTIL 65 + A +R+ GKG++R LR + PAIIYG I L D +K L K + T L Sbjct: 4 IKAEVRNDQGKGASRRLRAANKFPAIIYGGSEAAIAIELD-HDTTKNLELKPGFYDNTGL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF+++ Sbjct: 63 TLVINGKETKVKVQAVQRHAFKPKLTHIDFVRI 95 >gi|224171812|ref|XP_002339565.1| predicted protein [Populus trichocarpa] gi|222875359|gb|EEF12490.1| predicted protein [Populus trichocarpa] Length = 92 Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 26/41 (63%) Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 LN + V +CPA+ IP I VDL++L +G + M D+++ Sbjct: 24 LNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKV 64 >gi|167765811|ref|ZP_02437864.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|167712528|gb|EDS23107.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|291559174|emb|CBL37974.1| ribosomal protein L25, Ctc-form [butyrate-producing bacterium SSC/2] Length = 193 Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 8/161 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A RD K A+ LRK G + ++G ++ + P+ + +++ +K L N +T Sbjct: 4 LTAEKRDL--KTKAKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFL-KDNKKGAHIT 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 61 LLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDAV----QNGI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + E+ +I + + +DL +GD IH++D+ L Sbjct: 117 VEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPL 157 >gi|297722347|ref|NP_001173537.1| Os03g0612600 [Oryza sativa Japonica Group] gi|255674701|dbj|BAH92265.1| Os03g0612600 [Oryza sativa Japonica Group] Length = 66 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 17/29 (58%), Positives = 20/29 (68%) Query: 137 LCPANNIPDSITVDLNDLKIGDSIHMEDI 165 LCPA +IP I VDL +L IGD + M DI Sbjct: 11 LCPAEHIPPKIEVDLANLDIGDRVSMNDI 39 >gi|125973813|ref|YP_001037723.1| 50S ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|256004546|ref|ZP_05429525.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281417970|ref|ZP_06248990.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|125714038|gb|ABN52530.1| LSU ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|255991551|gb|EEU01654.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281409372|gb|EFB39630.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|316939993|gb|ADU74027.1| Ribosomal protein L25-like protein [Clostridium thermocellum DSM 1313] Length = 105 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L+ R +G ++R +++ G+IP ++Y G+ S PI+L +I + + KN Sbjct: 2 EEFELNIENRTALGTSASRKVKREGKIPGVLYQGDKS--IPISLIEDEI-RPIVDKNGSD 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 ++ +++ + + + Q PVSD ++H D + + G Sbjct: 59 VLVNVNLNGKRIKAKIHEVQRKPVSDEILHVDLMPLDGG 97 >gi|317496869|ref|ZP_07955199.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895881|gb|EFV18033.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] Length = 193 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 8/161 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A RD K A+ LRK G + ++G ++ + P+ + +++ +K L N +T Sbjct: 4 LTAEKRDL--KTKAKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFL-KDNKKGAHIT 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 61 LLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDAV----QNGI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 + E+ +I + + +DL +GD IH++D+ L Sbjct: 117 VEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPL 157 >gi|291562562|emb|CBL41378.1| LSU ribosomal protein L25P [butyrate-producing bacterium SS3/4] Length = 203 Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 21 ARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G+ + P+ +++ D ++RL + LDI ++ V+ K Sbjct: 15 AKRLRREGFVTGNVFGHAIEGSIPVKMNSVD-AERLLKTEHKGGQINLDIEGQVYDVLIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + + ++ + DF + VT + +N G G L EV+ Sbjct: 74 EVDYNAMTRKIDEIDFQALVSTEKVTSTAEIVILNREAVIG----GVLQEDLSEVAYRAF 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDI 165 + + + T+D LK+GD +H++D+ Sbjct: 130 PSALIEKTTLDAAGLKVGDIVHVKDL 155 >gi|167011125|ref|ZP_02276056.1| ribosomal L25p family protein [Francisella tularensis subsp. holarctica FSC200] Length = 57 Score = 36.6 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 L A R+ +G G++R LR+ G+IPA+IYG + + L D K L+S Sbjct: 6 LKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLL---DHDKVLHS 52 >gi|87306413|ref|ZP_01088560.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] gi|87290592|gb|EAQ82479.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] Length = 90 Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R+ GK + R LR G+IPA++YGN + + + A + + + K + + Sbjct: 5 LNVKKRELTGKLNNRRLRNAGKIPAVLYGNGQESVSLEVCADEFAAIVRHK-----VKNI 59 Query: 68 DIGKELV-HVIPKDYQLDPVSDILIHADFLQ 97 ++ ++ +V+ +D Q D + H DF + Sbjct: 60 ELAGDVTGNVVMRDIQWDTFGVDVQHIDFYR 90 >gi|108709803|gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 182 Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 17/133 (12%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG--------NMSDPKPIALSAKDISKRL-YSK 58 + A+ R+ G +A R++G++PA++ ++ K + K + + L S Sbjct: 38 IQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSP 97 Query: 59 NFMTTILTLDI-----GKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++T + L + +VH V+P D + +++ ++ EG+ + V++PV Sbjct: 98 YFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLPV 157 Query: 111 RFINENKSPGIKQ 123 F E+ PG+K+ Sbjct: 158 EFKGEDVCPGLKK 170 >gi|124505281|ref|XP_001351382.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] gi|23498189|emb|CAD49160.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] Length = 286 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 11/154 (7%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELV 74 L++ NG IPAII+ + + I + K I + + + F + + I ++V Sbjct: 69 ELIQANGYIPAIIWKYGIEER-ICIPHKLIDEYAFEEEDGHLSLLFSARLFRVHIHGKVV 127 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 + + + DP+ + F +V E ++VP I P G + + + + Sbjct: 128 NCVVSHVEADPIEKHIYFLKFARVVENQITEINVPCSIIGLIGCPAYINGYHVQLAMNSI 187 Query: 135 SLLCPANNIPDSITVDLNDLKIGD---SIHMEDI 165 +NIP +D++ L + SI ++D+ Sbjct: 188 KCKVLGSNIPGPFQIDVSKLTYKEPYNSIKLKDL 221 >gi|295109370|emb|CBL23323.1| LSU ribosomal protein L25P [Ruminococcus obeum A2-162] Length = 199 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/149 (20%), Positives = 68/149 (45%), Gaps = 6/149 (4%) Query: 21 ARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 A+ LR+ G + ++G + P+ + ++ K L + + + ++ L++ + + K Sbjct: 15 AKRLRREGYVTGNVFGREIEGSIPVKMLKTEVDKLLKTDHKGSQVM-LEVDGQTYDALIK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + +P++ + DF + V + +N +K G L EV+ Sbjct: 74 EVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDKVAD----GVLQENMEEVNYKAY 129 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + + D + VD+ LK+GD+I ++D+ L Sbjct: 130 PSALVDKVEVDVAGLKVGDTIRVKDLSLA 158 >gi|282858158|ref|ZP_06267353.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] gi|282584080|gb|EFB89453.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] Length = 101 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Query: 11 VMRDKVGKGSARL--LRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 V+ ++ G GSA LRK G +PA++YG + + + K + L S + T+ Sbjct: 8 VLENREGSGSAYCGRLRKEGFLPAVVYGPALEQTYSVKVETKTMLPYLMSDDVKKTVFAA 67 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSE 100 + E+ + + K + +D L+H DF +E Sbjct: 68 KLPNGEVKNCVIKSATKNYATDRLLHIDFYCANE 101 >gi|293395239|ref|ZP_06639524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] gi|291422196|gb|EFE95440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] Length = 94 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 38/90 (42%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A +R + GKG++R LR + PAIIYG I L + F + L Sbjct: 4 INAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAIAIELDHDSVKNMEAKPEFYAEAIVL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + V + Q L H DF++ Sbjct: 64 VVDGKETKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|156094635|ref|XP_001613354.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802228|gb|EDL43627.1| hypothetical protein, conserved [Plasmodium vivax] Length = 285 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 21/164 (12%) Query: 22 RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELV 74 LL+ +G IPAII+ ++ + I + + I + + + F + + + +V Sbjct: 68 ELLQVHGYIPAIIWKYGAEQR-ICIDHRLIDEYAFEEEDGHLSLLFSARLFRIHVDGNVV 126 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 + + DPV + F +V +++P + P G + + + + Sbjct: 127 ECVVSHVEADPVEKHIYFLKFARVVSNQVTELNIPCSIVGLIGCPAYVNGYHVQLAMNYI 186 Query: 135 SLLCPANNIPDSITVDL---------NDLKIGDSIHMEDIRLPE 169 NNIP +D+ N +K+G+ H+ LPE Sbjct: 187 KCKVIGNNIPPPFQIDVSRLTYKEPYNSIKLGELAHL----LPE 226 >gi|299471227|emb|CBN79082.1| ribosomal protein L25, Ctc-form [Ectocarpus siliculosus] Length = 293 Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+ +L PV L+ ++++ G + P++FIN + + ++G + + Sbjct: 155 VLANQSRLHPVFRTLLSVNWIRYKAGRKYPI--PIKFINSDLNENFRKGAYIRRLKTHQH 212 Query: 136 LLCPANN--IPDSITVDLNDLKIGDSIHMEDIRLPE 169 +L P + +P + +DL ++ G + + D+ +PE Sbjct: 213 ILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPE 248 >gi|198427256|ref|XP_002130507.1| PREDICTED: similar to RAP1, GTPase activating protein 1 isoform 2 [Ciona intestinalis] Length = 756 Score = 35.0 bits (79), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 39 SDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 SDP+ + + +S RL T +GKE V++ DY + + I++ + V Sbjct: 150 SDPRTLKPTQTPVSCRLQRDEVTTAYRDHFVGKEHVNIYAYDYNSENIGSIIMSVKYESV 209 Query: 99 SEGSTVTVH 107 +EGS + H Sbjct: 210 AEGSDLGQH 218 >gi|156089617|ref|XP_001612215.1| hypothetical protein [Babesia bovis T2Bo] gi|154799469|gb|EDO08647.1| conserved hypothetical protein [Babesia bovis] Length = 263 Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 13/172 (7%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELVHV 76 L G +PA++ + P + + DI + + F + L IG ++ Sbjct: 48 LWAEGLVPALVTLH-GYPSKVYIKRGDIFSLAFDEEHGHLSHLFTGRLYNLKIGNDIERC 106 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + D + DP+ +L F + EG V +P + SP +G + ++ + Sbjct: 107 VITDVKCDPIEKVLYFVKFARHVEGEISEVDIPCSVVGLMASPAYLKGYHVQLMMPTIKC 166 Query: 137 LCPANNIPDSITVDLNDLKIGD---SIHMEDI--RLPEKTSSMSQLNITIAT 183 +P +D++ L + SI ++DI LP S + I T Sbjct: 167 EVAGKTVPPPFQIDVSKLDYREPYNSIVLKDILHLLPNDHSVFFHRSYDIET 218 >gi|254670776|emb|CBA07078.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] Length = 54 Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%) Query: 142 NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIATI 184 NIP + +D ++ GD +H+ DI+LPE S+S N+ +AT+ Sbjct: 4 NIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVATV 49 >gi|198427258|ref|XP_002130491.1| PREDICTED: similar to RAP1, GTPase activating protein 1 isoform 1 [Ciona intestinalis] Length = 835 Score = 34.3 bits (77), Expect = 8.2, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 39 SDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 SDP+ + + +S RL T +GKE V++ DY + + I++ + V Sbjct: 229 SDPRTLKPTQTPVSCRLQRDEVTTAYRDHFVGKEHVNIYAYDYNSENIGSIIMSVKYESV 288 Query: 99 SEGSTVTVH 107 +EGS + H Sbjct: 289 AEGSDLGQH 297 Searching..................................................done Results from round 2 >gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] Length = 191 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF Sbjct: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG Sbjct: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT Sbjct: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 Query: 181 IATIVAPISGS 191 IATIVAPISGS Sbjct: 181 IATIVAPISGS 191 >gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42] Length = 233 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 30 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 89 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 90 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 149 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 150 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 209 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 210 IATIVAPAGG 219 >gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 202 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSANTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ VDL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP +G Sbjct: 181 IATIIAPAAG 190 >gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 202 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. viciae 3841] gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv. viciae 3841] Length = 202 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512] Length = 203 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Kim 5] Length = 202 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 95/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGFIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] Length = 203 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli GR56] Length = 204 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 94/190 (49%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV F NE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFTNEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H+V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHQVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CIAT 894] Length = 201 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 99/190 (52%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG LN+V HEV + CPA+ IP+ VDLN KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 IKVGGVLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CFN 42] gi|109893385|sp|Q2K5U4|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 204 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 181 IATIVAPAGG 190 >gi|222086595|ref|YP_002545129.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] Length = 203 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGSAR LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHESYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + V+PKDYQLDPV D +H DFL+VS S VTV +PV F+N+ KSPG Sbjct: 61 LTTIATIDVDGTKIKVLPKDYQLDPVRDFTLHIDFLRVSGNSQVTVEIPVHFVNQEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K GG LN+V HEV + CPA+ IP+ TVDL+ LK GDSIH+ + LP+ + + + Sbjct: 121 LKAGGVLNIVRHEVEVHCPADAIPEFFTVDLSGLKAGDSIHISHVTLPKGVVPVIADRDF 180 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 181 TIATIVAPAAG 191 >gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] Length = 234 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R +VGKGSAR LR+NG IPA+IYG+ DP IALS KD++ ++++ F Sbjct: 24 MSN-TYELKAEARAQVGKGSARELRRNGLIPAVIYGDKKDPVSIALSRKDVTLKIHAGGF 82 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTI T+D+ V+PKDYQLDPV D L+H DFL++S+ + VTV +PV F NE KSPG Sbjct: 83 MTTIATIDVDGTKYSVLPKDYQLDPVRDFLMHVDFLRISKNTQVTVEIPVHFENEEKSPG 142 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H V CPAN+IP+++ VDL L++GD +H+ + LPE ++ + Sbjct: 143 IKRGGVLNVVRHTVECNCPANSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPTITDRDF 202 Query: 180 TIATIVAPIS 189 TIAT+ AP Sbjct: 203 TIATVAAPAG 212 >gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium fredii NGR234] gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234] Length = 228 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 96/187 (51%), Positives = 136/187 (72%), Gaps = 2/187 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS K+++ ++++ F Sbjct: 26 MSQ-TYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSIALSTKEVTMKIHAGGF 84 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG Sbjct: 85 MTTVATIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPG 144 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +KQGG LN+V HEV L A+NIP+ ++VDL+ LKIGD++H+ D++LP + + + + Sbjct: 145 LKQGGTLNIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIADRDF 204 Query: 180 TIATIVA 186 T+ATI Sbjct: 205 TVATIAG 211 >gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 191 Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 134/191 (70%), Positives = 161/191 (84%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+E KL + R+KVGKGS+RLLR+NG+IPA IYGN+S PK IALS KDISKRLYSK+F Sbjct: 1 MSQEEYKLKTITREKVGKGSSRLLRRNGKIPATIYGNISSPKSIALSTKDISKRLYSKHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTI T+D+GKE + V+PKDYQLDPVSD+LIH DFLQ+SE ST++V VP+RFIN+NKSPG Sbjct: 61 MTTIFTIDLGKESIRVLPKDYQLDPVSDVLIHMDFLQISEKSTISVQVPIRFINQNKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN++CHE+ LLCPAN IPDSI+ DL+ LKIGD+IHM DIRLPE +S+S N T Sbjct: 121 LKMGGSLNIICHEIPLLCPANKIPDSISADLDGLKIGDNIHMTDIRLPEGITSVSHANST 180 Query: 181 IATIVAPISGS 191 IA I APIS S Sbjct: 181 IAKISAPISSS 191 >gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] Length = 277 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 93/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 70 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 128 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 129 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 188 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V H+V L+ PAN IP+++ VDL L+IGDS+H+ I+LP+ + + + Sbjct: 189 IKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTPAIQDRDF 248 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 249 TIATIAAPAG 258 >gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella bacilliformis KC583] gi|166223664|sp|A1UTH4|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583] Length = 205 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P I++ K++ +++ F Sbjct: 1 MS-KSYTLKAEVRERVGKGSSRELRRNGFIPAVIYGDKQPPLAISVPYKEVFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI TL+IGKE + V+PKDYQLDPV D +H DFL+VS S V V++PV F+NE+ +PG Sbjct: 60 RTTIATLEIGKEKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ PAN IPD+I +DL+ IGDSIH+ ++LPE + + N Sbjct: 120 IKRGGVLNIVRHEIECTAPANAIPDAIQIDLSSYSIGDSIHISAVQLPEGVTPVIQDRNF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1] Length = 204 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 133/190 (70%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++++ F Sbjct: 1 MS-KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ K+ + V+PKDYQLDPV D +H DFL+VSE S V V++PV F+NE+ +PG Sbjct: 60 RTTVATIEVDKKRIQVLPKDYQLDPVRDFPLHVDFLRVSEKSVVHVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPKGVTPVIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella tribocorum CIP 105476] gi|189042346|sp|A9IR85|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476] Length = 209 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F Sbjct: 1 MS-KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTIATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPIIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP S Sbjct: 180 TIATIAAPAS 189 >gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 213 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 94/187 (50%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK+GG LN+V HEV CPAN IP+ ITVDL IGDSIH+ ++LP + S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGANIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] Length = 208 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 88/188 (46%), Positives = 130/188 (69%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYGN P I++ K+I ++++ F Sbjct: 1 MS-KSYTFKAEIRERVGKGSSRKLRRNGLIPAVIYGNKQPPLAISVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I K+ + V+PKDYQLDP+ D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDKQKIQVLPKDYQLDPIRDFPIHVDFLRISATSVVHVHIPVHFLNEDMAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDF 179 Query: 180 TIATIVAP 187 TIATI AP Sbjct: 180 TIATIAAP 187 >gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium tumefaciens str. C58] gi|71153115|sp|Q8UDA0|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium tumefaciens str. C58] Length = 202 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 97/191 (50%), Positives = 138/191 (72%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + + V+PKDYQLDPV D +H DFL+VS + V V +PV F NE KS Sbjct: 61 MTTVGTIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKSD- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK GG LN+V H V CPAN+IP++ITVDL+ LKIGDS+H+ +++LP+ + + + + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKLPKNITPVIADRDF 179 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 180 TIATIVAPAAG 190 >gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3] Length = 205 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 2/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFKAEIREQVGKGSSRKLRRNGFIPAVIYGDKQPPLAISVPYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSVVHVHIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + + Sbjct: 120 IKRGGILNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDF 179 Query: 180 TIATIVAPISGS 191 TIATI AP + S Sbjct: 180 TIATIAAPANTS 191 >gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis alaskensis RB2256] gi|122985000|sp|Q1GSP2|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256] Length = 212 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 81/186 (43%), Positives = 129/186 (69%), Gaps = 1/186 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R++ GKG++R LR+NG++PA++YG +P I + K + K+L + +FM ++ Sbjct: 4 QLTLTAETRERGGKGASRELRRNGRVPAVVYGGKEEPLMIHVEEKLLMKQLMTGHFMNSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +++G + + +PKD PV D IHADFL++++ +TV V VPV F NE KSPG+K+G Sbjct: 64 VMIEVGGKQIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPVVFQNEEKSPGLKRG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIAT 183 G LN+V HE+ L+C A+NIPD I +D+ IGDSIH+ ++ LP+ +++ + TIAT Sbjct: 124 GVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISNVTLPKGVESAITDRDFTIAT 183 Query: 184 IVAPIS 189 IVAP + Sbjct: 184 IVAPSA 189 >gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium loti MAFF303099] gi|71153162|sp|Q98HV7|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099] Length = 213 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 93/187 (49%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP + S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVQLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|260467097|ref|ZP_05813276.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] gi|259029109|gb|EEW30406.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] Length = 212 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 92/187 (49%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP + S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIVA 186 T+ATI Sbjct: 181 TVATIAG 187 >gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M] gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] Length = 233 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 27 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 85 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 86 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 145 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 146 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 205 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 206 TIATIAAPAG 215 >gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum centenum SW] gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum centenum SW] Length = 205 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 115/190 (60%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q LSA +RD+ GKG+AR R+ G+IPA+IYGN P I+L + L+ F Sbjct: 1 MTQ-TIALSAELRDRAGKGTARQTRREGRIPAVIYGNKEKPVMISLEFNQFFRELHRPGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + ++ + V+P+D Q DPVSD +H DFL+VS + + V +PV F N SPG Sbjct: 60 FTHLFSITVDGATHRVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPVEFANGETSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V HE+ + C A+NIP+ ITVDL D + SIH+ + LPE ++ + Sbjct: 120 IKRGGVLNIVRHEIEVFCRADNIPEHITVDLADADLNSSIHISAVALPEGVRPTIADRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPSG 189 >gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] Length = 203 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 97/188 (51%), Positives = 134/188 (71%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ +D+ + + V+PKDYQLDPV D +H DFL+VS + V V VPV F NE KS Sbjct: 61 MTTVAVIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKSE- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK GG LN+V H V CPAN+IP+ ITVDL+ LKIGDS+H+ +++LP+ S + + + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKLPKNISPVIADRDF 179 Query: 180 TIATIVAP 187 TIATIVAP Sbjct: 180 TIATIVAP 187 >gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis ATCC 25840] gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840] Length = 233 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 27 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGSGF 85 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 86 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 145 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 146 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 205 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 206 TIATIAAPAG 215 >gi|288958834|ref|YP_003449175.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] Length = 198 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 80/188 (42%), Positives = 118/188 (62%), Gaps = 1/188 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L A R++ GKG+AR R++G+IPA+IYG P I+L + ++ L+ F T Sbjct: 2 TKIIPLGAQTRERAGKGTARQTRRDGRIPAVIYGGKQAPVTISLEKFEFTRVLHQPGFFT 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + V+P+D Q PVSDI +H DFL+VS + + V VPV F ++ KS G+K Sbjct: 62 HLFDVTVDGTAHRVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPVEFADQEKSAGLK 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITI 181 +GG LN+V HE+ L CPA+NIP+ IT+ +GDSIH+ ++LPE S+++ + TI Sbjct: 122 RGGVLNIVRHELELSCPADNIPEHITISCEGFDVGDSIHISAVKLPEGVSSAITDRDFTI 181 Query: 182 ATIVAPIS 189 ATIVAP Sbjct: 182 ATIVAPSG 189 >gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium aromaticivorans DSM 12444] gi|109893374|sp|Q2G6G9|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM 12444] Length = 204 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 123/190 (64%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA RD+ GKG++R LR+ G+ PA+IYG +P I L K + K L + +F Sbjct: 1 MS-ETLHLSAETRDRAGKGASRALRREGRTPAVIYGGNEEPVAIHLEEKALVKALGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ L +G + V +PKD PV+D HADFL+VS+ S V V+VPV F NE KSPG Sbjct: 60 FNSVVELTVGGQTVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ L+C + IPD I +D+ ++GDSIH+ ++LP +++ + Sbjct: 120 LKKGGVLNIVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVKSAITDRDF 179 Query: 180 TIATIVAPIS 189 TIATIVAP S Sbjct: 180 TIATIVAPSS 189 >gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus sp. MP688] gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. MP688] Length = 205 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 106/190 (55%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +++AV R+ G G++R LR+ G++P I+YG D + K + + F +I Sbjct: 2 QIEITAVKRENQGTGASRRLRRAGKVPGIVYGASKDAVSVEFDHKALFLEFRHEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 LTL++ + V+ +DYQ+ PV + + H DF +VS + V VP+ FIN++ +PG+K Sbjct: 62 LTLNLDGKKEQVVLRDYQMHPVRNTIQHIDFQRVSATEKLHVKVPLHFINQDIAPGVKLS 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNIT 180 GG + + E + C ++P+ I VDL L+ G SIH+ I+LP+ + + + Sbjct: 122 GGVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSIHLSQIKLPKGVEFVQLAHENDAA 181 Query: 181 IATIVAPISG 190 +A+I P G Sbjct: 182 VASISVPRGG 191 >gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella quintana str. Toulouse] gi|71153120|sp|Q6G0F8|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse] Length = 208 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++Y+ F Sbjct: 1 MS-KSYTLKAELRERVGKGSSRELRRNGFIPAVIYGDKQPPLAIAVSYKEIFYKIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+ +G++ + V+PKDYQLDPV D IH DFL+VS S V V +PV F NE+ +PG Sbjct: 60 RTTVATIAVGQQKIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 +K+GG LN+V HE+ + PAN IP++I +DL++ IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECIAPANAIPEAIEIDLSNYSIGDSIHISVVKLPKDVTPVIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|207727835|ref|YP_002256229.1| 50s ribosomal protein l25 [Ralstonia solanacearum MolK2] gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum MolK2] gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] Length = 203 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 107/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTLHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] Length = 209 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F Sbjct: 1 MS-KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTIATIILDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ PA+ IP++I +DL IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECTAPASAIPEAIEIDLASYSIGDSIHISAVQLPKDVTPIIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia solanacearum CFBP2957] gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CFBP2957] Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 107/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] Length = 209 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 83/183 (45%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A RD+ GKGSAR R+ G +PA+IYG+ DP I L+ +++ K L F + +L Sbjct: 6 TLGASARDRAGKGSARAARREGLVPAVIYGDKQDPVSINLTLRELEKLLTKPGFFSHLLD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+P+D Q PVSD +H DFL+VS S +TV VPV F N+ SPG+++GG Sbjct: 66 IDVAGTKHRVLPRDLQQHPVSDKPLHVDFLRVSASSELTVDVPVEFENDEASPGLRRGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIV 185 LNVV H V + C A++IP+ IT+DL L+IGDS+H+ + LPE + + TIATI Sbjct: 126 LNVVRHSVEVYCRADSIPEKITIDLTGLQIGDSVHISAVTLPEGVRPTIEDRDFTIATIA 185 Query: 186 API 188 AP Sbjct: 186 APT 188 >gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] gi|254801065|sp|B8GLA7|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] Length = 212 Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 6/189 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R GKG++R LR+ G++PAI+YG DP+PI L + L + F + IL Sbjct: 5 FELQAEPRADQGKGASRRLRRAGKVPAILYGEGKDPQPITLDHNAVMLNLEHEAFYSHIL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 ++ +G + I +D Q P I++H D L+VSE + VHVP+ F NE G+K G Sbjct: 65 SVKLGGKAEKAILRDVQRHPCKPIILHLDLLRVSEDHAIRVHVPLHFTNEESCVGVKTGG 124 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNI 179 G ++ EV + C ++P+ I VD+ L +GDS+H+ I LPE S ++ ++ Sbjct: 125 GMVSHQMVEVEVECLPKHLPEFIEVDVASLNVGDSLHLSQISLPEGVSIVALSHGPDHDL 184 Query: 180 TIATIVAPI 188 + +I+ P Sbjct: 185 PVVSILKPR 193 >gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus taiwanensis LMG 19424] gi|226736303|sp|B2AGT7|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus taiwanensis LMG 19424] Length = 205 Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 107/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VD+ +++G ++H+ D++LP+ + ++ N IA Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSDLKLPKGVTVITHGDDNPAIA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SISQPAGA 188 >gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella canis ATCC 23365] gi|254704788|ref|ZP_05166616.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 3 str. 686] gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] gi|189042347|sp|A9M6K0|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365] gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] Length = 207 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis 1330] gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 1 str. 9-941] gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis biovar Abortus 2308] gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. 16M] gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis ATCC 23445] gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus S19] gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis ATCC 23457] gi|254689721|ref|ZP_05152975.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 6 str. 870] gi|254694210|ref|ZP_05156038.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 3 str. Tulya] gi|254697864|ref|ZP_05159692.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 2 str. 86/8/59] gi|254702253|ref|ZP_05164081.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 5 str. 513] gi|254708201|ref|ZP_05170029.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M163/99/10] gi|254710571|ref|ZP_05172382.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis B2/94] gi|254730754|ref|ZP_05189332.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 4 str. 292] gi|256032065|ref|ZP_05445679.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M292/94/1] gi|256045157|ref|ZP_05448056.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. Rev.1] gi|256061587|ref|ZP_05451728.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella neotomae 5K33] gi|256114108|ref|ZP_05454862.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 3 str. Ether] gi|256160261|ref|ZP_05457955.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M490/95/1] gi|256255467|ref|ZP_05461003.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti B1/94] gi|256257972|ref|ZP_05463508.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 9 str. C68] gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260169200|ref|ZP_05756011.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. F5/99] gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99] gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|68053010|sp|Q57BY2|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053226|sp|Q8YIG3|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153128|sp|Q8FZE8|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893347|sp|Q2YLX6|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042348|sp|B0CHX4|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736287|sp|B2S6Z6|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801037|sp|C0REH1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis 1330] gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella abortus bv. 1 str. 9-941] gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308] gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445] gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19] gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457] gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99] gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28] gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90] Length = 207 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498] Length = 208 Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 88/189 (46%), Positives = 129/189 (68%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFHKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDF 179 Query: 180 TIATIVAPI 188 TIATI AP Sbjct: 180 TIATIAAPA 188 >gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella henselae str. Houston-1] gi|71153119|sp|Q6G2L2|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1] Length = 206 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 132/189 (69%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S KDI ++++ F Sbjct: 1 MS-KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ TL I K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTVATLAIDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 +K+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVNPVIQDRDF 179 Query: 180 TIATIVAPI 188 TIATIVAP Sbjct: 180 TIATIVAPA 188 >gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp. MZ1T] gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp. MZ1T] Length = 200 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 101/182 (55%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + A RD G G++R LR+ G+IP I+YG + +P+++ ++ L + F ++ Sbjct: 2 QIEFKATKRDAQGTGASRRLRRAGRIPGILYGGAGETQPVSMDHNELYHLLRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++++ + + +D Q P ++H DF +++ G + + VP+ F+ + +P +K G Sbjct: 62 LSIEVDGAKQNAVLRDVQWHPFKQQVLHLDFQRIAAGEKMHLKVPLHFVGADVAPAVKLG 121 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G ++ +E+ + C ++P+ I VDL+ L+ G S+H+ I+LP + + + + Sbjct: 122 GCMISHTINELDVQCLPTDLPEFIEVDLSALEAGQSVHVSQIKLPAGVELVQHGEGDPVV 181 Query: 182 AT 183 AT Sbjct: 182 AT 183 >gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] Length = 204 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ L A RD GKG++R LR+ G+IPAI+YG P+ + + +I K L + F Sbjct: 1 MSQETFALDAARRDDQGKGASRRLRREGRIPAIVYGGDEAPQSVTILHNEILKHLEHEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I + VI +D P +++HADF +VS ++ V VP+ F+N+ S G Sbjct: 61 YSHVLELNIDGKTSKVILRDLHRHPYKPLIMHADFQRVSANQSLRVTVPLHFLNKETSVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 K GG +NV+ E+ + C AN +P+ I VD+ DL IG SIH+ I++P + Sbjct: 121 AKAGGIVNVILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQIKMPAGVRIHALMLGE 180 Query: 176 QLNITIATIVAPI 188 ++ + I AP Sbjct: 181 DHDVGVVAIHAPK 193 >gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus metallidurans CH34] gi|166223709|sp|Q1LRQ2|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus metallidurans CH34] Length = 203 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G ++ + +++ + C ++P+ I VDL ++ +IH+ D++LP+ ++++ N IA Sbjct: 121 GIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SITLPAGA 188 >gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum anthropi ATCC 49188] gi|166223698|sp|A6WZE3|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum anthropi ATCC 49188] Length = 209 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V H+V L+ PAN IP+++ DL L+IGDS+H+ I+LP+ + ++ + Sbjct: 120 IKRGGVLNIVRHDVELIVPANAIPEALEFDLTGLEIGDSVHISAIKLPKGVTAAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C] Length = 208 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 88/189 (46%), Positives = 129/189 (68%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDF 179 Query: 180 TIATIVAPI 188 TIATI AP Sbjct: 180 TIATIAAPA 188 >gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium meliloti 1021] gi|307305661|ref|ZP_07585408.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] gi|307317664|ref|ZP_07597103.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|71153163|sp|Q92N68|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021] gi|306896822|gb|EFN27569.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|306902364|gb|EFN32960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] Length = 204 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 98/187 (52%), Positives = 136/187 (72%), Gaps = 2/187 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A RD+VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ F Sbjct: 1 MS-ETYELKAETRDRVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG Sbjct: 60 MTTVATIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +KQGG LN+V HEV L A+NIP+S+TVDL LKIGD++H+ +++LP + + + + Sbjct: 120 LKQGGALNIVRHEVELNVSADNIPESLTVDLTGLKIGDTVHISNVKLPAGATPVIADRDF 179 Query: 180 TIATIVA 186 T+ATI Sbjct: 180 TVATITG 186 >gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] Length = 209 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 81/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R GKG+AR +R+ G+IPA++YG P PI+L K ++ +++ +F+TTI Sbjct: 6 TLAATVRSGTGKGAARSVRREGRIPAVLYGGGEAPLPISLDKKVTTQLIFAGHFLTTIFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + IP+DYQLD V D +H DFL++ GS + V+VPV FIN++ +PGIK+GG Sbjct: 66 LDIDGKKERAIPRDYQLDVVKDFPLHVDFLRLKPGSRLKVNVPVHFINQDAAPGIKRGGS 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 LN+V H V + PA+NIP++IT DL + DS+H+ I LPE + N T+A++ Sbjct: 126 LNIVYHTVEMWVPADNIPEAITADLAGMDFNDSLHISAIPLPEGCKPTNPDKNFTVASLA 185 Query: 186 APISG 190 P G Sbjct: 186 PPAGG 190 >gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium medicae WSM419] gi|166223724|sp|A6UBR5|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium medicae WSM419] Length = 207 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 134/187 (71%), Gaps = 2/187 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ F Sbjct: 1 MS-ETYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + + V+PKDYQLDPV D +H DFL+V +GS V+V VPVRF NE KSPG Sbjct: 60 MTTVATIDVDGKKIRVLPKDYQLDPVRDFTMHVDFLRVKKGSQVSVQVPVRFENEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +KQGG LN+V HEV L A+NIP+ +TVDL LKIGD++H+ ++ LP + + + + Sbjct: 120 LKQGGALNIVRHEVELNVSADNIPEFLTVDLTGLKIGDTVHISNVELPAGATPVITDRDF 179 Query: 180 TIATIVA 186 T+ATI Sbjct: 180 TVATIAG 186 >gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia solanacearum GMI1000] gi|71153161|sp|Q8Y2E2|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum GMI1000] Length = 206 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL +L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLPKGVTIVTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|254714754|ref|ZP_05176565.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M644/93/1] gi|254717815|ref|ZP_05179626.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M13/05/1] gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] Length = 207 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLLVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha JMP134] gi|109893384|sp|Q476G0|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134] Length = 203 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 108/185 (58%), Gaps = 3/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG +DPK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAADPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VD+ ++++G ++H+ D++LP+ + ++ N IA Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTDLKLPKGVTVVTHGDENPAIA 180 Query: 183 TIVAP 187 +I P Sbjct: 181 SISLP 185 >gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT] gi|122985595|sp|Q1H3J2|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT] Length = 207 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R+ G ++R LR+ G +P ++YG + + + K++ + F +IL Sbjct: 3 ITIKATKREGKGTSASRRLRRAGNVPGVVYGGDKEAVSLEFNHKELFLEFRHETFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ + V+ +DYQL PV + + H DF +VS V V VP+ FIN + +PG+K G Sbjct: 63 NLEVDGQKEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPLHFINADIAPGVKLAG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G + + E + C ++P+ I VDL++L+ G SIH+ I+LP + + + Sbjct: 123 GIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKLPNGVEFVQLAHDNDAAV 182 Query: 182 ATIVAPI 188 A+I P Sbjct: 183 ASISKPR 189 >gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola sp. HTCC2999] Length = 209 Score = 234 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 6/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PAI+YG +P + L+ + + + F Sbjct: 1 MSEAIFNLEAQVRTDLGKGASRRLRHADKVPAILYGADKEPVSLTLAHNKLMQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTLD+ E V + KD Q P ++H DFL+V V +VPV FINE +P Sbjct: 61 YSHVLTLDVDGEKVEALVKDMQRHPYKPKILHVDFLRVDASKAVHTNVPVHFINEETAPA 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK QGG +E+ + C + +P+ I VDL ++++G ++H+ DI LPE SS+ Sbjct: 121 IKTQGGHAEHHVNEIEVSCLPSQLPEFIEVDLTNVELGQTLHLSDITLPEGVSSIELAKG 180 Query: 175 SQLNITIATIVAPIS 189 ++ + TI A Sbjct: 181 ESHDLAVVTIKAAKG 195 >gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1] gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1] Length = 228 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 124/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR+ G++PA+IYG +P I + K++ K+L + +FM +I+ Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTTIHVEEKELVKQLMTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++G E + +PKD L PV+D HADF ++S + V V +PV F+ E +SPG+K+GG Sbjct: 65 KIEVGGETIRTLPKDVALHPVTDRPTHADFFRLSRDAKVEVQIPVVFVGEEQSPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATI 184 LNVV HE+ L+C A+ IP I + + ++GDSIH+ ++ LPE SS++ + TIAT+ Sbjct: 125 VLNVVRHELDLICEADKIPGEIEISVEGKEVGDSIHISEVNLPEGSVSSITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21] gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21] Length = 230 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 76/185 (41%), Positives = 125/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR++G++PA+IYG +P I + AK++ K+L + +FM +I+ Sbjct: 5 LTLPAETRERAGKGASRALRRDGRVPAVIYGGKEEPILIHVEAKELVKQLGTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++G + + +PKD L PV+D H DF ++ +G + V VPV F NE SPG+K+GG Sbjct: 65 TIELGGKKIKTLPKDVSLHPVNDRPEHVDFFRMVKGGKIEVQVPVVFTNEEASPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 LNVV HE+ L+C + IP I +D+ ++GDSIH+ +++LP + +++ + TIAT+ Sbjct: 125 VLNVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISEVKLPAGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] Length = 228 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 106/196 (54%), Gaps = 7/196 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A RD+ G ++R LR+ G++PAI+YG +D +PI L + L F Sbjct: 1 MSM-SFTIEAEKRDEQGSSASRRLRRAGKLPAILYGGENDAQPITLDHNAMVHNLKHDAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+ + + I +D Q P + H D L+VS + VHVP+ F NE + G Sbjct: 60 YSHILTVKLDGKSEKAILRDVQRHPFKPTIYHVDLLRVSANQPIRVHVPLHFHNEEECKG 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K GG ++ + +++ + C ++P+SI +D+ ++ +GD+IH+ +++LP+ S+ Sbjct: 120 VKLGGGMVSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHISELKLPKGVESVALMHG 179 Query: 175 SQLNITIATIVAPISG 190 + + +++ P + Sbjct: 180 DDYDYAVVSVLLPRAA 195 >gi|254719568|ref|ZP_05181379.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. 83/13] gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] Length = 207 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 91/190 (47%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++ P+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKPPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha H16] gi|122947171|sp|Q0KEP9|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16] Length = 205 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 ELEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VDL +++ ++H+ DI+LP+ + ++ N +A Sbjct: 121 GIVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSDIKLPKGVTVITHGDDNPAVA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SISQPAGA 188 >gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CMR15] Length = 206 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 108/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL +L+IG ++H+ D++L + + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLSKGVTIVTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] Length = 207 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 122/186 (65%), Gaps = 1/186 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F+T I Sbjct: 4 SYELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITIPVKETTITLHKGGFLTHI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +D+ E VI KD+QL PV D ++H DFL+VS+GST+TV VPV F+NE PGIK+G Sbjct: 64 GMIDVDGEKHQVIAKDFQLHPVRDDVMHVDFLRVSKGSTLTVEVPVHFLNEETCPGIKKG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN+V H V + PA+NIP+++ +DL + GDS+H+ ++LPE ++ + TIAT Sbjct: 124 GVLNIVRHTVEMNVPADNIPEALEIDLAKAQPGDSLHISAVKLPEGCQPTITDRDFTIAT 183 Query: 184 IVAPIS 189 I AP Sbjct: 184 IAAPAG 189 >gi|114319446|ref|YP_741129.1| 50S ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] gi|122312594|sp|Q0ABZ8|RL25_ALHEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114225840|gb|ABI55639.1| LSU ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] Length = 214 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 108/191 (56%), Gaps = 5/191 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KL A +R + G+G++R LR+ ++PAI+YG +P+ I L+ + + + + F Sbjct: 1 MSAIEMKLDAELRTETGRGASRRLRRAKRVPAIMYGGHQEPQAITLNLLQLDRLMQEEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+++ + VI KD Q P ++ H D +V G V VPV F+NE+K+PG Sbjct: 61 YSQILTVNLDGKSEQVIVKDLQRHPFKPLVEHVDLQRVVAGEKVHTSVPVHFVNEDKAPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 IK GG ++ +E+ + C ++P+ + VD++ L++G +IH+ D+ LP + Sbjct: 121 IKAGGIIHHDLNEIEIACLPKDLPEYLEVDVSALELGSAIHLSDVPLPAGVEIPELVQGA 180 Query: 176 QLNITIATIVA 186 + + +I A Sbjct: 181 DHDHPVVSIHA 191 >gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12J] gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12D] gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] gi|226736355|sp|B2UER5|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12J] gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12D] gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] Length = 208 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIADLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] Length = 203 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 108/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK + L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKLVELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A + P Sbjct: 181 ANLSVPAG 188 >gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] Length = 209 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L+A RD GKG++R LR + +PAI+YG DP+ IA++ + K L ++ F Sbjct: 1 MSTEDFTLNAKARDDQGKGASRRLRHDNLVPAIVYGGEKDPQNIAIAQNEFVKHLENEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL + E VI KD Q P L+HADFL+VS +T VP+ FINE G Sbjct: 61 YSHIVTLVVDGEKQDVILKDLQRHPAKAQLLHADFLRVSRTQKLTTRVPLHFINEESCKG 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 +K QGG + E+ + C ++P+ I VDL D ++G +H+ D+ LP S++ Sbjct: 121 VKLQGGVVAHSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHISDLNLPAGVESVALSHG 180 Query: 176 -QLNITIATI 184 + + TI Sbjct: 181 EDHDQAVVTI 190 >gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium sp. BNC1] gi|123057768|sp|Q11GC6|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1] Length = 210 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 95/190 (50%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q +L+A R++VGKGSAR +R+NG+IPA+IYG+ P I L K++ R+++ F Sbjct: 1 MSQ-SYELTAEARERVGKGSARAIRRNGKIPAVIYGDKQPPLSITLPYKEVFLRIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+D+ E + V+PKDYQLDPV +H DFL+V + + VTV+VPV FIN+ K+PG Sbjct: 60 RTTVATIDLNGEKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 IK+GG LN+V HEV CPAN IPD I VDL L IGDS+H+ ++LPE +++ + Sbjct: 120 IKRGGVLNIVRHEVEFTCPANAIPDFIEVDLTGLDIGDSVHISAVKLPEGIVPTITDRDF 179 Query: 180 TIATIVAPIS 189 TIAT+ AP Sbjct: 180 TIATVAAPAG 189 >gi|83644562|ref|YP_432997.1| 50S ribosomal protein L25/general stress protein Ctc [Hahella chejuensis KCTC 2396] gi|109893366|sp|Q2SLA2|RL25_HAHCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83632605|gb|ABC28572.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hahella chejuensis KCTC 2396] Length = 208 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A RD GKG++R LR+ +G++P IIYG + P I++S +S L ++ Sbjct: 1 MSN-EFSLNAEKRDVQGKGASRRLRRVDGKVPGIIYGGETAPVAISVSHNQLSHALQNEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTLD+ VI KD Q P I++HADFL+V + + V+VP+ FINE+K Sbjct: 60 FYSHILTLDVEGTNESVILKDLQRHPYKPIIMHADFLRVQKDQKLHVNVPLHFINEDKCE 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G++Q GG ++ EV ++C N+P+ I VD+ +++ +H+ D++LPE Sbjct: 120 GVRQGGGSISHQQTEVEVICLPANLPEFIEVDMTSVQVEQILHLSDLKLPEGVELAELTK 179 Query: 175 -SQLNITIATIVAPISG 190 S ++ + + P Sbjct: 180 GSDHDLPVVAVHKPKGA 196 >gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter sp. 1501(2011)] Length = 225 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 111/195 (56%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + R GKG++R LRK +PAIIYG +P IA+ ++ K L ++ Sbjct: 1 MSDILYTVNGIARTDDQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKNNELWKLLENE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILT+++ E + KD Q P +HADF ++ +G + +++PV F+ ++ Sbjct: 61 AFFSNILTINLDGEEHLAVIKDLQRHPSKGFPMHADFQRIVKGQKINMNIPVHFVGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS----M 174 PGIK GG L+ + ++ ++C + +P+ + VD++ L+IG+S+H+ DI+LPE + Sbjct: 121 PGIKAGGILSTLVTDIEIVCLPSALPEYLEVDVSGLEIGESLHLTDIKLPEGVIIFELDV 180 Query: 175 SQL-NITIATIVAPI 188 + + T+ + AP Sbjct: 181 DEPVDRTVVNMQAPT 195 >gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter litoralis HTCC2594] gi|122544539|sp|Q2NAN1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594] Length = 229 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 80/185 (43%), Positives = 124/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR+ G++PA+IYG +P I + K + K+L + +FM +I+ Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTMIHVEEKLLIKQLMTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++IG + V +PKD L PVSD HADF ++++G + V VPV F+NE SPG+K+GG Sbjct: 65 EIEIGGKTVRTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPVVFMNEEASPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 LNVV HE+ L+C + IP I +D+ ++GDSIH+ +I LPE + +++ + TIAT+ Sbjct: 125 VLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISEITLPEGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium nodulans ORS 2060] gi|254801055|sp|B8IFN5|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium nodulans ORS 2060] Length = 211 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 84/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F+TT+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLTTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-GK 126 ++G + IP+DYQLDPV D+ +H DFL+V+ G TV V VPV F+N++ +PG+KQ G Sbjct: 67 EVGGRKIRAIPRDYQLDPVKDLPLHVDFLRVTAGQTVAVEVPVHFVNQDAAPGLKQKSGM 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V+L + IPD+I VDL IGD+IH+ D+ LP S + T+AT+V Sbjct: 127 LNVVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSDLALPAGASLALDPSETVATLVP 186 Query: 187 PI 188 P Sbjct: 187 PT 188 >gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae] Length = 202 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR+ GQ P I+YG + P IA+ + L + F ++IL Sbjct: 1 MKVIAFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I ++ V+ +D+Q+ +++H DF +V + VP+ F+N SP +K G Sbjct: 61 DLEIEGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ V E+ + C N+P+ I VDL L +G SIH+ D++LP ++++Q N+TIAT Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA 180 Query: 185 VAPIS 189 P Sbjct: 181 TVPAG 185 >gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc [Saccharophagus degradans 2-40] gi|109893392|sp|Q21FL7|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40] Length = 210 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 7/196 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L+A RD GKG++R LR+ G +PAI+YG +P+ + ++ ++++K L ++ Sbjct: 1 MSNEDFILNAEARDVSGKGASRRLRREAGLVPAIVYGGRKNPQNVTITLRELTKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+TL+IG VI KD Q P ++ +HADFL+VS+ VP+ FINE S Sbjct: 61 FYSHIITLNIGDSSEQVILKDLQRHPATNFAMHADFLRVSKTKKFNTKVPLHFINEATSK 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K QGGK+ E+ + C ++P+ I VDL ++++G +H+ DI LP+ S++ Sbjct: 121 GVKEQGGKVQHSMTELEIACLPADLPEFIEVDLANVELGGIVHISDIVLPKGVESIALQQ 180 Query: 176 --QLNITIATIVAPIS 189 ++ +A+I P Sbjct: 181 GEDHDLPVASIFKPKG 196 >gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella silvestris BL2] gi|254801056|sp|B8EK41|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella silvestris BL2] Length = 227 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 123/189 (65%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+A R GKG+AR +R+ G+IP +IYG +PI L ++++K +Y+ +F Sbjct: 1 MA-ETKTLAAAARHGTGKGAARSVRREGRIPGVIYGGGDPAEPITLDYRELNKLIYAGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TT+ +D+ VIP+DYQLDP+ D+ +H DFL++ G+++ V VPV F+N+ PG Sbjct: 60 LTTLFEIDVAGTKQRVIPRDYQLDPIKDLPLHVDFLRLKPGASLKVEVPVHFLNQETCPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 +K+GG +N+V H + L PA++IP++IT DL +L+I DS+H+ + LP+ + + Sbjct: 120 VKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSLHLTALALPQGCRPTQRERDF 179 Query: 180 TIATIVAPI 188 TI TI P+ Sbjct: 180 TIVTITPPL 188 >gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] Length = 208 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K +SK L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLSKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++ + V +PKD PV+D +HADFL+VSE +TV V+VPVRF NE+ +PG Sbjct: 60 FNSVVMVEVNGKAVRTLPKDVAFHPVTDRPLHADFLRVSEHATVNVNVPVRFENEDAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 +K+GG LNVV H+V L+ A NIP+ + VDL ++GDSIH+ + LP+ +++ + Sbjct: 120 LKKGGVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSIHISAVTLPKGAKTAIDDRDF 179 Query: 180 TIATIVAPIS 189 TIATIVAP + Sbjct: 180 TIATIVAPSA 189 >gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [polymorphum gilvum SL003B-26A1] gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1] Length = 200 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 118/190 (62%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F Sbjct: 1 MAA-SYELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITVPIKESTLNLHKGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +T I +D+ E VI KDYQL PV D L+H DFL+VS +T+TV +PV F+N+ PG Sbjct: 60 LTHIGVIDVDGEKHQVIAKDYQLHPVRDELMHIDFLRVSANTTLTVDIPVHFLNQETCPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V H V + PAN IP+ I +DL +GDS+H+ + LP+ ++ + Sbjct: 120 IKRGGVLNIVRHAVEMTVPANAIPEFIELDLAKADLGDSLHISAVALPKGCQPTITDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia indica subsp. indica ATCC 9039] gi|226736280|sp|B2IG64|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia indica subsp. indica ATCC 9039] Length = 221 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 80/189 (42%), Positives = 127/189 (67%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +++ L+A +R GKG+AR +R+ G+IP +IYG P+PI L ++++K +Y+ +F Sbjct: 1 MAERK-TLAATVRGGTGKGAARSIRREGRIPGVIYGGGDAPEPITLDYRELNKLIYAGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI +++ V+P+DYQLDPV +H DFL++ G+T+ V VP+ FIN + PG Sbjct: 60 LTTIFDIEVEGAKQRVVPRDYQLDPVKGQPLHVDFLRLKPGATLKVSVPIHFINADICPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K+GG LN+V H + L PA+ +PD +T DL+ L+I +S+H+ I LPE S + + + Sbjct: 120 LKKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSAITLPEGCSLVATDRDF 179 Query: 180 TIATIVAPI 188 TIATIV P+ Sbjct: 180 TIATIVPPV 188 >gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] Length = 207 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A RD+VGKG+AR LR+ G +PA+IYG+ +PI + K+ + L+ F Sbjct: 1 MAT-SYELKASARDRVGKGAARALRREGLLPAVIYGDKKPAQPITIPVKETTLTLHKGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +T I T+DI E VI KDYQL PV D ++H DFL+VS+ +T+TV +PV FINE PG Sbjct: 60 LTHIGTIDIDGEKHQVIAKDYQLHPVRDDVLHVDFLRVSKNTTLTVDIPVTFINEETCPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LNVV H V L PAN IP+++ DL + IGD++H+ LPE ++ + Sbjct: 120 LKKGGMLNVVRHTVELQVPANAIPETLVFDLAKVDIGDTLHISATDLPEGAQPTITDRDF 179 Query: 180 TIATIVAPISG 190 T+AT+ AP G Sbjct: 180 TVATLAAPGGG 190 >gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc [Dinoroseobacter shibae DFL 12] gi|189042354|sp|A8LRY8|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dinoroseobacter shibae DFL 12] Length = 211 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P ++YG +DP+PI + ++ +RL + F Sbjct: 1 MAGEIPDLVAEPRAGTGKGAARQARRDGYVPGVVYGGGADPQPIQIKFNELLRRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M T+ L + E V VI ++ Q D V D+ H D +++ S V + +PV FINE +P Sbjct: 61 MATLFNLKVEGQEDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLFIPVEFINEGAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L A +IP+SITVDL L IGD++ + + LPE + + Sbjct: 121 GIKKGGVLTAVRPEVELRVTAGDIPESITVDLTGLDIGDTVTISSVTLPEGATPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIQAPSG 190 >gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium vitis S4] gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4] Length = 200 Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGS+R LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHASYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPIAITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ E + V+PKDYQLDPV D +H DFL+VS S VTV VPVRF+NE+KS Sbjct: 61 MTTVATIEVNGEKIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVNEDKS-A 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K G LN+V H+V L PANNIP++IT DL LKIGDS+H+ ++LP + + + + Sbjct: 120 VKTGAVLNIVRHDVELQVPANNIPEAITFDLEGLKIGDSVHISAVKLPSGVTPVITDRDF 179 Query: 180 TIATIVAP 187 TIAT+VAP Sbjct: 180 TIATLVAP 187 >gi|239996494|ref|ZP_04717018.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii ATCC 27126] Length = 210 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 6/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEANFKLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L +++ ++V V+ KD Q P + H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLEINLDGKVVEVLVKDMQRHPFKPKITHIDFQRVIAGQDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 +K GG E+ + C N+P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCLPKNLPEFIEVDMAGVEMGQTLHLSDLTLPAGVSSVELAKND 180 Query: 175 SQLNITIATIVAPISGS 191 ++ + T+ + Sbjct: 181 EAHDLAVVTVKPAPKAA 197 >gi|307292917|ref|ZP_07572763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] gi|306880983|gb|EFN12199.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] Length = 204 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++G + V +PKD PVSD +HADFL+VSE +TV V+VPV F NE+ SPG Sbjct: 60 FNSVVFVEVGGKKVRTLPKDVAFHPVSDRPLHADFLRVSEHATVHVNVPVVFKNEDASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NI 179 +K+GG LN+V HEV L+ A IPD + VDL L +G++IH+ ++LP+ + + Sbjct: 120 LKKGGVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETIHISAVKLPKGAKAAHDETDF 179 Query: 180 TIATIVAPIS 189 T+ATIVAP + Sbjct: 180 TVATIVAPSA 189 >gi|308050540|ref|YP_003914106.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307632730|gb|ADN77032.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 210 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 7/196 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q A +R ++G G++R LR+ ++PA++YG P I L +++ + F Sbjct: 1 MSQ--FTFDAEVRTEIGTGASRRLRRAERLPAVLYGADEAPVAITLDHNKVNQAQELEAF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + IL L+I + V I K Q P L+H DF +V G +T VP+ FINE S G Sbjct: 59 YSQILILNIDGKKVEAIVKAMQRHPYKPKLLHIDFQRVKRGEAMTATVPLHFINEEDSAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 ++ GG + + +EV++ C ++P++I VD +L G+++H+ D++ P+ S Sbjct: 119 VRAGGTVMHLVNEVTIRCLPQDLPENIEVDTLNLNTGETLHLSDLKTPKGVEFPNLEAGS 178 Query: 176 QLNITIATIVAPISGS 191 ++++ +I P GS Sbjct: 179 DNDLSVVSIQPPKGGS 194 >gi|329897177|ref|ZP_08271917.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] gi|328921332|gb|EGG28726.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] Length = 210 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 112/198 (56%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +++ R +GKG++R LR+ +P ++YG DP +++ +KDI K L ++ Sbjct: 1 MSD-QFEVAVSARSDIGKGASRRLRRLENLVPGVVYGGHKDPVSVSVVSKDIEKSLENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LTL+ G + KD Q P ++ ++H DFL+V G + V VP+ F NE+ Sbjct: 60 FYSHVLTLNFGDHTESAVLKDLQRHPATNKVVHLDFLRVVAGEAIKVQVPLHFTNEDTCK 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K GG + E+ + C +IP+ I VD+ ++++G +H+ D+ LP+ +S+ Sbjct: 120 GVKIGGGMVQHQMTEIEVSCLPKDIPEFIEVDMTNVEVGAIVHLSDLTLPKGVTSVALSL 179 Query: 175 -SQLNITIATIVAPISGS 191 + ++ +A++ P G+ Sbjct: 180 GADHDLAVASVTPPKGGA 197 >gi|85713257|ref|ZP_01044282.1| Ribosomal protein L25 [Idiomarina baltica OS145] gi|85692926|gb|EAQ30899.1| Ribosomal protein L25 [Idiomarina baltica OS145] Length = 220 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P + L ++ + F Sbjct: 1 MAKLDFNIKATVRTDKGKGASRRLRHADKVPAILYGGKDEPIALELDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILTL+I + I KD Q P L H DF +V +G + HVP+ F+NE + G Sbjct: 61 YSHILTLEIDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTHVPLHFLNEETAKG 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K +GG + ++V ++ ++P+ + VD+ +L +GD+IH+ D+ LPE + Sbjct: 121 VKDEGGVVVHHVNDVEIMVLPKDLPEYLEVDIANLSVGDTIHLTDLNLPEGVELVELTKG 180 Query: 175 SQLNITIATIVAPI 188 + + +I AP Sbjct: 181 EDHDQAVVSITAPR 194 >gi|331005803|ref|ZP_08329161.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] gi|330420384|gb|EGG94692.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] Length = 213 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 7/198 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L A R+ GKG++R LR+ +P IIYG P+ I+L KD+ K L ++ Sbjct: 1 MSNEDFVLHAESRELTGKGASRRLRRESSMVPGIIYGGSKKPQMISLLQKDLIKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+++++ VI KD Q P ++ H D L+VS+ T VP+ FINE S Sbjct: 61 FYSHIISVEVDGAAQDVILKDLQRHPAKPLIYHLDLLRVSKTKKFTTRVPLHFINEETSK 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K QGG ++ E+ + C ++P+ I VDL D++IG ++H+ D+ LP+ S+ Sbjct: 121 GVKVQGGMISHSVTELEISCLPADLPEYIEVDLADVEIGQTVHISDLTLPKGVESVQLSH 180 Query: 175 -SQLNITIATIVAPISGS 191 ++ +A+I P + Sbjct: 181 GHDHDLPVASINKPKGAA 198 >gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S] gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S] Length = 204 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 82/190 (43%), Positives = 128/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++G + V + KD PV+D +HADFL+VSE +TV V+VPV F NE+ SPG Sbjct: 60 FNSVVFVEVGGKKVRTLAKDVAFHPVTDRPLHADFLRVSEHATVHVNVPVIFKNEDASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NI 179 +K+GG LN+V HE+ L+ A IPD + +DL L +GDSIH+ ++LP+ + + Sbjct: 120 LKKGGVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGAVKLPKGAKAAHDETDF 179 Query: 180 TIATIVAPIS 189 T+ATIVAP + Sbjct: 180 TVATIVAPSA 189 >gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] Length = 227 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 125/190 (65%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L+A RD+VGKG+AR LR+N +PA+IYG+ DP IAL K+ + +++ F Sbjct: 1 MS-EDNTLTAQARDRVGKGAARELRRNNMVPAVIYGDKKDPLSIALPRKETTLAIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+L +++ + V+PKDYQL PVSD+++H D L+VS + VTV +PV F+NE + G Sbjct: 60 MTTLLDIEVDGKKHKVLPKDYQLHPVSDVVMHVDLLRVSAKTAVTVEIPVVFLNEEECIG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K GG LNVV V + CPAN+IPD+ +DL IGDS+++ + +PE ++ + Sbjct: 120 LKAGGTLNVVRFTVEVNCPANSIPDNFEIDLTSYDIGDSVNISAVDMPEGAEPTITDRDF 179 Query: 180 TIATIVAPIS 189 TIATI P Sbjct: 180 TIATIATPAG 189 >gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter aquaeolei VT8] gi|166223694|sp|A1U373|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8] Length = 212 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q + + A RD GKG++R LR+ +IPAIIYG D P+A+ ++ K + ++ Sbjct: 1 MSQ-DFVIEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILT+DI + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P Sbjct: 60 FFSHILTVDIQGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAP 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 +K QGG ++ EV ++C N+P+ I VDLN++++ +H+ D++LP+ + Sbjct: 120 AVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKVAALQQ 179 Query: 176 --QLNITIATIVAPISG 190 ++ +A+I P Sbjct: 180 GEDHDLPVASIHKPKGA 196 >gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] Length = 206 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 108/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R GKG++R LR +G++PA+IYG + I + D+ +L + F +IL Sbjct: 3 IEISADKRTLQGKGASRRLRGSGKVPAVIYGGDQAAQSIEMDHNDLFHKLKLEAFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 TL + + V+ +D Q+ P ++H DF +V + + + VP+ FIN SPG+K G Sbjct: 63 TLSVAGKKEPVLLRDVQMHPFKKQVLHVDFQRVDKNKKIHMKVPLHFINAEISPGVKTSG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G + + EV + C ++P+ I+VDL +L G ++H+ D+ LP+ +++ N+ + Sbjct: 123 GIVTHILTEVDITCLPGDLPEFISVDLAELTAGHTLHLSDLVLPKDVETVALAKGDNLPV 182 Query: 182 ATIVAPIS 189 ATIV P S Sbjct: 183 ATIVIPRS 190 >gi|332140914|ref|YP_004426652.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] gi|226736275|sp|B4RSW4|RL25_ALTMD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|327550936|gb|AEA97654.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] Length = 210 Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 7/198 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEAIFNLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V V+ KD Q P ++H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLTLNLDGKPVEVLVKDMQRHPYKPKIMHIDFQRVIAGEDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 +K GG E+ + C ++P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCQPKDLPEFIEVDMAAVEMGQTVHLSDLTLPAGVSSVELAKND 180 Query: 175 SQLNITIATIV-APISGS 191 ++ + T+ AP + Sbjct: 181 EAHDLAVVTVKPAPKAAE 198 >gi|312797356|ref|YP_004030278.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] Length = 205 Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ P I+YG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNAGKTPGIVYGAGTEPKLIELDHNALYHALNKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I V+ +D Q P +++H DF +V + +TV VP+ ++N+ SP +K G Sbjct: 61 DLEIAGATEQVLLRDVQYHPFRRLVLHVDFQRVDAKTKITVKVPLHYMNQEGSPAVKLGG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNITI 181 G + V +E+ + C N+P+ I VDL + ++ S+H +D++LP + Q N I Sbjct: 121 GVITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKDVKLPAGVELTPHVEQENPVI 180 Query: 182 ATIVAPISG 190 + P Sbjct: 181 VSATLPAGA 189 >gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter sp. PRwf-1] gi|172048580|sp|A5WHA5|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1] Length = 224 Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 112/195 (57%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + R + GKG++R LRK +PAIIYG +P IA+ ++ K L ++ Sbjct: 1 MSDILYTVNGITRTNDQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKKNELWKLLENE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILT+++ E + KD Q P +HADF ++ +G + + +P+ F ++ Sbjct: 61 AFFSNILTINLEGEEHLAVIKDLQRHPSKGFAMHADFQRIVKGQKINMQIPLHFTGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS----M 174 PGIK GG L+ + ++ ++C +N+P+ + VD+++L+IG+S+H+ DI+LPE + Sbjct: 121 PGIKAGGILSTLVTDIEIVCLPSNLPEFLEVDVSNLEIGESLHLTDIKLPEGVVIFELDV 180 Query: 175 SQL-NITIATIVAPI 188 + + T+ + AP Sbjct: 181 DEPVDRTVVNMQAPT 195 >gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas wittichii RW1] gi|166223725|sp|A5V625|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1] Length = 207 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 121/182 (66%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LSA R++ GKG++R +R+ G++PA+IYG +P I + K + K L++ +F +++ L Sbjct: 7 LSAEARERAGKGASRAIRREGRVPAVIYGEKQEPASIHVEEKVLMKLLHTGHFFNSVVML 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+G + V +PKD Q PV+D +H DFL++ E + V V+VPV F +E SPG+K+GG L Sbjct: 67 DVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEHTKVNVNVPVHFKDEELSPGLKRGGVL 126 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 NVV H++ L A IP+ I + L L++G+SIH+ + LP+ S+ +ITIATIVAP Sbjct: 127 NVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIHLSQVALPKGASAQDHEDITIATIVAP 186 Query: 188 IS 189 + Sbjct: 187 SA 188 >gi|119897045|ref|YP_932258.1| 50S ribosomal protein L25/general stress protein Ctc [Azoarcus sp. BH72] gi|166223661|sp|A1K3G6|RL25_AZOSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119669458|emb|CAL93371.1| 50S ribosomal protein L25 [Azoarcus sp. BH72] Length = 200 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +A R+ G ++R LR+ Q+P IIYG D +PI L ++ L + F ++ Sbjct: 2 TIEFNATKREGQGSSASRRLRRAAQVPGIIYGAGKDAQPITLDHNELYHLLKKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++++ V+ +D Q ++H DF +V + + VP+ F+N + +P +K G Sbjct: 62 LSINVEGAKETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFVNGDNAPAVKLG 121 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G + V E+ + C +++P+ I VDL L+ G SIH+ ++LP ++ + + + Sbjct: 122 GNIIAHVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKLPAGVEAVHHGEGDPVV 181 Query: 182 AT 183 A+ Sbjct: 182 AS 183 >gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] Length = 227 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 81/183 (44%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R GKG+AR +R+ G+IP +IYG P P++L K+++K +Y+ +F+TTI Sbjct: 6 KLAAAVRSGTGKGAARSVRREGRIPGVIYGGGDAPTPLSLDQKELTKLIYAGHFLTTIFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + IP+DYQLD V D +H DFL++ GS + + VPV FIN SPG+K+GG Sbjct: 66 LDIDGKTERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLRIDVPVHFINHEASPGLKRGGS 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 LNVV H V + PA+NIPD IT DL L+ D++H+ LP + N T+ +I Sbjct: 126 LNVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAFTLPPNCKPTNPDKNFTVVSIT 185 Query: 186 API 188 P+ Sbjct: 186 PPL 188 >gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC) rplY [Thiomonas sp. 3As] gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] Length = 205 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR+ G+ P IIYG P+ I L + L + F +++L Sbjct: 1 MKVVAFERSLQGTGASRRLRRAGKTPGIIYGGEQAPQMIELDHNALYHALKKEQFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L+I + V+ +DYQ+ P +++H DF +V G +++ VP+ F SP +K Sbjct: 61 QLEIAGKSSQVLLRDYQMHPFKQLVLHVDFQRVDAGHKISMKVPLHFTGAENSPAVKLSH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 G +N V EV + C + +P+ I VDL++L + S+H+ D++LP+ S ++ N + Sbjct: 121 GLVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVNDLKLPKGVSVLTHGVDNPAVV 180 Query: 183 TIVAP 187 T+ P Sbjct: 181 TVSPP 185 >gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] Length = 201 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++A R G G++R LR+ G +PAI+YG DP+ +++S ++ K L + F + + Sbjct: 4 SFEVNAQPRTGTGTGASRRLRRTGLVPAIVYGAHQDPEMVSVSHNELLKHLEHEAFYSHV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L +G ++ V+ KD Q P ++H DF++VS+ + + VP+ F+NE+ G+K G Sbjct: 64 LDLKVGDDVTKVVLKDMQRHPAKPFILHVDFMRVSQDEKLKMVVPLHFLNEDTCKGVKLG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G ++ EV ++C ++P+ I VD+ +++IG +H+ ++ LPE + + + Sbjct: 124 GVVSHTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSELALPEGVALAHAPDPDEPVV 183 Query: 183 TI 184 I Sbjct: 184 VI 185 >gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] Length = 219 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 85/180 (47%), Positives = 122/180 (67%), Gaps = 2/180 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A R+KVGKG+AR LR+NG IPA+IYG+ DP PIA+ K+ L++ F Sbjct: 1 MS-ETFTVKAEAREKVGKGAARHLRRNGMIPAVIYGDKQDPLPIAIPYKETFLALHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MT + T+++ + + V+PKDYQL+PV D L+H DFL+VSE + VTV++PV F NE SPG Sbjct: 60 MTHVATIEVNGQKISVLPKDYQLEPVRDFLMHVDFLRVSEKTRVTVNIPVHFENEEASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG +NVV HEV + PA+ IP+ T+DL L+IGDSIH + LP+ ++ + Sbjct: 120 LKRGGVINVVRHEVEVHAPASAIPEYFTLDLTGLEIGDSIHASALTLPKNVEVTITDRDF 179 >gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] Length = 230 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 111/187 (59%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +++A +R+ G G++R LR G+ P ++YG + + + +K++ + + F +IL Sbjct: 3 IQINANVRELKGTGASRRLRHAGKTPGVLYGGDKEATSLEIDSKELFMQFRHEAFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 TL++ + VI +D+Q+ PV + ++H DF +++E ++V VP FINE +PG+K +G Sbjct: 63 TLNLAGKKEAVILRDFQMHPVRNNIVHIDFQRINENEKISVKVPFHFINEETAPGVKLEG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ + E+ + C ++P I VD++ L IGDSIH+ ++++PE + + + I Sbjct: 123 GLISHIMTEIDISCLPKDLPQYIEVDMSALSIGDSIHLSEVKVPEGVELTTLSDENDPAI 182 Query: 182 ATIVAPI 188 +I P Sbjct: 183 TSISKPK 189 >gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] Length = 215 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ Sbjct: 1 MSN-EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTL + V + +D Q P +H D L+V + +T++VP+ FINE S Sbjct: 60 FYSHILTLKLDGASVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMNVPLHFINEESSI 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K+ GG++ EV + C ++P+ I VD+ + ++ IH+ D++LP+ Sbjct: 120 GVKKQGGEIQHNYAEVEVSCLPQHLPEFIEVDMANAELETVIHLSDLKLPKGVELTQLAL 179 Query: 175 -SQLNITIATIVAPI 188 + +A + P Sbjct: 180 GDDHDQPVAAVHQPK 194 >gi|56476200|ref|YP_157789.1| 50S ribosomal protein L25/general stress protein Ctc [Aromatoleum aromaticum EbN1] gi|68053040|sp|Q5P723|RL25_AZOSE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56312243|emb|CAI06888.1| 50S Ribosomal protein L25 [Aromatoleum aromaticum EbN1] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + G G++R LR+ GQIP IIYG +D + I + ++ L + F ++ Sbjct: 2 QIVFKATQRVEQGTGASRRLRRAGQIPGIIYGADTDAQAITVDHNELYHLLKKETFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++ V+ +D Q P ++H DF ++ G + + VP+ FIN + +P +K G Sbjct: 62 LMIELEGAKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFINNDTNPAVKLG 121 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G ++ E+ + C N+P+ I VDL L+ G SIH+ ++LPE ++ + + + Sbjct: 122 GCMISHTMTELDIACLPANLPEFIEVDLQSLEAGQSIHVSQLKLPEGVEAVHHGEGDPVV 181 Query: 182 ATIVAPISGS 191 AT + G+ Sbjct: 182 ATALTVKGGA 191 >gi|332993707|gb|AEF03762.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas sp. SN2] Length = 210 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 6/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSKAIFTLDATVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNAADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V V+ KD Q ++H DF +V G + +VP+ FINE+KS Sbjct: 61 YSHVLTLNVDGKAVEVLVKDMQRHAFKPRILHVDFQRVIAGQELHTNVPLHFINEDKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 IK GG +E+ + C ++P+ I VD+ ++++ ++H+ D+ LP +S+ Sbjct: 121 IKAGGIAEHHVNEIEITCLPKDLPEFIEVDIANVEMDSTLHLSDLTLPAGITSVELGKDD 180 Query: 175 SQLNITIATIVAPISGS 191 ++ + T+ + Sbjct: 181 ETHDLAVVTVKPAPKAA 197 >gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] Length = 205 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 1/184 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + +L A R+ GK + R LR +P I+YG P +AL + + + + +F++T Sbjct: 3 EVIELKAQAREGTGKLANRALRAKKLVPGIVYGGEKGPANVALEYRHVWQHYQTGHFLST 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + VIP+D Q+DPV D IH DFL+VS+ S + V +PV F+NE SPG+K+ Sbjct: 63 VYLLDIDGKKERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIEVEIPVHFVNEEASPGLKR 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIA 182 GG LN+V H V L CPA++IP+ ITVDL IGDSIH+ ++LP + ++ + T+A Sbjct: 123 GGALNIVRHAVELSCPADSIPEFITVDLTGYDIGDSIHISAVKLPAGITPTITDRDFTVA 182 Query: 183 TIVA 186 TI Sbjct: 183 TIAG 186 >gi|153876444|ref|ZP_02003761.1| Ribosomal protein L25 [Beggiatoa sp. PS] gi|152067092|gb|EDN66239.1| Ribosomal protein L25 [Beggiatoa sp. PS] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 107/195 (54%), Gaps = 7/195 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ K+ A +R + GKG R LRK G +PAIIYG +P + LS D+ ++L + F + Sbjct: 1 MEQFKIEAQLRTERGKGENRRLRKAGYVPAIIYGGDKEPISLTLSHNDLLRQLEHEAFYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ILT++I + + KD P ++H DF +VSE + VP+ FINE+KS G+K Sbjct: 61 RILTVNIDDQPEQAVLKDLHRHPYRPTILHLDFQRVSEAQKLYREVPLHFINESKSVGVK 120 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------S 175 GG ++ EV + C ++P+ I VDL ++ + D++H+ D+ L E + + Sbjct: 121 LGGGLVSHHLAEVEIRCFPKDLPEFIEVDLTEINLNDTVHLSDLVLSEGVEIVALISKDA 180 Query: 176 QLNITIATIVAPISG 190 N+ +A++ P Sbjct: 181 SRNLPVASVNLPRGA 195 >gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira multiformis ATCC 25196] gi|109893371|sp|Q2YBH3|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 112/188 (59%), Gaps = 4/188 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R+ GKG++R LR +G++P IIYG + +PI L ++ +L + F +I Sbjct: 2 QIEISAEKRELQGKGASRRLRGSGKVPGIIYGGENPAQPIELDHNNLYHQLKLEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 LT+ + + V+ +D Q+ P ++H DF +V+ + + VP+ FINE+ +PG+K Sbjct: 62 LTMSVEGQKEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLHFINEDIAPGVKLA 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS---SMSQLNIT 180 GG ++ V E+ + C ++P+ I+VD+ +L G++IH+ +++LPE M ++ Sbjct: 122 GGLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEGVEIPALMKGEDLP 181 Query: 181 IATIVAPI 188 +ATI P Sbjct: 182 VATIAIPR 189 >gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25/general stress protein Ctc [Dechloromonas aromatica RCB] gi|109893357|sp|Q479M1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB] Length = 203 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 1/173 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L+A R G G++R LR ++P I+YG + P+ I + D+ +L + F ++I Sbjct: 2 QFELNAQARTLQGTGASRRLRHAAKVPGIVYGGAAAPQSIEVDHNDLLLKLKKEAFHSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L I + V+ +D Q+ +++H DF +V + V VP+ F+NE +PG+K Sbjct: 62 INLIIDGKKEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFVNEEVAPGVKLN 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 GG +N V EV + C A ++P+ I VDL+ LKIG SIH+ ++LP+ + Sbjct: 122 GGLVNHVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPKGVKIVHH 174 >gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter arcticus 273-4] gi|109893382|sp|Q4FVB4|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4] Length = 224 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 9/196 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+AV R + GKG++R LRK +PAIIYG P I++ ++ K L + Sbjct: 1 MTINHFALNAVDRSAEVQGKGASRRLRKQNLVPAIIYGGGEQPIAISIKINELVKSLEFE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILTL++ E V+ KD Q P +HADF +V +G + ++VPV F ++ Sbjct: 61 AFFSHILTLNVDGEEHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 PG K GG L+ + ++ ++C + +P+ + +D++ ++IGD + DI+LPE + L+ Sbjct: 121 PGTKAGGILSTLVTDIEIVCIPSQLPEYLEIDVSGMEIGDLFRLSDIKLPEGV-IIFDLD 179 Query: 179 I------TIATIVAPI 188 + TI + P Sbjct: 180 MEDAHDRTIVNMQPPT 195 >gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax borkumensis SK2] gi|123050701|sp|Q0VS83|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2] Length = 214 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ Sbjct: 1 MSN-EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTL + V + +D Q P +H D L+V + +T+ VP+ F NE S Sbjct: 60 FYSHILTLKLDGADVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMSVPLHFTNEESSI 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K+ GG++ EV + C ++P+ I VD+ + ++ +H+ D++LP+ Sbjct: 120 GVKKQGGEIQHNFAEVEVSCLPQHLPEFIEVDMANAELDSVVHLSDLKLPKGVELTQLAL 179 Query: 175 -SQLNITIATIVAPI 188 + +A + P Sbjct: 180 GEDHDQPVAAVHQPK 194 >gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 81/187 (43%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + LSA R++VGKG++R+LR+ G+ PA+IYG+ +P I + K +++ L + +F + Sbjct: 3 ETLHLSAETRERVGKGASRVLRREGRTPAVIYGDNQEPVAIHVEEKALARALGTGHFFNS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I+ L +G +V +PKD PV+D HADFL+++ V V VPV FINE SPG+K+ Sbjct: 63 IVELTVGGTVVRTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPVVFINEEASPGLKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIA 182 GG LN+V HE+ L+ ++IPD ITVD+ L++G SIH++DI +P ++ + TIA Sbjct: 123 GGVLNIVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAGVKVVTHEADATIA 182 Query: 183 TIVAPIS 189 TIVAP + Sbjct: 183 TIVAPSA 189 >gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] Length = 220 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + ++ A +R+ GKG++R LR+ G++PAIIYG DP+ + L KDI K L ++ Sbjct: 1 MSD-QFEVQAELREDTGKGASRRLRRLAGKVPAIIYGGDKDPQSLTLVRKDIEKSLENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +L +++ E+ I KD Q P + ++HADFL++ E + V+VP+ F+NE Sbjct: 60 FYSQVLEVNVAGEVQKAILKDLQRHPAKNNVMHADFLRIDEKVAIKVNVPIHFLNEEDCA 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K +GG + ++ + C +IP+ I VD+ ++ G IH+ ++ LPE +S++ Sbjct: 120 GVKMEGGMIQHQATDIEVSCLPGDIPEYIEVDMLEVITGQIIHLSEVTLPEGVTSVALSL 179 Query: 176 --QLNITIATIVAPISGS 191 ++ IA++VAP S Sbjct: 180 GEDHDLAIASVVAPKGTS 197 >gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010] gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010] Length = 240 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 16/199 (8%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A R GKG++R LR G+IPA++YG DP I+++ + L + F IL Sbjct: 16 FEVQAEARTDEGKGASRRLRHAGKIPAVVYGADKDPVSISINHNQFLRHLDEEAFYAHIL 75 Query: 66 TLDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 TLDI + V+ KD Q P +D +IHADFL+V +T+ VPV FI E+ +PG+K G Sbjct: 76 TLDIAGKKDQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPVHFIGEDVAPGVKDG 135 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---------- 174 G+++ + EV + C ++P+ I D++ +++ S+H+ ++ LP+ S Sbjct: 136 GQVSHMITEVEIACLPQDLPEYIEADISGMEMDGSLHLTELVLPKGVSLTALTHHQEEEL 195 Query: 175 -----SQLNITIATIVAPI 188 S + +A+I P Sbjct: 196 EEGERSAYDQAVASIHMPR 214 >gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25/general stress protein Ctc [Thiobacillus denitrificans ATCC 25259] gi|109893403|sp|Q3SLR4|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259] Length = 201 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ G G++R LR G++P I+YG + P I L + L + F ++ Sbjct: 2 EIEVIASKRELQGTGASRRLRHAGKVPGIVYGGSTAPVQIELDHNALYHALRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L+L + V+ +D Q P ++H DF +V + + V VP+ F+N SPG+K Sbjct: 62 LSLSVDGAKESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFLNAEVSPGVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNIT 180 GGK + + +E+ + C ++P+ I VD+ L++G SIH D+ LP ++ N Sbjct: 122 GGKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPAGVELVAHVKQENPA 181 Query: 181 IATIVAPISG 190 +A I AP G Sbjct: 182 VAVIHAPKGG 191 >gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] Length = 202 Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +++AV RD G G++R LR G +P ++YG D P+ ++AK++ + + F ++L Sbjct: 3 IEINAVKRDAKGTGASRRLRHAGSVPGVVYGGGKDAYPLEINAKELFLQFRHEAFHASVL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 TL I + V+ +D+Q+ PV + + H DF +VS + V VP F N + +PG+K G Sbjct: 63 TLIIEGKKESVLLRDFQMHPVRNTIQHVDFQRVSATEKIHVKVPFHFTNADAAPGVKLGG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G + + E + C A ++P+ I VD++ L++G SIH+ I+LP+ + + + Sbjct: 123 GIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQIKLPKGVEFVQLAHGDDAAV 182 Query: 182 ATIV 185 A+I Sbjct: 183 ASIA 186 >gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio japonicus Ueda107] gi|226736293|sp|B3PJN6|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107] Length = 203 Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 108/198 (54%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ KL A R+ +GKG++R LR+ Q+PAIIYG P +++S ++ K L + Sbjct: 1 MS-EDFKLDATARNDLGKGASRRLRRLADQVPAIIYGGSKAPVNVSVSHNELLKHLQHEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ L+I VI KD Q P ++H DFL+V + + + VP+ FINE S Sbjct: 60 FFSHVIDLNIDGTSESVILKDVQRHPSKAQVLHLDFLRVDKNTKLHKQVPLHFINEATSV 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K QGGK+ ++ + C ++P+ I VDL ++ G +H+ D++LP+ S Sbjct: 120 GVKTQGGKVVHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHISDLKLPKGVISTDLTK 179 Query: 176 --QLNITIATIVAPISGS 191 ++ + TI+ G Sbjct: 180 GADHDLAVVTILKAKGGE 197 >gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter cryohalolentis K5] gi|109893383|sp|Q1QED5|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5] Length = 224 Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+AV R + GKG++R LRK +PAIIYG P I++ ++ K L + Sbjct: 1 MTINHFALNAVDRSAELQGKGASRRLRKQNLVPAIIYGGGEQPTAISIKINELVKSLEFE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILTL++ E V+ KD Q P +HADF +V +G + ++VPV F ++ Sbjct: 61 AFFSHILTLNVDGEEHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 PG K GG L+ + ++ ++C + +P+ + +D++ ++IGD + DI LPE Sbjct: 121 PGTKAGGVLSTLVTDIEIVCIPSQLPEYLEIDVSGMEIGDLFRLSDITLPEGVVIAELEL 180 Query: 174 MSQLNITIATIVAPI 188 + TI + P Sbjct: 181 EDGHDRTIVNMQPPT 195 >gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] Length = 217 Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q E + A R G+G++R LR+ +IPAIIYG + I++ ++ K L ++ Sbjct: 1 MSQ-EFLIEAFPRGDQGRGASRRLRREERKIPAIIYGGKKEATAISIWHNELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILT+++ + VI KD Q P +L HADFL+V + + V+VP+ F+NE +P Sbjct: 60 FFSHILTIELEGKKESVILKDLQRHPYKPLLTHADFLRVDKDHEIHVNVPLHFLNEESAP 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 IK QGG N +EV ++C N+P+ + VD+ +++ +H+ D++LP+ + Sbjct: 120 AIKLQGGVANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVHLSDLKLPKGVRIAALLQ 179 Query: 176 --QLNITIATIVAPISG 190 ++ + I P + Sbjct: 180 GEDHDLPVVAIHKPRAA 196 >gi|56460038|ref|YP_155319.1| ribosomal protein L25 [Idiomarina loihiensis L2TR] gi|68053046|sp|Q5QV04|RL25_IDILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56179048|gb|AAV81770.1| Ribosomal protein L25 [Idiomarina loihiensis L2TR] Length = 221 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P +AL ++ + F Sbjct: 1 MAELDFNIQATVRTDKGKGASRRLRHEDKVPAILYGGQGEPIALALDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL+ + I KD Q P L H DF +V +G + ++P+ F+NE + G Sbjct: 61 YSHIVTLEFDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTNLPLHFLNETTAKG 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K +GG + ++V + ++P+ + VD+ +L +GD+IH+ D++LP+ + Sbjct: 121 VKEEGGVVVHHVNDVEITVLPKDLPEYLEVDIAELSVGDTIHLTDLKLPKGVELVELTKG 180 Query: 175 SQLNITIATIVAPI 188 + + +I AP Sbjct: 181 EDHDQAVVSITAPR 194 >gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides 2.4.1] gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17029] gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides KD131] gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] gi|109893390|sp|Q3IZM8|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223710|sp|A3PMM1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801059|sp|B9KMG3|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1] gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029] gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131] gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] Length = 203 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P I+YG +P I + D+ RL F Sbjct: 1 MAGEIPDFQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVPYNDLLNRLKKGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L + E V VI + Q D V D+ H DF+++ S V + + V F N +K+P Sbjct: 61 LQTLFNLKVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRVNLFIHVTFENHDKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD +TVDL D +IGD IH+ DI+LPE N Sbjct: 121 GLKRGGTLTVVRPEVELEVTAGDIPDHLTVDLTDRQIGDVIHINDIKLPEGAVPTINRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17025] gi|166223711|sp|A4WPE3|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025] Length = 203 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P I+YG +P I + D+ RL F Sbjct: 1 MAGEIPDFQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVKYNDLLNRLKKGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L + E V VI + Q D V D+ H DF+++ S + + + V F N +++P Sbjct: 61 LQTLFNLKVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRINLFIHVTFENHDQAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD ITVDL +IGD IH++DI LPE N Sbjct: 121 GLKRGGTLTVVRPEVELEVTAGDIPDHITVDLTGKQIGDVIHIQDIALPEGAVPTINRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 493] gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii Dugway 5J108-111] gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 331] gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuG_Q212] gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuK_Q154] gi|71153140|sp|Q83AP1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042351|sp|A9KF12|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042352|sp|A9NAT6|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736301|sp|B6J9D8|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736302|sp|B6J329|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493] gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111] gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331] gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212] gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154] Length = 244 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 107/193 (55%), Gaps = 5/193 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +R+ GK +AR +R+ ++P +YG P+ I L KD+ K L S++ Sbjct: 1 MAAESFELIAELREFTGKSAARRMRRFEDKVPGTVYGAGKAPQSITLLQKDLLKALESES 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ILTL +G + VI K Q ++H DF ++ + ++VP+ F+ E+ P Sbjct: 61 TFSSILTLKVGDKKQKVILKALQRHHTKPKIVHIDFQRIKASEKLIMNVPLHFLGEDDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G++ GG ++ + EV + C ++P+ I VDL+ L++ +S+H+ +++LP S Sbjct: 121 GVEAGGVVSHLQSEVEIRCLPADLPEYIEVDLSHLQLDESVHLSNLKLPAGVGLTSAVDE 180 Query: 176 QLNITIATIVAPI 188 + + IA++ P Sbjct: 181 EHDSPIASVHMPR 193 >gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium sp. 4-46] gi|226736339|sp|B0UGY1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium sp. 4-46] Length = 217 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 115/182 (63%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F++T+ + Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLSTVFEI 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-GK 126 + + IP+DYQLDPV D +H DFL+V G T+ V VPV F+N++ +PG+KQ G Sbjct: 67 AVDGRTIRAIPRDYQLDPVKDTPLHVDFLRVVSGQTIEVEVPVHFVNQDAAPGLKQKSGT 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H ++L + IPD++ VDL IGD++H+ D+ LP S + T+AT+V Sbjct: 127 LNVVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSDLVLPTGASLALAPSETVATLVP 186 Query: 187 PI 188 P Sbjct: 187 PT 188 >gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] Length = 216 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 113/198 (57%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A R +GKG++R LR+ ++ I+YG + P P+ + +I K ++ Sbjct: 1 MSG-EFMLNAETRKDLGKGASRRLRRLENKVLGIVYGGKNKPTPVTFAMNEIVKLAENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F T+++ L++ + V+ KD Q P + ++H DFL+VS + +T+ VP F NE+ Sbjct: 60 FFTSLVDLNLDGKSEQVVIKDMQRHPARETIMHVDFLRVSAKTKITMQVPFHFTNEDTCH 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K +GG ++ +++ + C ++P+ I VD+ LK+GD++H+ D+ LP+ S++ Sbjct: 120 GVKIEGGSVSHALNDIEITCLPKDLPEYIEVDMAALKVGDNVHLSDLVLPKGVESVALAH 179 Query: 176 --QLNITIATIVAPISGS 191 ++ ++ + AP G Sbjct: 180 GEDHDLLVSAVNAPRGGG 197 >gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] Length = 241 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M + +L+AV+R + GKG++R LRK +PAI+YG +P IA+ ++ K L ++ Sbjct: 1 MSNQTFELNAVVRGDELQGKGASRRLRKQNLVPAIVYGADKEPASIAIRYNELIKSLETE 60 Query: 59 NFMTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +F + ILT+++ + V+ K Q P + +HADF ++ G + + VPV ++ Sbjct: 61 SFFSHILTINVEGQGTEEVVIKALQRHPAKNTPMHADFQRIVRGQAMHITVPVHYVGAED 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---- 173 +PG K GG E+ + + IP+ +TVD++ + +GDSIH+ DI+LPE + Sbjct: 121 APGHKAGGIFVSNATELEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQLPEGVAIRELE 180 Query: 174 MSQL-NITIATIVAPI 188 +++ N T+AT+ AP Sbjct: 181 VTEPFNRTVATMQAPT 196 >gi|256821850|ref|YP_003145813.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] gi|256795389|gb|ACV26045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] Length = 229 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +A +R +GKG++R LR+ QIPAI+YG +PK I+L+ I L + Sbjct: 1 MSEYTFNAELRSDMGKGASRRLRREADQIPAIVYGGKEEPKSISLNHNQIINMLDEEAVY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++I+ LDI ++ V+ KD Q ++H D ++ G + +V + FINE +PG+ Sbjct: 61 SSIIKLDIAGKVEEVVIKDIQRHAYKPKVLHMDLKRIVRGEIMNANVALHFINEKSAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----QL 177 K GG ++ V + C N+P+ I VDL L+IG++IH+ D++LPE + + Sbjct: 121 KAGGIVSHQVTSVEVACRPRNLPEYIEVDLGALEIGETIHLSDLKLPEGVELTALQGEEH 180 Query: 178 NITIATIVAPISGS 191 ++++A IV P S Sbjct: 181 DLSVANIVRPSGPS 194 >gi|304311481|ref|YP_003811079.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] gi|301797214|emb|CBL45434.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] Length = 206 Score = 222 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 111/192 (57%), Gaps = 7/192 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 L+A +R +GKG++R LR+ G +IPAIIYG + P I + K++ K L ++ F + Sbjct: 4 SFVLNASLRTDLGKGASRRLRRAGTEIPAIIYGGDAAPATITVVYKELVKALENEAFYSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 +LTL++ V V+ KD Q P + HADF++V + + VP+ F+NE+K G+K Sbjct: 64 VLTLNLDGNAVQVVLKDLQRHPARNTPTHADFMRVDATRKIQMVVPLHFVNEDKCVGVKT 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQL 177 QGG ++ EV + C A ++P+ + VD+ L +G +IH+ DI+LP + + + Sbjct: 124 QGGAISHQLSEVLISCLAKDLPEFLEVDVAGLALGHAIHLADIKLPAGVNIVELSLGADH 183 Query: 178 NITIATIVAPIS 189 N+ + ++ P Sbjct: 184 NLPVVSVYLPRG 195 >gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] Length = 205 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 7/186 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 1 MKVIAYTRAEIGTGASRRLRAAGMAPGIVYGGTSEPVNIKLDHNALFYALKREAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ +D+Q+ +++H DF +V +TV VP+ FINE+ SP K G Sbjct: 61 DLEIDGKAEKVLLRDFQVHAYKPLVLHVDFQRVDANQKITVKVPLHFINEDASPAAKS-G 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN------I 179 ++ E+ + C N+P I VDL +L +G +IH+ D++LPE S+ S Sbjct: 120 VVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKLPEGVSATSHDESQPIVSA 179 Query: 180 TIATIV 185 T+A + Sbjct: 180 TVANVA 185 >gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] Length = 211 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +SA R++VGKGSAR R+ G +PA+IYG+ +P I +S ++I+K ++ +L Sbjct: 5 TTISAEQRERVGKGSARAARRAGLVPAVIYGDKKEPLGINMSTREITKIVHQPGIFGRLL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + V+ +D Q PVSD ++H DFL+VS V V VPV FINE+ P +K GG Sbjct: 65 EIVVDGKKSTVLTRDIQFHPVSDTILHMDFLRVSGSVKVAVGVPVEFINEDLCPALKIGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 LNVV HE+ L CPA +IP+ I +DL+ LKIGDSIH+ I LP+ ++ + T+AT+ Sbjct: 125 VLNVVRHEIELNCPATDIPEKIIIDLDGLKIGDSIHISAITLPDGVEPTITDRDFTVATL 184 Query: 185 VAPISG 190 +P G Sbjct: 185 QSPGGG 190 >gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium HTCC2083] gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium HTCC2083] Length = 218 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P II+G +DP PI + + K L + F Sbjct: 1 MAGEVPDFHAEVRTGTGKGAARQARRAGMVPGIIFGGDADPLPINVPFNVLLKALKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+L + + + V VI +D Q V D+ H DF+++ + + + +PV FINE +P Sbjct: 61 KSTLLNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPVEFINEEAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L+ A +IP+ +TVD+ L +GD+I++ DI LP + Sbjct: 121 GIKRGGVLTTVRPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A + AP Sbjct: 181 VVANLSAPSG 190 >gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] Length = 221 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L R GKG+AR R++G +P ++YG +P+ I + + K+L F Sbjct: 1 MAGKIPDLELTPRAGTGKGAARQARRDGLVPGVVYGGGEEPQAITIPFNILFKKLKDGGF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + + V + + Q V D+ H DFL++ S + +++PV F+NE S Sbjct: 61 MSTLFNLKVEGSDDVRAVCRGVQRHVVKDLPTHIDFLRLKRDSRINMNIPVHFLNEETSA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+K+GG L +V EV L+ A NIPD I DL +L+IG++I++ DI LPE T + + + Sbjct: 121 GLKKGGTLTIVRAEVELMVTAGNIPDYIEADLENLEIGETINISDITLPEDTRPVIADRD 180 Query: 179 ITIATIVAPIS 189 IA I AP Sbjct: 181 FVIANIAAPGG 191 >gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas europaea ATCC 19718] gi|71153155|sp|Q82TQ5|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718] Length = 198 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 4/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R G G+ R LR G++P +IYG D + I L KD+ +L + F +I Sbjct: 2 QIEISANSRKLHGTGANRRLRSQGRLPGVIYGGNGDAQSIELDHKDLYYKLKMEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L++ I + V+ +D Q+ P ++H DF +V + + V VP+ FIN + +PG+K Sbjct: 62 LSISIDGKKEQVLLRDVQMHPFKQQVLHIDFQRVRQDQKIHVKVPLHFINADIAPGVKLS 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNIT 180 GG ++ V E+ + C ++P+ ITVDL+ + G ++H+ D+ L E + N+ Sbjct: 122 GGMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSDLILSENVEIPALLKGDNLP 181 Query: 181 IATIVAPIS 189 +AT++A Sbjct: 182 VATLIAKRG 190 >gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine bacterium HP15] Length = 223 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q E + A RD G+G++R LR+ +IPAIIYG D PIA+ ++ K L ++ Sbjct: 8 MSQ-EFVIEAFPRDDQGRGASRRLRREERKIPAIIYGGNKDATPIAIWHNELKKALENEA 66 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LT+++ + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P Sbjct: 67 FFSHVLTVELNGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAP 126 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 IK GG N +EV ++C N+P+ I VD+ +++ +H+ D++LP+ + Sbjct: 127 AIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTTVEMDQVVHLSDLKLPKDVKIAALLQ 186 Query: 176 --QLNITIATIVAPISG 190 ++ + I P Sbjct: 187 GEDHDLPVVAIHKPRGA 203 >gi|83313447|ref|YP_423711.1| ribosomal protein L25 [Magnetospirillum magneticum AMB-1] gi|109893368|sp|Q2VZ23|RL25_MAGMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82948288|dbj|BAE53152.1| Ribosomal protein L25 [Magnetospirillum magneticum AMB-1] Length = 202 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F Sbjct: 1 MS-EAIAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGF 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T + +D+GK+ + +D Q+ PV+D IH DF++VS + V VPV F NE KSP Sbjct: 60 FTQLFNVDLGKDGKHLCLARDVQMHPVTDQPIHVDFMRVSADHAIHVKVPVHFTNELKSP 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN- 178 GIK+GG LNV HE+ + C N+IP I +DL+ L+IG SIH+ D++LP + Sbjct: 120 GIKKGGVLNVELHEIEITCSPNDIPHEILIDLDGLEIGASIHLSDLKLPAGAKPYHVASG 179 Query: 179 ITIATIVAPI 188 T+A+I AP Sbjct: 180 ATVASIAAPT 189 >gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 7169] gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 12P80B1] gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 103P14B1] gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC1] gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC7] gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC8] gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis O35E] gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis CO72] Length = 223 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 8/194 (4%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M Q L+ V R + GKG++R LRK+ +PAIIYG + I + +I K L ++ Sbjct: 1 MSQ--FTLNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEIVKALSNE 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +F ++++T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S Sbjct: 59 SFFSSVITINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSS 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G K+GG L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + + ++ Sbjct: 119 VGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDE 178 Query: 176 -QLNITIATIVAPI 188 LN TIAT+ P Sbjct: 179 ADLNRTIATMQPPA 192 >gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37] gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37] Length = 209 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G +P I + + KRL F Sbjct: 1 MAGEIPDLQAQERTGTGKGAARAARRDGMVPGIVFGGDKEPLAINIPFNVLLKRLKQGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H DF+++ S V + +PV FINE +P Sbjct: 61 KSTLFNLQVEGHEDVRVICRDVQRDIVKDLPTHVDFMRLRRTSKVNLFIPVEFINEETAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI++GG L VV EV L+ A +IP+ + VDL +++IGD +H+ D+ LPE + + N Sbjct: 121 GIRKGGVLTVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDVTLPEGSKATIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|109898884|ref|YP_662139.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudoalteromonas atlantica T6c] gi|123360668|sp|Q15SQ3|RL25_PSEA6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109701165|gb|ABG41085.1| LSU ribosomal protein L25P [Pseudoalteromonas atlantica T6c] Length = 213 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PA++YG + + LS + + + F Sbjct: 1 MSEGIFTLDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ Sbjct: 61 YSHVLTLNVDGKKVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAES 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK GG +V + C ++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 121 IKTHGGHAEHHMVDVEISCLPADLPEFIEVDVTNVELGQTLHLSDIALPEGVTSVELAKG 180 Query: 175 SQLNITIATI 184 ++ + T+ Sbjct: 181 EDHDLAVVTV 190 >gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter crescentus NA1000] gi|71153131|sp|Q9AAV8|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801041|sp|B8GZU9|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000] Length = 197 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 101/186 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD G G+AR R+ G++P ++YG P IA+ A + K LY+ + + Sbjct: 3 EIILNVEVRDGAGTGNARATRRAGKVPGVLYGGGKAPVNIAVKANEFRKSLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI K Q PV+D +H D +V E + + VPV F N S G+K+G Sbjct: 63 VTLQYGEEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V+ H V L CPA+ IP+ + +DL IGD I + +++LPE + IA + Sbjct: 123 GTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGVKPAMDRDFVIANV 182 Query: 185 VAPISG 190 A + Sbjct: 183 KASSAA 188 >gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis L13] Length = 197 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 116/185 (62%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R+ +G G AR R++G +P ++YG+ + K I++ + I+K LY F + + Sbjct: 5 VTIEAQPREALGTGGARATRRDGLVPGVVYGHNKENKFISIDPRSIAKELYKPGFFSRLF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + HV+ KD QL PVSD +H DF++VS+ S + V++PV IN++K+PG+K+GG Sbjct: 65 ALSVNGNTEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPVHVINDDKAPGVKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 +N+V H + ++CPA++IP I VDL + G ++H+ DI+LP + + + T+ +I Sbjct: 125 MVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQLPAGVVAAHPERDNTLVSI 184 Query: 185 VAPIS 189 VAP Sbjct: 185 VAPAG 189 >gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] Length = 216 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ A +R GKG++R LR+ G++P ++YG + I+L KD+ K + + Sbjct: 1 MSD-SFEVQAQVRVDEGKGASRRLRRLEGKVPGVVYGGEAAAISISLIRKDLEKMMEQET 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F ++L +++ + I KD Q P +H DFL+V + V+VP+ F NE+ Sbjct: 60 FYASVLNVNVDGSVETAILKDVQRHPAKGFPMHVDFLRVQADKAIKVNVPLHFTNEDVCH 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K GG + ++ + C +IPD I VD++ +++G +H+ D+ LP S Sbjct: 120 GVKMGGGMVQHQATDMEVQCLPGDIPDYIEVDMSAVELGQIVHLSDVTLPAGVESTALAL 179 Query: 175 -SQLNITIATIVAPIS 189 ++ IA+++AP Sbjct: 180 GDDHDLAIASVIAPRG 195 >gi|332306083|ref|YP_004433934.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173412|gb|AEE22666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 213 Score = 220 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 103/190 (54%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PA++YG + + LS + + + F Sbjct: 1 MSEGIFTLDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ Sbjct: 61 YSHVLTLNVDGKKVEAVVKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAES 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK GG +V + C N++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 121 IKTLGGHAEHHMVDVEISCLPNDLPEFIEVDVANVELGQTLHLSDIALPEGVTSVELAKG 180 Query: 175 SQLNITIATI 184 ++ + T+ Sbjct: 181 EDHDLAVVTV 190 >gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida KT2440] gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida KT2440] Length = 217 Score = 220 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + + Sbjct: 23 EFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHV 82 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L++ +V+ K Q P ++HADF++V G +T VPV FINE +K+G Sbjct: 83 LELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VKKG 140 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + + Sbjct: 141 GEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDKAV 200 Query: 182 ATIVAPI 188 A + AP Sbjct: 201 ANVHAPR 207 >gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 46P47B1] gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 101P30B1] Length = 223 Score = 220 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 8/194 (4%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M Q L+ V R + GKG++R LRK+ +PAIIYG + I + ++ K L ++ Sbjct: 1 MSQ--FTLNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEVVKALSNE 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +F ++++T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S Sbjct: 59 SFFSSVITINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSS 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G K+GG L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + + ++ Sbjct: 119 VGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDE 178 Query: 176 -QLNITIATIVAPI 188 LN TIAT+ P Sbjct: 179 ADLNRTIATMQPPA 192 >gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] Length = 215 Score = 220 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G DP PI + ++ KRL + F Sbjct: 1 MAGEIPDLVALERTGTGKGAARQARRDGMVPGIVFGGDKDPLPIQIPFNELFKRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H D +++ S + +++PV FINE +P Sbjct: 61 KSTLWNLKVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIALYIPVEFINEEAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+C A +IP+ ITVDL L I D + + + LP T + Sbjct: 121 GIKKGGVLTVVRPEVELVCTAGDIPEKITVDLTGLNINDVVTISSVELPNGTQPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPTG 190 >gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762455|ref|ZP_04760532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|68053039|sp|Q5NL76|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241372957|gb|EER62624.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 220 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 1/186 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A RD+ GKG++R +R+ G +PA+IYG+ + I + + K L + +FM ++ Sbjct: 4 TLNLLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAMGITVDHIALFKMLNTGHFMNSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+D+ + + IPKD Q PV+D ++H DFL+VS S V V +PV +++E KSPGIK G Sbjct: 64 VTIDVDGQKLPTIPKDVQFHPVTDRVLHVDFLRVSANSLVEVAIPVSYVDEEKSPGIKLG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIAT 183 G LN++ HE+ L A IP+ I V + L++GDSIH+ I+LPE T AT Sbjct: 124 GVLNIIHHELKLKVKATAIPEEIVVSVAGLEVGDSIHLNQIKLPEGAELAHDEHESTAAT 183 Query: 184 IVAPIS 189 ++AP Sbjct: 184 VIAPSG 189 >gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri A1501] gi|166223708|sp|A4VPC5|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501] Length = 205 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 112/191 (58%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA+IYG + P+ I++ AKD +K L ++ Sbjct: 1 MNDFTLNAQVRSDLGKGASRRLRRNAALVPAVIYGGNNAPQSISILAKDFAKLLENEASF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L L++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+ Sbjct: 61 SHVLNLNVDGQNESVLIKALQRHPAKGFVLHADFVRVVAGHKLTATVPLHFINQETSVGV 120 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 K+ GG++ +EV + C ++P+ I VD+ ++++G +HM DI+LP+ + Sbjct: 121 KKQGGEILHNLNEVEVSCMPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVALAHGS 180 Query: 178 NITIATIVAPI 188 ++ +A + AP Sbjct: 181 DLPVANVHAPR 191 >gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] Length = 220 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R G G++R LRK ++P I+YG + I L + L ++ F +IL Sbjct: 3 IEISATTRKAQGTGASRRLRKTNRVPGIVYGAG-EATMIELDHNTLYYALRNEAFHASIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 +L++ + V+ +D+Q+ P + H DF +V V + VP+ F+N + +PG+K G Sbjct: 62 SLELDGKKQSVLLRDFQMHPFRQQVQHIDFQRVDAKKKVHMKVPLHFLNADVAPGVKVGG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQLNITIA 182 G ++ V +E+ ++C ++P +I VDL+ L++G S+H+ D++LP+ + +A Sbjct: 122 GIISHVLNELEIVCLPADLPAAIEVDLSGLELGHSVHVSDVKLPKGVELAGHHHASDAVA 181 Query: 183 TIVAPIS 189 T+ P Sbjct: 182 TVQVPRG 188 >gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] Length = 209 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 1 MKIIAYTRAEIGSGASRRLRAAGMAPGIVYGGNSEPLNIKLDHNALFYALKREAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ +D+Q+ +++H DF +V + V VP+ F+NE+ S K+ G Sbjct: 61 DLEIDGKNQQVLLRDFQVHAYKPVVLHVDFQRVDANQKINVKVPLHFVNEDASSA-KKSG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++ E+ + C N+P I VDL +L+IG +IH+ D++LPE +++S Sbjct: 120 VVHHAVTELEISCLPANLPAFIEVDLGNLEIGQTIHLGDLKLPEGVTAISHDE 172 >gi|124385169|ref|YP_001027484.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10229] gi|238561329|ref|ZP_00442185.2| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] gi|254175111|ref|ZP_04881772.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|254196454|ref|ZP_04902878.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|254357505|ref|ZP_04973779.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|124293189|gb|ABN02458.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229] gi|148026569|gb|EDK84654.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|160696156|gb|EDP86126.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|169653197|gb|EDS85890.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|238524791|gb|EEP88222.1| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] Length = 240 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 34 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 93 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 94 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 153 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LN 178 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N Sbjct: 154 LSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAEN 213 Query: 179 ITIATIVAPISG 190 IA+ P Sbjct: 214 PVIASATIPAGA 225 >gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] Length = 207 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR G++PAI+YG +DP I L +I L + F +IL Sbjct: 1 MKFNATSRSDKGTSASRRLRHAGRVPAIVYGGTADPLSIELDHNEIFHALRKEAFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 + + + V+ + Q P ++H DF +V T+T VP+ FIN + SP +K G Sbjct: 61 DMQLDGKGQQVLLRAVQWHPYKPQVLHVDFQRVDAKQTITTKVPLHFINGDASPAVKLSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 ++ V E+ + C ++P +I +DL +L G ++++ DI LP+ + ++ ++ + Sbjct: 121 QIISHVMTELEITCLPVDLPQAIEIDLGELAAGGNVYLSDITLPQGVTHTVHGAEGDLVL 180 Query: 182 ATIVAPISG 190 A +A G Sbjct: 181 AAALAKRGG 189 >gi|327481913|gb|AEA85223.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri DSM 4166] Length = 205 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 114/189 (60%), Gaps = 5/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + L+A +R +GKG++R LR+ +PA+IYG P+ I++ AKD++K L ++ + Sbjct: 3 DFTLNAQVRSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASFSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 +L++++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+K Sbjct: 63 VLSMNVDGQTESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKQ 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 QGG++ +EV + C ++P+ I VD+ ++++G +HM DI+LP+ +S ++ Sbjct: 123 QGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVSLAHGSDL 182 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 183 PVANVHAPR 191 >gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum rubrum ATCC 11170] gi|109893389|sp|Q2RMV5|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170] Length = 210 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 2/185 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LSA RD+ GKG+AR R+ GQ+PA+IYG DP ++L+ + I + F + + Sbjct: 6 TLSAKGRDRAGKGAARATRREGQVPAVIYGGRQDPVLLSLAPRLIHTEMRKAGFSSRLFD 65 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + G E V+ +D Q PV+D+ IH DFL++ + + VTV +PV FINE SPG+K+GG Sbjct: 66 LTVEGGETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAIPVHFINETASPGLKRGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 LNVV HE+ + + +PD VDL ++GDSIH+ +++PE + ++ + TI TI Sbjct: 126 VLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIPEGVRPVIAERDFTICTI 185 Query: 185 VAPIS 189 AP Sbjct: 186 AAPSG 190 >gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas eutropha C91] gi|122313984|sp|Q0AGY6|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91] Length = 202 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 4/190 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R+ G G+ R LR G++P +IYG +PI L KD+ +L + F +IL Sbjct: 3 IEISANSRNLHGTGANRRLRIQGRLPGVIYGGGGTAQPIDLDHKDLYYKLKTDVFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 ++++ + V+ +D Q+ P ++H DF ++ + + V VP+ FIN + +PG+K G Sbjct: 63 SINVDGKKEQVLLRDVQMHPFKQQVLHIDFQRIRQDQKIHVKVPLHFINADIAPGVKLSG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS---SMSQLNITI 181 G ++ V E+ + C ++P+SITVDL+++ G +H D++LPE + N + Sbjct: 123 GMISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSDLKLPENVEIPALLRGDNQPV 182 Query: 182 ATIVAPISGS 191 +T++ P G Sbjct: 183 STLIMPRGGE 192 >gi|88861339|ref|ZP_01135969.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] gi|88816605|gb|EAR26430.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] Length = 200 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R ++G G++R LR+ G++PAI+YG + + L+ K++ K + F Sbjct: 1 MSNNTYTLDAELRVELGTGASRRLRREGKVPAILYGADKEAVSLVLAHKEVIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P ++ H DF +V + VP FINE K+ Sbjct: 61 YTHILTLNLNGEKVEVILKDMQRHPFKPVVTHLDFQRVDASHKIHTKVPFHFINEEKA-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 K G + EV + C N+P+ I VD+ +++G ++H+ D+ LP S+ + Sbjct: 119 TKLGATVAHHVTEVEITCLPANLPEFIEVDVATIEVGATLHLSDVALPAGVVSVELAKGA 178 Query: 176 QLNITIATIVAPIS 189 + + T+ AP Sbjct: 179 DHDQAVVTLNAPKG 192 >gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|68053026|sp|Q5GTJ0|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 204 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 110/193 (56%), Gaps = 3/193 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + R LRK G IPA++YG + + LSAK+ +K+ Sbjct: 1 MTQQEMITINAELRDVTKTKAIRSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQYKLGF 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI + + + +D Q V D + H DF V +GS + + +P+ F+NE+KSP Sbjct: 61 LSAHVIELDISGKKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQL 177 GIK GG LNV+C +++ C + IP +I VDL+ IG S+H+ D++LP + Sbjct: 121 GIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEE 180 Query: 178 NITIATIVAPISG 190 N T+ TI A SG Sbjct: 181 NFTVVTISAADSG 193 >gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] Length = 204 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+A +R GKG+AR R++G++P I+YG DP+ I + + L F Sbjct: 1 MAGQIPDLNAKVRAGTGKGAARQARRDGEVPGIVYGGGIDPQSINIPFNYLLTTLRKGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + + V V+ + Q D V D+ IH D +++ S V + +PV FIN + P Sbjct: 61 MSTLFNLKVEGQDDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVNLFIPVEFINGDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV +EV + A +IPD +TVDL + ++GD IH+ D+ LPE + N Sbjct: 121 GIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDVTLPEGAKPVIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPRG 190 >gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Gardel] gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel] gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 219 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 14 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALS 73 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + G+ Sbjct: 74 THLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGV 133 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNIT 180 K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP + + + + N T Sbjct: 134 KKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPT 193 Query: 181 IATIVAPIS 189 + TI S Sbjct: 194 LVTISGTSS 202 >gi|238028669|ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia glumae BGR1] gi|237877863|gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1] Length = 204 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERTQQGTGASRRLRNTGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 61 DLEVAGKSQSVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ L+ G S+H +DI LP + ++ N I Sbjct: 121 AVVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNGVALVAHIDAENPVI 180 Query: 182 ATIVAPISG 190 AT P Sbjct: 181 ATATIPAGA 189 >gi|170691505|ref|ZP_02882670.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] gi|170143710|gb|EDT11873.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] Length = 205 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++G + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQESNPAVKLAS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ N + Sbjct: 121 AVISHVINEIEVECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] Length = 242 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 1/186 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR R++G +PA+IYGN P+ I L ++ K++ +F +T + Sbjct: 5 ITLKATARPRAGKGAARQARRDGNVPAVIYGNQETPETINLEYNELWKQVLRGHFTSTAI 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ V+ +D Q+DP+ D +H DF +V + + V +P+ F+NE SPG+K+GG Sbjct: 65 ELDVEGTKHIVLARDVQVDPIRDTPLHVDFQRVGKDGVIRVSIPMHFVNETLSPGLKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 LN+V H+V + P + IP ++L L+IG SIH+ + +PE + + + TIATI Sbjct: 125 VLNIVRHDVEVFAPYDKIPRFFEINLEGLEIGRSIHISAVNMPEGVTPVIKNRDFTIATI 184 Query: 185 VAPISG 190 + G Sbjct: 185 AGALKG 190 >gi|307728381|ref|YP_003905605.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] gi|307582916|gb|ADN56314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] Length = 205 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQETNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ N + Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVEAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] Length = 199 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A +R GKG+AR R+ G++P I+YG+ +P I L + RL F Sbjct: 1 MAKEIETLVAEVRTGTGKGAARAARREGKVPGIVYGDGKEPLAINLDYNKLLTRLRKGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L I + V VI + Q D V D+ H DF++ S + + + V F N SP Sbjct: 61 LSTLFNLHIEGQDDVRVICRGVQKDVVKDLPTHIDFMRTHRASRINLFIHVNFDNAEASP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IPD ITVDL IGD IH+ DI LPE N Sbjct: 121 GLKRGGTLTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHINDIPLPEGCKPTIDRNF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANIAAPSG 190 >gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] Length = 199 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 103/182 (56%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD G G+AR +R+ G+IP ++YG P IA+ A + K LY+ + + Sbjct: 3 EIILNVEVRDGSGTGAARAVRREGKIPGVLYGGGKAPVNIAVRANEFRKSLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K Q PV+D +H D +V E + + VPV F N + S G+K+G Sbjct: 63 VTLQHGDEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHDISVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V+ H V L CPA+ IP+ + +DL IGD+I + +++LPE + IAT+ Sbjct: 123 GSLEVIRHTVELACPADKIPEELVIDLASHDIGDTIRISEVKLPEGVKPAVDRDFVIATL 182 Query: 185 VA 186 A Sbjct: 183 KA 184 >gi|197106324|ref|YP_002131701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] gi|226736347|sp|B4R8Q7|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] Length = 208 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 105/180 (58%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R++ G G AR R++G +P ++YG DP IA+ A + K LY+ + + Sbjct: 3 EIVLNVEVRERTGTGGARDTRRSGMVPGVLYGGDKDPVAIAVRANEFRKALYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K + PV+D H D +V E + + VPV F N++ SPG+K+G Sbjct: 63 VTLKYGNETQPVIAKAVDMHPVTDEPQHFDLYRVDEHQQIKIEVPVHFTNQDDSPGLKRG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G LNV H +++ CPA++IP+ I DL L+IG +I + D++LP K + +A++ Sbjct: 123 GTLNVALHTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKLPAKAEAAVDGETVVASV 182 >gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25/general stress protein Ctc [Maricaulis maris MCS10] gi|122316567|sp|Q0ARN7|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10] Length = 215 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+ +R+ GKG+AR R+ +P I+YG DP + L +I K L +F++ ++ Sbjct: 5 IVLTVDVREGTGKGAARAARREDLVPGIVYGGKLDPVSVTLRGNEIRKALLGGHFLSNMI 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +D + VI +D Q PVSD +H D +V E + + V+V V F NE+ P +K+GG Sbjct: 65 EIDHKGKRQTVIARDIQFHPVSDKAMHIDLYRVDEDTKINVNVAVNFTNEDACPALKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 LN+V H+V LLCPA +IP+S+ DL L IGDS+H+ I+LP+ ++ + T+AT Sbjct: 125 VLNIVRHDVELLCPAGSIPESVEADLTGLDIGDSLHISAIKLPKGVVPTITDRDFTVAT 183 >gi|76578961|gb|ABA48436.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei 1710b] Length = 223 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 17 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 76 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 77 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 136 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LN 178 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N Sbjct: 137 LSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAEN 196 Query: 179 ITIATIVAPISG 190 IA+ P Sbjct: 197 PVIASATIPAGA 208 >gi|46201115|ref|ZP_00055742.2| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 202 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F Sbjct: 1 MS-EAIAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGF 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T + +D+GK+ + +D Q+ PVSD IH DF++VS + V VPV F NE KSP Sbjct: 60 FTQLFNVDLGKDGKHLCLARDVQMHPVSDQPIHVDFMRVSADHAIHVKVPVHFTNEAKSP 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN- 178 GIK+GG LNV HE+ + C +IP I +DL+ ++IG S+H++D++LP + Sbjct: 120 GIKKGGVLNVELHEIEITCSPEDIPHEILIDLDGMEIGASVHLKDLKLPAGAKPYHVASG 179 Query: 179 ITIATIVAPI 188 T+A+I AP Sbjct: 180 ATVASIAAPT 189 >gi|325524744|gb|EGD02726.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. TJI49] Length = 201 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEISPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ + + N + Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLTAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|254447756|ref|ZP_05061221.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] gi|198262536|gb|EDY86816.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] Length = 224 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 114/188 (60%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ +GKG++R LR+ ++PA++YG+ DP + LS ++ + ++ F + IL Sbjct: 5 FVIKAQVREDLGKGASRRLRRADKLPAVLYGSG-DPVSLTLSHAEMILMVENEAFFSHIL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 LDI + I +D Q P ++L H DF +V G +TV VPV FINE S G+K +G Sbjct: 64 ELDIDGNKENAIVRDMQRHPFKNLLTHIDFQRVVAGQEITVSVPVHFINEETSKGVKLEG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNI 179 G+++ + E+ ++C ++P+ I VD+ +L +G+++H+ D+++PE S++ + + Sbjct: 124 GEVHHLMTEIEVVCMPRHLPEYIEVDIAELGLGETLHLSDLKMPEGVKSVALSHGEEHDD 183 Query: 180 TIATIVAP 187 + +I P Sbjct: 184 GVVSITKP 191 >gi|254251379|ref|ZP_04944697.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] gi|124893988|gb|EAY67868.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 65 DLEVAGKSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAETSPAVKLSS 124 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP + ++ N I Sbjct: 125 AVISHVATEIEVECLPAALPEFLEVDLSKIEAGQSVHAKDIALPNGVALVAHIDAENPVI 184 Query: 182 ATIVAPISG 190 A+ P Sbjct: 185 ASATVPAGA 193 >gi|332528605|ref|ZP_08404587.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] gi|332041921|gb|EGI78265.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] Length = 218 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 93/171 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG +P I L + L + F ++IL Sbjct: 1 MKFVAFERAKQGTGASRRLRHTGRTPGIVYGGTVEPSLIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + E SP IK Sbjct: 61 DMELNGKSNQVLLRDVQMHPYKPLVLHIDFQRVDANTKLHMKVPLHYSGEENSPAIKDKS 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +N + E+ + C ++P+ I VDL+ L G S+H++DI LP+ ++++ Sbjct: 121 LVNHIVTELEISCLPKDLPEFIAVDLSKLTKGASLHLKDITLPKGVTAVTH 171 >gi|221199984|ref|ZP_03573027.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] gi|221206861|ref|ZP_03579873.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221211192|ref|ZP_03584171.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221168553|gb|EEE01021.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221173516|gb|EEE05951.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221180223|gb|EEE12627.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] Length = 205 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 5/194 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEN-HMKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP Sbjct: 60 HSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPA 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--- 176 +K ++ V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ + + Sbjct: 120 VKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDA 179 Query: 177 LNITIATIVAPISG 190 N IA+ P Sbjct: 180 ENPVIASATIPAGA 193 >gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] gi|68053083|sp|Q60A15|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] Length = 202 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R ++GKG++R LR G++PA++YG +P + L + K L ++ + + Sbjct: 4 SFVFEAELRHQLGKGASRRLRHAGKVPAVLYGGGGEPVSLLLDHHKVVKNLENEATYSHV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+ + I K Q P +++H DF +VS + VHVP+ FIN+ S G+K+G Sbjct: 64 LTIRFDGREENAILKAVQRHPAKPVVMHLDFQRVSAADKIRVHVPLHFINQESSVGVKKG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNI 179 G ++ +V + C ++P+ I VDL + IG IH+ D++LP + ++ Sbjct: 124 GVVSHGMVDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSDLKLPAGVEIHALAQGVGHDL 183 Query: 180 TIATIVAPIS 189 +A++ AP + Sbjct: 184 PVASVHAPRT 193 >gi|284159402|ref|YP_441031.3| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|83654462|gb|ABC38525.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia thailandensis E264] Length = 223 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 5/194 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 16 MEN-HMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAF 74 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP Sbjct: 75 HSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPA 134 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQ 176 +K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 135 VKLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDA 194 Query: 177 LNITIATIVAPISG 190 N +A+ P Sbjct: 195 ENPVVASATIPAGA 208 >gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25/general stress protein Ctc [Jannaschia sp. CCS1] gi|109893367|sp|Q28L99|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1] Length = 216 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P I+YG DP I + + KRL F Sbjct: 1 MAGEIPDLIAEARTGTGKGAARQARREGNVPGIVYGGGIDPLAINIPFNVLLKRLKDGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ + + + V VI ++ Q D V D+ H DF+++ S + + +PV I E + P Sbjct: 61 LSTLFNMKVEGQDDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPVEVIGEEECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IP+ IT+DL L+IGD++ + + LP + + Sbjct: 121 GLKKGGVLTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIANLTAPSG 190 >gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] Length = 232 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 1/178 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ A R+KVGKG+AR LR+N IPA+IYG+ DP PIAL K+ L++ FMT Sbjct: 2 HQTFEVKAEKREKVGKGAARALRRNAMIPAVIYGDNKDPLPIALPYKETFLALHAGGFMT 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + T+ +GKE + V+P+DYQLDPV D L H DFL+V E + VTV +PV F NE +SPG++ Sbjct: 62 NLATITVGKEKIKVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGLE 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +GG LNVV H V + C AN+IP+ T+DL +IGD++ I LP+ ++ + Sbjct: 122 RGGVLNVVRHAVEVECSANSIPEYFTIDLTGTEIGDTLASSSITLPDDVKFTITDRDF 179 >gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia baltica ATCC 49814] gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia baltica ATCC 49814] Length = 209 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 115/192 (59%), Gaps = 2/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+ +R++ GKG +R R+ ++PAI+YG P I+L +I K L + F Sbjct: 1 MAT-DILLNVELRERTGKGGSRQARRENRVPAILYGGKEAPVSISLDRIEILKALNTGKF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ ++ + VIP+D Q PV+++ +H D +V E V V VPV F E+ SPG Sbjct: 60 LSNLVEIEHKGKKQFVIPQDVQFHPVTEVALHVDLYRVKEDQLVKVEVPVHFTGEDVSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V H V L PA +IP+ +T D++ L IGD++ + +I LP+ + ++ + Sbjct: 120 IKRGGSLNIVRHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIELPKDATPTITDRDF 179 Query: 180 TIATIVAPISGS 191 TIATIV + + Sbjct: 180 TIATIVGRTASA 191 >gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|68053024|sp|Q5FFA2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053028|sp|Q5HC84|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 208 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 3 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + G+ Sbjct: 63 THLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGV 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNIT 180 K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP + + + + N T Sbjct: 123 KKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPT 182 Query: 181 IATIVAPIS 189 + TI S Sbjct: 183 LVTISGTSS 191 >gi|126454225|ref|YP_001064867.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1106a] gi|134279781|ref|ZP_01766493.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217420309|ref|ZP_03451815.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|226199547|ref|ZP_03795104.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242314590|ref|ZP_04813606.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|251767336|ref|ZP_02266847.2| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] gi|68053086|sp|Q63XL9|RL25_BURPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893348|sp|Q3JW87|RL25_BURP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52208574|emb|CAH34510.1| ribosomal L25p family protein [Burkholderia pseudomallei K96243] gi|126227867|gb|ABN91407.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a] gi|134248981|gb|EBA49063.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217397613|gb|EEC37629.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|225928428|gb|EEH24458.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242137829|gb|EES24231.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|243063117|gb|EES45303.1| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] Length = 208 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 121 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LN 178 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N Sbjct: 122 LSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAEN 181 Query: 179 ITIATIVAPISG 190 IA+ P Sbjct: 182 PVIASATIPAGA 193 >gi|206559196|ref|YP_002229956.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia J2315] gi|198035233|emb|CAR51107.1| ribosomal L25p family protein [Burkholderia cenocepacia J2315] Length = 205 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEN-HMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP Sbjct: 60 HSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPA 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--- 176 +K ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ + ++ Sbjct: 120 VKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLVAHVDA 179 Query: 177 LNITIATIVAPISG 190 N +A+ P Sbjct: 180 ENPVVASATVPAGA 193 >gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera sp. 301] gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera sp. 301] Length = 202 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 105/190 (55%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++AV RD G G++R LR+ G +P ++YG + + ++AK++ + F ++ Sbjct: 2 SIEINAVKRDVKGTGASRRLRRAGTVPGVVYGAGKEAVTLEINAKELFLEFRHEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L+L++ + +V+ +D+Q+ PV + + H DF +VS + V VP FIN + +PG+K Sbjct: 62 LSLNLDGKKENVLLRDFQMHPVRNTIQHIDFQRVSATEKIHVKVPFHFINADIAPGVKTG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNIT 180 GG + + E + C A ++P+ + VDL L++G SIH+ I+L + + + Sbjct: 122 GGIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQIKLAKGVEFVQLAHGNDAA 181 Query: 181 IATIVAPISG 190 +A I G Sbjct: 182 VAAIAKTRGG 191 >gi|257094305|ref|YP_003167946.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046829|gb|ACV36017.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 203 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R G G++R LR+ ++PAI+YG + P I L +I L + F ++ Sbjct: 2 TFELHARKRTLQGSGASRRLRREKRVPAIVYGGSAAPLLIDLDHNEILLNLRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 LTL++ V+ +D Q P +++H DF +V + VP+ F+N + +PG+K Sbjct: 62 LTLNVDGATQSVVLRDSQRHPWKPLVLHCDFQRVDTTHAIHQRVPLHFVNADIAPGVKIG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 GG + + +++ + C ++P I VDL +L+ G ++H+ ++ P ++ + + Sbjct: 122 GGNVAHILNDIEVTCLPQDLPAYIEVDLKNLESGHALHVSELVFPAGVKPVTHGDEDPVV 181 Query: 182 ATIVAPISGS 191 A+I A G+ Sbjct: 182 ASIPARKGGA 191 >gi|71279934|ref|YP_270232.1| 50S ribosomal protein L25/general stress protein Ctc [Colwellia psychrerythraea 34H] gi|109893355|sp|Q47Y88|RL25_COLP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71145674|gb|AAZ26147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Colwellia psychrerythraea 34H] Length = 211 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 7/190 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A +R +GKG++R LR ++PAI+YG +P + L K++ + + F + +L Sbjct: 5 LTLEAEVRTDLGKGASRRLRHANKVPAILYGENEEPISLTLEHKNVFRAQQEEAFYSQVL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL+I + V + KD Q P +++H DFL++ V + P+ F+NE+++ K G Sbjct: 65 TLNIAGKPVECLIKDMQRHPFKQVVMHLDFLRIDAKHAVHANAPIHFLNEDEAA--KTGA 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-----MSQLNIT 180 ++ +E+++ C ++P+ I++DL L++G +IH+ D+ P +S ++ Sbjct: 123 NISHHMNEIAITCLPKDLPEFISIDLAGLELGQTIHLSDVTFPAGVTSDELAKGEDHDLA 182 Query: 181 IATIVAPISG 190 + + AP + Sbjct: 183 VVSANAPKAA 192 >gi|213967230|ref|ZP_03395379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] gi|301381034|ref|ZP_07229452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato Max13] gi|302060384|ref|ZP_07251925.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato K40] gi|302134874|ref|ZP_07260864.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928072|gb|EEB61618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] Length = 203 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMPAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E I Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|161523692|ref|YP_001578704.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|189351544|ref|YP_001947172.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|226736290|sp|A9AEY7|RL25_BURM1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160341121|gb|ABX14207.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia multivorans ATCC 17616] gi|189335566|dbj|BAG44636.1| large subunit ribosomal protein L25 [Burkholderia multivorans ATCC 17616] Length = 201 Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ + + N I Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|323524671|ref|YP_004226824.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] gi|323381673|gb|ADX53764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] Length = 205 Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVEAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|257140316|ref|ZP_05588578.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|109893350|sp|Q2T1B8|RL25_BURTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 208 Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 5/194 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEN-HMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP Sbjct: 60 HSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPA 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQ 176 +K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 120 VKLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDA 179 Query: 177 LNITIATIVAPISG 190 N +A+ P Sbjct: 180 ENPVVASATIPAGA 193 >gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] Length = 215 Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R GKG+AR R++G +P ++YG DP I + + KRL + F Sbjct: 1 MAGKVPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPISINVPFNVLLKRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + + V VI ++ Q V D+ H DF+++ + + + + V FINE P Sbjct: 61 LSTLFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEEDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K+GG L V +EV L+ A +IP+ +TVDL L++GD+I + I+LP + + Sbjct: 121 ALKEGGVLIPVRNEVELIVTAGDIPEVLTVDLTGLELGDTITISSIKLPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP + Sbjct: 181 VIANLQAPAA 190 >gi|254262121|ref|ZP_04953175.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] gi|254220810|gb|EET10194.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] Length = 208 Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F + Sbjct: 2 EKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 62 SILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVK 121 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LN 178 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N Sbjct: 122 LSSAVVSHVVTEIEIECLPADLPEFLEVDLSXIEAGQSLHAKDIALPNGVALTAHVDAEN 181 Query: 179 ITIATIVAPISG 190 IA+ P Sbjct: 182 PVIASATIPAGA 193 >gi|190571325|ref|YP_001975683.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226694585|sp|B3CMB8|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 203 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD K + + LR+ G IPA+IYG D + LSAK+ +K+ S Sbjct: 1 MAQQEMVTINAELRDVKKKKAMQALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI + + + +D Q V D + H DF V +GS + + +P+ FINE+KSP Sbjct: 61 LSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINESKSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C IP I +DL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVAPIS 189 N TI TI A S Sbjct: 181 NFTIVTISAADS 192 >gi|68053213|sp|Q88PX7|RL25_PSEPK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 197 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + Sbjct: 1 MTEFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L++ +V+ K Q P ++HADF++V G +T VPV FINE +K Sbjct: 61 HVLELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 119 KGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|315127047|ref|YP_004069050.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] gi|315015561|gb|ADT68899.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] Length = 204 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 7/191 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F Sbjct: 1 MSNTTYTYDAELRVETGTGASRRLRREDKVPAILYGADKEAVSLTFAHKDMIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++G E V I KD Q P L H DF +V + VP+ FI E K Sbjct: 61 YTHILTLNVGGEKVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGEEKV-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 K G + EV + C ++P+ I VD++DL GDSIH+ D+ P+ S+ Sbjct: 119 TKLGATVVHQLTEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSVELGKGE 178 Query: 176 QLNITIATIVA 186 + +I TI A Sbjct: 179 GHDQSIVTIKA 189 >gi|163851898|ref|YP_001639941.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4] gi|226736336|sp|A9W5L4|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens DM4] Length = 228 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 2/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGFKTTVFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PGIK +GG Sbjct: 66 IDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LNV H +SL + IPD+I VDL +IGD IH D+RLP + + T+A ++ Sbjct: 126 TLNVALHTLSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAG-TYTGEPTDTVANLL 184 Query: 186 API 188 P Sbjct: 185 PPT 187 >gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax ferrireducens T118] gi|109893386|sp|Q21XW2|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118] Length = 223 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 100/184 (54%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG ++P+ I + + L + F +L Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGGAEPQQIEIDHNALWHALKKEAFHAAVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + + SP +K +G Sbjct: 61 DMELDGKDNKVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLHYSGDENSPAVKTEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 N V E+ +LC ++P+ I VDL+ LK G S+H+ D+ LP+ ++++ N + Sbjct: 121 CIANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVALPKGVTAVTRGNKNPVLV 180 Query: 183 TIVA 186 ++V Sbjct: 181 SVVV 184 >gi|167585421|ref|ZP_02377809.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ubonensis Bu] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGASQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + +DL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AIISHVATEIEVECLPADLPEFLEIDLSKIEAGQSLHAKDIVLPKGVALIAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASAALPAGA 189 >gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] Length = 211 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 4/195 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA++R GKG++R LR+ G +PAI+YG P+A+ D+ K +F Sbjct: 1 MSEYAYTLSAIVRQDSGKGASRRLRREGLVPAIVYGGEGAALPVAVKQDDLVKFGRFDSF 60 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+ L + + V VI +D Q + H DF +V G + V + F NE+ S Sbjct: 61 YSQIICLKVEGQGDVEVIVRDVQRHLYKPLYQHMDFQRVVRGQELQATVSLHFTNEDTSV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN- 178 G+K GG + + ++C N+P+ I VD+ ++ +GD IH+ D++LP+ + + Sbjct: 121 GVKAGGIVEHHLNSAEIVCLPRNLPEYIEVDMANVALGDVIHLRDLKLPQGVRLLHDDDR 180 Query: 179 --ITIATIVAPISGS 191 +A I P G+ Sbjct: 181 AEAVVAQITHPNRGA 195 >gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] Length = 221 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L+A +R GKG+AR R++G +P I+YG +DP+ I + + +L F Sbjct: 1 MAGKIPDLNAKVRAGTGKGAARQARRDGDVPGIVYGGGADPQSIIIPFNYLLTKLRKGGF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L I E V VI + Q D V D+ H D +++ S V + +PV F+N P Sbjct: 61 MSTLHNLKIEGEEDVRVICRGVQRDVVKDLPTHIDLMRLKRTSRVNIFIPVEFLNAETCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K+GG L VV +EV L A +IP+ I +DL +++IGD+I + D+ LPE + ++ + Sbjct: 121 GVKKGGVLTVVRNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDVTLPEGATPAITDRD 180 Query: 179 ITIATIVAPIS 189 IA + AP + Sbjct: 181 FVIANVQAPRA 191 >gi|330722355|gb|EGH00211.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047] Length = 225 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 11/198 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A RD +GKGS+R LR+ G IPAI+YG P+ I L+ KDI K ++ Sbjct: 1 MSN-EFSLNAQARDVLGKGSSRRLRRLEGNIPAIVYGGDKAPQNITLAHKDIIKAADNEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F I+ L+I VI KD Q P +++H DFL+V + + V VP+ FINE++ Sbjct: 60 FFAHIIDLNIDGNGESVIVKDMQRPPAKPVIMHVDFLRVRKDVAINVSVPLHFINEDECK 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 GIK QGG ++ EV + C ++P+SI VD+ ++++ +H+ D+ LP+ + Sbjct: 120 GIKLQGGVVSHNLTEVEISCLPGDLPESIDVDMANVEVDQIVHLSDLALPKGVTLAAFSH 179 Query: 175 ----SQLNITIATIVAPI 188 + ++ +A I AP Sbjct: 180 GGDEHEHDLPVAAIHAPK 197 >gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium chloromethanicum CM4] gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] gi|254801054|sp|B7KNU8|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium chloromethanicum CM4] gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] Length = 228 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 87/183 (47%), Positives = 117/183 (63%), Gaps = 2/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGFKTTVFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 +D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PGIK +GG Sbjct: 66 IDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LNV H VSL + IPD+I VDL +IGD IH D+RLP + + T+A ++ Sbjct: 126 TLNVALHTVSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAG-TYTGEPTDTVANLL 184 Query: 186 API 188 P Sbjct: 185 PPT 187 >gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] Length = 210 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 1/183 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R++ G G AR R+NG +P ++YG P IAL ++ K + S F+ Sbjct: 1 MSDIVLSVEVRERTGTGGARETRRNGFVPGVLYGGDKGPVSIALKNNEVIKAINSGKFLA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++T+D E V+ +D Q PV D +H DF +V E + +TV V V F N+ KSPG+K Sbjct: 61 QMITIDHKGEKQSVLTRDVQFHPVRDEPVHIDFQRVDESTIITVEVTVHFHNDEKSPGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 +GG LNVV H V + PA +IPD I VDL+ IGDSIH+ + LPE + ++ + TI Sbjct: 121 RGGVLNVVRHAVEVNVPAGSIPDQIDVDLSGYDIGDSIHISAVTLPEGVTPAITDRDFTI 180 Query: 182 ATI 184 ATI Sbjct: 181 ATI 183 >gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 210 Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 +N V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S++ SQ N + Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSAVVRGSQQNPVL 180 Query: 182 ATIVAPIS 189 ++V P++ Sbjct: 181 VSVVTPVA 188 >gi|332532472|ref|ZP_08408350.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] gi|332038115|gb|EGI74562.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] Length = 203 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 7/191 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F Sbjct: 1 MSNKTYTYNAELRVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P L H DF +V VP+ FI E Sbjct: 61 YTHILTLNVDGEAVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEEIV-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 K G + EV + C +P+ I VD++ +GDS+H+ D+ P+ SS+ Sbjct: 119 TKAGATVVHQLTEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSVDLAKGE 178 Query: 176 QLNITIATIVA 186 + +I TI A Sbjct: 179 GHDQSILTIKA 189 >gi|312958844|ref|ZP_07773363.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] gi|311286614|gb|EFQ65176.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] Length = 199 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 109/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNNFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G + +VI K Q P ++HADF++V G +T VPV F+ E + Sbjct: 61 SHVIELNVGGKKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V +E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|66044196|ref|YP_234037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae B728a] gi|75503328|sp|Q4ZXX3|RL25_PSEU2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|63254903|gb|AAY35999.1| Ribosomal protein L25 [Pseudomonas syringae pv. syringae B728a] Length = 204 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGSLEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|171320165|ref|ZP_02909227.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] gi|171094579|gb|EDT39631.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] Length = 202 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AIVSHVATEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] Length = 215 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI L + +L + F Sbjct: 1 MAGEIPDLEAFERTGTGKGAARQARRDGMVPGIVFGGDLDPLPINLDFNKLLTKLRAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + E V VI +D Q V D+ H D +++ + + + + V E SP Sbjct: 61 KATLFNLKVEGQEDVRVICRDVQRHVVKDLPTHVDLMRLKRTTKINLFIQVEVEGEEVSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L+ A +IPD IT+D+++L+IGDS+ + ++LP T + + Sbjct: 121 GLKKGGVLTLVRPEVELVVTAGDIPDHITIDVSELEIGDSLTISSVKLPNGTKPVIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIAQISAPSG 190 >gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens SBW25] gi|259646693|sp|C3KCS0|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens SBW25] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR IPA++YG + + + +K+I+K ++ + Sbjct: 1 MNDFTLNAQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILSKEIAKLFENEAAYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +VI K Q P ++HADF++V G +T VPV F+ E+ +K Sbjct: 61 HVIELNVDGTKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVGEDAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG ++ E+ + C ++P+ I VDL+ +IG IH+ D++ P+ + + Sbjct: 119 KGGVVSHTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPKGVEFVALAHNDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium populi BJ001] gi|226736337|sp|B1Z970|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium populi BJ001] Length = 228 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 87/183 (47%), Positives = 116/183 (63%), Gaps = 2/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPEAIAVDLIRTRTLIYAGGFKTTLFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGG 125 + +G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+N+ K+PGIK +GG Sbjct: 66 ITVGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNDEKAPGIKQKGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LNV H VSL + IPD+I VDL +IGD IH D+RLP + + T+A I+ Sbjct: 126 TLNVALHTVSLDVAPDQIPDAIEVDLTGREIGDVIHASDLRLPAG-TYTGEPTDTVANIL 184 Query: 186 API 188 P Sbjct: 185 PPT 187 >gi|330961721|gb|EGH61981.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. maculicola str. ES4326] Length = 203 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFVNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ ++ + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|53724085|ref|YP_104605.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei ATCC 23344] gi|121600473|ref|YP_991440.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei SAVP1] gi|126449568|ref|YP_001082450.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10247] gi|161723210|ref|YP_107146.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei K96243] gi|162210089|ref|YP_332166.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1710b] gi|167718014|ref|ZP_02401250.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei DM98] gi|167737031|ref|ZP_02409805.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 14] gi|167814140|ref|ZP_02445820.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 91] gi|167822665|ref|ZP_02454136.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 9] gi|167844236|ref|ZP_02469744.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei B7210] gi|167892746|ref|ZP_02480148.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 7894] gi|167901242|ref|ZP_02488447.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei NCTC 13177] gi|167909460|ref|ZP_02496551.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 112] gi|167917488|ref|ZP_02504579.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei BCC215] gi|237810771|ref|YP_002895222.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] gi|254181866|ref|ZP_04888463.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|254187800|ref|ZP_04894312.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|254201692|ref|ZP_04908056.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|254207026|ref|ZP_04913377.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|254296082|ref|ZP_04963539.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|68053085|sp|Q62FC2|RL25_BURMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223666|sp|A3MQB4|RL25_BURM7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223667|sp|A1UZN7|RL25_BURMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52427508|gb|AAU48101.1| ribosomal protein L25 [Burkholderia mallei ATCC 23344] gi|121229283|gb|ABM51801.1| 50S ribosomal protein L25 [Burkholderia mallei SAVP1] gi|126242438|gb|ABO05531.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247] gi|147747586|gb|EDK54662.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|147752568|gb|EDK59634.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|157805601|gb|EDO82771.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|157935480|gb|EDO91150.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|184212404|gb|EDU09447.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|237505924|gb|ACQ98242.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] Length = 204 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N I Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|77359996|ref|YP_339571.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] gi|109893380|sp|Q3IK85|RL25_PSEHT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76874907|emb|CAI86128.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] Length = 204 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 2/175 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R++ G G++R LR+ ++PAI+YG + I L KD+ K S+ F Sbjct: 1 MSNKTYVYNAELREQTGTGASRRLRREDKVPAIVYGANKEATSITLDHKDVIKAQESEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL+IG E V I KD Q P + H DF ++ + VP+ F+ E+ Sbjct: 61 YTQILTLNIGGESVETILKDIQRHPFKPKVTHLDFQRIDANQKLHTIVPIHFVGEDVVE- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 K G + E+ + C IPD +TVD++ L GDS+H+ D+ LP SS+ Sbjct: 120 -KLGTTVVRQLTEIEISCFPKAIPDFVTVDVSKLVAGDSLHISDVALPAGVSSID 173 >gi|115352914|ref|YP_774753.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria AMMD] gi|170701088|ref|ZP_02892064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|172061762|ref|YP_001809414.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria MC40-6] gi|122322183|sp|Q0BBQ4|RL25_BURCM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736288|sp|B1YN53|RL25_BURA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115282902|gb|ABI88419.1| LSU ribosomal protein L25P [Burkholderia ambifaria AMMD] gi|170133989|gb|EDT02341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|171994279|gb|ACB65198.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MC40-6] Length = 202 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|254247176|ref|ZP_04940497.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] gi|124871952|gb|EAY63668.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] Length = 205 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEN-HMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL L++ + V+ +D Q P +++H DF +V + P+ F+N SP Sbjct: 60 HSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPA 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--- 176 +K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ Sbjct: 120 VKLSSAIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDA 179 Query: 177 LNITIATIVAPISG 190 N IA+ P Sbjct: 180 ENPVIASATVPAGA 193 >gi|289678416|ref|ZP_06499306.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae FF5] gi|302186450|ref|ZP_07263123.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae 642] gi|330899761|gb|EGH31180.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941708|gb|EGH44465.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. pisi str. 1704B] gi|330972808|gb|EGH72874.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aceris str. M302273PT] Length = 204 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] Length = 211 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 114/198 (57%), Gaps = 9/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +L+A +R+ G G++R LR+ G+ PAI+YG +P+ + L K++ K + Sbjct: 1 MAN--YELNAEVREVKGTGASRRLRREEGKTPAIVYGGDKEPQQVTLQLKELKKAFEDET 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+ L++G VI KD Q P ++++H DFL+VS+ + + H+P+ F+NE+ Sbjct: 59 FFSHIIKLNVGGTAETVIVKDVQRHPYQNLVMHVDFLRVSKSTVIKQHIPLHFLNEDTCK 118 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K QGGK+ ++ ++C A +P+ I VDL D+++G +H+ D++LP ++ Sbjct: 119 GVKLQGGKITHNMTDIEVICEAGKLPEFIEVDLADVEVGTVLHLSDLKLPAGVEALELTH 178 Query: 175 -SQLNITIATIVAPISGS 191 + + + T+ P + Sbjct: 179 GADHDAAVLTVDVPKGSA 196 >gi|330873313|gb|EGH07462.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967422|gb|EGH67682.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. actinidiae str. M302091] Length = 203 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E + Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|330951110|gb|EGH51370.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae Cit 7] Length = 204 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGTLEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|237799721|ref|ZP_04588182.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022576|gb|EGI02633.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] Length = 204 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVLHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] Length = 220 Score = 215 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR +R+ +P I++G DP PI + + K+L F Sbjct: 5 MAGEIPDLHAQERTGTGKGAARAVRRAHMVPGIVFGGDVDPLPIQIPYNVLIKKLKEGRF 64 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ + + + +PV F E+ +P Sbjct: 65 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPVTFTGEDVAP 124 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV +E+ L+ A +IP+ +TVDL+ + IGD++ + + LPE + + Sbjct: 125 GLKKGGVLTVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQVTLPEGAQTTIDRDF 184 Query: 180 TIATIVAPIS 189 I I AP + Sbjct: 185 VICNISAPSA 194 >gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] Length = 229 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A RD G G++R LR+NG++P I+YGN D I L +K + ++ + + F +IL Sbjct: 3 ITVTAEKRDVKGTGASRRLRRNGKVPGILYGNHKDAVSIVLDSKTLHQQFHKEAFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L V+ +DYQL+PV ++H DF +V++ + V+VP FINE+ + G+K +G Sbjct: 63 ELSTDGTKESVLLRDYQLEPVKGTILHVDFQRVNQNEKIHVNVPFHFINEDIAKGVKLEG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ + EV + C ++P I VDL DL +G+S+H+ ++ LPE + + + I Sbjct: 123 GVISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVHLSELNLPEGVELTALTEENDPAI 182 Query: 182 ATIVAPI 188 +IV P Sbjct: 183 TSIVKPK 189 >gi|186475083|ref|YP_001856553.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phymatum STM815] gi|226736291|sp|B2JCN8|RL25_BURP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|184191542|gb|ACC69507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phymatum STM815] Length = 203 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 5/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R+ G G++R LR +G+ P I+YG +P+ I L + L + F ++IL Sbjct: 1 MKVVAFERNLQGTGASRRLRNSGKAPGIVYGAG-EPQLIELDHNALWHALKKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K GG Sbjct: 60 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLGG 119 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C +P+ I VDL ++ G S+H DI LP + ++ N I Sbjct: 120 AIISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDIALPAGVALVAHLVAENPVI 179 Query: 182 ATIVAPISG 190 + P Sbjct: 180 VSAPIPAGA 188 >gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus denitrificans PD1222] gi|166223701|sp|A1B9E9|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222] Length = 208 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G++P I+YG+ +P+PI + + +L + F Sbjct: 1 MAKEIPDLVAEARAGTGKGAARQARREGKVPGIVYGDGKEPQPIQIEFNSLLTKLRAGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + + V V+ + Q D V D+ H DF+++ + V + + V F N++++P Sbjct: 61 MSTLWNLKVEGQDDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHVNFENQDEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A++IP+ ITVDL +IGD+IH+ D+ LP+ N Sbjct: 121 GLKRGGTLVVVRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDVVLPKGVKPTIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIAAPSG 190 >gi|71734821|ref|YP_273262.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482001|ref|ZP_05636042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627924|ref|ZP_06460878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647281|ref|ZP_06478624.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 2250] gi|298485675|ref|ZP_07003754.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|109893378|sp|Q48MW0|RL25_PSE14 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71555374|gb|AAZ34585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159701|gb|EFI00743.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320327397|gb|EFW83411.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330868892|gb|EGH03601.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881888|gb|EGH16037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330988611|gb|EGH86714.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008861|gb|EGH88917.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 203 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 226 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 84/183 (45%), Positives = 117/183 (63%), Gaps = 2/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQPPQSIAIDLIRTRTLIYAGGFKTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQGG 125 + +G + IP+D+QLDPVS + +H DFL+V G TVTV VPV F+NE+++PGI K+GG Sbjct: 66 ITVGGKKTRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNEDQAPGIKKKGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LNV H +SL + IPD++ +DL +IGD IH D+RLP S + T+A I+ Sbjct: 126 TLNVALHTLSLEVAPDQIPDAVEIDLAGREIGDVIHASDLRLPAG-SYTGEPTDTVANIL 184 Query: 186 API 188 P Sbjct: 185 PPT 187 >gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] Length = 218 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R GKG+AR R++G +P I++G ++P PI + + RL F Sbjct: 1 MAGEIPDLEAQVRTGTGKGAARQARRDGMVPGIVFGGDNEPLPINIPFNKLLTRLRQGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + + V VI +D Q V D+ H D +++ + + + + V E + P Sbjct: 61 KATLFNLKVEGHDDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKINLFINVEVKGEEECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L+ A +IP+ +TVD+ L+IGDS + + LPE + Sbjct: 121 GLKKGGVLTLVRPEVELVVTAADIPEFVTVDVTGLEIGDSATISRVDLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IAT+ AP Sbjct: 181 VIATVSAPAG 190 >gi|307544466|ref|YP_003896945.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] gi|307216490|emb|CBV41760.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] Length = 217 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 113/194 (58%), Gaps = 7/194 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R+ +GKG++R LR+ Q+PAIIYG P+ IA+ K + + F Sbjct: 1 MSDYILTASVRNDLGKGASRRLRRANEQVPAIIYGGDKAPEAIAVDKTHFYKSIEEEAFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++++T+++ + V+ +D Q P ++ HADF+++ +T+ VP+ +NE GI Sbjct: 61 SSVITIEVEGKPQQVVVRDLQRHPYKPLVTHADFMRIDATHEITMRVPLHVVNEESCKGI 120 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 K +GG+L+V+ +EV + C ++PD + +D+ ++ +G ++H+ D++LP + ++ Sbjct: 121 KDEGGELHVLSNEVEVSCLPKDLPDYLEIDIAEVTLGTTLHLSDLKLPAGVTLVALTHGE 180 Query: 176 QLNITIATIVAPIS 189 + + ++ P + Sbjct: 181 DHDNAVLSVTQPKT 194 >gi|209519642|ref|ZP_03268432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] gi|209499928|gb|EDZ99993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFMNQESNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVLNEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|28868318|ref|NP_790937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|71153160|sp|Q888C7|RL25_PSESM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28851555|gb|AAO54632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|331018128|gb|EGH98184.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 203 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E I Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ ++ + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|78067602|ref|YP_370371.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. 383] gi|109893349|sp|Q39CT9|RL25_BURS3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77968347|gb|ABB09727.1| LSU ribosomal protein L25P [Burkholderia sp. 383] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEISPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ ++ N + Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDITLPKGVVLVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|107023736|ref|YP_622063.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia AU 1054] gi|116690823|ref|YP_836446.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia HI2424] gi|170734148|ref|YP_001766095.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia MC0-3] gi|123244641|sp|Q1BTG5|RL25_BURCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223665|sp|A0KAM6|RL25_BURCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736289|sp|B1JYQ0|RL25_BURCC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|105893925|gb|ABF77090.1| LSU ribosomal protein L25P [Burkholderia cenocepacia AU 1054] gi|116648912|gb|ABK09553.1| LSU ribosomal protein L25P [Burkholderia cenocepacia HI2424] gi|169817390|gb|ACA91973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia cenocepacia MC0-3] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ N I Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2] Length = 226 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A R GKG++R LR GQ+PAI+YG +DP I L + S+ F Sbjct: 1 MSEHKITATSRKDEGKGASRRLRHAGQVPAIVYGGHADPVSIQLEHERTWLVSQSEWFYA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L+I + V+ +D Q P ++H DF +VS + V VP+ F+N +KSP K Sbjct: 61 SILDLEIDGKSEKVLLRDMQRHPYKQRIMHMDFQRVSANEAIRVSVPLHFLNVDKSPAGK 120 Query: 123 QGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLN 178 G + ++ + C ++P+ I +DL++L+ GD++H+ ++LP+ + Sbjct: 121 TAGVVVMHELTQIEVSCLPGDLPEFIDIDLSNLQAGDTMHLSQVQLPKGVEVPELRLGAD 180 Query: 179 ITIATIVA 186 +A +VA Sbjct: 181 HDVAVVVA 188 >gi|239817313|ref|YP_002946223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] gi|259646698|sp|C5CYZ6|RL25_VARPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239803890|gb|ACS20957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] Length = 224 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR +G+ P I+YG P+ I L + L + F ++IL Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++G V+ +D Q P ++ H DF +V + + + VP+ + E +S +K Sbjct: 61 EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH 120 Query: 126 KL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 L V E+ + C ++P+ I VDL+ LK ++H+ DI+LP+ +S LN I Sbjct: 121 NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVIV 180 Query: 183 TIVAPI 188 + V P+ Sbjct: 181 SAVPPL 186 >gi|90408736|ref|ZP_01216883.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] gi|90310153|gb|EAS38291.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] Length = 205 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL A R +GKG++R LR +P I+YG DP + K++ K + F ++I Sbjct: 2 SIKLVAQTRTDLGKGASRRLRHAELVPGIVYGIGKDPISLTFEQKELRKIESVEAFYSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+I + V+ K Q + + H D L+V + +P+ FIN + + +K G Sbjct: 62 LDLEIDGTVEKVVLKALQRHAFKEQIQHLDLLRVDASHKLQTTIPLHFINADTNEALKAG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNI 179 G L + +EVS+ C ++P IT DL +L++G S+H+ D+ LP+ S+ ++ + Sbjct: 122 GVLTQIMNEVSISCLPTDLPAFITADLANLEMGTSLHISDLVLPKGVESVELIKGTEYDR 181 Query: 180 TIATIVA 186 +IA+I A Sbjct: 182 SIASISA 188 >gi|126439855|ref|YP_001057621.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 668] gi|166223668|sp|A3N5K0|RL25_BURP6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|126219348|gb|ABN82854.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668] Length = 204 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEVAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N I Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella petrii DSM 12804] gi|226736285|sp|A9I6W5|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii] Length = 207 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 + + + V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 61 QMQLDGKEEAVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFINGENSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 ++ V E+ + C +P I VDL +L G S+H+ D++LP+ + + S N + Sbjct: 121 AIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSDVKLPKGVTYVAHGSDANPVL 180 Query: 182 AT 183 A+ Sbjct: 181 AS 182 >gi|295675403|ref|YP_003603927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] gi|295435246|gb|ADG14416.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] Length = 205 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFLNQETNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVINEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|170750343|ref|YP_001756603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] gi|226736338|sp|B1LZ78|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] Length = 227 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 84/183 (45%), Positives = 117/183 (63%), Gaps = 2/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGGQPPQSIAVDLIRTRTLIYAGGFKTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 ++ G + V IP+D+QLDPV+ + +H DFL+V G TVTV VPV F+NE+ +PGIK+ GG Sbjct: 66 INAGGKKVRAIPRDFQLDPVTGVPLHVDFLRVVSGQTVTVEVPVHFVNEDAAPGIKKLGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LN+V H +SL + IPD+I VDL IGD IH+ DI++P + + +A IV Sbjct: 126 TLNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDVIHVSDIKIPAG-TYTGEATDPVANIV 184 Query: 186 API 188 P Sbjct: 185 PPT 187 >gi|319945392|ref|ZP_08019653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] gi|319741385|gb|EFV93811.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] Length = 215 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R VG ++R LR+ Q+P I+YG + P +AL + L + F ++IL Sbjct: 1 MQISAQERKDVGTSASRRLRRANQVPGIVYGGEAAPIQVALDHNTLYHALRVEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 +DI + V+ ++ Q P ++H DF +V+ +TV VP+ FIN SP +KQ Sbjct: 61 DMDIDGKKQRVLLRNVQWHPYKQQVLHVDFQRVAANQKITVKVPLHFINGENSPAVKQTK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIA 182 +N V E+ + ++P+ I VDL +L + SIH+ I+LP+ +++ + +A Sbjct: 121 AVVNHVMTEIEVQVLPKDLPEFIEVDLAELAMEHSIHLSSIKLPKGVTAVVAPGTDPVLA 180 Query: 183 T 183 + Sbjct: 181 S 181 >gi|134296999|ref|YP_001120734.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia vietnamiensis G4] gi|166223669|sp|A4JHZ6|RL25_BURVG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134140156|gb|ABO55899.1| LSU ribosomal protein L25P [Burkholderia vietnamiensis G4] Length = 201 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F +IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEIAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP + ++ N + Sbjct: 121 AIVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNGVALVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|116052816|ref|YP_793133.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa UCBPP-PA14] gi|296391492|ref|ZP_06880967.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAb1] gi|313107333|ref|ZP_07793528.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] gi|122257173|sp|Q02G03|RL25_PSEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115588037|gb|ABJ14052.1| putative ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14] gi|310880030|gb|EFQ38624.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] Length = 204 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQSGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + ++ +A Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVA 185 Query: 183 TIVA 186 I A Sbjct: 186 NIHA 189 >gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] Length = 215 Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R GKG+AR R++G +P ++YG DP I + + KRL + F Sbjct: 1 MAGKIPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPIAINVPFNVLLKRLQAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + + V VI ++ Q V D+ H DF+++ + + + + V FINE++ P Sbjct: 61 LSTLFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEDECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K+GG L V +EV L+ A +IP+ +TVDL L++G++I + I+LP + + Sbjct: 121 ALKEGGVLIPVRNEVELIVTAGDIPEILTVDLTGLELGETITISSIKLPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP + Sbjct: 181 VIANLQAPAA 190 >gi|330975570|gb|EGH75636.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 204 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAS 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|126665169|ref|ZP_01736152.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] gi|126630539|gb|EBA01154.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] Length = 211 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 8/196 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q + + A RD G+G++R LR+ +IPAIIYG D PI++ ++ K L ++ Sbjct: 1 MSQ-DFVIEAFPRDDQGRGASRRLRRQERKIPAIIYGGHKDATPISIWHNELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LT+++ E VI KD Q P +L HADF ++++ + VHVP+ +NE +P Sbjct: 60 FYSRVLTIELNGEKESVILKDLQRHPYKPLLSHADFQRINKDEEIFVHVPLHLVNEETAP 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 IK GG + +V + C N+P+ I +DL D+++ +HM D++LPE Sbjct: 120 AIKTFGGVAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSDLKLPEGVRIPALQH 179 Query: 175 -SQLNITIATIVAPIS 189 ++ + I TI P Sbjct: 180 GAEHDQAIVTINKPKG 195 >gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas ingrahamii 37] gi|226736354|sp|A1STD7|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37] Length = 203 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL+A R +GKG++R LR +PAI+YG + + + KDI K + F +++ Sbjct: 2 SIKLTATTRTDLGKGASRRLRHADLVPAIVYGADKEAVSLTFTHKDIIKAEGIEAFYSSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+I V+ KD Q + H D L+V + VP+ FINE S IK G Sbjct: 62 LDLEIDGVSEQVVLKDLQRHAFKARIQHLDLLRVDAKHKLHTTVPLHFINEGLSEAIKNG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNI 179 G + +EV +LC ++P I VD++ ++IGD++H+ +I LP S+ + ++ Sbjct: 122 GIVYRTINEVEVLCLPKDLPSFIEVDISTMEIGDTLHLSNITLPAGVESVELNKGEEHDL 181 Query: 180 TIATIV 185 + +I Sbjct: 182 PMVSIA 187 >gi|49089156|gb|AAT51649.1| PA4671 [synthetic construct] Length = 205 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + ++ +A Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVA 185 Query: 183 TIVA 186 I A Sbjct: 186 NIHA 189 >gi|15599866|ref|NP_253360.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAO1] gi|107099662|ref|ZP_01363580.1| hypothetical protein PaerPA_01000680 [Pseudomonas aeruginosa PACS2] gi|218893768|ref|YP_002442637.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa LESB58] gi|254238589|ref|ZP_04931912.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|254244437|ref|ZP_04937759.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|71153159|sp|Q9HVC4|RL25_PSEAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736352|sp|B7V0L7|RL25_PSEA8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9950927|gb|AAG08058.1|AE004881_1 probable ribosomal protein L25 [Pseudomonas aeruginosa PAO1] gi|126170520|gb|EAZ56031.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|126197815|gb|EAZ61878.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|218773996|emb|CAW29811.1| probable ribosomal protein L25 [Pseudomonas aeruginosa LESB58] Length = 204 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + ++ +A Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVA 185 Query: 183 TIVA 186 I A Sbjct: 186 NIHA 189 >gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] Length = 205 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A RD+VGKG++R LR+ G++PA+IYG I L K + K L + +F T++ Sbjct: 4 TLTLAAETRDQVGKGASRSLRREGRVPAVIYGQNKAAASIHLEEKALVKALMTGHFFTSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +D + KD PV+D +H DFL++ E TVTV VPV F +E++S GIKQG Sbjct: 64 IMVDG----QRTLAKDVAFHPVTDRPLHVDFLRIGEHETVTVAVPVVFTDEDESRGIKQG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LNV HE+ ++ A +IP IT+ L L++GDSIH+ D++LP+ + + + IAT Sbjct: 120 GVLNVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISDVKLPKGATPAIDDRDFAIAT 179 Query: 184 IVAPI 188 IV P Sbjct: 180 IVPPT 184 >gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] Length = 206 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G ++P I + + +L + F Sbjct: 1 MAGEIPDLVALERSGTGKGAARQARRDGMVPGILFGGDAEPLAIQMPFNKMLHQLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + + V VI +D Q D V D+ H D +++ + + + + V FINE K+P Sbjct: 61 KQTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLFIHVDFINEEKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IPD ITVDL +IGD IH+ D+ LPE + Sbjct: 121 GLKRGGVLTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDVTLPEGVKPTVDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPRG 190 >gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby] gi|296108297|ref|YP_003619998.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] gi|166223693|sp|A5IAS4|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding protein [Legionella pneumophila str. Corby] gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] Length = 219 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ Sbjct: 1 MSTIQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGI Sbjct: 61 SSVFDITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG + +V + C A ++P+ I VD++ + + D +H+ D++LP+ Sbjct: 121 KAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVTDGS 180 Query: 177 LNITIATIVA 186 + + +I A Sbjct: 181 HDAPVVSIHA 190 >gi|152980425|ref|YP_001354819.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] gi|166223690|sp|A6T2S2|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] Length = 214 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 1 MKVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ F+N SP +K G Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ V E+ + C +++P+ + VDL +L +G SIH+ DI+LP+ +++ + N TI Sbjct: 121 GIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTI 180 Query: 182 ATIVAPIS 189 AT P Sbjct: 181 ATASVPAG 188 >gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Lens] gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Paris] gi|68053068|sp|Q5WTE8|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053069|sp|Q5X1N8|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053082|sp|Q5ZS67|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris] gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens] gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b] Length = 219 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ Sbjct: 1 MSTIQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGI Sbjct: 61 SSVFDITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG + +V + C A ++P+ I VD++ + + D +H+ D++LP+ Sbjct: 121 KAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVADGS 180 Query: 177 LNITIATIVA 186 + + +I A Sbjct: 181 HDAPVVSIHA 190 >gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont of Drosophila melanogaster] gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] gi|71153674|sp|Q73II9|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801068|sp|C0R595|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] Length = 203 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVAPIS 189 N TI TI A S Sbjct: 181 NFTIVTISAADS 192 >gi|320325684|gb|EFW81745.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. B076] Length = 203 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I V+L L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVNLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|323388152|gb|ADX60348.1| 50S ribosomal protein L25 noteral stress protein Ctc [Pseudomonas fluorescens] Length = 199 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+I+K L + Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEIAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV F+ E + Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEVSHVIAEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|190572919|ref|YP_001970764.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia K279a] gi|190010841|emb|CAQ44450.1| putative 50S ribosomal protein L25 [Stenotrophomonas maltophilia K279a] Length = 205 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ F+NE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPA 119 Query: 121 IKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 K + EV++ C ++P+SI VDL +LK GD +++ DI+LP+ + Sbjct: 120 GKAADVVVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSDIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|260219880|emb|CBA26854.1| 50S ribosomal protein L25 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 227 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K A R K G G++R LR G+ P I+YG +P I L + L + F +TI Sbjct: 20 DMKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPLLIELDHNALWHALKKEAFHSTI 79 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++ + V+ +D Q+ P +++H DF +V + +++ VP+ F + SP +K Sbjct: 80 LDMEFNGKESKVLLRDVQMHPYKQLVLHIDFQRVEANTKLSMRVPLHFSGQENSPAVKTD 139 Query: 125 GKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 L N V E+ + C ++P+ I VDL+ L+ G S+H+ D+ LP+ T +++ Sbjct: 140 ACLINHVITELEVACLPADLPEFIAVDLSGLEKGKSLHVNDLALPKGTVAVTH 192 >gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter sp. K31] gi|189042349|sp|B0T899|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter sp. K31] Length = 199 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 101/182 (55%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD+ G G +R R+ G++P ++YG P IA+ + K L++ + + Sbjct: 3 EIILNVEIRDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI K Q PV+D +H D +V E + + +PV F N + S G+K+G Sbjct: 63 VTLQHGDEKQSVIAKAVQFHPVTDEPLHFDLYRVDEHQLIKIEIPVHFKNHDISVGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++ H V L CPA+ IP+ + +DL IGD+I + +I+LPE + + IA + Sbjct: 123 GTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIKLPEGVRPAMERDFVIANL 182 Query: 185 VA 186 A Sbjct: 183 KA 184 >gi|126727672|ref|ZP_01743504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] gi|126703088|gb|EBA02189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] Length = 217 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 106/193 (54%), Gaps = 2/193 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L+ +R GKG+AR R++G +P +YG DP I + + KRL + F Sbjct: 1 MAGKIPDLNVSVRTGTGKGAARQSRRDGNVPGTVYGGGQDPIAIEIPFNALFKRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I E V V+ +D Q D V D+ IH D +++ S V + + V FIN +SP Sbjct: 61 LATLFNLKIEGQEDVRVVCRDVQRDKVKDLPIHLDLMRLRRDSRVAMSITVEFINHEESP 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ QGG LN V EV L A++IPD ITVDL L +G +I + DI LP+ + + Sbjct: 121 GLANQGGSLNTVRPEVELSVIASDIPDHITVDLAGLNVGATISISDIDLPKGAEPTIERD 180 Query: 179 ITIATIVAPISGS 191 IATI AP S Sbjct: 181 FIIATIAAPGGAS 193 >gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 203 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +R+ + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRNVTKTKAVHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVAPIS 189 N TI TI A S Sbjct: 181 NFTIVTISAADS 192 >gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] Length = 220 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 110/198 (55%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +K + A +R +GKG++R LR++ IPAIIYG +P P+ + KD+ K L ++ Sbjct: 1 MSEK-LAIEATVRSDLGKGASRRLRRSVDHIPAIIYGAGKEPTPLTIIRKDLEKSLENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ +++ ++ I KD Q P + ++HADFL+V + V VP+ FINE K Sbjct: 60 FFSQVIDVNVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVSVPLHFINEEKCH 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 G+K +GG + + E+ +LC IP+ I VD+ ++ D +H+ D++LPE Sbjct: 120 GVKIEGGIIEHMLTELEVLCLPGLIPEYIEVDMENVTTADILHISDLKLPEGVVSTALEL 179 Query: 174 MSQLNITIATIVAPISGS 191 ++ + T+ A G Sbjct: 180 GEDHDMAVTTVSAKRGGG 197 >gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria pomeroyi DSS-3] gi|68053037|sp|Q5LV90|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3] Length = 207 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G ++P PI + + K L + F Sbjct: 1 MAGEIPDLVALERTGTGKGAARQARRDGMVPGIVFGGDNEPLPIQIPFNRLLKMLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H D +++ S + + + V F+N +P Sbjct: 61 KSTLFNLKVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVDFVNHAAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IP+SITVDL L IGD + + + LP + + Sbjct: 121 GLKKGGVLTVVRPEVELEVTAGDIPESITVDLTGLNIGDVVTISSVTLPAGAKPTVERDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] gi|171769611|sp|A7HVD8|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] Length = 216 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 79/180 (43%), Positives = 118/180 (65%), Gaps = 2/180 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + L A R+K KG+ R LR+ G++PA+IYG+ P+ IA+S KD+S + F Sbjct: 1 MAETQ-TLKAEAREKGSKGAVRSLRRAGRVPAVIYGDKQSPELIAVSYKDVSALYQTGTF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 M+ +L ++IG + VIP+D Q +PV D +IH DFL++ + +TVTV VPV F N SPG Sbjct: 60 MSHVLDVEIGGKTERVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHEASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK GG LN+V HEV L+CPA+ IP+ + +DL ++G SIH+ ++LP K S ++ + Sbjct: 120 IKAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHISAVKLPAKVSPTITDRDF 179 >gi|77164043|ref|YP_342568.1| ribosomal protein L25 [Nitrosococcus oceani ATCC 19707] gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] gi|109893372|sp|Q3JDQ8|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707] gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] Length = 214 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 108/193 (55%), Gaps = 7/193 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R + GKG++R LR+ G++PA++YG +P + + + L F + IL Sbjct: 5 FELHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHIL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 T+ + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG+KQ Sbjct: 65 TIHANGKAERVVLKALQRDPVNPNKVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPGVKQE 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG + + +++ + C A ++P+ I VDL DL +G+++H+ D++LP + + Sbjct: 125 GGTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEIPALKLGEDYD 184 Query: 179 ITIATIVAPISGS 191 + TI P + + Sbjct: 185 QPVVTIHKPRAAA 197 >gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] Length = 237 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 6/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 +L+A R G G++R LR+ ++PAI+YG P PI+L + + L ++ F + Sbjct: 7 SFELTAQTRKMFGSGASRRLRRLENRVPAILYGASEPPLPISLEHNQVLRALENEAFYSH 66 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 ILT++I + KD Q ++H D +VS +T+ VP+ F E ++PG+K Sbjct: 67 ILTINIEGTEQKAVLKDLQRHAYKPYILHMDLQRVSAKEKITMSVPLHFKGETEAPGVKD 126 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----SQLN 178 +GG L + V + C ++P+ + VD++ L++ +SI + + LPE + + Sbjct: 127 EGGVLTKLLTSVEVRCLPVSLPEYLEVDVSKLRLDESISLSQLHLPEGVELTAAISHEED 186 Query: 179 ITIATIVAPIS 189 + I P + Sbjct: 187 RPLVNIHIPRA 197 >gi|224823793|ref|ZP_03696902.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] gi|224604248|gb|EEG10422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] Length = 192 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R+++G ++R LR G++PA++YG ++ + L + L + F T I Sbjct: 2 SYELIAAKREQLGTSASRRLRHAGKLPAVVYGANTEAVSVVLDHNPVYYALKEEGFHTGI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L L I E V+ +DYQ+ P +++H DF +V + V VP+ F+ + S +K Q Sbjct: 62 LNLVIDGEKQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLHFVGADASEAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G K++ V EV + +P I VDL+ ++ G +IH+ D++LPE + Sbjct: 122 GAKISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKLPEGVEITA 173 >gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax citrulli AAC00-1] gi|166223655|sp|A1TT74|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1] Length = 210 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 95/170 (55%), Gaps = 1/170 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFTGAEESPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +N V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S + Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSPV 170 >gi|92113647|ref|YP_573575.1| 50S ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] gi|122420093|sp|Q1QXD2|RL25_CHRSD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91796737|gb|ABE58876.1| LSU ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] Length = 215 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 107/192 (55%), Gaps = 9/192 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q LSA +R +GKG++R LR+ + + AIIYG P+PI L K + + Sbjct: 1 MSQ--FTLSAEVRHDLGKGASRRLRRENKKVAAIIYGGSKTPQPITLEKSAFYKAIEDEA 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F ++++ +D+ + VI +D Q P ++ HADF++V +T++VP+ E Sbjct: 59 FFSSVINIDLEGQSEQVIIRDIQRHPYKALVTHADFMRVDATHEITMNVPLHINGEEACK 118 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K + G L+V+ ++V + C +P+ + VD+ +L +G+++H+ D+ LPE S ++ Sbjct: 119 GVKDEDGVLHVLANDVEISCLPGKLPEYLEVDVTNLGLGETLHLSDLPLPEGVSLVALSH 178 Query: 176 --QLNITIATIV 185 + + + ++ Sbjct: 179 GEEHDFGVVSVT 190 >gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] Length = 215 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + L A R+ GKG++R LR+ ++PAI+YG P I+L KD++K L ++ Sbjct: 1 MST-DFTLHAKGREDTGKGASRRLRRLAAEVPAIVYGGKKTPAQISLIHKDVAKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ LDI + VI KD Q P+ +++H DFL+V++ + + P+ FINE+ Sbjct: 60 FYSHVIALDIDGKSEDVILKDVQRHPIKPVILHLDFLRVNKKTLLQTKAPIHFINEDICV 119 Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K GG L E+ + C ++P+ I VD+ ++IG ++H+ DI P+ S++ Sbjct: 120 GVKIGGGLIAHTMTEIDISCLPQDLPEYIEVDMAAVEIGQTLHISDIVFPKGVESVALSH 179 Query: 176 --QLNITIATIVAPI 188 ++ I +I P Sbjct: 180 GPDHDLPIVSINKPK 194 >gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] Length = 213 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R++G +P I+YG +P I + + K+L + F Sbjct: 1 MAGEIPDLEVTARTGTGKGAARQARRDGLVPGIVYGGGEEPLAINIPYNVLFKKLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + + V VI + Q D V D+ H D +++ + + + +PV F E+ P Sbjct: 61 LSTLFNLKVEGHDDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIALFIPVEFEGEDDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI++GG L+VV EV L+ A +IP+ +T + L+IGD+I + I LP + + Sbjct: 121 GIRKGGLLSVVRPEVELVVTAGDIPEKLTASIAGLEIGDTITISSIELPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 I I AP Sbjct: 181 VIGNIAAPAG 190 >gi|330811725|ref|YP_004356187.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379833|gb|AEA71183.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 200 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNEFTLNAEVRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L+IG +V+ K Q P ++HADF++V G +T VPV F+ E I Sbjct: 61 SHIIELNIGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVGEAAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL D ++G IH+ D++ P+ + + Sbjct: 119 KKGGEISHVVSEIEVTCLPKDLPEFIEVDLADAEVGTIIHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia chaffeensis str. Arkansas] gi|109893362|sp|Q2GHW3|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia chaffeensis str. Arkansas] Length = 210 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 1/185 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R VG G +R LR +G+IPA+IYG D I+LS ++ + S Sbjct: 3 DQGIVKINASLRKNVGTGPSRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+I + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K GI Sbjct: 63 THLIELEIDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGI 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNIT 180 K+GG LN++ +S+ C I +I +DL+ L G SIH+ D++LP + + M + N Sbjct: 123 KRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPA 182 Query: 181 IATIV 185 I TI Sbjct: 183 IVTIS 187 >gi|91781712|ref|YP_556918.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia xenovorans LB400] gi|122970734|sp|Q145X3|RL25_BURXL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91685666|gb|ABE28866.1| LSU ribosomal protein L25P [Burkholderia xenovorans LB400] Length = 207 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQETNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP + ++ N I Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|163734579|ref|ZP_02142018.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] gi|161392072|gb|EDQ16402.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] Length = 212 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI + + K+L F Sbjct: 1 MAGEIPDLVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ + + + V VI +D Q V D+ H DF+++ + + + + V E ++P Sbjct: 61 KSTLFNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAVEVDGEEEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L ++ EV L+ A +IPD IT+D+++++IGD+I + + LPE + Sbjct: 121 GLKKGGVLTLIRPEVELIVTAGDIPDHITIDISEMEIGDNITISSVNLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIAQLSAPAG 190 >gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas neptunium ATCC 15444] gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + +R++ G G AR R NG +P ++YG DP I+L ++ K + + +F Sbjct: 1 MSKSQIVFNVEVRERTGTGGAREARNNGFVPGVLYGGGIDPVAISLKKNEVIKAIETGHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ TL E VIP+ Q+ PV+D +H D ++ + V VPV F SPG Sbjct: 61 LSATATLIHKGERQLVIPQGIQMHPVTDQPMHVDLRRIKVDQIIKVEVPVHFTGMEASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K+GG LNVV H V L PA IP+++ D++ L++GD++ + +I LPE + + + Sbjct: 121 LKKGGTLNVVRHSVELNVPAGKIPEALEADISKLEVGDNVKISNITLPEGAEPVITDRDF 180 Query: 180 TIATIVA 186 TIATI Sbjct: 181 TIATIAG 187 >gi|77460975|ref|YP_350482.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf0-1] gi|109893381|sp|Q3K6W3|RL25_PSEPF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77384978|gb|ABA76491.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1] Length = 200 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G +VI K Q P ++HADF++V G +T VPV FINE + Sbjct: 61 SHVIELNVGGTKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEAAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL + +IG +H+ DI+ P+ + + Sbjct: 119 KKGGEISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDIKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas sp. JS666] gi|123165230|sp|Q12E00|RL25_POLSJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91696413|gb|ABE43242.1| LSU ribosomal protein L25P [Polaromonas sp. JS666] Length = 227 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG +P I L + + + F ++L Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPSLIELDHNALWHAIKKEAFHASVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++G + V+ +D Q+ P ++H DF +V + +T+ VP+ + E +SP +K + Sbjct: 61 EMEMGGKTEKVLLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLHYSGEEESPAVKVEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 +N V E+S+ C ++P+ I ++L LK G S+H++DI LP+ ++ Q N + Sbjct: 121 CLVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPKGVKFVAKGGQDNPVL 180 Query: 182 ATIVA 186 ++ A Sbjct: 181 VSVSA 185 >gi|167031780|ref|YP_001667011.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida GB-1] gi|189042366|sp|B0KND5|RL25_PSEPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166858268|gb|ABY96675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida GB-1] Length = 197 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 103/184 (55%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHAASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAYSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV FI E +K+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFIGEEAP--VKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIATI 184 + V E+ + C A ++P+ I VDL + ++G IH+ D++ P+ + + +A + Sbjct: 124 SHVVSEIEVSCEAKDLPEFIEVDLANAEVGTIIHLSDLKAPKGVEFVALAHGDDKAVANV 183 Query: 185 VAPI 188 AP Sbjct: 184 HAPR 187 >gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71902209|ref|ZP_00684221.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M12] gi|226694605|sp|B0U5Y7|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12] Length = 207 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F Sbjct: 1 MAN--HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGDQRPVSIQLNHEQIWLAQQNEWF 58 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP Sbjct: 59 YSSILDLNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSP 118 Query: 120 GIKQGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--Q 176 K GG + +EV + C ++P+ I VDL+ L +G IH+ DI P + Sbjct: 119 AGKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLD 178 Query: 177 LNITIATIVA 186 +A ++A Sbjct: 179 KEHDMAVVIA 188 >gi|194364505|ref|YP_002027115.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia R551-3] gi|194347309|gb|ACF50432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stenotrophomonas maltophilia R551-3] Length = 206 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P ++L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAVSLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +IL L++ ++ V+ +D Q P +++H DFL+V+E +T VP+ FINE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFLRVNENEKLTASVPLHFINEDTSPA 119 Query: 121 IKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 K + EVS+ C ++P+SI VDL +LK GD +++ DI+LP+ + Sbjct: 120 GKAADVVVAHELKEVSISCLPKDLPESIEVDLGELKAGDIVYLSDIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25/general stress protein Ctc [Granulibacter bethesdensis CGDNIH1] gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1] Length = 219 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ A R + GKG+AR R+ G++PA+IYG P I L + I + L + + + Sbjct: 11 TQIEAEARSRAGKGAARATRREGKVPAVIYGARQTPDLIKLDPRIIHRELNRGGWRSRLY 70 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + +D Q PV+D H DF +++ G V V V V+F NE SPG+K+GG Sbjct: 71 EINVDGASTRALIRDVQFHPVTDAPEHVDFQRLAAGEPVRVAVAVQFQNEATSPGLKRGG 130 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 LN+V H V +LC +++P+ DL L IGD+I D++ + + + +AT+ Sbjct: 131 VLNIVRHTVEVLCDPDHVPEHFEADLGTLDIGDNIRWSDLKGTGEAKPTILDRDFVVATV 190 Query: 185 VAPIS 189 P + Sbjct: 191 APPTT 195 >gi|152985832|ref|YP_001350652.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PA7] gi|166223704|sp|A6VC67|RL25_PSEA7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150960990|gb|ABR83015.1| ribosomal protein L25, Ctc-form [Pseudomonas aeruginosa PA7] Length = 204 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R +GKG++R LR+ Q+PA+IYG +P+ + L ++I+K L ++ + ++ Sbjct: 6 LNAQVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSVTLELREIAKLLENEAAFSHVIA 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 L++G V+ K Q P ++HADFL+V +T HVP+ FINE+ + G+KQ GG Sbjct: 66 LNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEDVAVGVKQAGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIA 182 +++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + ++ +A Sbjct: 126 EISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVA 185 Query: 183 TIVA 186 I A Sbjct: 186 NIHA 189 >gi|187922591|ref|YP_001894233.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phytofirmans PsJN] gi|226736292|sp|B2SXG4|RL25_BURPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187713785|gb|ACD15009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phytofirmans PsJN] Length = 206 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQESNPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP S ++ N + Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVSLVAHVEAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|330818353|ref|YP_004362058.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] gi|327370746|gb|AEA62102.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] Length = 204 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERTLQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + +V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 61 DLEVAGKSQNVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ L+ G S+H +DI LP S ++ N I Sbjct: 121 AVVSHVVVELDIECLPAALPEFLEVDLSKLEAGQSVHAKDIVLPNGVSLVAHVDAENPVI 180 Query: 182 ATIVAPISG 190 AT P Sbjct: 181 ATATIPAGA 189 >gi|254525296|ref|ZP_05137351.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] gi|219722887|gb|EED41412.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] Length = 205 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ FINE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPA 119 Query: 121 IKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 K + EV++ C ++P+SI VDL DL GD +++ +I+LP+ + Sbjct: 120 GKAADVVVTHELKEVTISCLPKDLPESIEVDLADLAAGDVVYLSNIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] Length = 203 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H D V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDLQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVAPIS 189 N TI TI A S Sbjct: 181 NFTIVTISAADS 192 >gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia canis str. Jake] gi|109893361|sp|Q3YT12|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake] Length = 209 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 1/185 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 DQ K++A +R+ VG G AR +R+NG IPA++YG D + LS ++ + S Sbjct: 3 DQGIVKINASLRENVGTGPARAVRRNGGIPAVVYGKNRDSLSVFLSDREFLSKHRSAALS 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T ++ L+IG + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K G+ Sbjct: 63 THLIELEIGDKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGV 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNIT 180 K+GG LN++ +S+ C N I +I +DL+DL G SIH+ D+ LP + + + + N Sbjct: 123 KRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMKEHNPA 182 Query: 181 IATIV 185 I TI Sbjct: 183 IVTIS 187 >gi|296161527|ref|ZP_06844332.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] gi|295888171|gb|EFG67984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] Length = 205 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQESNPAVKLAS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP + ++ N I Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|70732481|ref|YP_262244.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf-5] gi|109893379|sp|Q4K689|RL25_PSEF5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68346780|gb|AAY94386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas fluorescens Pf-5] Length = 199 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAEVRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +V+ K Q P ++HADF++V G +T VPV FINE + Sbjct: 61 SHIIELNVGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEAAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---N 178 K+GG+++ V E+ + C ++P+ I VDL D +IG +H+ DI+ P+ ++ + Sbjct: 119 KKGGEISHVIAEIEVSCLPKDLPEFIEVDLADAEIGTIVHLSDIKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + +A + AP Sbjct: 179 LAVANVHAPR 188 >gi|302388649|ref|YP_003824470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] gi|302199277|gb|ADL06847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] Length = 210 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 3/187 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R GKG+ LR+NG++PA+ YG + + IA+ AK++ K L + + + Sbjct: 3 QVTLTAEERKLAGKGTLNELRRNGKVPAVFYGKNIENRTIAVDAKELHKLLKT-HGEGVL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G E VI K+ Q D + + H DF +VS + V +P+ E G+K G Sbjct: 62 IDLVLGGEKHTVIIKEIQRDALKGDITHVDFFRVSMTEKIEVDLPIVLKGE--PEGVKAG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L HE+++ +IP+ I VD++ L+IGD + ++DI+L +K + + + T+ Sbjct: 120 GVLQHQLHELTIEALPADIPEQIEVDISHLQIGDVLMVKDIKLSDKITVIDDPGEVVVTV 179 Query: 185 VAPISGS 191 +AP SG Sbjct: 180 LAPTSGE 186 >gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus watsonii C-113] gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus watsonii C-113] Length = 215 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 106/190 (55%), Gaps = 7/190 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R + GKG++R LR+ G++PA++YG +P + + + L F + IL Sbjct: 5 FELHADVRAEQGKGASRRLRRAGKVPAVLYGAAKEPISLIFDHNLLFRHLSHDAFYSHIL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 T+ + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG+KQ Sbjct: 65 TIHANGKAEKVVLKALQRDPVNPNKVLHLDLQRVSAAQKLTIKVPLHFIGDETAPGVKQE 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG + + ++V + C A ++P+ I VDL +L +G+++H+ D++LP + + Sbjct: 125 GGTVARLLNDVEVSCLAKDLPEYIEVDLANLGVGETVHLSDLKLPGGVEIPALKLGEDHD 184 Query: 179 ITIATIVAPI 188 + TI P Sbjct: 185 QPVVTIHKPR 194 >gi|71899973|ref|ZP_00682119.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] Length = 207 Score = 210 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ A R GKG++R LR G IPAIIYG P I L+ + I + F Sbjct: 1 MAN--HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNDWF 58 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++IL L++ V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP Sbjct: 59 YSSILDLNVDGAGDEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSP 118 Query: 120 GIKQGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--Q 176 K GG + +EV + C ++P+ I VDL+ L +G IH+ DI LP + Sbjct: 119 ADKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITLPIGVELSTRLD 178 Query: 177 LNITIATIVA 186 +A ++A Sbjct: 179 KEHDMAVVIA 188 >gi|104780084|ref|YP_606582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas entomophila L48] gi|166223705|sp|Q1IEY7|RL25_PSEE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|95109071|emb|CAK13767.1| 50S ribosomal subunit protein L25 (General stress protein CTC) [Pseudomonas entomophila L48] Length = 198 Score = 210 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 104/184 (56%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHSANIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV F+ E IK+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFVGEEAP--IKKGGEI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIATI 184 + V E+ + C A ++P+ I VDL+ ++G IH+ D++ P+ + + +A + Sbjct: 124 SHVVSEIEVSCEAKDLPEFIEVDLSKAEVGTIIHLSDLKAPKGVEFVALAHGDDKAVANV 183 Query: 185 VAPI 188 AP Sbjct: 184 HAPR 187 >gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] Length = 203 Score = 210 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LS +R GKG+AR R+ G +P I+YG+ +P+ I + + KRL + F Sbjct: 1 MTGKIPDLSVEVRMGTGKGAARQARREGYVPGIVYGDGKEPQAINVKYYTLLKRLKAGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I + V VI + Q D V D+ H DF+++ + S V + + V FIN SP Sbjct: 61 LQTLFNLKIEGQDDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHVTFINHEASP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD ITVDL IGD IH++D+ LPE + N Sbjct: 121 GLKRGGALVVVRPEVELEVTAGDIPDHITVDLAGRNIGDVIHIQDVVLPEGAAPTIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter denitrificans OCh 114] gi|122972523|sp|Q161I5|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114] Length = 212 Score = 210 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI + + K+L F Sbjct: 1 MAGEIPDLVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ + + + V VI +D Q V D+ H DF+++ + + + + V E+ +P Sbjct: 61 KSTLFNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAVEVEGEDVAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L ++ EV L+ A +IPD +T+D+++++IGD+I + + LPE + Sbjct: 121 GLKKGGVLTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNITISSVNLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIAQLSAPAG 190 >gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc [Citromicrobium bathyomarinum JL354] Length = 226 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD+ GKG++R LR+ G++PA+IYG +P PI + +++ ++L + +FM +I+ Sbjct: 5 ITLPAETRDRAGKGASRALRREGRVPAVIYGGKEEPTPIHVEERELVRQLDTGHFMNSII 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++G + V +PKD L PV+D H DFL++++G+ V V VPV F++E +SPG+K+GG Sbjct: 65 ELEVGGKKVRTLPKDVALHPVTDRPEHVDFLRLTKGAKVDVSVPVVFVDEEESPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 LNVV HE+ L+C A+ IP IT+ + ++GDSIH+ ++ LP+ + +++ + TIAT+ Sbjct: 125 VLNVVRHELELVCEADKIPGEITISVKGKEVGDSIHISEVDLPKGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|298368586|ref|ZP_06979904.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] gi|298282589|gb|EFI24076.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] Length = 190 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 103/186 (55%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R++ G G++R LR+ GQIPAI+YG P I++ K I L ++F T + Sbjct: 2 SYEIQAAIREQQGTGASRRLRREGQIPAILYGEDQKPISISVDHKTIFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P + H DF V + + VP+ +N S +K Q Sbjct: 62 IKLALNGKTYDVIVRDFQMHPFRREVQHIDFQVVKANQLLRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L +NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|254495954|ref|ZP_05108862.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] gi|254354832|gb|EET13459.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] Length = 220 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M L A R +GKG++R LR+ ++PA+IYG P I + K L +++ Sbjct: 1 MSN--ILLEAESRTDMGKGASRRLRRLENKVPAVIYGGEKKPMSIHFQHNKVIKALETES 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++ + I ++ HVI K Q P +++H D +VS+ + VP+ F+NE ++P Sbjct: 59 IYSSVFDITIDGKVEHVILKALQRHPYKPLVMHMDLQRVSKKDVLVKLVPLHFVNEQQAP 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-- 177 GIK GG +N ++ + C A ++P+ I VD+ + + D IH+ +++LP+ L Sbjct: 119 GIKAGGMINHTMTQIEIRCQAKDLPEFIEVDMAKVALDDVIHLSNLKLPKGVHLTVDLAD 178 Query: 178 ---NITIATIVAPI 188 + + +I P Sbjct: 179 HSHDSPVVSIHMPR 192 >gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax paradoxus EPS] gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus EPS] Length = 223 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 K A R K G G++R LR +G+ P I+YG P+ I + + L + F ++I Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGLQPQLIEIDHNALWHALKKEAFHSSI 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++G V+ +D Q P ++ H DF +V + + + VP+ F E +S +K Sbjct: 61 LEMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLHFKGEEESEAVKTA 120 Query: 125 GKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITI 181 L N V E+ + C +++P+ I VDL+ L ++H+ DI+LP+ +S N I Sbjct: 121 HNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKGVKYVSHGKQNPVI 180 Query: 182 ATIVAPI 188 + V P+ Sbjct: 181 VSAVPPL 187 >gi|302338328|ref|YP_003803534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] gi|301635513|gb|ADK80940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] Length = 209 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 111/188 (59%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+QK L+ R ++ KG+AR LR+ G+IPAIIYG+ S+P PI++ A + K+ YS Sbjct: 1 MEQK--TLTGFARTELKKGAARRLRREGKIPAIIYGH-SEPVPISVPANEFEKK-YSDLS 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TI+T+ +G + V+ KDYQ + + + H DF ++ G + HVP+ + + G Sbjct: 57 ESTIITISVGGKEYDVLIKDYQENTMRGEVTHLDFFEIERGKKLKTHVPLHAVG--TAQG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L + HE+ + C +IP + +++ + IGDS H+ D+ +PE + + ++ Sbjct: 115 VKEGGILELGFHEIEIECLPKDIPSHLEINIEGMAIGDSRHISDMSVPEGVTVLVSTDMV 174 Query: 181 IATIVAPI 188 A+I P Sbjct: 175 AASITTPK 182 >gi|121607939|ref|YP_995746.1| 50S ribosomal protein L25/general stress protein Ctc [Verminephrobacter eiseniae EF01-2] gi|166223729|sp|A1WGH1|RL25_VEREI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121552579|gb|ABM56728.1| LSU ribosomal protein L25P [Verminephrobacter eiseniae EF01-2] Length = 235 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 95/170 (55%), Gaps = 1/170 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I L + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQMIELDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P ++H DF +V + + + + VP+ + +S +K Sbjct: 61 DMEVAGKTDKVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKVPLHYSGSEESNAVKVDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +N++ +E+ + C +++P+ I VDL+ L+ G S+H++DI+LP + + Sbjct: 121 CMVNLIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPRGVTPV 170 >gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa Temecula1] gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M23] gi|71153679|sp|Q87A23|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694604|sp|B2IA79|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1] gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella fastidiosa M23] gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa subsp. fastidiosa GB514] Length = 207 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F Sbjct: 1 MAN--HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWF 58 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++IL L++ V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP Sbjct: 59 YSSILDLNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSP 118 Query: 120 GIKQGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--Q 176 K GG + +EV + C ++P+ I VDL+ L +G IH+ DI P + Sbjct: 119 AGKVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLD 178 Query: 177 LNITIATIVA 186 +A ++A Sbjct: 179 KEHDMAVVIA 188 >gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Mississippi] Length = 218 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 2/188 (1%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + Sbjct: 1 MSHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K Sbjct: 61 IFSQLIKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K GG LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N Sbjct: 121 GVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEEN 180 Query: 179 ITIATIVA 186 IA++ A Sbjct: 181 PVIASVSA 188 >gi|145590100|ref|YP_001156697.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189042364|sp|A4T069|RL25_POLSQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145048506|gb|ABP35133.1| LSU ribosomal protein L25P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 213 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+I + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 61 DLEIDGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFTNADTSAAVKLQG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNITI 181 ++ + E+ + C ++P+ + VDL +++G IH +DI LP+ + + Q N + Sbjct: 121 AVISHILTELEVSCLPADLPEFVEVDLAKIEVGHGIHAKDIALPKGVTLVLHVEQENPVL 180 Query: 182 ATIVAPI 188 A P Sbjct: 181 ANARIPA 187 >gi|149925764|ref|ZP_01914028.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] gi|149825881|gb|EDM85089.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] Length = 195 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 100/183 (54%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR+ GQ+P I+YG + + +++ + L + F ++IL Sbjct: 1 MKVVATSRTEQGSGASRRLRRAGQVPGIVYGANQEAQAVSIEHNPLWHALQKEKFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I + V+ +DYQ P L+H DF ++ + ++VP+ F +SP +K Sbjct: 61 DLEIDGKSQQVLLRDYQSHPYKPQLLHIDFQRIDGNQKIHMNVPLHFSGHLESPAVKLYA 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQL--NITI 181 G++ V +++ + C ++P+ I VD + L + SIH+ +++ PE S + ++++ Sbjct: 121 GQVTFVANQIEIECLPKDLPEFIAVDCSVLDVTKRSIHVTELQFPEGVSIPNHGQQDLSV 180 Query: 182 ATI 184 T+ Sbjct: 181 VTV 183 >gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. St. Maries] gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] gi|68053041|sp|Q5P9A5|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries] gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] Length = 218 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 2/188 (1%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + Sbjct: 1 MSHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K Sbjct: 61 IFSQLIKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K GG LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N Sbjct: 121 GVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEEN 180 Query: 179 ITIATIVA 186 IA++ A Sbjct: 181 PVIASVSA 188 >gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Puerto Rico] gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Virginia] Length = 217 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 2/188 (1%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + Sbjct: 1 MSHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K Sbjct: 61 IFSQLIKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K GG LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N Sbjct: 121 GVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEEN 180 Query: 179 ITIATIVA 186 IA++ A Sbjct: 181 PVIASVSA 188 >gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella avium 197N] gi|109893346|sp|Q2KYA2|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N] Length = 198 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIFHALRKEQFHASIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 T+ + G V+ + Q P ++H DF +V + VP+ F+N SP +K Sbjct: 61 TMALEGGANEQVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFVNAETSPAVKLS 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIA 182 G ++ V EV + C ++P I VDL +L G SIH +DI LP+ + I Sbjct: 121 GAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPKGVTFTHPNDEQVIV 180 Query: 183 TIVA 186 + V Sbjct: 181 SAVV 184 >gi|148546001|ref|YP_001266103.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida F1] gi|166223707|sp|A5VYF9|RL25_PSEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148510059|gb|ABQ76919.1| LSU ribosomal protein L25P [Pseudomonas putida F1] gi|313497087|gb|ADR58453.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1] Length = 197 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + + Sbjct: 3 DFILNAQARTDLGKGASRRLRHSLSIPAVVYGGDKEAQSLTILAKEITKLFENEAAFSHV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ +VI K Q P ++HADF++V G +T VPV FINE +K+G Sbjct: 63 IELNVDGVKQNVIIKAMQRHPAKQFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VKKG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + + Sbjct: 121 GEISHVESEIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFVALAHGDDKAV 180 Query: 182 ATIVAPI 188 A + AP Sbjct: 181 ANVHAPR 187 >gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] gi|254801033|sp|B9KHC7|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] Length = 218 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 2/188 (1%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + Sbjct: 1 MSHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K Sbjct: 61 IFSQLIKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K GG LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N Sbjct: 121 GVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEEN 180 Query: 179 ITIATIVA 186 +A++ A Sbjct: 181 PVVASVSA 188 >gi|270159183|ref|ZP_06187839.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|289165989|ref|YP_003456127.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] gi|269987522|gb|EEZ93777.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|288859162|emb|CBJ13091.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] Length = 218 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M L A R +GKG++R LR+ Q+PA+IYG P I + K L +++ Sbjct: 1 MSN--ILLEAQTRTDMGKGASRRLRRLENQVPAVIYGGDKKPTSIHFQHNKVIKALETES 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++ + + ++ HVI K Q P +++H D +VS+ + VP+ FINE K+P Sbjct: 59 IYSSVFDITVDGKVEHVILKALQRHPYKPVVMHMDLQRVSKTDVLVKLVPIHFINEEKAP 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--- 176 GIK GG +N +V + C A ++P+ I VD++++K+ D +H+ ++LP+ Sbjct: 119 GIKAGGIINHTMTQVEVRCQAKDLPEFINVDMSEVKVDDIVHLSHLKLPKGVQLTVDVTD 178 Query: 177 --LNITIATIVAPI 188 + + +I P Sbjct: 179 GSHDAPVVSIHMPK 192 >gi|134096054|ref|YP_001101129.1| 50S ribosomal protein L25/general stress protein Ctc [Herminiimonas arsenicoxydans] gi|166223689|sp|A4G921|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|133739957|emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC) [Herminiimonas arsenicoxydans] Length = 210 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R+ +G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 1 MKVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ FIN SP +K Q Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQA 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ V E+ + C N+P+ + VDL L++G SIH+ DI+LP+ ++ + N TI Sbjct: 121 GIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTI 180 Query: 182 ATIVAPIS 189 AT P Sbjct: 181 ATAAVPAG 188 >gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] Length = 221 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ ++A +R +GKG++R LR++ IPAIIYG DP P+ + KD+ K L ++ Sbjct: 1 MS-EQLAIAATVRSDLGKGASRRLRRSVDHIPAIIYGAGKDPAPLTIVRKDLEKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ + + ++ I KD Q P + ++HADFL+V + V++P+ FINE K Sbjct: 60 FYSQVIDVSVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVNIPLHFINEEKCH 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 G+K +GG + + E+ +LC IP+ I VD+ ++ D IH+ D++LPE Sbjct: 120 GVKIEGGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHISDLKLPEGVVSTALEL 179 Query: 174 MSQLNITIATIVAPISG 190 ++ + ++ A G Sbjct: 180 GEDHDMAVTSVSAKRGG 196 >gi|325277193|ref|ZP_08142836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] gi|324097679|gb|EGB95882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] Length = 199 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 105/184 (57%), Gaps = 5/184 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + ++ L Sbjct: 6 LNAQARTDLGKGASRRLRHSASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ K Q P ++HADF++V G +T VPV FINE +K+GG++ Sbjct: 66 NVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEEAP--VKKGGEV 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITIATI 184 + V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ + + +A + Sbjct: 124 SHVESQIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDKAVANV 183 Query: 185 VAPI 188 AP Sbjct: 184 HAPR 187 >gi|58583225|ref|YP_202241.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625061|ref|YP_452433.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|68053027|sp|Q5GWR5|RL25_XANOR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893406|sp|Q2NZW8|RL25_XANOM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58427819|gb|AAW76856.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369001|dbj|BAE70159.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 211 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 6/186 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDIQRHPFKQLIMHIDFQRVSANQKLSAAVPLHFINEEASPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP + Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKER 182 Query: 178 NITIAT 183 ++ + Sbjct: 183 DVAVVA 188 >gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] Length = 204 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 6/184 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + + V+ + Q ++H DF +V + VP FIN SP +K Sbjct: 61 QMALEGAAKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPFHFINAEVSPAVKL 120 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 GG ++ V E+ + C +P I VDL DL G S+H+ DI+LP+ + + N Sbjct: 121 GGAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLADIKLPKGVTYVPHGGDANP 180 Query: 180 TIAT 183 +A Sbjct: 181 LLAA 184 >gi|88810857|ref|ZP_01126114.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] gi|88792487|gb|EAR23597.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] Length = 233 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A +R GK ++R LR+ ++PAI+YG D +AL + + + + F + I Sbjct: 4 ELKLDAAVRTDQGKSASRRLRRAKKLPAILYGAKKDAIALALDEEQVMGLMRDETFFSQI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + ++IG I KD Q PV +++H D +V+ G + VP+ FINE K+ G+KQ Sbjct: 64 IDVNIGDTTERAILKDLQRHPVKPLVVLHMDLQRVTAGQKLRQRVPLHFINEEKAVGVKQ 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG L+ +V + C ++P I VD+ L + ++ H+ D++LP+ + + Sbjct: 124 GGTLHHDLLDVEIECLPRHLPAYIEVDIATLGLDEAYHLSDLKLPKGVVLTALGDDPDHD 183 Query: 179 ITIATIVAPI 188 ++ +I P Sbjct: 184 TSVVSIYTPR 193 >gi|220932954|ref|YP_002509862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] gi|254801051|sp|B8D015|RL25_HALOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219994264|gb|ACL70867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] Length = 218 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 99/185 (53%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A +R GKG AR LR+NG IP +IYG P+P+A+ AKD++K + + Sbjct: 1 MERYNLKAEVRKDTGKGVARKLRRNGLIPGVIYGKTRKPQPLAVDAKDLNKVVGGNAILD 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L +E + KD Q DPV ++H DF +S +TV VPV + + G+ Sbjct: 61 MTLVDGDKEEKETAVVKDLQRDPVQGNILHVDFQHISMTDKLTVSVPVHIVG--NARGVV 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + E+ + C +IPD I VD+ DL +GDS+ + DI P T ++ + I Sbjct: 119 AGGVLQQLAREIEVECLPTDIPDEIEVDITDLGLGDSLSVGDIEPPANTDFITPEDEVIV 178 Query: 183 TIVAP 187 TIVAP Sbjct: 179 TIVAP 183 >gi|166710809|ref|ZP_02242016.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzicola BLS256] Length = 211 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 6/186 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE+ SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEDASPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP + Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKER 182 Query: 178 NITIAT 183 ++ + Sbjct: 183 DVAVVA 188 >gi|319638120|ref|ZP_07992883.1| 50S ribosomal protein L25 [Neisseria mucosa C102] gi|317400393|gb|EFV81051.1| 50S ribosomal protein L25 [Neisseria mucosa C102] Length = 190 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGEAKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVIALPANIPAFLELDCTSVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|261380302|ref|ZP_05984875.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] gi|284796815|gb|EFC52162.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] Length = 190 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] gi|172047325|sp|A5EWV0|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] Length = 225 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 10/197 (5%) Query: 1 MDQKECK--LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M +++ + L AV+R++ GKG++R LR+ G +PAIIYG ++P+ IA+ ++ K + Sbjct: 1 MAEQKYRYTLHAVVREEQGKGASRRLRRQGLVPAIIYGGNTEPQAIAIKQDELKKNAKNH 60 Query: 59 NFMTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +F + I+ L I E ++ +D Q + H DF ++ G +T V + F+ E + Sbjct: 61 SFFSQIINLKIDGQEDQEILVRDVQHHIYKPLFQHFDFQRIVRGQEITATVLLEFVGEER 120 Query: 118 SPGIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +PGIK GG ++ V ++C + +P+ I VDL++ IGD I + D++LPE + Sbjct: 121 APGIKTDGGIVSRHMTTVEVICRPSLLPEYIAVDLSEANIGDIITLADLKLPEGVRLVGD 180 Query: 177 LN------ITIATIVAP 187 + + I P Sbjct: 181 MEDEEFAATVVVQISYP 197 >gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomicrospira crunogena XCL-2] gi|109893402|sp|Q31IN4|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2] Length = 193 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 10/192 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKN 59 M Q +A +R + GKG++R LR G++PAIIYG D K IAL + I + L + Sbjct: 1 MSQ---VWTAELRTEEGKGASRRLRHAGKVPAIIYGGDVDAKSIALKSNQIERALKLDVD 57 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++LTL+ + + I KD Q P + + H DF + S+ + VT VP++F + SP Sbjct: 58 LYNSVLTLEGAGDAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPLKFKGKESSP 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 G+K GG ++ + V + C A ++P +I VD+++L+ G ++ + + LP+ Sbjct: 118 GVKMGGLMSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKGVKLTALTHG 177 Query: 175 -SQLNITIATIV 185 + + + I Sbjct: 178 NTDYDQAVVGIS 189 >gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium petroleiphilum PM1] gi|166223695|sp|A2SKU2|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1] Length = 214 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R+ G G++R LR +G++P I+YG +P I L + L + F ++L Sbjct: 1 MKFVAYPRELQGTGASRRLRISGKVPGIVYGAG-EPLKIELDHNALFHALKKEAFHASLL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 ++ + V+ +D Q+ ++H DF +V + VT VP+ F+NE +PG+K Sbjct: 60 DMEFNGKSQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLHFVNEENAPGVKLDK 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--SQLNITIA 182 G ++ V E+ + C A+ +P+ +TVDL +L G S+H+ D++LP + + N IA Sbjct: 120 GLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPSVKVVLRGKKNPVIA 179 Query: 183 TIV 185 T+V Sbjct: 180 TVV 182 >gi|254804741|ref|YP_003082962.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|261400188|ref|ZP_05986313.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296313504|ref|ZP_06863445.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|313668661|ref|YP_004048945.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica ST-640] gi|254668283|emb|CBA05191.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|269210188|gb|EEZ76643.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296839947|gb|EFH23885.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|309379435|emb|CBX22002.1| 50S ribosomal protein L25 [Neisseria lactamica Y92-1009] gi|313006123|emb|CBN87584.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica 020-06] gi|325127982|gb|EGC50881.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis N1568] gi|325133985|gb|EGC56640.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13399] Length = 190 Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella parapertussis 12822] gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella bronchiseptica RB50] gi|71153123|sp|Q7WNY3|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153125|sp|Q7W180|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis] gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50] Length = 204 Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 + I G + V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 61 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLS 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + + N Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180 Query: 181 IATIVA 186 IA V Sbjct: 181 IAAAVV 186 >gi|319779110|ref|YP_004130023.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] gi|317109134|gb|ADU91880.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] Length = 212 Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++P I+YG +P I L +I L + F +++L Sbjct: 1 MKFTAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +D+ + V+ + Q ++H DFL+V G +T VP+ FIN+ SP +K G Sbjct: 61 EMDLDGKTETVLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFINDEVSPAVKLHG 120 Query: 126 KL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 L + + E+ + C ++P I VDL++L+ +H+ I+ P + ++ + Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIKPPAGVEFTGHNPEEDMVL 180 Query: 182 ATIVAPI 188 A+ +P Sbjct: 181 ASASSPR 187 >gi|255065136|ref|ZP_05316991.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] gi|255050557|gb|EET46021.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] Length = 190 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAYLDLDCTKVVAGDILHLSDIQLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|170723623|ref|YP_001751311.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida W619] gi|226736353|sp|B1JEQ2|RL25_PSEPW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169761626|gb|ACA74942.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida W619] Length = 198 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 107/187 (57%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A +R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + + Sbjct: 3 DFTLNAQVRSDLGKGASRRLRHSLNIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ +V+ K Q P ++HADF++V G +T VPV FINE +K+G Sbjct: 63 IELNVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEEAP--VKKG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G+++ V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ + + + Sbjct: 121 GEISHVESQIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFVALAHGDDKAV 180 Query: 182 ATIVAPI 188 A + AP Sbjct: 181 ANVHAPR 187 >gi|240013762|ref|ZP_04720675.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI18] gi|240120830|ref|ZP_04733792.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID24-1] gi|293399412|ref|ZP_06643565.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] gi|291609981|gb|EFF39103.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] Length = 190 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|240127840|ref|ZP_04740501.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-93-1035] gi|268686237|ref|ZP_06153099.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] gi|268626521|gb|EEZ58921.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] Length = 190 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSMLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis excentricus CB 48] gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis excentricus CB 48] Length = 195 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 68/182 (37%), Positives = 104/182 (57%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L +R++ G G AR R G++P I+YG P IA+ + K LY+ + Sbjct: 3 DIVLDVEIRERTGTGGARATRNEGKVPGILYGGDKAPVAIAVKLNEFRKALYTGKLAGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI K PV+D+ +H D +V E T+ ++VPV F N SPGIK+G Sbjct: 63 VTLKYGEETQKVIAKAIDFHPVTDVPVHFDLYRVDETQTIKINVPVHFKNHEASPGIKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V HE+ + PA +IP+ + VDL+ L IG S+H+ D+ LP +++ ++ IA+I Sbjct: 123 GALTVAFHELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSLPSDVTAVPGKDVVIASI 182 Query: 185 VA 186 A Sbjct: 183 TA 184 >gi|240080344|ref|ZP_04724887.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA19] gi|268596490|ref|ZP_06130657.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] gi|268550278|gb|EEZ45297.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] Length = 190 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +ATI Sbjct: 182 VATITG 187 >gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis Z2491] gi|71153153|sp|Q9JUX7|RL25_NEIMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121051996|emb|CAM08305.1| hypothetical protein NMA1094 [Neisseria meningitidis Z2491] gi|319410237|emb|CBY90577.1| 50S ribosomal protein L25 [Neisseria meningitidis WUE 2594] Length = 190 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|292493880|ref|YP_003529319.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] gi|291582475|gb|ADE16932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] Length = 211 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 106/190 (55%), Gaps = 7/190 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R + GKG++R LR+ G++PAI+YG +P + L + + L + F + IL Sbjct: 5 FELHADVRGEQGKGASRRLRRAGKVPAILYGAGKEPVSLTLDHNLLFQHLGYEAFYSHIL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 T+ + + K Q DP + + ++H D +VS +++ V + F+ ++ + G++Q Sbjct: 65 TIHANGKTEKAVLKALQRDPANPNKVLHLDLQRVSPTQKLSISVHLHFMGDDVARGVRQE 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG + + ++V + C A ++P+SI VDL DL G+++H+ D++LPE + + Sbjct: 125 GGVVARLLNDVEITCLAKDLPESIEVDLTDLGAGEALHLSDLKLPEGVEIPALKLGEDYD 184 Query: 179 ITIATIVAPI 188 + TI P Sbjct: 185 QPVVTIHKPR 194 >gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium praevalens DSM 2228] Length = 222 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 3/187 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + A +R + GKG+AR +R++G IP ++YG +DP+ I + DI K L+S Sbjct: 1 MERHSIEAELRTETGKGAARTIRRDGLIPGVVYGRGNDPRSIKVDPLDIEKLLHSNAIFD 60 Query: 63 TILTLDIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + G E VI KDYQ D + L+H DF +S +TV VP+R E + G+ Sbjct: 61 LTFVGEDGGEDEATVIIKDYQKDVIKQNLLHVDFQFISMDEKITVSVPMRL--EGDALGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG L + E+ + IP+ IT+D+++L++G+S+ + D+ L E +++ + I Sbjct: 119 RNGGVLQHLLREIEIDALPAEIPEEITIDISELEVGESLAVADLELSEGLDLVTESDEVI 178 Query: 182 ATIVAPI 188 T+V P Sbjct: 179 VTVVTPT 185 >gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus xanthus DK 1622] gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus xanthus DK 1622] Length = 220 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M L A R+ GKG AR LR G IPA++YG + P I+++ K + + + + + Sbjct: 1 MSVNTSTLEAKPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHISVNPKAVRQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ + + V+ KDYQ+DPV+ ++HADFL V V V+VP+ ++ Sbjct: 61 KFNTLIQIKVEGGDRQVLLKDYQMDPVTRAILHADFLDVRPTDKVKVNVPLVLSG--RAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L E+ + IP+ I VD+ +KI + +H+ D++LPE S + +N Sbjct: 119 GVADGGLLTQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHINDLKLPEGVSVKTNVNY 178 Query: 180 TIATIVAPIS 189 T+A I AP + Sbjct: 179 TLAVISAPEA 188 >gi|196229514|ref|ZP_03128379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] gi|196226746|gb|EDY21251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] Length = 281 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K+ KL+A+ R + G+ + +++ G +PA++YG P ++++A++I L Sbjct: 1 MA-KQQKLTALTRTETGRSAVNKIKQQGLVPAVVYGGKEQPINLSVNAREIRNILAHATS 59 Query: 61 MTTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ L+I K + ++ Q DP+ ++H DF V + +PV + E Sbjct: 60 EHFLVDLEIADGSNKSNRLALVQEVQHDPLKGDVLHVDFHAVKADEKLHAEIPVETVGE- 118 Query: 117 KSPGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G+K GG L + H + + C ++P+ IT+D++ L +G+ IH++DI+ PE ++ Sbjct: 119 -PAGVKNYGGILEISMHAIEVECLPKDLPEIITLDVSALNVGEGIHIKDIKFPEGVTTHV 177 Query: 176 QLNITIATIVAPI 188 +T+ + AP Sbjct: 178 DGELTVVRVSAPT 190 >gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA 1090] gi|194098189|ref|YP_002001237.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae NCCP11945] gi|239998640|ref|ZP_04718564.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae 35/02] gi|240016200|ref|ZP_04722740.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA6140] gi|240115294|ref|ZP_04729356.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID18] gi|240123136|ref|ZP_04736092.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID332] gi|240125385|ref|ZP_04738271.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-92-679] gi|254493356|ref|ZP_05106527.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|260440889|ref|ZP_05794705.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|268594494|ref|ZP_06128661.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268600974|ref|ZP_06135141.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268681764|ref|ZP_06148626.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268683986|ref|ZP_06150848.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291044213|ref|ZP_06569922.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|68053023|sp|Q5F9F4|RL25_NEIG1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736341|sp|B4RKF2|RL25_NEIG2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|59717778|gb|AAW89183.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933479|gb|ACF29303.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae NCCP11945] gi|226512396|gb|EEH61741.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|268547883|gb|EEZ43301.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268585105|gb|EEZ49781.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268622048|gb|EEZ54448.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268624270|gb|EEZ56670.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291011107|gb|EFE03103.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|317163911|gb|ADV07452.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae TCDC-NG08107] Length = 190 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|121634651|ref|YP_974896.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis FAM18] gi|166223696|sp|A1KTB7|RL25_NEIMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120866357|emb|CAM10100.1| hypothetical protein NMC0817 [Neisseria meningitidis FAM18] gi|254673308|emb|CBA08446.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha275] gi|325132289|gb|EGC54982.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M6190] gi|325142126|gb|EGC64551.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 961-5945] gi|325144239|gb|EGC66545.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240013] Length = 190 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa 9a5c] gi|71153678|sp|Q9PA77|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c] Length = 208 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F Sbjct: 1 MAN--HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWF 58 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP Sbjct: 59 YSSILDLNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSP 118 Query: 120 GIKQGGKL-NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--Q 176 K G + +EV + C ++P+ I VDL+ L +G IH+ DI P + Sbjct: 119 AGKASGVVITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHLSDITFPIGVELSTRLD 178 Query: 177 LNITIATIVA 186 +A ++A Sbjct: 179 KEHDMAVVIA 188 >gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis Tohama I] gi|71153126|sp|Q7VUH2|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I] gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis CS] Length = 208 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F I Sbjct: 4 SMKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHALI 63 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + I G + V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 64 LNMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFINAEVSPAVKL 123 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 G ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + + N Sbjct: 124 SGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNP 183 Query: 180 TIATIVA 186 IA V Sbjct: 184 LIAAAVV 190 >gi|261379039|ref|ZP_05983612.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] gi|269144490|gb|EEZ70908.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] Length = 190 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|15676772|ref|NP_273917.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis MC58] gi|161869809|ref|YP_001598978.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis 053442] gi|304387809|ref|ZP_07369983.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|71153154|sp|Q9JZW3|RL25_NEIMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042363|sp|A9M423|RL25_NEIM0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7226114|gb|AAF41287.1| 50S ribosomal protein L25 [Neisseria meningitidis MC58] gi|161595362|gb|ABX73022.1| 50S ribosomal protein L25 [Neisseria meningitidis 053442] gi|254670387|emb|CBA05900.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] gi|261392771|emb|CAX50347.1| 50S ribosomal protein L25 [Neisseria meningitidis 8013] gi|304338074|gb|EFM04210.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|316985770|gb|EFV64714.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325135916|gb|EGC58526.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M0579] gi|325137740|gb|EGC60315.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis ES14902] gi|325139971|gb|EGC62500.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis CU385] gi|325198077|gb|ADY93533.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis G2136] gi|325200439|gb|ADY95894.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325202337|gb|ADY97791.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240149] gi|325203949|gb|ADY99402.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240355] gi|325206289|gb|ADZ01742.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M04-240196] gi|325207910|gb|ADZ03362.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NZ-05/33] Length = 190 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] gi|241319620|gb|EER56050.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] Length = 190 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP+I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPSILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] Length = 212 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 107/180 (59%), Gaps = 1/180 (0%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG 70 R + G G +R +R++G +PA++YG +P I L + K + + + + + Sbjct: 10 ERRQRAGTGGSRAVRRDGWVPAVLYGGDEEPLNIKLRYNQVLKAYQTGRLIDVLAKIKLE 69 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 VI +D Q+DPV D+ H D ++V + VTV+VP+RF+NE PG+K+GG LN+V Sbjct: 70 GGEQQVIGRDIQVDPVKDLPRHVDLMRVDARTKVTVNVPMRFLNEETCPGLKKGGVLNIV 129 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVAPIS 189 HEV ++ A NIP+++ DL +GD+IH+ ++LP+ + ++ + T+ATI AP + Sbjct: 130 RHEVEVVASATNIPEALEADLAGADVGDTIHISAVKLPDGVTPTITDRDFTVATIAAPSA 189 >gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] Length = 216 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A R G ++R LR+ G++PAI+YG + P I L +I L + F +I Sbjct: 13 SMKFIATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASI 72 Query: 65 LTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 L + + + V+ + Q ++H DF +V + VP+ F+N SP +K Sbjct: 73 LQMQLEGSKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEISPAVKL 132 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G ++ V E+ + C +P I VDL ++ G SIH+ DI+LP + + Sbjct: 133 AGAMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADIKLPMGVTYVPH 186 >gi|289663466|ref|ZP_06485047.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667603|ref|ZP_06488678.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 210 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEAASPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I VDL L++GD IH+ +I+LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGDVIHLSEIKLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A + A Sbjct: 183 DVAVVAA 189 >gi|319940809|ref|ZP_08015148.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] gi|319805691|gb|EFW02472.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] Length = 214 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR+ ++P IIYG + PI L I L + F +IL Sbjct: 1 MKVIATTRTTQGTGASRRLRRADKLPGIIYGGKNPATPIELEHNPIFFALRKEKFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 T+++ + V+ +D+Q+ P ++H DF +++ VT+ VP+ F E SP +K Sbjct: 61 TMELDGKEELVVLRDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLHFSGEELSPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ V + C ++P+ I VDL+ ++ G ++H D+ +PE ++ IA++ Sbjct: 121 CIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEGVKMVTD--SVIASV 178 Query: 185 VAPI 188 + P+ Sbjct: 179 IQPV 182 >gi|319787942|ref|YP_004147417.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] gi|317466454|gb|ADV28186.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] Length = 207 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 4/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++ R+ GKG++R LR++G++PAI+YG P I L + + ++ F ++IL L Sbjct: 6 INVERREDEGKGASRRLRRDGKVPAIVYGGELAPVSIQLDHEKLWLAQQNEWFYSSILDL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + ++ V+ +D Q P ++H DF +VS+ + VP+RF+NE KSP K G + Sbjct: 66 SLNGDVQKVLLRDMQRHPYKQQIMHLDFQRVSDDEVLRAAVPLRFVNEAKSPAGKTAGVV 125 Query: 128 -NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 EV++ C ++P++I VDL+DL +G +H+ ++LP + + +A Sbjct: 126 IMHELTEVNVACLPKDLPEAIEVDLSDLAVGGVVHLSGLKLPTGVEIPALALGPDHDVAV 185 Query: 184 IVA 186 +VA Sbjct: 186 VVA 188 >gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] Length = 198 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 106/182 (58%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L +R++ G G AR R +G++P ++YG P PIA++ K L + + Sbjct: 3 EIVLDVEVRERTGTGGARATRNDGKLPGVLYGGDKGPVPIAVNLNAFRKSLSTGKLNGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI K PV+D+ +H D +V E + + + VPV F N SPG+K+G Sbjct: 63 VTLKYGEETQKVIAKSIDFHPVTDVPVHFDLFRVDEHAKIRISVPVHFKNHELSPGLKKG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G LNV HE+ + PA++IP+ I +DL L+IG S+H+ D++LP S +++ +A++ Sbjct: 123 GALNVAFHELEIQVPADHIPEDIIIDLTGLEIGQSVHISDLKLPSDVSPVAKGLTVVASV 182 Query: 185 VA 186 A Sbjct: 183 TA 184 >gi|188992871|ref|YP_001904881.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. B100] gi|226694602|sp|B0RU99|RL25_XANCB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167734631|emb|CAP52841.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris] Length = 209 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEASSPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A ++A Sbjct: 183 DVAVVIA 189 >gi|241764085|ref|ZP_04762123.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] gi|241366616|gb|EER61097.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] Length = 213 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 103/188 (54%), Gaps = 5/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAYERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ V+ +D Q P +++H DF +V + + + + VP+ F N +S +K Sbjct: 61 DMEVAGTTSKVLLRDVQYHPYKQLVLHIDFQRVDDKTKLHMKVPLHFSNAEESDAVKVDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----QLNIT 180 +N V +E+ + C +++P+ I VDL+ LK G S+H++DI+LP+ S++ N Sbjct: 121 CMVNPVVNELDVTCMPSDLPEFIAVDLSTLKKGVSLHLKDIKLPKGVSAVIRGGQNNNPV 180 Query: 181 IATIVAPI 188 + ++ P+ Sbjct: 181 LVSVANPV 188 >gi|115378654|ref|ZP_01465804.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|310823076|ref|YP_003955434.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] gi|115364320|gb|EAU63405.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|309396148|gb|ADO73607.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] Length = 232 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M + L A R+ GKG+AR LR G +PA++YG + P +A++ K + + + + + Sbjct: 1 MSVDKSSLEAKAREGSGKGAARKLRAQGLVPAVVYGKHLEKPVHVAVNPKAVKQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ L + V+ KDYQ DP+S ++H DF+ V + V V+VP+ + K+ Sbjct: 61 KFNTLIQLKLDSATHQVLLKDYQTDPLSREILHVDFIDVRDNEQVKVNVPLVLVG--KAV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G GG L E+ + IP+ I VD+ LKI ++H+ DI+LP+ S + +N Sbjct: 119 GTADGGLLTQARRELEVWALPQAIPEKIEVDVTPLKIAQALHINDIKLPQGVSVKTNVNY 178 Query: 180 TIATIVAP 187 T+A + AP Sbjct: 179 TLAVVSAP 186 >gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25P [Magnetococcus sp. MC-1] gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus sp. MC-1] Length = 198 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN--FMTTI 64 V R+ +GKG AR LR+ G+IPA++YG + + ++ + + T+ Sbjct: 3 TFETVTREGLGKGVARKLRQQGRIPAVVYGAGKENISLEMNLNAFRVAIAGQGPTLFNTV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + ++ +V+ + Q PV+D+ H DFL++ +TVHVPV NE+++PG+K+G Sbjct: 63 HQLSVDGKVENVLVRGVQRHPVTDLPEHVDFLRLDPTKMITVHVPVHLRNEDQAPGLKRG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +V HE+ + C + NIP I VD +++IG SIH+EDI LPE T + +N T Sbjct: 123 GIIQIVRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIEDITLPEGTKVFTDVNFT 178 >gi|240112553|ref|ZP_04727043.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae MS11] gi|240117581|ref|ZP_04731643.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID1] gi|268598621|ref|ZP_06132788.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268603284|ref|ZP_06137451.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] gi|268582752|gb|EEZ47428.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268587415|gb|EEZ52091.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] Length = 190 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|171464201|ref|YP_001798314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226736348|sp|B1XS65|RL25_POLNS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171193739|gb|ACB44700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 214 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G ++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTSASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+IG + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 61 DLEIGGKTQKVLLRDYQMHPFKPLVLHIDFQRVSATKKVHMRVPLHFTNADTSAAVKLQG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNITI 181 ++ + E+ + ++P+ I VDL +++G IH +DI LP+ + + Q N + Sbjct: 121 AVISHIATELEVSYLPADLPEFIEVDLAKIEVGHGIHAKDIALPKGVTLILHVEQENPVL 180 Query: 182 ATIVAPI 188 A P Sbjct: 181 ANARIPA 187 >gi|308389048|gb|ADO31368.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha710] gi|325130024|gb|EGC52817.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis OX99.30304] Length = 190 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYETQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] Length = 202 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 6/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R+ GK +AR +R+ G +P I+YG+ +P P + + +Y+ T + Sbjct: 3 TITIEAKPRE-TGKRAARAIRREGWVPCILYGHHVEPIPFQMLESKLRPLIYTTE--THL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L + + I KD + PV+D +HADF + VTV VPV+ + + G+++G Sbjct: 60 VKLQLNGKTWDCILKDVEFHPVTDRPLHADFQVLRAEEKVTVTVPVQIVG--TAIGVQRG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L +V HE+ + C +IP I +D+++L IGD+IH+ D++ E + T+ I Sbjct: 118 GVLQIVTHELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQF-EGLEFEDAPDQTVVVI 176 Query: 185 VAP 187 AP Sbjct: 177 AAP 179 >gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma phagocytophilum HZ] gi|109893343|sp|Q2GII5|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma phagocytophilum HZ] Length = 211 Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 MD ++ K+ A +R++ G GSAR LR G IPA+IYG DP I+LS D K+ + Sbjct: 1 MDHEDMIKVDASVRERCGTGSARALRARGLIPAVIYGKNRDPINISLSQVDFLKKCRTFP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L IG++ +VI KD Q PVS + H DF V + + + + VP+ F+NE K Sbjct: 61 IFSKLIELCIGEKKEYVITKDIQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNEQKCV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+K+GG +N++ + + C ++IP S+ VDL D+ IG S+H+ D++LP + + + + Sbjct: 121 GVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVMKEED 180 Query: 179 ITIATIVAPISG 190 IAT+VA G Sbjct: 181 PVIATVVASGGG 192 >gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217] gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217] Length = 208 Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 3/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P I++G +P PI + + KRL F Sbjct: 1 MAGEIPDLQAQERAGTGKGAARAARREGMVPGIVFGGDKEPLPINIPFNALLKRLKKGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ + + + + V FIN P Sbjct: 61 KSTLFNLQVEGQDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINHENCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMS-QL 177 +++GG L VV +EV L A +IPD +TVDL+ + KIGD + + I LPE + + Sbjct: 121 ALRKGGVLTVVRNEVELTVTAGDIPDHLTVDLSKISKIGDVVTISMIDLPEGSEPVIKDR 180 Query: 178 NITIATIVAPIS 189 + I I AP + Sbjct: 181 DFVICNISAPSA 192 >gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54] Length = 204 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 2/173 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFTATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 + + + V+ + Q ++H DF +V + VP+ F+N SP +K Sbjct: 61 QMQLEGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLS 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G ++ V E+ + C + +P I V+L D+ G SIH+ DI+LP + + Sbjct: 121 GAIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIKLPMGVTYVPH 173 >gi|303256347|ref|ZP_07342363.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|330999042|ref|ZP_08322767.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] gi|302861076|gb|EFL84151.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|329575784|gb|EGG57310.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] Length = 217 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV R G G++R LR+ ++P I+YG PI L +I L + F +IL Sbjct: 1 MKFTAVTRKAQGTGASRRLRRAEKLPGIVYGGKVAATPIELDHNEIFHALRKEKFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQG 124 + + + V+ + +Q+ P ++H DF ++S + ++VP+ F+ E KSP I Sbjct: 61 EMVLDGKSERVLLRSFQMHPYKPQVLHIDFQRISADEQIRMNVPLHFVGEEKSPAITIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 +N E+ + C + +P+ ITVDL+ L + +H+ D+ LPE + + + + T+A Sbjct: 121 TNVNHALTELLVSCLPDQLPEFITVDLSGLTVDKPVHVSDLVLPEGVTPVLKPEEDPTVA 180 Query: 183 TIVA 186 + V Sbjct: 181 SAVV 184 >gi|21230347|ref|NP_636264.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769659|ref|YP_244421.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. 8004] gi|71153677|sp|Q8PC62|RL25_XANCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81304386|sp|Q4URC2|RL25_XANC8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21111900|gb|AAM40188.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574991|gb|AAY50401.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. 8004] Length = 209 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEAISPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A ++A Sbjct: 183 DVAVVIA 189 >gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] Length = 235 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 1/189 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + AV+R K LR G +P I+YG++ +++ + L + NF Sbjct: 1 MSSENNTIEAVLRSTKTKSELNKLRSEGFVPGILYGDIDKNINLSVKKSTLDHFLKTTNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +++ + V+P+D + + +S+ IH DF ++S + V V +PV+F+NE PG Sbjct: 61 KSKVFKINLDGKEYEVLPRDIEFENISNQPIHVDFQKLSTNTKVVVWIPVKFLNEETCPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K GG LN+V +V L CPA+ IP + VDL +IG+SIH+ I LPE + + Sbjct: 121 LKMGGVLNIVRRKVELDCPADKIPSELNVDLAKREIGESIHISAINLPEGVVPTIKDRDF 180 Query: 180 TIATIVAPI 188 TIAT+ AP Sbjct: 181 TIATVAAPT 189 >gi|21241720|ref|NP_641302.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas axonopodis pv. citri str. 306] gi|78046537|ref|YP_362712.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294666031|ref|ZP_06731293.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928009|ref|ZP_08189227.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] gi|71153676|sp|Q8PNT9|RL25_XANAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893405|sp|Q3BX01|RL25_XANC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21107089|gb|AAM35838.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str. 306] gi|78034967|emb|CAJ22612.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292604223|gb|EFF47612.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541623|gb|EGD13147.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] Length = 211 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A + A Sbjct: 183 DVAVVAA 189 >gi|330502027|ref|YP_004378896.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] gi|328916313|gb|AEB57144.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] Length = 204 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 5/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ + Sbjct: 4 EFALNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSH 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L+LD+ +V+ K Q P ++HADF +V G +T HVP+ FINE S G+KQ Sbjct: 64 VLSLDVAGTKENVLIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEASSVGVKQ 123 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 GG++ +EV + C ++P+ I VD+ + + ++H+ DI+LP+ + ++ Sbjct: 124 GGGEVLHALNEVEVSCLPKDLPEFIEVDMAKVAVDQTVHLSDIKLPKGVELVALAHGSDL 183 Query: 180 TIATIVAPI 188 +A+I P Sbjct: 184 PVASIHLPR 192 >gi|225076511|ref|ZP_03719710.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] gi|224952190|gb|EEG33399.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] Length = 190 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGESQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLYLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQVVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V + NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVAAFPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|77919599|ref|YP_357414.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter carbinolicus DSM 2380] gi|109893375|sp|Q3A313|RL25_PELCD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77545682|gb|ABA89244.1| LSU ribosomal protein L25P [Pelobacter carbinolicus DSM 2380] Length = 208 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q E L+ R+ +GKG+AR LR+ G IPA++YG + + + K ++ + S+ Sbjct: 1 MAQTE--LNVSQREGLGKGTARSLRREGLIPAVMYGKGVENCSLVVEPKQLAAIIGSEAG 58 Query: 61 MTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + +++TL + VI KD Q+DP+ +H DF + + V VP+ + KS Sbjct: 59 LNSLITLKGEGAFDGKVVILKDMQVDPIRQTPLHVDFQAIDLNAKTHVLVPLVVVG--KS 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G KQGG L ++ HEV L+C NIP +I VD+ L IGD++H++D++LPE +N Sbjct: 117 EGEKQGGNLQIIRHEVELVCLPANIPANIEVDVTALNIGDALHVQDVQLPEGVEIPQDVN 176 Query: 179 ITIATIVA 186 T+ T+ Sbjct: 177 FTVVTVTG 184 >gi|325914244|ref|ZP_08176594.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] gi|325539499|gb|EGD11145.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] Length = 211 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ F+NE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFVNEASSPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A + A Sbjct: 183 DVAVVAA 189 >gi|290959809|ref|YP_003490991.1| 50S ribosomal protein L25 [Streptomyces scabiei 87.22] gi|260649335|emb|CBG72450.1| 50S ribosomal L25 protein [Streptomyces scabiei 87.22] Length = 198 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KL A R + GKG+AR +R+ ++PA++YG+ +DP I L + L + N Sbjct: 1 MNMAEVKLEAETRTEFGKGAARRIRRASKVPAVVYGHGADPVHITLPGHALQLALRTPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L+LDI + IPK Q D + L H D L V G V V V V + +PG Sbjct: 60 --VLLSLDIDGKTQLAIPKAVQRDAIKGFLDHVDLLLVKRGEKVNVEVYVHTEG-DLAPG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 L V +++ A +IP+S+TV + L+ G SI +DI LP+ T+ + Sbjct: 117 A---YLLEHVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPKGTTLAIDEDAV 173 Query: 181 IATIVA 186 + ++A Sbjct: 174 VLQVLA 179 >gi|256374804|ref|YP_003098464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] gi|255919107|gb|ACU34618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] Length = 197 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+A R + GKG+AR R+ G+IPA++YG+ SDPK +AL A + ++ + ++ Sbjct: 1 MSEVRLAAEQRTEFGKGAARRTRRAGKIPAVLYGHGSDPKHLALPALEFARVVR-EHGQN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI + K P+ + + H D L V G VTV VP+ E + + Sbjct: 60 AVLTLDIDSATELALTKTVTTHPLKNYIEHVDLLLVKRGEKVTVDVPIVLTGEPAAATL- 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L + + A NIPD I + L G +H D+ LP+ ++ + + I Sbjct: 119 ----LTQESTTIQVEADALNIPDQIEFSIAGLGAGTQVHASDLELPKGSTLATDPEVLIL 174 Query: 183 TIV-APISGS 191 + AP + S Sbjct: 175 AVNDAPSAAS 184 >gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] Length = 203 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDPVQHGDFQFDVKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVAPIS 189 N TI TI A S Sbjct: 181 NFTIVTISAADS 192 >gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] Length = 231 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +RD VG GSAR R+ G +P ++YG P +A++ KD K LY+ + + Sbjct: 24 EIILNVDVRDGVGTGSARAARRAGFVPGVLYGGDKAPVAVAVNEKDFRKSLYTGKLLGHL 83 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G+E VI KD Q DPVSD +H D ++V + + + + VPV F N + +P ++QG Sbjct: 84 VTLKYGEETQPVIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEVPVYFKNADDAPFVRQG 143 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G L VV H V ++ A++IP+ + VDL ++GD+I DI LP+ ++ + IAT Sbjct: 144 GSLEVVRHAVEIMVKADSIPEELVVDLIKSQMGDTIRFSDIELPKGVEPTITDRDFVIAT 203 Query: 184 I 184 I Sbjct: 204 I 204 >gi|294627824|ref|ZP_06706403.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597738|gb|EFF41896.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 211 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ + V+ +D Q P +++H DF +VS ++ VP+ FINE SP K Sbjct: 63 ILDLNLNGGVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A + A Sbjct: 183 DVAVVAA 189 >gi|154246548|ref|YP_001417506.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] gi|226694603|sp|A7IIK6|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] Length = 203 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 85/183 (46%), Positives = 122/183 (66%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L AV R + GKG+AR R+ G++PA+IYG +P I+L+ ++I+K +Y+ +F+TT+ Sbjct: 6 ELKAVARPRAGKGAARAERRAGRVPAVIYGEKQEPVTISLNFREINKTIYAGHFLTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ VIP+DYQLD V D +H DFL+VS+G+TVTV VPV F+N+ SP +K GG Sbjct: 66 IDVDGTKHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVTVEVPVHFLNQEASPALKAGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V L CPA +IP S+ VDL GD+ H+ I+LP + + T+AT+VA Sbjct: 126 LNVVAHAVELECPAESIPASVEVDLTGAAYGDTFHLSGIKLPAGVTWAGHGDDTLATVVA 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25/general stress protein Ctc [Azorhizobium caulinodans ORS 571] gi|172047829|sp|A8HS67|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571] Length = 207 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 90/183 (49%), Positives = 129/183 (70%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L AV R + GKG+AR R+ G++PA+IYG +P I+L K+I++ +Y+ +F+TT+ Sbjct: 6 ELKAVARARGGKGAARAERRAGRVPAVIYGEKQEPVTISLGHKEITRIIYAGHFLTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ VIP+DYQLDPV D+ +H DFL+VS+G++VTV VPV F N++K+PG+K GG Sbjct: 66 IDVDGVKHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFENQDKAPGLKSGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V+L CPA IPD + DL L+IGDS+H+ ++LP SS + T+ATIVA Sbjct: 126 LNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVSSAVTGDDTLATIVA 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|302877722|ref|YP_003846286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] gi|302580511|gb|ADL54522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] Length = 202 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +A R G G++R LRK G +P ++YG+ + I ++ ++ +L +++F ++ Sbjct: 2 TTTFNATTRKTQGTGASRRLRKAGSVPGVVYGSG-EAVMIEMNHNELYYKLRAESFHASV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 LT+++ + V + + P + H DF +V + + VP+ FIN++ +P +K Sbjct: 61 LTMNLDGKEEAVQLRAFVNHPFRQQVQHLDFQRVDLSKKIHIKVPLHFINQDIAPAVKTG 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----LNI 179 GGK++ V E + C ++P I VDL +++G S+H+ +++LP + Sbjct: 121 GGKISHVMIEAEISCLPADLPAFIEVDLGGMQLGHSVHLGELKLPRGVELCAHGEHAAEA 180 Query: 180 TIATIVAPIS 189 +AT+ P Sbjct: 181 VVATVHVPRG 190 >gi|312144320|ref|YP_003995766.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] gi|311904971|gb|ADQ15412.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] Length = 226 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 9/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + +R + GKG AR +R++G+IP ++YG DPK I L DI K L F Sbjct: 1 MERHSIEVELRTESGKGVARKIRRDGKIPGVVYGRGKDPKSIKLDPSDIEKLL----FSN 56 Query: 63 TILTL---DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+ L D E VI KD+Q + L+H DF +S +TV VP+ E + Sbjct: 57 AIIDLTVADDDGEESTVIIKDFQKSVIKRELLHVDFQYISMDEKITVSVPLHL--EGTAA 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L + V + IP IT+D++DL++GDS+ D+ LPE ++ + Sbjct: 115 GVHDGGVLQQLLRNVDIDALPAEIPSEITIDISDLEMGDSLSAADLDLPEGIDLVTDSSE 174 Query: 180 TIATIVAPI 188 I T+V P Sbjct: 175 VIVTVVTPT 183 >gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] Length = 212 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 86/183 (46%), Positives = 121/183 (66%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R KVGKG+AR R+ G++PA+IYG+ P I L +I+K +Y+ +F+TT+ Sbjct: 6 ELKATARAKVGKGAARAERRAGRVPAVIYGDGKAPVGITLDHVEINKIIYAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DYQLDPV D +H DFL+V+ G+T+TV VPV F+N+ +P +KQGG Sbjct: 66 VDVDGQKHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLTVDVPVHFLNQETAPALKQGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LN+V H VSL PA IP++I VDL GDSIH+ I+LP + + T+ATI A Sbjct: 126 LNIVSHAVSLNVPAEAIPEAIEVDLTKYGFGDSIHLSAIKLPAGVTWAGHGDDTLATITA 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|197120548|ref|YP_002132499.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. K] gi|226736277|sp|B4ULC3|RL25_ANASK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196170397|gb|ACG71370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. K] Length = 240 Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 2/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+ Sbjct: 3 ENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + HV+ KDY +DPV+ L+HADFL+VS V V VPV + ++ G+ +G Sbjct: 63 LELQVDGASKHVLFKDYTVDPVTRKLLHADFLEVSLDQPVRVEVPVATVG--RAAGVAEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+V HEV + N IP I VD+ +LKIG S+H+ +++ PE Q + + + Sbjct: 121 GILSVATHEVVVEALPNKIPVRIEVDVTELKIGRSLHVSELKPPEGCKFKFQTDYVVVFV 180 Query: 185 VAP 187 P Sbjct: 181 AVP 183 >gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] Length = 208 Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 103/189 (54%), Gaps = 5/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKG+AR +R+ G IP++IYG+ +P+ + +A++ + + S Sbjct: 1 MAN--VTLDATARVETGKGAARKIRQAGNIPSVIYGHGREPQSLTTNARETERLIKSIAV 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +T++ L+I + + ++ Q P ++H DF ++ G TV+V P+ +I G Sbjct: 59 SSTVIELNIDGKTARTLIREIQRHPFKRSILHIDFQELVAGETVSVKCPIVYIG--TPEG 116 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 ++ +GG L+ + HE+ + +IP+ I VD++ +K+G S+H+ D++LP + Sbjct: 117 VRLEGGILDQIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVADLKLPAGIKVLDDATA 176 Query: 180 TIATIVAPI 188 T+ + P Sbjct: 177 TVCVVQPPK 185 >gi|325921463|ref|ZP_08183318.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] gi|325548010|gb|EGD19009.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] Length = 211 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F ++ Sbjct: 3 KTHEIKVERRANEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSS 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 IL L++ ++ V+ +D Q P ++IH DF +VS ++ VP+ F+NE SP K Sbjct: 63 ILDLNLNGDVQQVLLRDMQRHPFKQLIIHIDFQRVSANEKLSAAVPLHFVNEATSPAGKS 122 Query: 124 GG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNI 179 + +EV ++C ++P+ I VDL L++G+ IH+ +I LP Sbjct: 123 SEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEITLPAGVEIPELKLGKEH 182 Query: 180 TIATIVA 186 +A + A Sbjct: 183 DVAVVAA 189 >gi|226946187|ref|YP_002801260.1| 50S ribosomal protein L25/general stress protein Ctc [Azotobacter vinelandii DJ] gi|259646681|sp|C1DEV6|RL25_AZOVD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226721114|gb|ACO80285.1| ribosomal protein L25 [Azotobacter vinelandii DJ] Length = 198 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 109/187 (58%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + L+A +R +GKG++R LR+ Q+PA+IYG +P+ I++ AKDI+K + + + Sbjct: 3 DFALNAEVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSISILAKDITKLIEDEAAFSH 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 ++TL+I V+ K Q P ++HADFL+V ++ VP+ F+N S G+K Sbjct: 63 VITLNIAGATETVLIKALQRHPSKAAVMHADFLRVVADHKLSAVVPLHFVNAETSVGVKQ 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL---NI 179 QGG+++ V EV + C ++P+ I VDL +++G +H+ ++ +P ++ ++ Sbjct: 123 QGGEVSHVISEVEVSCLPKDLPEFIEVDLAQVEVGQIVHLSNLSVPAGVELVALAHGNDL 182 Query: 180 TIATIVA 186 +A I A Sbjct: 183 AVANIHA 189 >gi|261365424|ref|ZP_05978307.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] gi|288566085|gb|EFC87645.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] Length = 190 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNSETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAESSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ +I+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAYLDLDCAKVVAGDILHLSNIQLPEGVESVSLKRNENLA 181 Query: 181 IATIVA 186 +AT+ Sbjct: 182 VATVTG 187 >gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia felis URRWXCal2] gi|75536799|sp|Q4UMK5|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2] Length = 203 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G++R LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAKSRTEFGTGASRALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S ++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFTTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|226939244|ref|YP_002794315.1| Ctc [Laribacter hongkongensis HLHK9] gi|254801052|sp|C1DBA9|RL25_LARHH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226714168|gb|ACO73306.1| Ctc [Laribacter hongkongensis HLHK9] Length = 185 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 1/172 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A R G ++R LR+ G +P ++YG I+ + L + F ++I Sbjct: 2 TIEIQAQQRADQGSSASRRLRRAGVVPGVVYGAGKAAVAISFDHNTLYYALQKEGFHSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L I V +D Q+ + H DF +V + + VP +FIN SP +K Sbjct: 62 LNLVIDGATEQVFVRDVQMHAFKPQVQHIDFQRVDANTVIEAKVPFKFINGEISPAVKMN 121 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G + + + + C N+P +I VDL+ L G+S+H+ I+LPE S Sbjct: 122 GKIIGHLLNAAVVRCLPANLPAAIEVDLSTLVAGESVHLSSIKLPEGVEFAS 173 >gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] Length = 236 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 106/181 (58%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R+ +G G AR R++G +P I+YG P I+++ KD K LY+ + + Sbjct: 3 EIILNVDVRENIGTGGARAARRSGAVPGILYGGDKAPVAISVNEKDFRKNLYTGKLLGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL G E VI KD Q DPVSD +H D ++V T+ + VP+ FINE++ +QG Sbjct: 63 VTLKYGDETQSVIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEVPIHFINEDQCKAFRQG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G L +V H V +L A++IP+ + VDL K+GD++ D+++P + ++ + I + Sbjct: 123 GTLEIVRHSVEILVRADHIPEDLVVDLAGHKLGDTLRWSDVKVPSDVEATITDRDFVIGS 182 Query: 184 I 184 I Sbjct: 183 I 183 >gi|315185672|gb|EFU19440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta thermophila DSM 6578] Length = 209 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 106/183 (57%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ KL+A++R K A+ LR+ G+IPA+IYG D P+AL A++ + + Sbjct: 1 MKKTKLTAIVRTAQKKTEAKALRREGKIPAVIYG-GKDQVPVALDAREFHRTFHGTVAEN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ E G+ Sbjct: 60 VIVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL--EGTPEGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C ++P++I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEAIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTV 177 Query: 182 ATI 184 + Sbjct: 178 VAV 180 >gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sulfurreducens PCA] gi|71153144|sp|Q74FE7|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39982532|gb|AAR33992.1| ribosoma protein L25 [Geobacter sulfurreducens PCA] gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400] Length = 194 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 104/186 (55%), Gaps = 6/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+QK + +R+K GKG AR LR +P ++YG +P + ++AKD++ + + Sbjct: 1 MEQKTMSI--ELREKNGKGVARKLRAQDVVPGVVYGKGIEPVSVKVAAKDLAATIAGEGG 58 Query: 61 MTTILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + +++TL G L VI D Q +P+ ++H DF ++S V VHVP+ + + Sbjct: 59 LNSLITLSGGGSLNGNIVIVADMQRNPLKGDILHVDFHRISLDEKVKVHVPLVMVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+VV + + + C IP++I VD+ +L IG SIH+ ++ LP ++ Sbjct: 117 AGVKEGGMLDVVTYSLDVECLPTAIPEAINVDVTNLAIGHSIHVSELVLPAGIKVLNDPE 176 Query: 179 ITIATI 184 I +I Sbjct: 177 TPIVSI 182 >gi|332527357|ref|ZP_08403413.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] gi|332111766|gb|EGJ11746.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] Length = 214 Score = 200 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G G++R LR ++P I+YG +PK I L + L + F ++IL Sbjct: 1 MKFTAYERSVQGTGASRRLRNAAKVPGIVYGAG-EPKMIELDHNALFFALKKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D+Q+ I++H DF +V E + + VP+ F E SP +K Sbjct: 60 EMELAGKVEKVLLRDFQMHAWKPIVMHVDFQRVDETTRLRKKVPLHFEGEENSPAVKTDK 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 ++ V E+ + C A+ +P+ +T+DL+ L S+H+ D++LP ++ LN I Sbjct: 120 CLVSHVATEIEIECLASQLPEFVTIDLSGLVKNQSLHLNDLKLPAGIKAVRHGTLNPAIV 179 Query: 183 TIVAPIS 189 + P + Sbjct: 180 AVTMPKA 186 >gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] Length = 205 Score = 200 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 1/181 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+ +R+ VG G AR R+ G +P ++YG P I+++ ++ K LY+ + + Sbjct: 3 EIILNVDVRENVGTGGARAARREGAVPGVLYGGDKAPVAISVNEREFRKSLYTGKLIGHL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL GKE VI KD Q DPVSD +H D ++V + + +PV F+N +++P +QG Sbjct: 63 VTLKYGKETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIEIPVAFVNADEAPYTRQG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G L VV H V ++ A+ IP + VDL +IG++I + DI+LPE + ++ + IA Sbjct: 123 GMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQLPEGAAPTITDRDFMIAA 182 Query: 184 I 184 I Sbjct: 183 I 183 >gi|146306088|ref|YP_001186553.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina ymp] gi|166223706|sp|A4XR55|RL25_PSEMY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145574289|gb|ABP83821.1| LSU ribosomal protein L25P [Pseudomonas mendocina ymp] Length = 201 Score = 200 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 114/189 (60%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ Sbjct: 1 MTDFALNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L +++ +V+ K Q P ++HADF +V G +T HVP+ FINE + G+ Sbjct: 61 SHVLAVNVAGATENVVIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEATAVGV 120 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--- 177 K QGG+++ +EV + C ++P+ I VD+ +++G ++HM D++LP+ ++ Sbjct: 121 KQQGGEISHTINEVEVSCLPKDLPEFIEVDMAAVEVGQTVHMSDLKLPKGVELVALAHGN 180 Query: 178 NITIATIVA 186 ++ ++ I A Sbjct: 181 DLAVSNIHA 189 >gi|285017303|ref|YP_003375014.1| 50s ribosomal protein l25 [Xanthomonas albilineans GPE PC73] gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans] Length = 214 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ R+ GKG++R LR++G IPAI+YG P I L ++ + F Sbjct: 1 MAT-THEIKVQRREVEGKGASRRLRRDGVIPAIVYGGDLKPVNIQLDHNEVWLASQNDWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++IL+L + ++ V+ +D Q P +++H DF +V++ + VP+ F++E+ SP Sbjct: 60 YSSILSLSLNGDVQKVLLRDMQRHPYKQLIMHIDFQRVNDNEVLHASVPLHFLHEDVSPA 119 Query: 121 IKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS---SMSQ 176 K + +E+ ++C ++P+ + VDL+ L +GD IH+ D++LP Sbjct: 120 GKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSTLSVGDVIHLSDLKLPAGVELPQLKLG 179 Query: 177 LNITIATIVA 186 +A ++A Sbjct: 180 KEHDVAVVIA 189 >gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter lovleyi SZ] gi|226736326|sp|B3E6G0|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter lovleyi SZ] Length = 194 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q + K+ R GKG +R LR G+IP I+YG +P I+L K ++ + + Sbjct: 1 MQQTQMKI--ETRSSTGKGISRKLRAAGRIPGIVYGRGMEPVAISLEPKALNAAIAGEGG 58 Query: 61 MTTILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++TL+ G + V VI + Q D + H D +V+ V V+VPV + + Sbjct: 59 LNNLITLEGGGDLDKVVVIVAEIQRDALKRTPEHVDLHRVNMSEKVRVNVPVSLVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+ H + + C IP+ I +++ DLKIG +IH+ +I P + Sbjct: 117 AGVKEGGLLDFAHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFPAGVKCIDNPK 176 Query: 179 ITIATIVA 186 + ++ Sbjct: 177 TPVVGVLG 184 >gi|308171943|ref|YP_003918648.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|307604807|emb|CBI41178.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|328551753|gb|AEB22245.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens TA208] gi|328910013|gb|AEB61609.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens LL3] Length = 202 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + R +R +G +P IIYG + P++L + ++ K L + TI+T Sbjct: 3 TLKANERTDFKRSTLRKIRHSGHVPGIIYGKETTNTPVSLDSVELLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+ + Q DP+ + L HADF V+ + VP++ E + G+K GG Sbjct: 62 IDVNGNQQSVMVTELQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGE--AKGVKDGGI 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 120 IQQPLHELSIKAKPKDIPQTIDVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASILP 179 Query: 187 PI 188 P Sbjct: 180 PK 181 >gi|148260671|ref|YP_001234798.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidiphilium cryptum JF-5] gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] gi|166223656|sp|A5FZ47|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5] gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] Length = 217 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + E ++A R + GKG AR R+ G++PA+IYG +P IAL + + + + + Sbjct: 1 MAKFE-TIAAEDRARAGKGVARATRRAGKVPAVIYGAKQEPTLIALDPRIVLREMKRGGW 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + ++ + +D QL PV+D H DF +++ G V V V V F+NE S G Sbjct: 60 RSRLYEIETASGKARALMRDIQLHPVTDQPEHVDFQRLAAGEPVRVAVNVNFLNELISVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LNVV H V +LC ++IPD DL L I D+I D++ + ++ + Sbjct: 120 MKRGGVLNVVRHAVEVLCDPDHIPDHFEADLGPLDINDNIRWSDLKGTGEAKPTITDRDF 179 Query: 180 TIATIVAPI 188 IATI P Sbjct: 180 VIATIAPPT 188 >gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] gi|166223714|sp|A8EY64|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] Length = 204 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-KILELEAQSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEE-KKQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S++ I LP+ S S+ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKIVLPKGCSFASKKEFV 178 Query: 181 IATIVAPIS 189 +ATI+ Sbjct: 179 LATIIGRRG 187 >gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii RML369-C] gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] gi|109893391|sp|Q1RI71|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223713|sp|A8GVL5|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C] gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] Length = 202 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++ G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAKSRNEFGTGAARALRREGRVPAIIYGAKKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIEGTQYKVLPKAVELHPVTDIVRHVDFVFL-EDKTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ ++LPE S ++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKVKLPEGCSFTTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia prowazekii str. Madrid E] gi|6225985|sp|Q9ZCV3|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii] gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii Rp22] Length = 203 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 5 LELEAKSRTEFGTGAARALRREGRVPAIIYGAGKTPISISLKEKEITKYYRKPAFISQLI 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L I K+ V+PK +L PV+DI+ H DF+ + T + VP+ + + ++ G+K+GG Sbjct: 65 NLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPIVYEGKERALGVKRGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N++ V LLC NNIP ++T+D+ ++ IG S+ + LP+ S +++ +ATI+ Sbjct: 124 YFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGCSFITKKEFVLATII 183 Query: 186 APIS 189 Sbjct: 184 GRRG 187 >gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] Length = 208 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 2/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + A +R+ G+ + R LR+ G+IPAIIYG +A+ ISK L + F T Sbjct: 1 MSDFIVEAELRETNGRSATRRLRRTGKIPAIIYGGDKPDLSVAVDYFVISKLLNQEEFHT 60 Query: 63 TILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++L + + V+ K Q DP+ D + H DF++VS +T+ VPV INE+K PG Sbjct: 61 SMLEVKVKGSRGKNTVMLKATQWDPIKDTVTHLDFIRVSSSDMITLDVPVVAINEDKCPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +GG ++V+ H + + A++IP I +D + L IGDS+H+ED+ LPE ++N T Sbjct: 121 VAKGGLIDVIRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIEDVTLPEGAVVHHEVNFT 180 Query: 181 IATIVA 186 + + A Sbjct: 181 VLNVAA 186 >gi|154684571|ref|YP_001419732.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens FZB42] gi|166223662|sp|A7Z0H5|RL25_BACA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154350422|gb|ABS72501.1| Ctc [Bacillus amyloliquefaciens FZB42] Length = 202 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + R +R +G +P IIYG P++L + ++ K L + TI+T Sbjct: 3 TLKANERTDFKRSTLRKIRHSGHVPGIIYGKEITNTPVSLDSVELLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+ D Q DP+ + L HADF V+ + VP++ E + G+K GG Sbjct: 62 IDVNGNQQSVMVTDLQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGE--AKGVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 120 IQQPLHELSIKAKPKDIPQTINVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASILP 179 Query: 187 PI 188 P Sbjct: 180 PK 181 >gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] Length = 214 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 2/187 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A R++ GKG+AR RK+G++PA+IYG + ++L +D+ K ++ + + Sbjct: 3 QTIRIEAEARERAGKGAARATRKDGRVPAVIYGAKQEAVLLSLDPRDVMKEMHKGGWQSH 62 Query: 64 ILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + E V + ++ Q PV D +H DF +++ G + V VPV F NE +PGIK Sbjct: 63 LYEVAVAGAEPVRCLMREVQFHPVKDSPLHVDFQRLAPGQMIRVKVPVVFQNEESAPGIK 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITI 181 +GG LNVV E+ +L + +P+ +DL IGDS+ ++ + T + + + Sbjct: 123 EGGVLNVVRRELEVLSDPDQVPEQFEIDLGAAVIGDSLRWSNVIDHKGTKPVIVGRDFVV 182 Query: 182 ATIVAPI 188 ATI P Sbjct: 183 ATIAPPT 189 >gi|284046684|ref|YP_003397024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] gi|283950905|gb|ADB53649.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] Length = 218 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L+ R+ G + R LR++G +P I+YG +DP P + A+++ L Sbjct: 1 MAAEETTLTVAPREIEGSRATRRLRRSGLVPGIVYGGDADPLPFQVDARELRNALAHGG- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + V+ KD+ PV+ ++H D L+V + V V IN + +PG Sbjct: 60 --AVIQLTLDGAQTPVVLKDHHRHPVNGNMLHVDLLRVDLTQRIHATVVVEVINADDAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG L V E+++ N IPD+I +D++ +++GD++++ + P + + L T Sbjct: 118 IKGGGVLEQVTREINIEALPNEIPDTIELDVSSVEVGDTVYLSALTPPSGVALLDDLEET 177 Query: 181 I-ATIVAPI 188 + +++AP Sbjct: 178 VLVSVLAPK 186 >gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] Length = 204 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A +R++ GKG+AR R+ G +PA+IYG+ + I L K+ + L+ F Sbjct: 1 MAN-SYELKAQVRERAGKGAARAARREGLVPAVIYGDKKEAVSINLPLKEATMTLHKGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ + T+D+ E VI KD+QL PV D L+H DFL+VS +T+TV +PV+F+NE SPG Sbjct: 60 LSHVGTIDLNGEKTSVIAKDFQLHPVKDTLMHVDFLRVSADATLTVEIPVKFLNEETSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LNVV H V + PA IP++I VDL + +G S H+ ++LP + ++ + Sbjct: 120 LKRGGVLNVVRHTVEMTVPATAIPEAIEVDLAEADLGSSQHISAVKLPAGCAPTITDRDF 179 Query: 180 TIATIVAPIS 189 TI+TI AP Sbjct: 180 TISTIAAPAG 189 >gi|330813694|ref|YP_004357933.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] Length = 237 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 1/189 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ L A +R+ K + LR +G +P ++YG++ +A+ + K L NF Sbjct: 1 MENNLTSLEANIRETKTKSDIKKLRIDGFVPGVLYGDVETNFKLAVKKNALEKLLKIGNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 M+T++ + + + V+P+D + + +++ IH DF ++S G+ V V +PV+FINE+ PG Sbjct: 61 MSTVIDIKVAGKEYKVLPRDIEFNKLTNQPIHVDFQKISAGTKVVVWIPVKFINESICPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K GG LN+V +V L CPA+ IP + DL + ++ +SIH+ I+LPE + + Sbjct: 121 LKMGGVLNIVRRKVELNCPADQIPAELVCDLGEKQLNESIHISSIKLPENVKPTILDRDF 180 Query: 180 TIATIVAPI 188 TIAT+ AP Sbjct: 181 TIATVAAPT 189 >gi|307718726|ref|YP_003874258.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] gi|306532451|gb|ADN01985.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] Length = 209 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 104/183 (56%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ KL+A++R K A+ LR+ G+IP ++YG D P+AL A++ + + Sbjct: 1 MKKTKLTAIVRTAQKKTEAKALRREGKIPGVVYG-GKDQVPVALDAREFHRTFHGTVAEN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ E G+ Sbjct: 60 VIVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL--EGTPEGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C ++P+ I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEVIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTV 177 Query: 182 ATI 184 + Sbjct: 178 VAV 180 >gi|312194510|ref|YP_004014571.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] gi|311225846|gb|ADP78701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] Length = 209 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 5/180 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG AR R+ G++PA++YG+ P+ IALS +++ + Sbjct: 1 MSEVRIVAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALSQRELLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LT+D+G +PKD Q P+ H D + V G VTV VPV E I Sbjct: 61 VLLTVDLGDGTELALPKDVQRHPIKGSFEHVDLVIVRRGEKVTVDVPVNITGELHPDAI- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L+ VS+ PA IPDS+TVD+ + G + LP+ IA Sbjct: 120 ----LDQPNTTVSVSAPATAIPDSLTVDITGMGPGSHYTAGQLELPDGVELEGDPETIIA 175 >gi|218781214|ref|YP_002432532.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfatibacillum alkenivorans AK-01] gi|226736306|sp|B8FLB8|RL25_DESAA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218762598|gb|ACL05064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfatibacillum alkenivorans AK-01] Length = 218 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 4/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L A R G G AR LR+ G IPA++YG S+P +++S KD+S L Sbjct: 1 MKTHELKASPRTTRGNGPARALRREGFIPAVLYGPDSEPITLSVSHKDLSDILQGVGSSQ 60 Query: 63 TILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+I + K+ Q + VS +HADF ++S + V VPV E KS G Sbjct: 61 VMFNLNIEGADAPRKAMIKELQTNVVSQRYLHADFYEISMDRKLHVMVPVVV--EGKSKG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V+ E+ ++C +IP+ +D+ +L IG+++H+ D+ + + T Sbjct: 119 MEEGGLLQVIRRELEVICLPGDIPEEFVIDVTELGIGEAVHLSDVPKGDAVEFPESADFT 178 Query: 181 IATIVAPISGS 191 + T+VAP + + Sbjct: 179 VVTVVAPTAAA 189 >gi|269125253|ref|YP_003298623.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] gi|268310211|gb|ACY96585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] Length = 200 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG+AR R+ G++PA++YG+ + P+ I L D+ L + N + Sbjct: 1 MSEVRIAAEPRTEFGKGAARRTRRAGKVPAVLYGHGTPPQHITLPGHDLMLALKTPNVLL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G+E +PKD Q DP+ L H D L V G VTV VPV + + Sbjct: 61 RLEGLPGGEE--LALPKDVQRDPIKGFLEHVDLLLVKRGEKVTVEVPVVATGD-----VV 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L +V++ A +IP+++ VD++ L++GDS+ +D++LP + + I Sbjct: 114 AGGRLEQPVIQVAVEAEATHIPETVEVDVSGLQVGDSVLAKDLKLPSGVALAADEETLIL 173 Query: 183 TIV 185 I Sbjct: 174 QIA 176 >gi|88800290|ref|ZP_01115857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] gi|88777005|gb|EAR08213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] Length = 208 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 106/187 (56%), Gaps = 9/187 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD--PKPIALSAKDISKRLYSKNFMTT 63 +L+AV+R++ GKG++R LR+ ++PA+IYG + P+ + L +++ K + ++ F + Sbjct: 5 YELNAVLREEHGKGASRRLRREKKVPAVIYGGAKNRKPQSLTLELRELVKAMENEAFFSH 64 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +LT++IG + I D Q P +D +H D +V++ + V VP+ F+ E K K Sbjct: 65 VLTINIGDKSEQAILMDVQRHPATDFPMHIDLERVTKSTVVHKKVPIHFVGEEKVE--KS 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLN 178 G K +E+ + C ++P+ I VD+ L++G +H+ +++LP+ S + + Sbjct: 123 GAKALHAANELEITCKVGDLPEFIEVDVAALEVGAVLHLSELKLPKGVSLVELNKGEDHD 182 Query: 179 ITIATIV 185 + +IV Sbjct: 183 SPVVSIV 189 >gi|118579182|ref|YP_900432.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter propionicus DSM 2379] gi|166223702|sp|A1AM04|RL25_PELPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118501892|gb|ABK98374.1| LSU ribosomal protein L25P [Pelobacter propionicus DSM 2379] Length = 199 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M QK+ + +R K GKG +R LR +P ++YG DP ++++ +++ + + Sbjct: 1 MQQKQMNI--ELRSKTGKGISRKLRSADMVPGVVYGKGMDPMAVSINYRELQAAMAGEGG 58 Query: 61 MTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++TL G + I D Q D V H D +V+ + V VPV + Sbjct: 59 QNNLITLVGGGSLDQSMAIVADLQRDAVKGTYKHVDLHRVNMSEKLRVTVPVVLKG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+ HE+ + C NIPD I +D+ L + SIH+ +I LPE + Sbjct: 117 IGVKEGGLLDFAHHELHVECLPGNIPDHIEIDVTSLAVAHSIHVGEIALPEGVKVLDNPK 176 Query: 179 ITIATIVA 186 + +++ Sbjct: 177 TPVVSVLG 184 >gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 210 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L+A R++ + S R +R+ G IP ++YG + I++ AK++ K L S N T+ Sbjct: 3 EAMLNANPREERTRSSLRQIREQGGIPGVLYGKQTGSMAISVDAKELKKILGSVNGRNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +++ VI K Q+D + + H DF +VSE + + VPV + G+ G Sbjct: 63 INMNVNGAKRTVIVKSLQMDHLHRGIQHVDFQEVSENTKIRTVVPVHLVG--TPIGVTHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + V + C + IP+ I VD+++L+IGD++ + D+ LP + + T+ + Sbjct: 121 GIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVLDHPHTTVVGV 180 Query: 185 V 185 Sbjct: 181 A 181 >gi|167036980|ref|YP_001664558.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039691|ref|YP_001662676.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter sp. X514] gi|256750623|ref|ZP_05491509.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300915060|ref|ZP_07132375.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307724983|ref|YP_003904734.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|320115398|ref|YP_004185557.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226736371|sp|B0K775|RL25_THEP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736372|sp|B0K664|RL25_THEPX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166853931|gb|ABY92340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X514] gi|166855814|gb|ABY94222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750463|gb|EEU63481.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300888784|gb|EFK83931.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307582044|gb|ADN55443.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|319928489|gb|ADV79174.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 201 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG ++ P+A+ + + L K+ Sbjct: 1 MQSVSIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNKLQRLLQ-KHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGTGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 117 SRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|261417545|ref|YP_003251227.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. Y412MC61] gi|297528420|ref|YP_003669695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|319765202|ref|YP_004130703.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] gi|261374002|gb|ACX76745.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC61] gi|297251672|gb|ADI25118.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|317110068|gb|ADU92560.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] Length = 210 Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +R G IPAI+YG + K I +SA ++ K L + T++L Sbjct: 3 IVLEAKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVSAAELEKVLR-EGGRTSLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL +G E V+ ++ Q DP+ L+HADF V + V + V VR + E +PG+K GG Sbjct: 62 TLKVGGEDYSVLLREMQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVGE--APGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|329119316|ref|ZP_08248003.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] gi|327464663|gb|EGF10961.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] Length = 211 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A +R+ G G++R LR+ GQ+PA++YG+ + IA+ K + L F T++ Sbjct: 23 SYELQATLREAQGTGASRRLRRAGQVPAVLYGDNQEAVAIAVDHKTVFYALEKSAFHTSL 82 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P ++H DF V + + +PV +N KS +K Q Sbjct: 83 IKLTLDGKTQDVIVRDFQIHPFRQQVVHLDFQAVDLNKPLRLRLPVAVVNAEKSKAVKLQ 142 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G+++++ V +L NIP ++ +D ++ GD +H+ DI+ PE SS++ N+ Sbjct: 143 SGRVSLLATTVEVLVDPKNIPSALELDCAEVVAGDILHLSDIKYPEGVSSVALKRGSNLA 202 Query: 181 IATIVA 186 +AT+ Sbjct: 203 VATVTG 208 >gi|117929152|ref|YP_873703.1| 50S ribosomal protein L25/general stress protein Ctc [Acidothermus cellulolyticus 11B] gi|117649615|gb|ABK53717.1| LSU ribosomal protein L25P [Acidothermus cellulolyticus 11B] Length = 203 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG+AR +R+ G++PA++YG+ + P+ I+L ++ L + N + Sbjct: 1 MSEVRIKAEPRTEFGKGAARRVRRAGKVPAVLYGHGTPPRHISLPGHELMLALKTPNVLL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + +PK Q + V+ L H D L V G V V VP+RF+ + Sbjct: 61 RLEGLEGPDDGELALPKAVQRNVVTGFLEHVDLLLVRRGEQVEVDVPLRFVGTHAP---- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + A IP+ I V L+ L+IG SI++ D+RLP+ ++ ++ + + Sbjct: 117 -GGVLEEHLVALPVRADATRIPEEIEVSLDGLEIGGSIYVRDVRLPDGVTAAAEPDEVVV 175 Query: 183 TIVAPISGS 191 ++ ++ S Sbjct: 176 HLLPALTAS 184 >gi|311070699|ref|YP_003975622.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] gi|310871216|gb|ADP34691.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] Length = 205 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + S R +R +G +P IIYG + P++L + ++ K L + TI+T Sbjct: 3 TLKAKERTDFKRSSLRKIRTSGHVPGIIYGKETTNTPVSLDSIELIKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +DI + V+ + Q DP+ + + HADF V+ + V VP+ E S G+K+GG Sbjct: 62 IDIDGKKHAVMVSELQTDPLKNEVTHADFQVVNMSEDIEVDVPIHLTGE--SVGVKEGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +E+S+ IP SI D++ L I D + + D+ + S + + +A+I+ Sbjct: 120 LQQPLYELSVKAKPKAIPQSIEADISGLDINDVLTIADLSADGEYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|121603807|ref|YP_981136.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas naphthalenivorans CJ2] gi|166223703|sp|A1VKN7|RL25_POLNA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120592776|gb|ABM36215.1| LSU ribosomal protein L25P [Polaromonas naphthalenivorans CJ2] Length = 218 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 1/169 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG ++P I + + + + F +IL Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTAEPILIEIDHNALWHAIKKEAFHGSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++G V+ +D Q+ P + H DF +V + +TV VPV F E +SP +K + Sbjct: 61 EMELGGTEHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVHFSGEEESPAVKTEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 + V E+++ C +IPD I VDL L G S+H++DI LP++ + Sbjct: 121 CLVTHVLTEMTVSCFPADIPDFIAVDLGGLTKGKSLHVKDIVLPKRVKA 169 >gi|163739061|ref|ZP_02146474.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] gi|163741697|ref|ZP_02149087.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161384870|gb|EDQ09249.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161387866|gb|EDQ12222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] Length = 209 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R+ G +P +++G +DP I + ++ K+L + F Sbjct: 1 MAGQIPDLVCQERTGSGKGAARAARRAGMVPGVVFGGDADPVSIQIPFNELLKKLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H D +++ S V + VPV FINE ++P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEEEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L+ A +IP+ + VDL L +GD++ + I+LPE + Sbjct: 121 GIKRGGVLTAVRPEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANISAPSG 190 >gi|119715156|ref|YP_922121.1| 50S ribosomal protein L25P [Nocardioides sp. JS614] gi|119535817|gb|ABL80434.1| LSU ribosomal protein L25P [Nocardioides sp. JS614] Length = 223 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K + A R + GKG+AR +R+ ++PA++YG+ +DP + L + L Sbjct: 1 MSEK---IKAEARTEFGKGAARRIRRADKVPAVVYGHGNDPVHLTLPGHETMMALKH-GG 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + + K Q+DP+ L H DF+ V G VTV VPV + + Sbjct: 57 ANALLELDIDGKSQLALTKQVQIDPIKRHLEHIDFVAVKRGEKVTVEVPVHLVGDAARET 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + L A +IP+ I V + + G IH D+ +P ++ + Sbjct: 117 L-----VVTETATIQLEAEATHIPEHIEVSIEGAEAGTQIHASDLTIPSGSTLLLDPETL 171 Query: 181 IATIV 185 I + Sbjct: 172 IVNVT 176 >gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia typhi str. Wilmington] gi|71153659|sp|Q68WD3|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington] Length = 203 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 111/186 (59%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAKSRTEFGTGAARALRREGRVPAIIYGAGKIPISISLEEKEITKYYRRPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N++ V LLC NNIP ++T+D+ ++ IG S+ +++LP S +++ Sbjct: 119 VKRGGYFNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEVKLPIGCSFVTKKEFV 178 Query: 181 IATIVA 186 +ATI+ Sbjct: 179 LATIIG 184 >gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] Length = 229 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 115/184 (62%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TTI Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEEKELRLRILAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D +H DFL++ G+T+ + VP+ +PG+K+GG Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPLHVDFLRLGAGATIRISVPLHLKGLEVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA+NIP I D+++L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPADNIPQFIEADVSNLDIGVSLHLSDIALPTGVKSVSREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|238020516|ref|ZP_04600942.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] gi|237867496|gb|EEP68502.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] Length = 190 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LRK G +PA++YG + + IA+ K + L ++F T + Sbjct: 2 SIQIQATVRETQGTGASRRLRKEGLVPAVVYGVG-EAQAIAVDHKQMFYALEKESFFTQL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L L+I + VI +DYQ+ PV + H DF V+ + + +PV +N KS +K Q Sbjct: 61 LKLNINGKEQDVIVRDYQMHPVKRQVQHIDFQAVNVNEPLRMRIPVHVVNAEKSKAVKLQ 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G++ ++ V ++ NIP +I +D +++ GD +H+ D+ PE S++ N+ Sbjct: 121 SGRVALLTTVVDVIVDPKNIPAAIELDCENVEAGDILHLSDLSFPEGVQSVALKRGSNLA 180 Query: 181 IATIVAPISG 190 IA + Sbjct: 181 IANVSGKKGA 190 >gi|294629795|ref|ZP_06708355.1| 50S ribosomal protein L25 [Streptomyces sp. e14] gi|292833128|gb|EFF91477.1| 50S ribosomal protein L25 [Streptomyces sp. e14] Length = 198 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N Sbjct: 1 MSEVKISAATRSEFGKGAARRIRRDNKVPGVLYGHGTDPLHLTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++LDI + IPK Q DP+ L H D L V G V V +PV E +PG Sbjct: 58 VLISLDIDGKSNELAIPKSVQRDPLKGFLEHVDLLLVKRGEKVNVEIPVVAEGE-LAPG- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V + + A +IP+ +TV + L+ G SIH +DI LP S + + Sbjct: 116 --GNLLEHVLSSLPVEAEATHIPEQVTVSVEGLEAGASIHAKDITLPSGVSLAVDEDAVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium cellulosum 'So ce 56'] gi|189042374|sp|A9GXJ8|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum 'So ce 56'] Length = 229 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 3/187 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+A R+ GK ++ LR+ GQIPAI YG P+ +A+S K + + L S + +++ Sbjct: 4 IKLNATRREDSGKSASSRLRRAGQIPAIAYGRELAPQSVAISPKALLQVLGSDHGKNSVV 63 Query: 66 TLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L I + + V+ +DY P+S L+HADF+QV V V +P R + K G+ G Sbjct: 64 ELAIENGQTLTVMVRDYDYHPISRELVHADFIQVKLDQPVDVQIPFRCVG--KPKGVVTG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + + C IP I +D+ +L +GDS ++LPE ++ + TIA + Sbjct: 122 GVLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKASGLKLPEGVKTLLADDQTIAVV 181 Query: 185 VAPISGS 191 AP Sbjct: 182 NAPEKAG 188 >gi|326389777|ref|ZP_08211342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] gi|325994259|gb|EGD52686.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] Length = 202 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG ++ P+A+ + + L K+ Sbjct: 1 MQAISIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNALQRLLQ-KHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGIGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 117 SRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|145593348|ref|YP_001157645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora tropica CNB-440] gi|145302685|gb|ABP53267.1| LSU ribosomal protein L25P [Salinispora tropica CNB-440] Length = 233 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRR-GGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +DI V +PK Q DP+ D H D L V G VTV VPV+ + E Sbjct: 60 QLFAIDISDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAA---- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G + +S+ A N+PD + + L+ G + D++LP + + + Sbjct: 116 -KGTLIVHDHDSLSVTADATNVPDHLDASIEGLEAGSQVAAADVQLPAGVELATDPELPV 174 Query: 182 ATIVA 186 A + A Sbjct: 175 AAVTA 179 >gi|111225611|ref|YP_716405.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia alni ACN14a] gi|111153143|emb|CAJ64890.1| 50S ribosomal protein L25 [Frankia alni ACN14a] Length = 219 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 5/185 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 12 AMSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGT 71 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTL++ + KD Q P+ H D + V+ G V +PV+ + E + Sbjct: 72 NVLLTLELADGTELALAKDVQRHPIKGSFEHIDLVLVNRGEKVVADIPVQVVGEPHPDTL 131 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++ ++L A+ +P++I VD+ L+ G ++ + LPE + ++ + Sbjct: 132 -----VDQQVTSIALRADASRLPNAIEVDITGLEPGTAVLARQLALPEGAELDADPDLAV 186 Query: 182 ATIVA 186 +A Sbjct: 187 VQCLA 191 >gi|171060169|ref|YP_001792518.1| 50S ribosomal protein L25/general stress protein Ctc [Leptothrix cholodnii SP-6] gi|226736334|sp|B1Y3Q0|RL25_LEPCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170777614|gb|ACB35753.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Leptothrix cholodnii SP-6] Length = 208 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R+ G G++R LR G++P I+YG P I L + L + F ++IL Sbjct: 1 MKFVAFARELQGTGASRRLRHGGKVPGIVYGGSGKPTSIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 +++ + V+ + Q+ +++H DF +V E + + VP+ F+NE +S +K Sbjct: 61 EMELAGQSEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLHFVNEAESQAVKLDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 +N V E+ + C A +P+ +TVDL L G S+H++D++L ++ N +A Sbjct: 121 CLINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEASIKVVTHGRKNPVVA 180 Query: 183 TIVA 186 T+V Sbjct: 181 TVVP 184 >gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] gi|166223712|sp|A8GP85|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] Length = 199 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 1/183 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + G G+AR LR+ G++PAIIYG P I+L K I+K F++ ++ + Sbjct: 7 LEAKPRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKAITKYYRKPAFISQLINV 66 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I ++ V+PK +L PV+D++ H DF+ + T + VP+ + + ++ G+K+GG Sbjct: 67 TIDQKQYKVLPKAVELHPVTDMVRHVDFVFLEA-KTQKMEVPIVYEGKERALGVKRGGYF 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ +ATI+ Sbjct: 126 NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFVLATIIGR 185 Query: 188 ISG 190 Sbjct: 186 RGA 188 >gi|153003001|ref|YP_001377326.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. Fw109-5] gi|166223660|sp|A7H6J6|RL25_ANADF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|152026574|gb|ABS24342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. Fw109-5] Length = 235 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R++ GKG AR LR+ G IPA++YG +P +++ + K + + + T+LTL Sbjct: 6 INAQRREEKGKGPARRLRQKGLIPAVVYGRKQEPTHLSVDPASLLKAIETPHKFNTLLTL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + HV+ KD+ +DPVS L HADFL+V V V VPV + +S G +GG L Sbjct: 66 KLDGAEKHVLFKDWAVDPVSRKLEHADFLEVKLDEAVKVAVPV--VTSGRSVGQAEGGIL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 ++ HEV L + IP I VD+ +LKIG SIH+ + PE + IA + P Sbjct: 124 SLATHEVVLEALPSKIPVRIEVDVTNLKIGQSIHVSQLTPPEGCKLKYSSDYVIAFVAVP 183 >gi|289578962|ref|YP_003477589.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] gi|289528675|gb|ADD03027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] Length = 202 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+K G IP I+YG ++ P+A+ + L ++ Sbjct: 1 MQSVSIEAIKRD-TGKNAARRLKKQGYIPGILYGKDMTENIPLAVEYNKFQRLLQ-QHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKFEGIGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 117 SKGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|297562917|ref|YP_003681891.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847365|gb|ADH69385.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 205 Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG++R R+ G++PA++YG+ ++P+ + L ++ L + N Sbjct: 1 MSEVRIAAEPRTEFGKGASRRARRAGKVPAVLYGHGTEPRHLNLPGHELMLALKTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD + +PK Q D + L H D L VS+G V V +PV I E K+PG+ Sbjct: 58 VLIRLDGLDKDNLALPKSVQRDAIKGFLEHIDLLVVSKGEKVEVEIPVNLIGEVKAPGV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V++ A +IP+ + + DL+IG + D++LP + + + Sbjct: 117 ----LTQELVTVAVEAEATHIPEGVEFVVEDLEIGATPTAADVKLPSGVTLATDPEAILL 172 Query: 183 TIVAPI 188 T+ AP Sbjct: 173 TVSAPR 178 >gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] Length = 189 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 1/166 (0%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR +G+IPA+IYG D I+LS ++ + S T ++ L+I + +V+ +D Sbjct: 1 SRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLIELEIDNKKEYVLMRD 60 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q PV+D + H DF + G+ + + VP+ F NE K GIK+GG LN++ +S+ C Sbjct: 61 VQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSP 120 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIV 185 I +I +DL+ L G SIH+ D++LP + + M + N I TI Sbjct: 121 KAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTIS 166 >gi|297193932|ref|ZP_06911330.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] gi|197720295|gb|EDY64203.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] Length = 198 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N Sbjct: 1 MSEVKLTAERRSEFGKGAARRIRRDNKVPGVLYGHGTDPVHVTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++LD+G IPK Q DP+ L H D L V G V+V +PV + +PG Sbjct: 58 VLISLDLGGTSELAIPKAVQRDPLKGFLEHVDLLLVKRGEKVSVDIPVHTEG-DLAPGA- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + V + + + A +IP+S+TV + L GDS+ +DI LP+ T+ + + + Sbjct: 116 --FLVEHVLNALPVEAEATHIPESVTVSIEGLSAGDSVLAKDITLPKGTTLTVEDDTVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] Length = 232 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 112/182 (61%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R+ KG LR NG +PAIIYG + + I++S K + + +NF++ I+TL Sbjct: 4 LNANIRNTKTKGELSALRNNGNVPAIIYGGEAQNEKISISKKLLKSLIEKENFLSNIVTL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+PK+ + +SD IH DFL+V G + + VPV+FIN KSPG+K+GG L Sbjct: 64 NVDGKSQNVLPKEIKYHIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVA 186 N+V +V L CP+ IP+S+ +DL+ + IG+S + I+L + + IAT+ A Sbjct: 124 NIVRRKVELRCPSEKIPESLVIDLDGIDIGESFKISSIKLETDVEPTIRGRDFVIATLAA 183 Query: 187 PI 188 P Sbjct: 184 PT 185 >gi|108803738|ref|YP_643675.1| 50S ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] gi|108764981|gb|ABG03863.1| LSU ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] Length = 226 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 4/186 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMT 62 + L A +R GKG AR LR +G IPA++YGN S +A+ AK + L Sbjct: 3 ENVALEARIRQGRGKGEARRLRASGMIPAVLYGNGSAQSTALAVPAKVVDYTLQH-YGDN 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++ D Q DP++ L+H DF V + V VP+ E G+K Sbjct: 62 ALYDLELDGGKKTARVVDVQRDPLTGRLLHVDFAPVDMTERIEVAVPLALAGE--PAGVK 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V +EV + +IP I VD++ L + +++ + D+RLPE +S +A Sbjct: 120 EGGVLQQVAYEVRVEALPGDIPQEIEVDVSGLGMQENLTLGDVRLPEGLRLVSDPEEVVA 179 Query: 183 TIVAPI 188 T+ P Sbjct: 180 TVTPPT 185 >gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] Length = 242 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 117/183 (63%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+TT+ Sbjct: 6 ELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQNIFAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DY LDPV D +H DFL++ +G+T+ V VP+ SPG+K+GG Sbjct: 66 IDLDGQKHRVIPRDYSLDPVKDFPLHVDFLRLGKGATIRVSVPLHVKGAEVSPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L IP I VD++ L+I +S+H+ D++LP+ +S+ ++T+ T+V Sbjct: 126 VNMVNHTVELEADVEQIPQFIEVDVSKLEINNSLHLSDVQLPKGVKPVSRDDVTLVTVVP 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|29830106|ref|NP_824740.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces avermitilis MA-4680] gi|71153666|sp|Q82HE6|RL25_STRAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29607216|dbj|BAC71275.1| putative ribosomal protein L25 [Streptomyces avermitilis MA-4680] Length = 197 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R+ ++PA++YG+ ++P I L ++ L + N Sbjct: 1 MSEVKLAAEPRTEFGKGAARRIRRESKVPAVVYGHGAEPVHITLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI + IPK Q D + L H D L V G V V V V + +PG Sbjct: 58 VLLSLDIEGKAQLAIPKAVQRDAIKGFLEHVDLLLVRSGEKVNVEVYVHTEG-DLAPGA- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V +++ A +IP+S+TV + L+ G SI +DI LP T+ + + Sbjct: 116 --YLLEHVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPSGTTLAIDEDAVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|152997607|ref|YP_001342442.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] gi|254801053|sp|A6W1C8|RL25_MARMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150838531|gb|ABR72507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] Length = 192 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R + GKG++R LR G +PA+IYG + P I+ ++ K + + F+T + Sbjct: 2 SLSINAVARTQEGKGASRRLRNEGLVPAVIYGGETAPVSISFKDNELLKAVGTPGFLTGL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQ 123 + + + + V+ K Q P + ++H D + +T VP+ FIN +S G+ KQ Sbjct: 62 VEVTVEGKTEQVLVKALQRHPSTGAVMHMDLQRAQADKAITTRVPLSFINAAQSEGVSKQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG+L V + C N+P+ +TVD+ ++ H+ D+ LPE +S + Sbjct: 122 GGRLTVESKLAEVRCLPANLPEVLTVDVIKGQLDQIFHLSDVILPEGVELVSLLKGEDHD 181 Query: 179 ITIATI 184 IA I Sbjct: 182 QPIARI 187 >gi|56418580|ref|YP_145898.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus kaustophilus HTA426] gi|68053036|sp|Q5L3U8|RL25_GEOKA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56378422|dbj|BAD74330.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426] Length = 210 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + +R G IPAI+YG + K I +S ++ K L + T++L Sbjct: 3 IVLEAKERADKKRSTLHRIRSQGGIPAILYGKKVENKMIFVSTAELEKALR-EGGRTSLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL +G E V+ ++ Q DP+ L+HADF V + V + V VR + E +PG+K GG Sbjct: 62 TLKVGGEEHSVLLRELQRDPLRGHLLHADFQAVDMSTEVDIDVEVRLVGE--APGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVKTDGKFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|254464271|ref|ZP_05077682.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] gi|206685179|gb|EDZ45661.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] Length = 207 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L R GKG+AR R+ G +P ++YG ++P I + ++ K+L + F Sbjct: 1 MAKEIPDLVVQERAGTGKGAARAARRAGMVPGVVYGGDAEPLAIQVPFNELLKKLKAGQF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ S + +++ V FINE+K+P Sbjct: 61 KSTLWNLKVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLYIHVEFINEDKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L A +IP+ I VDL L IGD I + + LP + + Sbjct: 121 GIKKGGMLTVVRPEVELNVTAGDIPEKIVVDLEGLNIGDVITISSVDLPAGAKPVIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPAG 190 >gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] Length = 209 Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G +P ++YG +P+ I + ++ K+L + F Sbjct: 1 MAKEIPDLVAQARAGTGKGAARAARRAGMVPGVVYGGDVEPQAIQIPFNELLKKLKAGQF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H D +++ S + + +PV F+NE+ P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPVEFLNEDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+ A +IP+ I VDL D IGD I + I LP + + Sbjct: 121 GIKKGGMLTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDLPGGSKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANIAAPGG 190 >gi|196250765|ref|ZP_03149452.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] gi|196209715|gb|EDY04487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] Length = 210 Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IPA++YG D K I++SA D+ K L + +++ Sbjct: 3 IVLGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ ++ Q DP+ L+HADF V + V V V VR + E +PG+K GG Sbjct: 62 TLKVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSTEVDVDVEVRLVGE--APGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris CGA009] gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris TIE-1] gi|68053168|sp|Q6N1P8|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; AltName: Full=RRP-L25 gi|226736356|sp|B3Q7X4|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009] gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris TIE-1] Length = 230 Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 76/184 (41%), Positives = 113/184 (61%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TT+ Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQSPLPISVEEKELRLRILAGRFLTTVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+K+GG Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA NIP I D++ L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|291298815|ref|YP_003510093.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] gi|290568035|gb|ADD41000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] Length = 205 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 7/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++SA R + GKG AR R+ G+IPA++YG+ PK ++L A++ + + + Sbjct: 1 MSEVRISAEPRTEFGKGGARRTRRAGKIPAVLYGHGEKPKHLSLPAREFAAVIRR-GGLN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++++I +PK Q DP+ D + H D L V +G VTV V + F E + Sbjct: 60 QLVSVEITDGTTELALPKALQRDPIKDTIEHVDLLLVRKGEKVTVEVRIDFTGEPE---- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + +++ A IP+S+ + + +++G +I + LP T+ +S + Sbjct: 116 -KGGLIVHNLDTLTVEADATAIPESVELSIEGMEVGSNITAAAVNLPSGTTLVSDPETVL 174 Query: 182 ATIVAPIS 189 T P + Sbjct: 175 VTHTQPRA 182 >gi|158312637|ref|YP_001505145.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] gi|158108042|gb|ABW10239.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] Length = 208 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 5/180 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 1 MSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTL++ + +PK+ Q P+ H D + V+ G V+V V + I E + Sbjct: 61 VLLTLELSGQTELALPKEVQRHPIRGSYEHVDLVLVNRGEHVSVEVALVLIGEADPDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++ +S+ A ++PD I VD+ L+ G I + LP+ + + + Sbjct: 120 ----VDQQVTALSVKADAASLPDRIEVDITGLEAGHGITAAQLELPQGVELEADGELVVV 175 >gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB5] gi|123721572|sp|Q131L9|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5] Length = 234 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 113/184 (61%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TT+ Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEDKELRLRILAGRFLTTVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+K+GG Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA +IP I D++ L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|239948215|ref|ZP_04699968.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] gi|239922491|gb|EER22515.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] Length = 203 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG I+L K+I+K F Sbjct: 1 MS-EILELEAKSRVEFGTGAARALRREGRVPAIIYGAGKTSVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFIFLEE-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSLKIELPKGCSFVTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|87122995|ref|ZP_01078855.1| probable ribosomal protein L25 [Marinomonas sp. MED121] gi|86161732|gb|EAQ63037.1| probable ribosomal protein L25 [Marinomonas sp. MED121] Length = 192 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 1/172 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R + GKG++R LR ++PA+IYG + P+ I + ++ K +++F TT+ Sbjct: 2 TLSINAVARSEEGKGASRRLRLANKVPAVIYGGDAAPQSITFAENELKKITENQDFFTTV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + + + VI K Q P S ++H DFL+V E +T +P+ F+ S G+K Q Sbjct: 62 VEVVTDGKAEKVIVKALQRHPASPAVMHVDFLRVDEARVITTRIPLNFVGAATSEGVKSQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 GG+L+V + C N+P ++ VD ++GD H+ D +LPE ++ Sbjct: 122 GGRLSVEAKLAEVRCLPANLPAALEVDCTKAQLGDIFHLSDAQLPEGVELVA 173 >gi|138893724|ref|YP_001124177.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus thermodenitrificans NG80-2] gi|166223684|sp|A4IJC8|RL25_GEOTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134265237|gb|ABO65432.1| General stress protein [Geobacillus thermodenitrificans NG80-2] Length = 210 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IPA++YG D K I++SA D+ K L + +++ Sbjct: 3 IVLGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ ++ Q DP+ L+HADF V + V V V VR + E +PG+K GG Sbjct: 62 TLKVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSAEVDVDVEVRLVGE--APGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium japonicum USDA 110] gi|71153127|sp|Q89DJ8|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 118/189 (62%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R K GKG+AR R+ G++P +IYGN P I++ +++ +R+ + F Sbjct: 1 MATTVKELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TT++ +D+ + VIP+DY LDPV D IH DF+++ EG+T+ + VP+ + SPG Sbjct: 61 LTTLVDIDLEGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG +N+V H + L C +IP I D+ L+IG S+H+ D++LP ++++ + T Sbjct: 121 VKRGGTVNIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTREDAT 180 Query: 181 IATIVAPIS 189 + TIV P Sbjct: 181 LVTIVPPSG 189 >gi|254388783|ref|ZP_05004015.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294813076|ref|ZP_06771719.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|197702502|gb|EDY48314.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294325675|gb|EFG07318.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] Length = 195 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N Sbjct: 1 MHMSEVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L+LDI IPK Q D + L+H D L V G VTV VPV+ E +PG Sbjct: 60 --VLLSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGE-LAPG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G V + + A +IP ++TV + L GD+IH +DI LP+ + Sbjct: 117 ---GNLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPKGVELAVDADAV 173 Query: 181 IATIV 185 + ++ Sbjct: 174 VIQVL 178 >gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter winogradskyi Nb-255] gi|109893373|sp|Q3SPM6|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255] Length = 228 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 120/184 (65%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+TTI Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEEPELRQRILAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + VIP+D+ LDPV D IH DF+++ EG+T+ V VP+R + + +PG+K+GG Sbjct: 65 DINLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +N+V H + + C A +IP I D+ L+I S+H+ D++LP +++ ++T+ TIV Sbjct: 125 TVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPLAREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|297545174|ref|YP_003677476.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842949|gb|ADH61465.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 202 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + + A+ RD +GK SAR L+K G IP I+YG ++ P+A+ + L ++ Sbjct: 1 MQSVSIEAIKRD-IGKNSARRLKKQGYIPGILYGKDMTENIPLAVEYNKFQRLLQ-QHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKFEGIGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 117 SKGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|21221562|ref|NP_627341.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces coelicolor A3(2)] gi|256787246|ref|ZP_05525677.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces lividans TK24] gi|289771145|ref|ZP_06530523.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] gi|71153667|sp|Q9K3T9|RL25_STRCO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|8894757|emb|CAB95917.1| ribosomal L25p family protein [Streptomyces coelicolor A3(2)] gi|289701344|gb|EFD68773.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] Length = 198 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKLTAETRTEFGKGAARRIRRDNKVPGVLYGHGSDPLHLTLPGHELLLALRTSN--- 57 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + IPK Q DP+ L H D V G TV+V +PV+ E +PG Sbjct: 58 VLIALDIDGKTNELAIPKSVQRDPIKGFLEHVDLQLVKRGETVSVEIPVQAEGE-LAPG- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V + + A +IP +TV + L+ G SIH +DI LP + + Sbjct: 116 --GFLLEYVLDALPVEAEATHIPQQVTVSVAGLEAGASIHAKDIALPSGVKLDVDGDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|23097515|ref|NP_690981.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] gi|71153156|sp|Q8EU33|RL25_OCEIH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|22775738|dbj|BAC12016.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] Length = 215 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 107/184 (58%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+A R+ + K + + +R +G++PA++YG DPK +++ + D+ K + + I+ Sbjct: 3 VKLNATKREDLTKSATKQIRLSGRVPAVVYGKAKDPKNVSVDSVDLVKTVRDE-GRNAII 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L + V V+ DYQ+DP+ D L+HADF V+ + V+V VR E K G K+GG Sbjct: 62 SLQVENSSVDVMLHDYQIDPIKDELLHADFYVVNMSEEMDVNVAVRLDGETK--GEKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L +E+ + NNIP+ I +D++DL +GDS+ + DI++ + + ++A++ Sbjct: 120 VLQQPFYEILVRAKPNNIPEEIVIDVSDLDVGDSVSVADIKVDGNYEILEDPDTSVASVT 179 Query: 186 APIS 189 P + Sbjct: 180 PPTT 183 >gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193] gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193] Length = 209 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G +P ++YG +DP I + + K+L + F Sbjct: 1 MAKEIPDLVAEERAGTGKGAARAARRAGMVPGVVYGGDADPLSIQIPFNVLLKKLKAGKF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + E V VI +D Q D V D+ H D +++ S + + +PV FINE+ P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSEINLFIPVEFINEDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL + +IGD I + I LP + Sbjct: 121 GVKKGGMLAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIELPTGARPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIAAPGG 190 >gi|86742631|ref|YP_483031.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia sp. CcI3] gi|109893363|sp|Q2J5Z0|RL25_FRASC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86569493|gb|ABD13302.1| LSU ribosomal protein L25P [Frankia sp. CcI3] Length = 210 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 4 AMSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGT 63 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTL++ + + KD Q P+ H D + V+ G V +PV+ I E + Sbjct: 64 NVLLTLELAEGTELALAKDVQRHPIKGSFEHIDLVLVARGEKVVADIPVQVIGEPHPDTL 123 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++ +++ A +P I VD+ L+ G SI + LP + + ++ + Sbjct: 124 -----VDQQVTTIAVKADATRLPGPIEVDITGLEPGTSILARQLVLPAGSELDADPDLVV 178 Query: 182 ATIVAPISGS 191 +A + + Sbjct: 179 VQCLAKRTNA 188 >gi|294496923|ref|YP_003560623.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] gi|294346860|gb|ADE67189.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] Length = 209 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + R +R G PA++YGN ++ PI L++ D K + + + Sbjct: 2 SISIQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIR-EAGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL + K+ V+ D Q DP+ + ++HADF V + V + + E + G K+G Sbjct: 61 LTLQVDKQKYSVMLHDIQTDPLKNEIVHADFQVVDMKKEIDTEVSLSLVGE--AKGTKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L HE+SL +IP SI VD++ L I D+I + DI++ +K T+A++ Sbjct: 119 GVLQQSLHEISLKGLPQDIPSSIDVDVSGLGINDTITVADIKVDKKLEITHDAQDTVASV 178 Query: 185 VAP 187 + P Sbjct: 179 LPP 181 >gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp. TM1040] gi|123379135|sp|Q1GK67|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040] Length = 209 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L +R GKG+AR R+ +P +++G +DP I + + KRL + F Sbjct: 1 MANEIPDLECQVRAGTGKGAARAARRANLVPGVVFGGDADPLAIQIPYNVLLKRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ S + + +PV FINE + Sbjct: 61 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + + Sbjct: 121 GLKRGGVLTVVRAEVELVVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGSKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum] Length = 191 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL +RD GKG AR LR++G +PA++YG+ + ++ KD+ K + Sbjct: 1 MEHSKLKVSVRDSTGKGVARTLRRSGHVPAVVYGSGKA-QSLSALLKDVEKAIQGHAGRN 59 Query: 63 TILTLDIGK----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L+I + +D Q DP++ ++H DFL+VSE + V VPV I + Sbjct: 60 GLFDLEISGGNSSRTALTLVRDIQRDPITGKILHVDFLEVSEKARVKNRVPVEVIG-SSP 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+VV E+ + C + +PD I VD + L I ++H+ D+ LP + + N Sbjct: 119 EGVKKGGILDVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPGVTVLDDPN 178 Query: 179 ITIATIVAPIS 189 I ++ P + Sbjct: 179 TVILHVIPPKA 189 >gi|315501801|ref|YP_004080688.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Micromonospora sp. L5] gi|315408420|gb|ADU06537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora sp. L5] Length = 231 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + K Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-KGGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +++ V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 60 QLFAIEVSDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +S+ A +PD + + + G +I D+ LP + + Sbjct: 120 -----IVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEETAV 174 Query: 182 ATIVAPISGS 191 A++ A + Sbjct: 175 ASVTAAPTAE 184 >gi|302865257|ref|YP_003833894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] gi|302568116|gb|ADL44318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] Length = 231 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + K Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-KGGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +++ V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 60 QLFAIEVSDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +S+ A +PD + + + G +I D+ LP + + Sbjct: 120 -----IVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEETAV 174 Query: 182 ATIVAPISGS 191 A++ A + Sbjct: 175 ASVTAAPTAE 184 >gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L +RD+ G GSAR LR+ G +P ++YG +P + L A +++ Sbjct: 1 MERVQLDVELRDETGTGSARRLREQGLVPGVVYGRNQEPINLKLDATELADV----TGGN 56 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L + E V+ KD Q D ++D +H DF Q++ + V VP+ E + G+K Sbjct: 57 AIIDLQVDGEEKTVMVKDVQKDVITDEYLHVDFHQIALDEPIVVEVPISL--EGVAEGVK 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V + C IP + +++++L++G+S+H+ D+ E + + + Sbjct: 115 EGGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEGIELTTSGDEVVV 174 Query: 183 TIVAPI 188 T+VAP Sbjct: 175 TVVAPT 180 >gi|296329554|ref|ZP_06872040.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672751|ref|YP_003864422.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] gi|296153297|gb|EFG94160.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410994|gb|ADM36112.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] Length = 205 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + T++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNTVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 62 LDVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D+++L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISNLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|302551981|ref|ZP_07304323.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] gi|302469599|gb|EFL32692.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] Length = 198 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R+ ++P ++YG+ SDP + L D+ L + N Sbjct: 1 MSEVKISAATRTEFGKGAARRIRREDKVPGVLYGHGSDPLHVTLPGHDLLMALRTPN--- 57 Query: 63 TILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + IPK Q DP+ L H D L V G V V + V E +PG Sbjct: 58 VLIALDIDGKTKELAIPKAVQRDPLKGFLEHVDLLLVKRGERVNVDIYVHTEGE-LAPG- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V + + + A +IP+S+TV + L GDSI +DI LP+ T+ + + + Sbjct: 116 --GFLLEHVLNALPVEAEATHIPESVTVSVEGLSAGDSILAKDITLPKGTTLAVEEDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|118603027|ref|YP_904242.1| 50S ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223716|sp|A1AXW4|RL25_RUTMC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118567966|gb|ABL02771.1| LSU ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 222 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A+ RD GKG++ LR+N +IPAI+YG P+ I L +I++ L ++ T++ Sbjct: 2 SLTINALTRDDQGKGASHRLRRNHKIPAIVYGTGKAPRNITLDVFEITRLLENEESYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + K+ VI KD Q P +I+ H DFL+++ + VP+ F E + ++ G Sbjct: 62 LDLIVDKKKEAVIIKDLQRHPAKNIVTHVDFLRINLKQAIVTSVPLHFNGEENNEAMRLG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT--SSMSQLNI--- 179 LN V + C ++P +I VD+++L +G+ I + +P+ ++++ +I Sbjct: 122 AILNQFVTSVEVSCLPTDLPHAIDVDISNLTMGEHISFTGLNIPKGVVITALTHGDIETH 181 Query: 180 --TIATIVAPI 188 ++ I P Sbjct: 182 NRSVVAIQEPR 192 >gi|307266021|ref|ZP_07547568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] gi|306918983|gb|EFN49210.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] Length = 202 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG ++ P+A+ + + L K+ Sbjct: 1 MQAISIEAIKRD-TGKNAARCLKNQGYIPAILYGKGMAESIPLAVEYNALQRLLQ-KHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGIGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 117 SRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|295401983|ref|ZP_06811945.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|312109199|ref|YP_003987515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] gi|294975985|gb|EFG51601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|311214300|gb|ADP72904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] Length = 210 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IP I+YG + K I ++ D K + + +++ Sbjct: 3 VVLEAKERTDRKHSTTRRIRLQGNIPGILYGKNVENKMIFVNGSDFQKTIR-EAGRHSLI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ +D Q D + ++H DF V + V + V +RFI E + G+K GG Sbjct: 62 TLKLNDEEYSVLLRDVQRDSLRGNILHVDFQAVDMSTEVDIDVDIRFIGE--AAGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H++S+ NIP SI +D++ L+IGD+I + D++ K + + IATI+ Sbjct: 120 VLQQNLHQLSIRVLPANIPPSIDIDISHLQIGDTITVGDVKTDGKYEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] Length = 233 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 119/183 (65%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+TTI Sbjct: 6 ELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEGAELRQRILAGRFLTTIFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + VIP+D+ LDPV D IH DF+++ EG+ + V VP+R + + +PG+K+GG Sbjct: 66 INLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + + C A NIP I D+ L+I S+H+ D+ LP ++++ ++T+ TIV Sbjct: 126 VNLVTHAIDIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTLAREDVTLVTIVP 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|297200252|ref|ZP_06917649.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] gi|197716994|gb|EDY61028.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] Length = 197 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKIAAETRSEFGKGAARRIRRDNKVPGVLYGHGSDPIHLTLPGHELLLALRTSN--- 57 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++LDI + IPK Q DP+ L H D V G V V + V+ + +PG Sbjct: 58 VLISLDIDGKTNELAIPKSVQRDPIKGYLEHVDLQLVKRGEQVNVEIFVQTEG-DLAPGA 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L V + + + A +IP+S+TV + L GDSI +DI LP+ T + + Sbjct: 117 ---FLLEHVLNALPVEAEATHIPESVTVSIEGLSAGDSILAKDIPLPKGTKLAVDEDTVV 173 Query: 182 ATIVA 186 ++A Sbjct: 174 LQVLA 178 >gi|83588951|ref|YP_428960.1| 50S ribosomal protein L25/general stress protein Ctc [Moorella thermoacetica ATCC 39073] gi|109893369|sp|Q2RMC2|RL25_MOOTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83571865|gb|ABC18417.1| LSU ribosomal protein L25P [Moorella thermoacetica ATCC 39073] Length = 208 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L MR +VGK +AR LR+ G++P IIYG + + A+ + L ++ +L Sbjct: 5 TLEVTMRPEVGKQAARRLRRQGKLPGIIYGKKIANLAVIIPARQLEHILATE-GENALLK 63 Query: 67 LDIGK----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L + + + ++ Q P+ L H DF QVS + VPV E + G+K Sbjct: 64 LVVSGDGQNKEFTAVIREVQRHPLKGNLTHVDFYQVSMEDKLRATVPVILEGE--ARGVK 121 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + ++P+SI VD++ L +G+ + + +I++P +S+ + IA Sbjct: 122 EGGILQHGVREIEIESLPADLPESIVVDVSHLGVGEHLTVGEIKVPAGVKILSEPDTVIA 181 Query: 183 TIV 185 T+V Sbjct: 182 TVV 184 >gi|148245095|ref|YP_001219789.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] gi|166223730|sp|A5CVE7|RL25_VESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146326922|dbj|BAF62065.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] Length = 225 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 7/190 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R+ GKG+ R LR+N +IPAI+YG P I L +I+ L ++ T++L Sbjct: 3 LTINALTRNYQGKGANRRLRRNNKIPAIVYGTGKPPSKITLDIFEITHLLKNEETYTSVL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + K VI K+ Q P + + H DFL+++ ++ +P++F E + ++ G Sbjct: 63 NLIVNKNKEAVIIKNLQRHPAKNSITHIDFLRINLNQSIITSIPIQFNGEEDNKAMRLGA 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-------MSQLN 178 LN + + C N+P SI VD++ L IG+ I++ DI +P+ + N Sbjct: 123 VLNQFMTAIEISCLPTNLPHSINVDISHLTIGEHINLTDINIPKGIVITALTHGDIETHN 182 Query: 179 ITIATIVAPI 188 +IA I P Sbjct: 183 QSIAIIQEPR 192 >gi|78042985|ref|YP_359067.1| 50S ribosomal protein L25/general stress protein Ctc [Carboxydothermus hydrogenoformans Z-2901] gi|109893351|sp|Q3AFL7|RL25_CARHZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77995100|gb|ABB13999.1| ribosomal protein L25 [Carboxydothermus hydrogenoformans Z-2901] Length = 197 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K++A +R K +G L K G++P ++YG +P +A++A+++ + + Sbjct: 3 KITASVRLKKTRGERNRLLKEGKVPGVMYGKNIEPVAVAVNARELESLVERG---LKLFE 59 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + + V+ K+ Q PV+ LIH DF V G + VPV E G+K GG Sbjct: 60 LSVEGKTQRVLVKELQHHPVTGKLIHVDFQVVESGRKIRQLVPVELYGE--PAGVKAGGI 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L EV++ C ++P+ I D++ L++GD + ++D+ LP + IA I A Sbjct: 118 LEHGLSEVTVECLPEDLPEFIEADVSKLEVGDCLRVKDLELPPGVRVIEDPESIIALISA 177 Query: 187 PI 188 P Sbjct: 178 PR 179 >gi|134297987|ref|YP_001111483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum reducens MI-1] gi|172044207|sp|A4J0Q5|RL25_DESRM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134050687|gb|ABO48658.1| LSU ribosomal protein L25P [Desulfotomaculum reducens MI-1] Length = 210 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R K + +R NG IP ++YG I++ AKD+ L S T++ + Sbjct: 6 LNANLRKTATKSIVKEIRNNGGIPGVVYGKHVGSMAISVDAKDLKNILGSVTGRNTLINM 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I V+ K Q+DP+ + H DF QVSE + + +PV+ + K G+ GG + Sbjct: 66 NINGSKQTVMVKSLQMDPMHQNIRHVDFQQVSENTKIRTVIPVQLVGTPK--GVAMGGVI 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI---ATI 184 + C N IP++I VD++ L+IGD++ + D+ LP + + T+ ATI Sbjct: 124 QHDLRSAEIECLPNRIPEAIQVDISGLEIGDTLSVSDLNLPPGVKILDHPHTTVVGLATI 183 Query: 185 VAP 187 AP Sbjct: 184 KAP 186 >gi|229819486|ref|YP_002881012.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] gi|229565399|gb|ACQ79250.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] Length = 214 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 7/181 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R + GKG+AR LR+ QIPA++YG+ +DP ++L + L +L L Sbjct: 5 ITATRRTEFGKGAARRLRRANQIPAVLYGHGTDPVHLSLPWHETFLALKGSA--NALLEL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + KD Q DPV + H D L V G VTV VP+ + E+ +PG Sbjct: 63 SFDDASELALAKDVQRDPVKGRIEHLDLLLVRRGERVTVEVPIHVVGES-APGTIH---- 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +++ A ++P+ ITVD+ L+ G + + D+ LP T + + + I P Sbjct: 118 TVDMQTLTVHAEATHLPEQITVDVEGLEDGTVVRVSDLVLPSGTDTDVDGEVPVVAISTP 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|78224043|ref|YP_385790.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter metallireducens GS-15] gi|109893365|sp|Q39RQ9|RL25_GEOMG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78195298|gb|ABB33065.1| LSU ribosomal protein L25P [Geobacter metallireducens GS-15] Length = 195 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 6/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M QK + R+K GKG +R LR G++P ++YG +P +++ AK+++ + + Sbjct: 1 MQQKTISI--EQREKAGKGVSRKLRAVGRVPGVVYGKGIEPVAVSVDAKELAAAIVGEGG 58 Query: 61 MTTILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +++L G L VI D Q P+ I DF +++ V VHVPV I + Sbjct: 59 RNNLISLQGGGSLNGNTVIVADLQKAPLKGTFISVDFHKINMDEKVRVHVPVALIG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K+GG L +V H + L C + IP+ + VD+ +L IG +IH+ ++ L ++ Sbjct: 117 LGAKEGGMLELVMHSLDLECLPSQIPEHVEVDVTNLAIGHAIHVGELVLAAGVKALDDPK 176 Query: 179 ITIATI 184 TI ++ Sbjct: 177 ATIVSV 182 >gi|229542278|ref|ZP_04431338.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] gi|229326698|gb|EEN92373.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] Length = 209 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ S+R LR+NG IP ++YG ++ P+ ++ + K L +N +L+L Sbjct: 5 LEAKKREDKHHSSSRRLRRNGYIPGVVYGYQTENTPVYVNDTEFEKLLR-ENGRNAVLSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ +V+ + Q DP+ + +IH DFL V+ V V V E S G+K GG L Sbjct: 64 NVNGTQRNVMVHEVQTDPLKNKIIHVDFLAVNMSEDVDATVRVVLTEE--SAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HE+S+ + IPD+ITVD+++L++ ++I + DIR + + TI +++ P Sbjct: 122 QQALHELSITAKPDEIPDAITVDVSNLQVNENITVADIRGKYGFTINHEDTETICSVLPP 181 Query: 188 I 188 Sbjct: 182 R 182 >gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] Length = 209 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R+ +P +++G +DP I + + KRL + F Sbjct: 1 MANEIPDLECQERAGTGKGAARAARRAHMVPGVVFGGDADPLAIQIPYNVLLKRLKAGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ S + + +PV FINE + Sbjct: 61 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + Sbjct: 121 GLKRGGVLTVVRAEVELIVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB18] gi|109893388|sp|Q219F9|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18] Length = 240 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 113/183 (61%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R GKG+AR R+ G++P +IYG+ P I++ ++ R+ + F+TTI Sbjct: 6 ELKATARPAGGKGAARAERRAGRVPGVIYGDNKPPVTISVDDTELRARILAGRFLTTIFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + VIP+D+ LDPV D IH DFL++ EG+ + V VP+ N +PG+K+GG Sbjct: 66 VELDGQKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHLKNAEGAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L A +IP I D++ L IG S+H+ D+ LP+ ++S+ ++T+ TIV Sbjct: 126 VNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVKTLSREDLTLVTIVP 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|328882994|emb|CCA56233.1| LSU ribosomal protein L25p [Streptomyces venezuelae ATCC 10712] Length = 197 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG+AR +R+N Q+PA++YG+ S+P + L A D++ L + N Sbjct: 1 MSEVKLAAAVRTEFGKGAARAIRRNAQVPAVVYGHGSEPAHVTLPAHDLALALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI + IPK Q D + L+H D L V G VTV +PV+ E + G Sbjct: 58 VLLSLDIDGKNELAIPKAVQRDAIKGFLVHVDLLLVKRGEKVTVEIPVQAEGELAAGG-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V +S+ A ++P++++V + L+ G S+ +DI LP+ + ++ + + Sbjct: 116 --NLLEHVLSTLSVEAEATHLPEAVSVSVEGLEAGASVLAKDITLPKGATLVTDADAVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|295702290|ref|YP_003595365.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] gi|294799949|gb|ADF37015.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] Length = 209 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + R +R G PA++YGN ++ PI L++ D K + + + Sbjct: 2 SISIQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIR-EAGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL + K+ V+ D Q DP+ + +IHADF V + + V + + E + G K+G Sbjct: 61 LTLQVDKQKYSVMLHDIQTDPLKNEIIHADFQVVDMKKEIDIEVSLSLVGE--AKGTKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L +E+SL +IP SI VD+++L I D+I + DI++ +K T+A++ Sbjct: 119 GVLQQSLYEISLKGLPQDIPSSIDVDVSELGINDTITVADIKVDKKLEITHNAEDTVASV 178 Query: 185 VAP 187 + P Sbjct: 179 LPP 181 >gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Alicycliphilus denitrificans BC] gi|330823568|ref|YP_004386871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] gi|317116258|gb|ADU98746.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans BC] gi|329308940|gb|AEB83355.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] Length = 208 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 98/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 1 MQFVAYERAKQGTGASRRLRISGKAPGIVYGGSAEPQMIEVDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D Q P ++H DF +V + + V + VP+ + SP +K +G Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVPLHYEGLEGSPAVKEEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HEV ++C + +P+ ITVDL+ L + ++ +++P + S N + Sbjct: 121 CTVTPLIHEVDVMCMPSQLPEFITVDLSGLTSKSAPGVQSLKIPNGVKIVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 VSIKLP 186 >gi|291439151|ref|ZP_06578541.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] gi|291342046|gb|EFE69002.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] Length = 195 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N Sbjct: 1 MNMADVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L GKE IPK Q DP+ L H D L+V G V V +PV+ E +PG Sbjct: 61 LIELLI--DGKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGE-LAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G L V + + A IPD +TV + L+ G S+ +DI LPE + Sbjct: 118 ---GNLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPEGVKLAVDEDAV 174 Query: 181 IATIV 185 + ++ Sbjct: 175 VLQVL 179 >gi|302036153|ref|YP_003796475.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] gi|300604217|emb|CBK40549.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] Length = 255 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 102/188 (54%), Gaps = 6/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+ R+ GKG AR LR+ G++PA++YG + +++ ++ K L S+ T ++ Sbjct: 3 FDLTVESREGGGKGPARQLRRAGRVPAVLYGQG-ECLLLSVKPDELVKILRSQAGSTALI 61 Query: 66 TLDIGKELVHV----IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L I + +D+Q+DP++ ++HADF +V+ + V VPV + G+ Sbjct: 62 SLTINGAKSKAKRTALLRDFQVDPIAGSVLHADFFEVAMDKPIRVKVPVHLTG-GQPIGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L+ V ++ + C + +PD I VD + L+I IH++DI E + L + Sbjct: 121 KEGGVLHHVLRQLHIECLPSVLPDFIEVDASQLQINQGIHLKDIPKTEGLRFLDDLEHMV 180 Query: 182 ATIVAPIS 189 ++ AP++ Sbjct: 181 VSVAAPMT 188 >gi|307823425|ref|ZP_07653654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] gi|307735410|gb|EFO06258.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] Length = 199 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R + GK +AR R+ G +PA+IYG +P+ + L+ ++ K L + + +L Sbjct: 5 FEFVAESRGQSGKSAARRARRAGNVPAVIYGGHGEPQMLLLNHNEVIKHLAHEAVYSHVL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++I + V+ K Q P ++H DFL+V+ + VHVP+ F+NE S G K+GG Sbjct: 65 GVNIDGKTERVVLKGVQRHPAKFQVLHMDFLRVTMSEALKVHVPLHFVNEQTSVGGKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNIT 180 + +V + C +PD I VDL L IG+S H+ DI LP + S+ + Sbjct: 125 IVTHAMIDVEVSCLPAALPDYIEVDLGGLDIGESAHLSDIVLPAGVEIVALAQGSEHDHP 184 Query: 181 IATIVA 186 +A+++A Sbjct: 185 VASMMA 190 >gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris HaA2] gi|109893387|sp|Q2ISF7|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2] Length = 240 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 114/184 (61%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K GKG+AR R+ G++P +IYG+ P PI++ KD+ R+ + F+TTI Sbjct: 5 MEFKATARPKSGKGAARAERRAGRVPGVIYGDNKPPLPISVEDKDLRLRIQAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D +H DFL++ EG+T+ + VP+ +PG+K+GG Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA+ IP I D++ L IG S+H+ DI LP+ S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVKSVSREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|302560229|ref|ZP_07312571.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] gi|302477847|gb|EFL40940.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] Length = 199 Score = 190 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA RD+ GKG+AR +R++ ++P ++YG+ SDP+ + ++ L + N Sbjct: 1 MSEVKISAATRDEFGKGAARRIRRDNKVPGVLYGHGSDPRHLTFPGHELLMALRTPN--- 57 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + IPK Q DP+ L H D L V G V V +PV+ E +PG Sbjct: 58 VLIALDIDGKSNELAIPKSVQRDPIKGFLEHVDLLLVKRGEKVQVEIPVQTEGE-LAPG- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V + + A +IP+S+TV + L+ G ++ +DI LP + + + + Sbjct: 116 --GYLLEHVLSALPVEAEATHIPESVTVSVEGLEAGAAVLAKDITLPSGVTLAVEEDAVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|225025469|ref|ZP_03714661.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] gi|224941753|gb|EEG22962.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] Length = 190 Score = 190 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K+ A +R++ G G++R LR+ G++PA++YG SD +++ K + L + F T I Sbjct: 2 SFKIEAQVREEQGTGASRRLRREGRVPAVVYGAGSDATAVSVDHKTVFFALQKEEFHTAI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ PV + H DF V G + + +P+ +N KS +K Q Sbjct: 62 IKLALNGKEHDVIVRDFQMHPVRREVRHIDFQIVEAGKPIKIRLPLHVVNAEKSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 ++ ++ V +L +IP + +D + GD +H+ DI+ PE S S N+ Sbjct: 122 NSRVALLSTSVEVLLDPKHIPSELVLDCEKVVAGDVLHLSDIQYPEGVESTSLRRGANLA 181 Query: 181 IATIVA 186 +AT+ A Sbjct: 182 VATVTA 187 >gi|294669393|ref|ZP_06734472.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308803|gb|EFE50046.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 190 Score = 190 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A +R+ G G++R LR+ GQ+PA++YG + IAL K + L ++F T++ Sbjct: 2 SYELQATVREAQGTGASRRLRREGQVPAVLYGENQEAVAIALDHKTVFYALEKESFHTSL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P + H D V + + +P+ +N +S +K Q Sbjct: 62 IKLALNGKTHDVIVRDFQVHPFRQQIQHLDLQVVDLNKPLKIRLPIHVVNAEQSKAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G+++++ V ++ NIP ++ +D + GD +H+ DI+ PE SS++ N+ Sbjct: 122 SGRVSLLTTGVEVIVDPKNIPAALELDCAQVVAGDILHLSDIQYPEGVSSVALKRNSNLA 181 Query: 181 IATIVAPIS 189 +AT+ Sbjct: 182 VATVTGKKG 190 >gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter hamburgensis X14] gi|122417117|sp|Q1QIV7|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14] Length = 233 Score = 190 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 118/183 (64%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++P +IYGN P+PI++ ++ +R+ + F+TT+ Sbjct: 6 ELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPQPISVEEPELRQRILAGRFLTTVFD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + + VIP+D+ LDPV D IH DFL++ EG+T+ V +P+R + + +PG+K+GG Sbjct: 66 ISLEGKKHRVIPRDFHLDPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H + + C A++IP I D+ L++ S+H+ D+ LP +++ ++T+ TIV Sbjct: 126 VNLVIHAIDVECAADDIPQFIEADVGGLEMSHSLHLSDVELPPGVKPLAREDMTLVTIVP 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter pasteurianus IFO 3283-01] gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01] gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03] gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07] gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22] gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26] gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32] gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12] Length = 204 Score = 190 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIVKGIQTSGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAP 187 + TVDL+ L I D++ ED++ E + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTEGVTPLTHEENFVVASIAAP 187 >gi|284989492|ref|YP_003408046.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] gi|284062737|gb|ADB73675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] Length = 234 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L A R + GKGSAR R+ G+IPA++YG+ D ++L A++ + L + + Sbjct: 3 DFRLVAEARTEFGKGSARRTRRAGRIPAVLYGHGQDVVHLSLPAREFAAALRN-GGSNAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ + E + K Q DP++ + H D L V G TV VP+ + E PGI Sbjct: 62 ITVVLDGEEQLALTKAVQRDPLTRVHEHVDLLLVRRGERTTVDVPIVVVGE---PGIDA- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 N + VS+ A N+PD+I VD+ G +I DI LP ++ ++ + Sbjct: 118 -IPNHQLNTVSIEADATNLPDTIEVDVTGRTAGQNITAGDIVLPRGSTLITDPEALV 173 >gi|40219|emb|CAA34524.1| unnamed protein product [Bacillus subtilis] Length = 186 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNAVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 62 LEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|134097416|ref|YP_001103077.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|291004594|ref|ZP_06562567.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|133910039|emb|CAM00151.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] Length = 208 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 7/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+ R + GKG+AR R+ G++PA++YG+ SDPK ++L A + ++ + +N Sbjct: 1 MSEVRLTVEPRTEFGKGAARRTRRAGKVPAVLYGHGSDPKHLSLPAVEFARAIR-ENGHN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTLD+ G + K P+ + + H D L V G VTV+VPV E Sbjct: 60 AVLTLDVAGSNSELALTKTITTHPIKNYIEHVDLLLVQRGEKVTVNVPVVLTGEAGP--- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G + E+S+ A +IP+ + + ++G I +I LP + + I Sbjct: 117 --GTLVTHEVTELSVEAEALHIPEQFEISIEGAEVGTQITASEIVLPRGVVLQTDEELLI 174 Query: 182 ATIVAPIS 189 + S Sbjct: 175 VNVTEAPS 182 >gi|16077120|ref|NP_387933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221307862|ref|ZP_03589709.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221312184|ref|ZP_03593989.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317117|ref|ZP_03598411.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. JH642] gi|221321380|ref|ZP_03602674.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. SMY] gi|321313722|ref|YP_004206009.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] gi|585017|sp|P14194|CTC_BACSU RecName: Full=General stress protein CTC; AltName: Full=50S ribosomal protein L25 gi|467441|dbj|BAA05287.1| expressed at the end of exponential growyh under condtions in which the enzymes of the TCA cycle are repressed [Bacillus subtilis] gi|2632319|emb|CAB11828.1| ribosomal protein Ctc, binding 5S RNA [Bacillus subtilis subsp. subtilis str. 168] gi|291482424|dbj|BAI83499.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. natto BEST195] gi|320019996|gb|ADV94982.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] Length = 204 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNAVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ E V+ D Q DP+ + + HADF V+ + V VP+ E + G+K GG Sbjct: 62 LEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGE--AIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|116669780|ref|YP_830713.1| 50S ribosomal protein L25P [Arthrobacter sp. FB24] gi|116609889|gb|ABK02613.1| LSU ribosomal protein L25P [Arthrobacter sp. FB24] Length = 199 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + Sbjct: 1 MSEQKLAAEVRTEFGKGFARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVR---VAN 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI E + KD Q DP+ I+ H D L V G VTV VPV E Sbjct: 58 ALLTLDINGEQHLALVKDIQRDPIKQIIEHLDLLTVRTGEKVTVDVPVHVTGELAP---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G N VSL A ++P ++ V + G+ IH D+ LP+ + ++ + Sbjct: 114 -GNVYNQEMTVVSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLPKGSVLLADPESLVV 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|326441622|ref|ZP_08216356.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces clavuligerus ATCC 27064] Length = 193 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N Sbjct: 1 MSEVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI IPK Q D + L+H D L V G VTV VPV+ E +PG Sbjct: 58 VLLSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGE-LAPG-- 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G V + + A +IP ++TV + L GD+IH +DI LP+ + + Sbjct: 115 -GNLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPKGVELAVDADAVVI 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. BTAi1] gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 99/156 (63%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 IYG+ P PI++ +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH Sbjct: 2 IYGDNQPPLPISVEDRELRQRILAGRFLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIHV 61 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLND 153 DF+++ +G+T+ V VP+ + +PG+K+GG +N+V H + L C A NIP I D++ Sbjct: 62 DFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVSA 121 Query: 154 LKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 L+I S+H+ D++LP ++S+ + T+ TIV P Sbjct: 122 LEINHSLHISDVKLPTGVKTLSREDATLVTIVPPSG 157 >gi|209886302|ref|YP_002290159.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] gi|226736343|sp|B6JIP4|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] Length = 240 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 116/183 (63%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+TT+ Sbjct: 6 ELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQSIFAGHFLTTLFN 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ + VIP+DY LDPV D +H DFL++ EG+T+ V VP+ SPG+K+GG Sbjct: 66 IDLDGQKYRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAELSPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +N+V H V L ++IP I VD++ L+I +S+H+ D+ LP+ + + +T+ T+V Sbjct: 126 VNIVNHTVELEAEVDHIPQFIEVDVSKLEINNSVHLNDVALPKGVKPVLREGMTLVTVVP 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|317124066|ref|YP_004098178.1| 50S ribosomal protein L25P [Intrasporangium calvum DSM 43043] gi|315588154|gb|ADU47451.1| LSU ribosomal protein L25P [Intrasporangium calvum DSM 43043] Length = 227 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KLSA R GKG+AR +R+ G IPA++YG+ + P I L D + L N +L Sbjct: 5 TKLSAEKRTDFGKGAARKIRRAGNIPAVMYGHGTAPVHITLPGHDTFQALRHTN---ALL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+ + + + KD Q DP+ I+ H D + V +G VTV +PV E + Sbjct: 62 TIVVDGKEALALAKDIQRDPIKPIIEHVDLVVVRKGEKVTVEIPVHLEGEAAPETV---- 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + + A +IP+++ + + L G I + LPE T+ + + + Sbjct: 118 -VTLDHSSLQVEAEATHIPENVVISIEGLPAGTQILAGAVTLPEGTTLATDPEALVVNVT 176 Query: 186 APIS 189 IS Sbjct: 177 QAIS 180 >gi|329941174|ref|ZP_08290453.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] gi|329299705|gb|EGG43604.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] Length = 197 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R+ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKLAAAKRTEFGKGAARRIRREDKVPGVLYGHGSDPIHLTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI E IPK Q DP+ L H D V G V V + V E +PG Sbjct: 58 VLIALDIEGEGQELAIPKSVQRDPIKGFLEHVDLQLVQRGEKVNVEIYVNTEGE-LAPG- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L V + + + A +IP+S+TV + L GDS+ +DI LP T + + Sbjct: 116 --GNLLEHVLNTLPVEAEATHIPESVTVSVEGLAAGDSVLAKDIPLPSGTKLGVDGDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|297157756|gb|ADI07468.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces bingchenggensis BCW-1] Length = 193 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 7/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR R+ G +P ++YG+ ++P + L D+ L + N + Sbjct: 3 EVKISAKSRTEFGKGAARRDRREGLVPGVVYGHGAEPVHVNLPGHDLMLALKTPN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LDI + VIPK Q D + L H D L V G VTV V V+ E +PG G Sbjct: 60 LGLDIEGKKELVIPKAIQRDAIKGFLKHVDLLLVKRGEKVTVEVRVQTEGE-LAPG---G 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + + + + A +IP+S+TV + L G SI +DI LP T+ + + + + Sbjct: 116 NLLEHLLNALPVETEATHIPESVTVSIAGLDAGHSILAKDITLPAGTTLAVEEDTVVLQV 175 Query: 185 VA 186 V Sbjct: 176 VG 177 >gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] gi|109893377|sp|Q4FPH0|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] Length = 228 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+TL Sbjct: 4 LDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG L Sbjct: 64 NLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVA 186 N+V ++ L CP+ IP +IT+DL+ + IG+S + ++L E + + + IAT+ A Sbjct: 124 NIVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLAA 183 Query: 187 PI 188 P Sbjct: 184 PT 185 >gi|295110890|emb|CBL27640.1| ribosomal protein L25, Ctc-form [Synergistetes bacterium SGP1] Length = 216 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 3/177 (1%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILTLDI 69 R++ GKG+ LR+ G P I YG + L +D+ + L + + + L + + Sbjct: 2 EPREETGKGANGRLRRKGYTPCIFYGPQMEKSVQGKLKTRDVERILATGRWESMRLNVTL 61 Query: 70 -GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 I ++ Q++P++D +H DFL++ +G +TV++P+ + +PG+K GG L Sbjct: 62 PDGTEEMCIIREVQVNPLTDCPLHVDFLRLIKGRKITVNIPIEVLGRESAPGVKDGGVLE 121 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 EV + NIPD +TVD++ L+IGD+IH+ D+ LPE + + +A +V Sbjct: 122 T-LREVEVETLPMNIPDVLTVDVSALQIGDAIHVRDLALPEGVELKADPDEIVAVVV 177 >gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] Length = 228 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 1/182 (0%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+TL Sbjct: 4 LDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG L Sbjct: 64 NLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVA 186 N+V ++ L CP+ IP +IT+DL + IG+S + ++L E + + + IAT+ A Sbjct: 124 NIVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLAA 183 Query: 187 PI 188 P Sbjct: 184 PT 185 >gi|269468550|gb|EEZ80199.1| ribosomal protein L25/general stress protein Ctc [uncultured SUP05 cluster bacterium] Length = 218 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 7/175 (4%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR LR+ ++PAI+YG DP I L+ +I+ L T++L L I K+ VI KD Sbjct: 3 ARRLRREEKVPAIVYGAGKDPSAITLNIHEITHLLEKDGAFTSVLDLAIDKKTESVIIKD 62 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q P + + H D L+++ T+T ++P+ FI E+ + ++ G LN + V + C Sbjct: 63 LQRHPAKNCITHVDLLRINMKQTITTNIPLNFIGEDDNEAMRLGAILNQFINTVEVSCLP 122 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-------MSQLNITIATIVAPI 188 ++P+ I VD++ L+IGD I + + LPE + + ++ + P Sbjct: 123 ADMPNGIDVDISGLEIGDHISLTGLSLPEGVILTALTHDDIEAHDQSVVAVQEPK 177 >gi|160900866|ref|YP_001566448.1| 50S ribosomal protein L25/general stress protein Ctc [Delftia acidovorans SPH-1] gi|226736305|sp|A9BP18|RL25_DELAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160366450|gb|ABX38063.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Delftia acidovorans SPH-1] Length = 209 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++ + I + + L + F ++IL Sbjct: 1 MQFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V + + V + VP+ F +S +K + Sbjct: 61 DMEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C +P+ ITVDL+ L ++ ++ ++LP ++ S N + Sbjct: 121 CTITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGLKLPNGVKAVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 ISIKLP 186 >gi|50842019|ref|YP_055246.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] gi|50839621|gb|AAT82288.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] Length = 229 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 29 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 85 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 86 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 140 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 141 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATV 200 Query: 185 VAPIS 189 P + Sbjct: 201 AFPET 205 >gi|121593316|ref|YP_985212.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax sp. JS42] gi|222110037|ref|YP_002552301.1| 50S ribosomal protein l25/general stress protein ctc [Acidovorax ebreus TPSY] gi|166223657|sp|A1W4G1|RL25_ACISJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801044|sp|B9ME47|RL25_DIAST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120605396|gb|ABM41136.1| LSU ribosomal protein L25P [Acidovorax sp. JS42] gi|221729481|gb|ACM32301.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax ebreus TPSY] Length = 208 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 1 MQFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D Q P ++H DF +V E + V + VP+ F S +K +G Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C +P+ I VDL+ L ++ ++ ++LP ++ S N + Sbjct: 121 CTVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLPHGVKAVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 VSIKLP 186 >gi|220915259|ref|YP_002490563.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] gi|254801032|sp|B8J805|RL25_ANAD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219953113|gb|ACL63497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] Length = 240 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 2/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+ Sbjct: 3 ENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ +G Sbjct: 63 LELQVDGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVAEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + + Sbjct: 121 GILSVATHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVVFV 180 Query: 185 VAP 187 P Sbjct: 181 AVP 183 >gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] Length = 208 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 5/180 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+SA R+K+G +R +R+ G+IPA++YG+ DP +++ D+ + ++ + Sbjct: 9 KISATKREKLGSIESRHIRRAGRIPAVVYGHGQDPAHVSVDEHDLQDLVKNRE---RVFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ ++ + +D Q D ++H D ++++ VT+ VPVR SPG GG Sbjct: 66 IDVDGKVEETMLRDLQWDTFGTQILHVDLIRINASERVTLEVPVRLRG--TSPGATDGGI 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L H + L C A++IPD I+V +N L+IGD+IH+ DI +P + + + ++A Sbjct: 124 LEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDIEVPRGCKIHNDPELVVVHVLA 183 >gi|158522828|ref|YP_001530698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] gi|226736308|sp|A8ZXZ4|RL25_DESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158511654|gb|ABW68621.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] Length = 217 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ KE L R G + + LR+ G +PAI+YG+ +DP P+A+ L Sbjct: 1 MELKE--LQVKTRQMAGGPTPKALRRQGFVPAIVYGHKNDPLPLAVDDHTFRLLLKDAGQ 58 Query: 61 MTTI-LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L +D G V+ K+ Q PVS LIHADF +V +T +VPV Sbjct: 59 QALLSLVIDDGAASKTVMLKELQQHPVSLKLIHADFHEVDLTKKITTYVPVATTG--VCK 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG L ++ E+ + C IP+SI +D++ L IGDS+H+ DI PE + ++N Sbjct: 117 GEKEGGVLQLIRRELEVRCLPGLIPESIAIDISALDIGDSVHVADIEAPEGVELVHEVNF 176 Query: 180 TIATIVAPI 188 T+ + AP Sbjct: 177 TVIAVAAPT 185 >gi|148284981|ref|YP_001249071.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Boryong] gi|166223699|sp|A5CF34|RL25_ORITB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146740420|emb|CAM80897.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong] Length = 207 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +R G SAR LR+ G++P +IY P + K+++K F + Sbjct: 2 NEMLTLVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAKLYRKPFFSS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV-TVHVPVRFINENKSPGI 121 T++ L + + V+PK QL PV++ + H DF+ V + ++ V VP+ F + KS GI Sbjct: 62 TVIQLQVDDQRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKEKSLGI 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNIT 180 K+GG LN+V V LLCP + IP I D+ ++ +G SI + + LPE + + S + Sbjct: 122 KRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLVKSTTDYV 181 Query: 181 IATIVAPIS 189 IA+++ S Sbjct: 182 IASVIGKSS 190 >gi|194017996|ref|ZP_03056603.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] gi|194010333|gb|EDW19908.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] Length = 208 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+T Sbjct: 3 TLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ + Q DP+ + L+HADF V + VPV+ I E S G+K GG Sbjct: 62 LDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGE--SKGVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L E+S+ +IP I D+ +L++ D + + D+ + + +A+I+ Sbjct: 120 LQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLSVQSSYQVNNDPEEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] Length = 204 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIIKGIQASGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAP 187 + TVDL+ L I D++ ED++ + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTAGVTPLTHEENFVVASIAAP 187 >gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] Length = 200 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 6/164 (3%) Query: 31 PAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDIL 90 PA++YG +P I L KD K L ++ F T I+ +D+ VI KD Q P Sbjct: 2 PAVVYGTDKEPTSITLIRKDFEKMLEAETFYTAIIDIDVEGTHESVILKDLQRHPAKGFP 61 Query: 91 IHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDSITV 149 +HADFL+++ + + V +P+ F+NE+ G+K GG + ++ + C NIP+ I V Sbjct: 62 MHADFLRINADTELKVAIPIHFMNEDTCVGVKVNGGVIQRQETDIEVSCLPRNIPEYIEV 121 Query: 150 DLNDLKIGDSIHMEDIRLPEKTSSMSQL-----NITIATIVAPI 188 D+ L IGDSIH+ D+ LPE S + ++ I ++VAP Sbjct: 122 DMAALDIGDSIHLTDVTLPEGVVSTALEFGELTDLMIVSVVAPR 165 >gi|157690834|ref|YP_001485296.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pumilus SAFR-032] gi|166987890|sp|A8F919|RL25_BACP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157679592|gb|ABV60736.1| stress induced RNA binding ribosomal protein L25p family [Bacillus pumilus SAFR-032] Length = 208 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+T Sbjct: 3 TLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ + Q DP+ + L+HADF V + VPV+ I E S G+K GG Sbjct: 62 LDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGE--SKGVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L E+S+ +IP I D+ +L++ D + + D+ + + +A+I+ Sbjct: 120 LQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLPVQSSYQVNNDPEEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc [Halorhodospira halophila SL1] gi|166223688|sp|A1WVQ2|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1] Length = 209 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R + G+G+ R LR+ ++P ++YG +P+P+AL + + L + F +TI Sbjct: 4 EMRLDAHPRTETGRGAMRRLRRARRVPGVVYGAGKEPQPVALENDQLYRLLEEEAFFSTI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + +G E I KD Q P ++ H D +V E +TVHVP+ E +SPG+K+G Sbjct: 64 LKVQMGSETEQAIVKDLQRHPFKPLVQHIDLQRVREDQPITVHVPLHVHGEEQSPGVKKG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNI 179 G L+ ++ ++C ++P I VD++ LK+G ++H+ ++ LPE S + + + Sbjct: 124 GVLHHDLLDLEVVCLPKDLPPFIDVDVSSLKVGQAVHISELTLPEGVQSAALQQGEEYDA 183 Query: 180 TIATIVA 186 + ++ A Sbjct: 184 PVVSVQA 190 >gi|330465678|ref|YP_004403421.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] gi|328808649|gb|AEB42821.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] Length = 235 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + K Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIR-KGGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +++ +PK Q DP+ D H D L V G VTV VPV E + Sbjct: 60 QLFAIEVSDGTQALALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVELTGEAAKDTL 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + VS+ A +PD + + + G + D+ LP T+ Sbjct: 120 -----IVHDHDTVSVTAEATKVPDHLEASIEGAEPGVQVTAADVDLPAGVELAGDPEQTV 174 Query: 182 ATIVAPISGS 191 AT+ A + Sbjct: 175 ATVTAAPTAE 184 >gi|225181558|ref|ZP_03735000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] gi|225167806|gb|EEG76615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] Length = 214 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ AV R+KV K + LR +G +P I+YG D IA+ +KDI L S Sbjct: 1 MERVQVQAVPREKVTKSQLKELRNSGMVPGIVYGQKDDAVAIAVDSKDIISILQSAAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDP-VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ L + VI K+ D + D H DFL++S + V VPV F + G+ Sbjct: 61 SLVDLAVEGNKETVIIKELVEDIFIQDRFTHVDFLRISLKDKLEVQVPVIFTG--DAVGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L + EVSL C IP+SI +D+++L +G+++ + D+ +P +++ + + Sbjct: 119 KEGGTLQPLLREVSLKCLPTEIPESIELDISNLSVGETLTVGDLTVPASAELLNEADEAV 178 Query: 182 ATIVAPI 188 ++ AP Sbjct: 179 VSVAAPR 185 >gi|317126792|ref|YP_004093074.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] gi|315471740|gb|ADU28343.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] Length = 212 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ + +R +G +P +IYG KP+ + + K + +N + Sbjct: 3 TLQANTREDLRGSRLNKIRNDGNVPGVIYGKTIGNKPVTVEGSSLLKMIR-ENGRNGVFK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ + V+ D Q+DP+ + +IH DF S + VPV+ + E + G+K GG Sbjct: 62 LDVDGQQTDVMIYDIQVDPLKNEVIHVDFYAADMKSELDADVPVQAVGE--AIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L HEVS+ N++PDSI +D++ L + DS+ ++D++ K + ++ +I+ Sbjct: 120 LQQSLHEVSVKALPNDLPDSIEIDVSQLDVNDSLQVKDLKTSGKYEINNDPEESVLSILP 179 Query: 187 PI 188 P Sbjct: 180 PT 181 >gi|188584704|ref|YP_001916249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] gi|226736340|sp|B2A3N5|RL25_NATTJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179349391|gb|ACB83661.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 215 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD+KE L R K + LR N +IPA++YG + K +++ +++ L + Sbjct: 1 MDRKE--LQVKERTVTRKSEVKKLRTNNEIPAVLYGKNIESKKLSIEKRELLDALSTAAG 58 Query: 61 MTTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L L + E I K+ Q DP+ IH DF + T+ V VP+ E Sbjct: 59 DNVLLDLKLDNGESYPAIFKEIQKDPIKGFFIHIDFHTIDLKETLQVSVPLNIEGE--PV 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG E+ + C IPD I VD++++ + +SI++ D+ LPE + +++ Sbjct: 117 GVENGGIPQYQLREIEIECLPTQIPDHIEVDVSNIDLNESINVGDLPLPEGSELVTEPEE 176 Query: 180 TIATIVA 186 T+ ++VA Sbjct: 177 TVMSVVA 183 >gi|169628236|ref|YP_001701885.1| 50S ribosomal protein L25 [Mycobacterium abscessus ATCC 19977] gi|169240203|emb|CAM61231.1| 50S ribosomal protein L25 [Mycobacterium abscessus] Length = 215 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%) Query: 1 MDQK----ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY 56 M +K L +R GKG++R R++GQ+PA++YG+ + P+ + L A D + L Sbjct: 1 MSKKNTPTSNNLDVTVRTDTGKGASRRARRDGQVPAVLYGHGTTPEHLNLPAHDFAAVLR 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + ILTL+I + K ++ P+ L+HAD L V +G VTV V V + Sbjct: 61 H-SGTNAILTLNIEGREQLALTKTIEIHPIRRNLVHADLLVVRKGEKVTVEVTVHIEGDA 119 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 S G + + + + A +IP+ +TV + L+ G I I LP+ + +S Sbjct: 120 AS-----GTLVTQDANTLEIEAEALSIPEGLTVSVEGLEAGTQITAGSIELPKGVTLISD 174 Query: 177 LNITIATIV-APISG 190 + +V AP + Sbjct: 175 PETLVVNVVTAPTAA 189 >gi|20808386|ref|NP_623557.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter tengcongensis MB4] gi|71153671|sp|Q8R8L3|RL25_THETN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|20516998|gb|AAM25161.1| Ribosomal protein L25 (general stress protein Ctc) [Thermoanaerobacter tengcongensis MB4] Length = 199 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 + L AV R+ GK +AR L+ G +PAI+YG ++ P+A+ + K L K Sbjct: 1 MQAITLEAVKRE-TGKSAARRLKNQGYVPAIMYGKDMTENIPLAVEYTKLQKLLQ-KYGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + K+ Q D + +IH DF +VS + VP+RF Sbjct: 59 NVLLNVVVNGTTHTALIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLRFEGIGLIE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI +PE + + Sbjct: 117 SKGGIVQHQLWELTVESLPDKIPQEIVVDLSHLEIGDTLFVKDIPVPEGVKVLDDPEEIV 176 Query: 182 ATIVAPI 188 +I+ P Sbjct: 177 VSILVPK 183 >gi|282879284|ref|ZP_06288029.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] gi|281298566|gb|EFA90990.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] Length = 217 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-----NMSDPKPIALSAKDISKRLYS 57 KE +S R+ +GK +++ LRK G +P IYG + A ++ K +Y+ Sbjct: 1 MKEINVSGKKREDLGKKASKQLRKEGYVPCNIYGAAQADGKPEALAFAAPMSELRKVVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + Sbjct: 61 PHIY--VINLNIDGESHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ +V++ P IP+ + +D+ +LKIG SI + + E + Sbjct: 117 AQGVRDGGRMNLSIRKVNVTAPYQRIPEHLDIDVTNLKIGKSIKVGQLNF-EGLEMATSK 175 Query: 178 NITIATI 184 ++ + +I Sbjct: 176 DVVVCSI 182 >gi|169830288|ref|YP_001716270.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Desulforudis audaxviator MP104C] gi|226736307|sp|B1I196|RL25_DESAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169637132|gb|ACA58638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Desulforudis audaxviator MP104C] Length = 211 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R GKG L++NG IPA+IYG + + + + L +K ++ Sbjct: 4 VDLKARPRAGRGKGYRNRLKQNGLIPAVIYGKEVGSLLLEVETRAVQDIL-TKTGRNALI 62 Query: 66 TLDIG-----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + + I KD + P + H DF Q+S +T V ++ +PG Sbjct: 63 QLRVEPEKGRAKKYDAIIKDVHMHPYKNEFFHVDFHQISLKDELTTSVNLKLTG--SAPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG+L + +V + C NIPD I VD++ L IGD+IH+ D++ PE + ++T Sbjct: 121 VTAGGRLEQLIRQVEVSCLPRNIPDHIEVDVSGLGIGDAIHVSDLKAPEGVKFETDGDVT 180 Query: 181 IATIVAP 187 + T++AP Sbjct: 181 VVTLIAP 187 >gi|89100524|ref|ZP_01173385.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] gi|89084790|gb|EAR63930.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] Length = 211 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 3/184 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R + + LR G IP ++YGN + K I L+ D K + + + Sbjct: 2 STVLQAKERKEFRNSNLTQLRNEGNIPGVVYGNKIESKAIYLNGPDFIKTIR-ETGRNAV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +LD+ V+ DYQ DP+ + + H DF V +T V + + + G+K G Sbjct: 61 FSLDVEGTKHDVVLSDYQADPLKNEITHLDFRAVDMSQEITAEVRIELVG--DAAGVKDG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L HE+S+ N+IP S+ V++ DL++G+SI DI+ + + IA+I Sbjct: 119 GVLQQPVHELSVSAKPNDIPQSVEVNIADLQVGESITAADIKAGRGFTINTDDETVIASI 178 Query: 185 VAPI 188 +AP Sbjct: 179 LAPR 182 >gi|256824231|ref|YP_003148191.1| 50S ribosomal protein L25P [Kytococcus sedentarius DSM 20547] gi|256687624|gb|ACV05426.1| LSU ribosomal protein L25P [Kytococcus sedentarius DSM 20547] Length = 226 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 9/190 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K KL+ R GKG+AR R+ G IPA++YG+ P + L + L N Sbjct: 1 MANKTIKLTCTERTTFGKGAARQARREGGIPAVVYGHGEGPFHVILPGHEAFIALRHTN- 59 Query: 61 MTTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++TL G E V+ KD Q DP+ I+ H DF+ V V V + + E Sbjct: 60 --ALMTLTWGSGEDRLVLAKDVQRDPIKPIIEHVDFVIVDRNEKVDVDIAIHLDGEAGPE 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + ++V V++ P +IP+SITV + + G IH D+ LPE ++ Sbjct: 118 TV-----VSVPTSTVTVKAPVLDIPESITVSVEGAEAGTLIHAGDLELPEGVELVTDAEE 172 Query: 180 TIATIVAPIS 189 TI + IS Sbjct: 173 TIINVSEAIS 182 >gi|239981714|ref|ZP_04704238.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291453574|ref|ZP_06592964.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291356523|gb|EFE83425.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] Length = 196 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R+ ++P ++YG+ ++P I L ++ L + N Sbjct: 1 MSEVKISAETRSEFGKGAARRIRRESKVPGVVYGHGAEPAHIVLPGHELMMALKTSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++LD+G + VIPK Q D + L+H D L V G V V +PV + +PG Sbjct: 58 VLISLDLGGKSELVIPKAVQRDALKGHLVHIDLLTVKRGEKVQVEIPVVAEG-DLAPGA- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + A NIP+S+TV + L GDS+ +DI+LP+ S + + + Sbjct: 116 --NLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDIKLPKGVSLDVEDDTVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|295838328|ref|ZP_06825261.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] gi|197695879|gb|EDY42812.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] Length = 197 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++ + VIPK Q DP+ L H D L V+ G V V +PV + +PG Sbjct: 60 LAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVNRGEKVQVEIPVLAEG-DLAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S + + + + Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVSLAVEPDAVVIQV 175 Query: 185 V 185 + Sbjct: 176 L 176 >gi|86156549|ref|YP_463334.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter dehalogenans 2CP-C] gi|109893342|sp|Q2IM61|RL25_ANADE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85773060|gb|ABC79897.1| LSU ribosomal protein L25P [Anaeromyxobacter dehalogenans 2CP-C] Length = 240 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 2/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + T+ Sbjct: 3 ENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ +G Sbjct: 63 LELQVEGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVAEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + + Sbjct: 121 GILSVAAHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVVFV 180 Query: 185 VAP 187 P Sbjct: 181 AVP 183 >gi|189499938|ref|YP_001959408.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides BS1] gi|226736296|sp|B3EPZ5|RL25_CHLPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189495379|gb|ACE03927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium phaeobacteroides BS1] Length = 209 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + RD K +A+ LR G++PA++Y + I + + + K ++S Sbjct: 1 MESIVFNVEPRDCD-KNAAKKLRDQGKVPAVVYHKGEETIHICVDERSLKKLVHSSESHL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LT GKE K+ Q DPV+D +IHADF S G + + VP FI E ++PG+ Sbjct: 60 IDLTFPDGKEKRS-FLKEVQFDPVTDKIIHADFQFFSAGEVLEMDVPTTFIGEGEAPGVV 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EK-TSSMSQLNI 179 GG + V+ H + + +NIP IT+D++ +++G ++H+ +I + E +S + Sbjct: 119 AGGNVQVILHSLKVKAVPSNIPQHITIDVSGMELGQTMHIREIPVETYEGKFEIISDPDS 178 Query: 180 TIATIVAPI 188 ++ +IVAP Sbjct: 179 SVVSIVAPK 187 >gi|269792684|ref|YP_003317588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100319|gb|ACZ19306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 213 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFM 61 ++ ++ R+ +GKG+ R LR G +PA++YG KP ++ +++ K + + Sbjct: 2 KERVQVQFKSREGLGKGACRKLRSEGMVPAVVYGPGYQSGKPGFVNEREVYKVCGTDTWE 61 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT++ L++ + ++ Q P++ ++H DFLQ+ + V V VPV +N+ G+ Sbjct: 62 TTVIELNVDGNPEMALIREIQRHPLTRDIVHLDFLQMKKDHKVRVQVPVHLMNKGICVGV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG L HE+++ +IP+ + +D+ L++G + + D+ L ++ + I Sbjct: 122 KQGGVLEQHHHEITVEVFPEDIPERVDIDVKGLELGAEVRISDLNLGDRIHWALPTDTVI 181 Query: 182 ATIVAP 187 + +P Sbjct: 182 VAVRSP 187 >gi|242371669|ref|ZP_04817243.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] gi|242350618|gb|EES42219.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] Length = 218 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+V Sbjct: 121 VEQPLFDLEVTATPENIPESIEVDISELQINDSFSVADVKISGDFTIENDPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|189184105|ref|YP_001937890.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Ikeda] gi|226736344|sp|B3CTF9|RL25_ORITI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189180876|dbj|BAG40656.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +R G SAR LR+ G++P +IY P + K+++K F + Sbjct: 2 NEMLTLVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAKLYRKPFFSS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV-TVHVPVRFINENKSPGI 121 T++ L + + V+PK QL PV++ + H DF+ V + + V VP+ F ++KS GI Sbjct: 62 TVIQLQVDDQRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQKVKVPISFEGKDKSLGI 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNIT 180 K+GG LN+V V LLCP + IP I D+ ++ +G SI + + LPE + + + + Sbjct: 122 KRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPEGCNLVKRTTDYV 181 Query: 181 IATIVAPIS 189 IA+++ S Sbjct: 182 IASVIGKSS 190 >gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] Length = 189 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P I++G +P PI + ++ KRL + F +T+ L + E V VI +D Q D V Sbjct: 1 MVPGIVFGGDKEPLPIQIPFNELFKRLKAGRFKSTLWNLKVDGHEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ + + + +PV FINE +PGIK+GG L VV EV LLC A +IP+ I Sbjct: 61 DLPTHLDLMRLRRTTKIALFIPVEFINEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVDL L+I D + + + LP+ T + IA I AP Sbjct: 121 TVDLAGLEINDVVTISSVDLPDGTKPTIDRDFVIANISAPTG 162 >gi|288921322|ref|ZP_06415604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] gi|288347296|gb|EFC81591.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] Length = 209 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 5/180 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 1 MSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTL++ +PK+ Q P+ H D + V+ G VTV V + I + + Sbjct: 61 VLLTLELSGGTELALPKEVQRHPIRGSYEHVDLVLVNRGERVTVEVALILIGDAHPDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++ +++ A ++P +I VD+ L+ G I + LP + + I Sbjct: 120 ----VDQQVTALAVKADATSLPSTIEVDITGLEPGHGIAASQLELPRGVELEADAELVIV 175 >gi|302519766|ref|ZP_07272108.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] gi|318061239|ref|ZP_07979960.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actG] gi|318075754|ref|ZP_07983086.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actF] gi|302428661|gb|EFL00477.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] Length = 197 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGAEPVHVTVPGHELMMALKTSN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++ + VIPK Q DP+ L H D L V G V V +PV E +PG Sbjct: 60 LAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPVLAEGE-LAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S + + + + Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVSLAVEPDAVVIQV 175 Query: 185 V 185 + Sbjct: 176 L 176 >gi|163753734|ref|ZP_02160857.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] gi|161325948|gb|EDP97274.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] Length = 199 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG +P + SK +Y+ N T Sbjct: 1 MKSITINGSQRESVGKVATKALRNAGKVPCVLYGGD-NPLHFSAEELSFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ + I +D Q PV+D ++H DF ++ + VT+ +PV+ + KSPG+ Sbjct: 60 VVIALE-DGSTHNAILQDIQFHPVTDKILHIDFYRLFDDKEVTMDIPVKVVG--KSPGVM 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD I D+++LKIG+ +++ ++ E + N + Sbjct: 117 NGGVLRLNKRKLRVKAIPANLPDFIEADISELKIGNKLYVTALQN-ENYKLLHADNTVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|296131718|ref|YP_003638965.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola sp. JR] gi|296030296|gb|ADG81064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola potens JR] Length = 217 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 5/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL R + LR +G+IPA+IYG K + + +++ L + I Sbjct: 3 EVKLRVQPRPNKTRSYKHWLRNHGKIPAVIYGKDLPNKLVEVDVRNLESILRNGAGKNAI 62 Query: 65 LTLDIGK---ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L + + + V+ KD Q DPV L+H D ++S + VP+ E + GI Sbjct: 63 INLTVEEAKPHKLTVMIKDLQRDPVKGDLMHVDLQKISLTDKIHTTVPIHLTGE--AEGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C NIPD I+VD++ L IGDS+ + DI + + + I Sbjct: 121 KKGGILQSGLRELEIECVPANIPDHISVDISGLDIGDSLTVADIAGQDGFTVKNDPATVI 180 Query: 182 ATIVAPISGS 191 +IV+P Sbjct: 181 VSIVSPRRAE 190 >gi|223044426|ref|ZP_03614459.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] gi|222442215|gb|EEE48327.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] Length = 219 Score = 187 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+V Sbjct: 121 VEQPLFDLEVSATPENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|332798112|ref|YP_004459611.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] gi|332695847|gb|AEE90304.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] Length = 210 Score = 187 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 104/181 (57%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A +R K + L++ G++PA++YG + I++ K++S+ L S+ ++++ L Sbjct: 6 LTAAVRQAA-KSENKKLKREGKVPAVVYGKGYETTSISVDDKELSRILKSR-GESSLINL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ E V+ K+ Q + + + + H DF +VS V ++P+ + G+K+GG L Sbjct: 64 ELNGEAFPVLIKEVQRNVLKNSMEHVDFFKVSMDEEVEYNLPIVLKG--DAKGVKEGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV++ N++ D+I +D++D+ IGD++ + D+++ +K + + + I +++AP Sbjct: 122 QHQKREVAVKSLPNDMLDNIEIDISDMDIGDTLTVADLKIGDKNTVLDDPDEVIVSVLAP 181 Query: 188 I 188 Sbjct: 182 R 182 >gi|320010340|gb|ADW05190.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces flavogriseus ATCC 33331] Length = 195 Score = 187 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A +R + GKG+AR R+ +P ++YG+ ++P I L ++ L + N + Sbjct: 3 EIKLDATVRTEFGKGAARRTRRANLVPGVVYGHGAEPVHINLPGHELLLALRTAN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q + + + H D L V G V V + V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRNALKGNIEHVDLLTVKRGEKVNVEIAVHAEG-DLAPGA--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+S+TV + L GDSI +DI LP+ + + + Sbjct: 116 NLLEYVQNTLLVEAEATHIPESVTVSVAGLDAGDSIAAKDITLPKGAVLAGDEDAIVLQV 175 Query: 185 V 185 V Sbjct: 176 V 176 >gi|332982255|ref|YP_004463696.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] gi|332699933|gb|AEE96874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] Length = 201 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + L+ R + G G+A LR++G IP ++YG P + + K++ + + SK+ Sbjct: 3 ERVALAIEKRQETGSGAAARLRRSGMIPGVVYGKSIAPINVKVPVKELREII-SKHGRNA 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L L+I + + + KD Q D + H DF + + VP+R E + Sbjct: 62 VLNLNIEGQTLAAVIKDLQHDLMGTQYEHVDFQHILMNEVIKTKVPIRLQGEGLIE--SK 119 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + E+ + C +++P+ I +D++D+++G S+ + DI +PE +S + + Sbjct: 120 GGLVMLQLDELDVECLPDSLPEVIEIDVSDMEVGQSLKVADINVPENVRIISNPDEIVLA 179 Query: 184 IVAPISG 190 ++ SG Sbjct: 180 VMETKSG 186 >gi|311743169|ref|ZP_07716977.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] gi|311313849|gb|EFQ83758.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] Length = 228 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 9/186 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K++A R + GKG+AR +R+ Q+PA++YG+ SDP + L D+ L + N + Sbjct: 9 EIKIAAQTRTEFGKGAARRIRRADQVPAVLYGHGSDPVHVTLPGHDLMLALKNSN---AL 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++D+ VIPK Q DP+ + HAD L V +G VTV +P+ + + + Sbjct: 66 LSIDLDSGSHLVIPKQVQRDPLKGFIEHADLLIVKKGEKVTVDIPLTLVGQAGPDTL--- 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + VS+ A +IP+ I V + L G+ I +D+ LP+ ++ + + I Sbjct: 123 --VVTENSTVSIEAEATHIPNEIEVSIEGLAAGEQILAKDLVLPKGSTIAGDEDQLMINI 180 Query: 185 V-APIS 189 V AP + Sbjct: 181 VNAPST 186 >gi|242280388|ref|YP_002992517.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] gi|242123282|gb|ACS80978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] Length = 196 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 4/186 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K A +R K GK + R LR G +P + Y + ++++ + K +Y K Sbjct: 1 MSEK-VTFKAELRTKTGKSANRQLRNQGMVPVVFYSQDGENLVLSVNENEFVK-MYRKVG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + +L++ + + Q+DPV H DFL VS+ T+ V VPV + E K+PG Sbjct: 59 TTRVFSLEVDGKTYDTLIWKVQMDPVRPRPNHIDFLGVSKDRTLKVDVPV--VTEGKAPG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG++ + ++++ C A +P I V+++ + +GD++ + +I L E S + N Sbjct: 117 VKLGGRMAIYRPKLTVACTAATLPAEIVVNIDSMNVGDTVFVNEIDLGEGASVVFDNNFA 176 Query: 181 IATIVA 186 + A Sbjct: 177 LVRCAA 182 >gi|85859731|ref|YP_461933.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophus aciditrophicus SB] gi|109893400|sp|Q2LUK6|RL25_SYNAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85722822|gb|ABC77765.1| LSU ribosomal protein L25P [Syntrophus aciditrophicus SB] Length = 200 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 9/190 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ +E L A +R + GK AR +R+ G IPA++YG +DP ++++A D+ L Sbjct: 1 MEARE--LKANVRKESGKEQARRMRREGLIPAVLYGPGTDPVSLSVNASDLKTALKGAE- 57 Query: 61 MTTILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ L I + + ++ Q++P+++ HADF + T VP+ F E Sbjct: 58 ENVLIKLIIDDSGRLMEKNSLIRELQIEPLTNNFFHADFYALRMDQESTFDVPIHF--EG 115 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + GI++GG+L + E+ + C + +PD ITVD++ L +GD++ + D+ L E Sbjct: 116 QPVGIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDLSLSESIRCFDS 175 Query: 177 LNITIATIVA 186 +I + TI A Sbjct: 176 KDIVLVTIAA 185 >gi|84497834|ref|ZP_00996631.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] gi|84381334|gb|EAP97217.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] Length = 228 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 8/189 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL A R K GKG+AR +R++ +IPA++YG+ S+P I L D L + N Sbjct: 1 MANDTIKLQAQARTKFGKGAARQIRRDHKIPAVMYGHGSEPVHITLMGHDAMMALKNPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LT+ + + KD Q DP+ ++ H D + V +G VTV V V E Sbjct: 60 --ALLTIVLDGAEQLALAKDVQRDPIKPVIEHIDLVIVRKGEKVTVDVNVHLEGEAAPET 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +++ + L A NIP+S+TV + L+ G I I LPE + ++ Sbjct: 118 V-----VSLDNSSIQLEVEATNIPESVTVSVEGLEAGTQILAGAIELPEGATLITDAEAL 172 Query: 181 IATIVAPIS 189 + + IS Sbjct: 173 VVNVTQQIS 181 >gi|239930784|ref|ZP_04687737.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces ghanaensis ATCC 14672] Length = 193 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 6/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N + + Sbjct: 3 DVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNVLIEL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L GKE IPK Q DP+ L H D L+V G V V +PV+ E +PG G Sbjct: 63 LI--DGKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGE-LAPG---G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + A IPD +TV + L+ G S+ +DI LPE + + + Sbjct: 117 NLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPEGVKLAVDEDAVVLQV 176 Query: 185 V 185 + Sbjct: 177 L 177 >gi|314932723|ref|ZP_07840093.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] gi|313654553|gb|EFS18305.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] Length = 219 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 8/184 (4%) Query: 8 LSAVMRDKVGK---GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R GK + LR +G++PA++YG + + + + K + + + Sbjct: 4 LKSIIR--QGKQTCSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+G Sbjct: 61 IDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+ Sbjct: 119 GVVEQPLFDLEVSATPENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIVTV 178 Query: 185 VAPI 188 V P Sbjct: 179 VPPT 182 >gi|325265863|ref|ZP_08132549.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] gi|324982501|gb|EGC18127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] Length = 190 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R G G++R LR ++PA++YG + K IA+ K++ L + F T +L L Sbjct: 6 IQATLRSAQGTGASRRLRNENKVPAVVYGLG-ESKAIAVDHKEMYFALQKEAFFTQVLKL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 I + VI +DYQ+ PV + H DF + V + +PV +N KS +K Q G+ Sbjct: 65 SIDGKEQDVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRMKLPVHIVNAEKSHAVKLQSGR 124 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V +L NIP ++ +D + GD +H+ DI PE S++ N+ +AT Sbjct: 125 VSLLMTVVDVLVNPKNIPAALELDCEKVVAGDILHLSDITYPEGVQSIALKRNSNLAVAT 184 Query: 184 IVA 186 + Sbjct: 185 VTG 187 >gi|149182810|ref|ZP_01861272.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] gi|148849477|gb|EDL63665.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] Length = 217 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R + LR G IPA++YG ++ PIA+ + + K + + I+ Sbjct: 3 VELKANNRTGSKRSDLTNLRHQGSIPAVVYGYKTENTPIAIDSIEFIKTMR-EAGRNGII 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L+I +V+ DYQ D + D +IHADFL V+ S + V + + E S G+K GG Sbjct: 62 SLNIDGNKQNVVLSDYQQDHIKDAVIHADFLAVNMSSEMDADVRIELVGE--SAGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H+VS+ ++IPDS+ VD++ L++G++I + DI+ + ++ TIA+++ Sbjct: 120 VLQQPLHDVSVTAKPSDIPDSVQVDISGLQVGETITVGDIKGNYSFTINTEDERTIASVL 179 Query: 186 API 188 AP Sbjct: 180 APR 182 >gi|332671546|ref|YP_004454554.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] gi|332340584|gb|AEE47167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] Length = 207 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 10/186 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL A R + GKG+AR LR+ Q+PA++YG+ SDP ++L + + N Sbjct: 1 MSEVKLVATARTEFGKGAARRLRRAHQVPAVLYGHGSDPLHVSLPGHETMLAVKHAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ + I KD Q++PV +++ H D L V +G V V VPV E+ Sbjct: 58 ALFEIELEGKTTLAIAKDVQIEPVRNVIEHVDLLIVKKGEKVAVEVPVHVQGESAP---- 113 Query: 123 QGGKLNVVCHE-VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L+VV + +SL A ++P+++ VD+ L+ G +H D+ LP+ + ++ + Sbjct: 114 --GTLHVVETQALSLEAEATHLPENVVVDIAGLEAGAIVHAGDVTLPKGATLLTDAETIV 171 Query: 182 ATIVAP 187 T+ P Sbjct: 172 VTVSLP 177 >gi|333026424|ref|ZP_08454488.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] gi|332746276|gb|EGJ76717.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] Length = 197 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N + Sbjct: 3 EVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++ + VIPK Q DP+ L H D L V G V V +PV E +PG Sbjct: 60 LAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPVLAEGE-LAPG---Q 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+ +TV + L+ G SI +DI LP+ S + + + + Sbjct: 116 FLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIELPKGVSLAVEPDAVVIQV 175 Query: 185 V 185 + Sbjct: 176 L 176 >gi|239825631|ref|YP_002948255.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. WCH70] gi|259646689|sp|C5D373|RL25_GEOSW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239805924|gb|ACS22989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. WCH70] Length = 210 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IP I+YG D + I +S + K + + +++ Sbjct: 3 VVLEAKERPDKKHSTLRRIRLQGNIPGILYGKNIDNQMIFVSGAALEKTIR-EGGRHSLM 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL IG++ V+ ++ Q DP+ ++HADF V + V + V VR I E + G K GG Sbjct: 62 TLKIGEKDYSVLLREIQRDPLRGNILHADFQAVDMSTEVDIDVDVRLIGE--AAGEKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H++++ NIP SI +D++ L+IGD++ + DI K + + IATI+ Sbjct: 120 VLQQNLHQLTIRVLPANIPPSIDIDISHLQIGDTVTVGDINTGGKYEIIDDPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|187735963|ref|YP_001878075.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] gi|226736273|sp|B2UL21|RL25_AKKM8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187426015|gb|ACD05294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] Length = 201 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 105/188 (55%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R G G+ + LR G +P ++YG D I + A++ ++ L S Sbjct: 1 MAT-SHSLKAETRA-CGSGNLKQLRSQGLVPGVVYGPGFDNVNIQVDAREFARMLASAVS 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LDI ++V V+ K+ Q +P+++ +H DF V++ + + VPV I E S G Sbjct: 59 EHILVALDINGKIVKVLLKEVQHNPITNACLHVDFQAVTDTTVIHSIVPV--ILEGDSAG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L+ HE++++C ++P++IT D++ LK+G+S+ + D++LP ++ ++ Sbjct: 117 VALGGVLDQTIHELAIICQVKDLPEAITADISGLKLGESLRITDLKLPSGVTTELAGDVI 176 Query: 181 IATIVAPI 188 +A + AP Sbjct: 177 VAIVEAPR 184 >gi|258591287|emb|CBE67584.1| 50S ribosomal protein L25 (General stress protein CTC) [NC10 bacterium 'Dutch sediment'] Length = 220 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L +R +VGKG+A+ LR+ IPA++YG S P + ++ ++ K L S Sbjct: 1 MEELRLKGQVRTQVGKGAAKKLRRQRLIPAVVYGGTSGPTAVTINPFEMMKLLGSGAGEN 60 Query: 63 TILTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++L + E VI K Q DPV +HADFL+VS + V +PVR + E + Sbjct: 61 VLISLAMDGENEQSRTVILKALQRDPVRGGPLHADFLEVSMQRKIKVQIPVRLVGE--AI 118 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K +GG L EVS+ C IP I VD++ L +G IH+ ++ + Sbjct: 119 GVKLKGGLLEQHLREVSVECLPGAIPSHIQVDISHLDLGHGIHVRELTAGGDIKVLEDPA 178 Query: 179 ITIATIVA 186 + T++ Sbjct: 179 RPVVTVLV 186 >gi|147676447|ref|YP_001210662.1| 50S ribosomal protein L25/general stress protein Ctc [Pelotomaculum thermopropionicum SI] gi|226736346|sp|A5D632|RL25_PELTS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146272544|dbj|BAF58293.1| ribosomal protein L25 [Pelotomaculum thermopropionicum SI] Length = 209 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R + + LR+ G IPA++YG IA+ A ++ K L + Sbjct: 2 TAELEAQARTEKTRSFTHSLREKGMIPAVVYGKNVGSLSIAVDAGELQKIL-EGAGSNAL 60 Query: 65 LTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + I + +V+ K+ Q DPV LIHADF QVS V VPV + G Sbjct: 61 IRMKIKENGKIRKHNVLVKEVQRDPVRRELIHADFHQVSLKDRVHATVPVHLTG--SAAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +GG L + V + C A+ IP++ITVD++ L+IGD+I + D+ LP ++ Sbjct: 119 TVEGGVLTPLLRRVEMECLASEIPEAITVDVSGLRIGDTITVADLPLPPGVRALEDPEAP 178 Query: 181 IATIVA 186 + T+ A Sbjct: 179 VVTVTA 184 >gi|144898693|emb|CAM75557.1| 50S ribosomal protein L25 [Magnetospirillum gryphiswaldense MSR-1] Length = 200 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 2/183 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +RD+ GKG+AR R+ G++P +IYG DP IA+ + I L+ F T + + Sbjct: 7 IVAELRDRAGKGAARATRREGKVPGVIYGGKQDPICIAIDPRVIWAELHKPGFKTRLFDV 66 Query: 68 DIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D+ + +D Q PVSD +H D ++VS + V V VPV IN +KSPG+K GG Sbjct: 67 DLAAGGKHRCLCRDVQFHPVSDQPVHIDLMRVSADAVVHVKVPVHVINADKSPGVKAGGV 126 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 +++ HEV + C + IP I +DL +G S+H+ D+ LP + + TIV Sbjct: 127 VSLELHEVEVTCAPDLIPSEIVIDLAGKDVGYSVHVNDLGLPAGVTPYHVGAKAGVLTIV 186 Query: 186 API 188 P Sbjct: 187 PPT 189 >gi|269796295|ref|YP_003315750.1| 50S ribosomal protein L25P [Sanguibacter keddieii DSM 10542] gi|269098480|gb|ACZ22916.1| LSU ribosomal protein L25P [Sanguibacter keddieii DSM 10542] Length = 206 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 8/181 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R + GKG+AR R+N QIPA++YG+ +DP +AL L N + Sbjct: 6 KLVAEARTEFGKGAARRTRRNNQIPAVLYGHGTDPVHVALPGHQTMLALKQSN---ALFE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + KD Q DPV +++ H D L V +G V V V V E G Sbjct: 63 IELDGTTQFALAKDVQRDPVKNVIEHVDLLIVKKGEKVEVEVNVHVTGEPVP-----GTI 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V V L A N+P+ I D+ + G I D+ LPE ++ ++ + + I Sbjct: 118 HIVQSQTVVLEALATNLPEWIEADVTGREAGTVITAGDLVLPEGSALITDADSDVVLISV 177 Query: 187 P 187 P Sbjct: 178 P 178 >gi|114767366|ref|ZP_01446171.1| ribosomal protein L25 [Pelagibaca bermudensis HTCC2601] gi|114540537|gb|EAU43613.1| ribosomal protein L25 [Roseovarius sp. HTCC2601] Length = 178 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P I++G ++P I L ++ KRL + F +T+ L + + V VI +D Q D V Sbjct: 1 MVPGIVFGGDAEPLAIQLPFNELLKRLKAGRFKSTLFNLKVDGHDDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S + + + V FINE +PG+K+GG L +V EV L A +IPD I Sbjct: 61 DLPTHFDLMRLRRTSRINLFIHVDFINEETAPGLKKGGVLTIVRQEVELEVLAGDIPDHI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVDL D +IGD IH+ D+ LP+ + IA I AP Sbjct: 121 TVDLADKQIGDVIHISDVTLPDGAKPTIDRDFVIANISAPRG 162 >gi|295132327|ref|YP_003583003.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] gi|294980342|gb|ADF50807.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] Length = 213 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 4/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR GQ+P ++YG ++P +Y+ + T Sbjct: 1 MKSITIKGSKRESVGKKATKALRNAGQVPCVLYGGDAEPLHFTTEEISFQHLVYTPDVHT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L E + I +D Q PV+D ++H DF ++ + +T+ +P+ + + G+K Sbjct: 61 VVIELK-SGEKYNAILQDIQFHPVTDNILHVDFYEIFDNKPITMEIPIHTVG--VARGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + +PD I D+ LKIG +++ + E N I Sbjct: 118 NGGVLRYNLRRLKVRGLPGVLPDYIEADVTKLKIGQKLYVTAVE-SEDYKIQHPDNTVIC 176 Query: 183 TI 184 + Sbjct: 177 QV 178 >gi|220912060|ref|YP_002487369.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] gi|219858938|gb|ACL39280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] Length = 204 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + + N Sbjct: 1 MSEQKLAAELRTEFGKGYARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI E + KD Q DP+ I+ H D L V +G VTV V V E+ +PG Sbjct: 58 ALLSLDINGEGHLALVKDIQRDPIKQIIEHIDLLTVRKGEKVTVDVAVHVAGES-APGTV 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 N+ VSL A ++P ++ V + G+ IH D+ LP+ ++ + Sbjct: 117 H----NLELTTVSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLPKGVVLLTDAEALVV 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|284033576|ref|YP_003383507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] gi|283812869|gb|ADB34708.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] Length = 214 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R + GKG+AR +R++ ++PA++YG+ +DP I L D L + N + + Sbjct: 3 EVKIQAESRTEFGKGAARRIRRDNKVPAVLYGHGTDPVHITLPGHDTMLALKTANALL-L 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + ++ G E + +PK Q DP+ + + H D + V G V V + V + S + Sbjct: 62 IEVE-GSESLLALPKQVQRDPIKNFIEHVDLVIVKRGEKVQVDIAVHLEGDAASETL--- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + + A +IPD +TV + L G IH D++LP T+ + + I + Sbjct: 118 --VVLENASILVEAEATHIPDGVTVSIEGLDAGAQIHASDLQLPAGTTLAVEPDTLIVNV 175 Query: 185 VAPISGS 191 A + Sbjct: 176 TAAATAE 182 >gi|70727509|ref|YP_254425.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus haemolyticus JCSC1435] gi|82581584|sp|Q4L3F8|RL25_STAHJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68448235|dbj|BAE05819.1| 50S ribosomal protein L25 [Staphylococcus haemolyticus JCSC1435] Length = 221 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVHLVGE--AAGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + ++ + NIP+SI VD+ +L++ DS + DI++ + + ++ T+V Sbjct: 121 VEQPLFDLQVTATPENIPESIEVDITELEVNDSYSVSDIKVSGDFTIENDPEESVVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|326796206|ref|YP_004314026.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] gi|326546970|gb|ADZ92190.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] Length = 192 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 99/186 (53%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + GKG++R LRK G +PA+IYG ++ + + ++ K + + F+T++ Sbjct: 2 TVIIEAAPRSEEGKGASRRLRKQGLVPAVIYGGETEAQSVTFKNNELVKAVANVAFLTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + + + V+ K Q P + ++H D L+++E T+ +P+ F+N KS G+K Q Sbjct: 62 VEVSVDGAAQKVLVKSLQRHPSTGDVMHVDLLRIAEDKTIATRIPLEFVNAEKSEGVKAQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG+L+V + C ++P S+ VD D ++G H+ D +LPE ++ N Sbjct: 122 GGRLSVEAKLAEVRCLPKDLPASLIVDAIDGQLGQIFHLSDAQLPEGVELVALLKGGDHN 181 Query: 179 ITIATI 184 IA I Sbjct: 182 QPIARI 187 >gi|332519193|ref|ZP_08395660.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] gi|332045041|gb|EGI81234.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] Length = 210 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK S + LR GQ+P ++YG + + SK +Y+ N T Sbjct: 1 MKSITINGSQRESVGKKSTKALRNAGQVPCVLYGGDKA-VHFSAAELAFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G + + I +D Q PV+D ++H DF QV E +T+ +PVR+I G++ Sbjct: 60 VVIELE-GGDTYNAILQDIQFHPVTDRILHIDFYQVFEDKEITMDIPVRYIG--NPRGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD I D+ +LKIG+ +++ + E + M N + Sbjct: 117 NGGVLRKNKRSLRVKALPGNLPDYIDADIENLKIGNKLYITKLE-SEDYTFMHPDNTVVC 175 Query: 183 TI 184 + Sbjct: 176 LV 177 >gi|242241586|ref|ZP_04796031.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] gi|242234967|gb|EES37278.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] Length = 223 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 99/189 (52%), Gaps = 4/189 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M+ + L +++R K + + LR +G++PA++YG + + + + K + + Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EV 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + Sbjct: 60 GRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AV 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 118 GAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENDPED 177 Query: 180 TIATIVAPI 188 +I T+V P Sbjct: 178 SIVTVVPPT 186 >gi|325962653|ref|YP_004240559.1| 50S ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] gi|323468740|gb|ADX72425.1| LSU ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] Length = 206 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ +DP + L AK + + + N Sbjct: 1 MSEQKLAAEVRTEFGKGYARRARMANLIPAVIYGHGADPIHVTLPAKATTLAVRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI E + KD Q DP+ I+ H D L V +G VTV VPV E +PG Sbjct: 58 ALLSLDINGEGHLALVKDVQRDPIKQIIEHIDLLTVRQGEKVTVDVPVHVSGE-TAPGTV 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 N+ VSL A ++P+S+ V + G+ IH D+ LP+ + ++ + Sbjct: 117 H----NLELTVVSLEAEATHLPESVEVSIEGRAAGEHIHASDLVLPKGSVLLTDAEALVI 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|238062583|ref|ZP_04607292.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] gi|237884394|gb|EEP73222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] Length = 230 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 7/178 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G +PA++YG+ PK IAL A++ + + K Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGMVPAVLYGHGEKPKHIALPAREFAAAIR-KGGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +++ V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 60 QLFAIEVSDGTQVLALPKAIQRDPIKDSFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + +S+ A +PD + + L+ G + D+ LP + + Sbjct: 120 -----IVHDHDTLSVTADATKVPDHLEASIEGLEAGTQVTAADVELPSGVELAADPEL 172 >gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisA53] gi|122297068|sp|Q07RP7|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53] Length = 234 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 73/184 (39%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R VGKG+AR R+ G++PA+IYG+ P I+L +++ R+ + F+TT++ Sbjct: 6 ELKATARPSVGKGAARAERRAGRVPAVIYGDNKPPVTISLEDRELRLRILAGRFLTTVVD 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ VIP+D+ LDPV D +H DFL++ EG+T+ V VP+ N +PG+K+GG Sbjct: 66 LDLDGTKHRVIPRDFHLDPVRDFPVHVDFLRLGEGATIRVSVPLHLKNSETAPGVKRGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATIV 185 +N+V H V L A++IP I D+ L IG S+H+ D+ LP+ + ++ ++T+ TIV Sbjct: 126 VNIVTHTVDLEAEADSIPQFIEADIGTLDIGTSLHLSDVVLPKGVKLVAAREDVTLVTIV 185 Query: 186 APIS 189 P Sbjct: 186 PPSG 189 >gi|313821706|gb|EFS59420.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA1] gi|313824403|gb|EFS62117.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA2] gi|314926811|gb|EFS90642.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA3] Length = 205 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATV 176 Query: 185 VAPIS 189 P + Sbjct: 177 AFPET 181 >gi|289424136|ref|ZP_06425919.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289428386|ref|ZP_06430072.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|295130101|ref|YP_003580764.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|68053104|sp|Q6AAC8|RL25_PROAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|289154833|gb|EFD03515.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289158358|gb|EFD06575.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|291376922|gb|ADE00777.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|313765348|gb|EFS36712.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA1] gi|313772663|gb|EFS38629.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL074PA1] gi|313806689|gb|EFS45196.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA2] gi|313810886|gb|EFS48600.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA1] gi|313814603|gb|EFS52317.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA1] gi|313815245|gb|EFS52959.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA1] gi|313826760|gb|EFS64474.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA1] gi|313828550|gb|EFS66264.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA2] gi|313832005|gb|EFS69719.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL007PA1] gi|313834455|gb|EFS72169.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL056PA1] gi|313840312|gb|EFS78026.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL086PA1] gi|314916009|gb|EFS79840.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA4] gi|314916914|gb|EFS80745.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA1] gi|314921555|gb|EFS85386.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA3] gi|314931121|gb|EFS94952.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL067PA1] gi|314954822|gb|EFS99228.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA1] gi|314958988|gb|EFT03090.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA1] gi|314969389|gb|EFT13487.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA1] gi|314974457|gb|EFT18552.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA1] gi|314977353|gb|EFT21448.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL045PA1] gi|314980491|gb|EFT24585.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA2] gi|314985548|gb|EFT29640.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA1] gi|314987504|gb|EFT31595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA2] gi|314989030|gb|EFT33121.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA3] gi|315081845|gb|EFT53821.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL078PA1] gi|315082662|gb|EFT54638.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA2] gi|315087619|gb|EFT59595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA1] gi|315097621|gb|EFT69597.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL038PA1] gi|315099745|gb|EFT71721.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA2] gi|315101950|gb|EFT73926.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA1] gi|315106543|gb|EFT78519.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA1] gi|315110331|gb|EFT82307.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA2] gi|327331620|gb|EGE73359.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA2] gi|327333603|gb|EGE75323.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA3] gi|327335128|gb|EGE76839.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL097PA1] gi|327445369|gb|EGE92023.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA2] gi|327446983|gb|EGE93637.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA1] gi|327449980|gb|EGE96634.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA2] gi|327454824|gb|EGF01479.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA3] gi|327455681|gb|EGF02336.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA2] gi|328755880|gb|EGF69496.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA1] gi|328756663|gb|EGF70279.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA2] gi|328758616|gb|EGF72232.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL020PA1] gi|328761611|gb|EGF75127.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL099PA1] gi|332674942|gb|AEE71758.1| 50S ribosomal protein L25 [Propionibacterium acnes 266] Length = 205 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATV 176 Query: 185 VAPIS 189 P + Sbjct: 177 AFPET 181 >gi|86130926|ref|ZP_01049525.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] gi|85818337|gb|EAQ39497.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] Length = 208 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG +P + +Y+ + T Sbjct: 1 MKSVSIQGSKRESVGKKATKALRNAGLVPCVVYGGD-EPIHFSAPELAFKNLVYTPDAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ V I +D Q PV+D ++H DF Q+ EG VT+++PV F S G++ Sbjct: 60 --VEIELDGVTVQAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFTG--NSKGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + ++PD + D+ +LKIG+ +++ ++ E + M N + Sbjct: 116 NGGVLRKTNRVLRVKALPKDLPDFLEADITNLKIGNKLYIGELPQ-ENITIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|307566372|ref|ZP_07628811.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] gi|307344949|gb|EFN90347.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] Length = 196 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-----KPIALSAKDISKRLYS 57 KE KLS R+ +GK ++RL+RK G +P +YG + + ++ K +Y+ Sbjct: 1 MKEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGLPVAVSFSSPMSELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 N + L I E + KD Q P +D L+H DF +V+E + + VPV+ Sbjct: 61 PNIYG--VELTIDGEKHLAVMKDLQFHPTTDALLHVDFYEVTEEKPIVMGVPVKLSG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG+LN+ ++++ P N +P+++ +D+ +L++G +I + D+ E ++ Sbjct: 117 AQGVRDGGRLNMSIRKINVKAPFNKMPETLNIDVTNLQLGKAIKVGDLSF-EGLELVTSK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|281423251|ref|ZP_06254164.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|299140506|ref|ZP_07033644.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] gi|281402587|gb|EFB33418.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|298577472|gb|EFI49340.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] Length = 204 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 96/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 KE +S R +GK +++ LRK G IP +YG + +S ++ K +Y Sbjct: 1 MKEINVSGQKRTDLGKKASKELRKQGFIPCNLYGEKKDADGRPEAHAFTVSFCELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I E I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 61 TPHIY--VINLNIDGEHHTAILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLEITTS 175 Query: 177 LNITIATI 184 ++ + ++ Sbjct: 176 KDVVVCSV 183 >gi|314937292|ref|ZP_07844634.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] gi|313654588|gb|EFS18338.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] Length = 221 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ T+V Sbjct: 121 VEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|228476234|ref|ZP_04060937.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] gi|228269719|gb|EEK11218.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] Length = 218 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ T+V Sbjct: 121 VEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|325473900|gb|EGC77088.1| 50S ribosomal protein L25 [Treponema denticola F0402] Length = 211 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+A R GK +A +R+ G+IPA++Y PI + ++ K L+ + Sbjct: 1 MEQRLLNANERSTYGKNAAVKMRRAGRIPAVMYDRHGKSVPIDVDEREFMK-LFKLVTES 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TL+ + V KD+Q D VSD + H DF +V G T+ V +R E G++ Sbjct: 60 TIVTLNAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL--EGSPEGVR 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A Sbjct: 118 HGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVA 177 Query: 183 TI 184 I Sbjct: 178 AI 179 >gi|297626907|ref|YP_003688670.1| ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922672|emb|CBL57249.1| Ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 219 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 9/186 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L+A R++ GKG+AR +R+ +IPA++YG+ +DP + L L + N + Sbjct: 3 EIELNAEPRNEFGKGAARRIRREDKIPAVLYGHGTDPVHLTLPGHQTLLALRTAN---AL 59 Query: 65 LTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + + E + +PK Q DP+ + H D L+V G VTV VP+ F+ I Sbjct: 60 LNIHVEGDEDLLALPKQVQRDPIKGFIKHVDLLRVRRGEKVTVEVPLEFVGVASPEAI-- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 +N ++++ IP+ I ++ +++GD + I LP I + Sbjct: 118 ---INEERTQLAIQAEITAIPNRIEASIDGMEVGDQLLAGQITLPAGAELEDDPETLILS 174 Query: 184 IVAPIS 189 VA IS Sbjct: 175 AVAQIS 180 >gi|152965021|ref|YP_001360805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] gi|151359538|gb|ABS02541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] Length = 209 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 8/180 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+A +R GKG+AR +R+ +IPA++YG+ P + L + L + N + Sbjct: 3 ETKLTAEVRTSFGKGAARTIRRASKIPAVVYGHGEAPVHVTLPGHETMIALRNSN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +D+ V+PKD Q DP+ + H D L V G VTV VP+ + + Sbjct: 60 LDIDVDGTSHLVLPKDVQRDPIKGFIEHVDLLVVRRGEKVTVDVPLHVEGDAAPETV--- 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + +S+ A IP ++TV + L G + D+ LPE T+ + I Sbjct: 117 --VQQELNTLSVEADAAAIPTAVTVSVEGLTAGTHVAASDVTLPEGTTLAGDPEQLVVVI 174 >gi|269219243|ref|ZP_06163097.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] gi|269211390|gb|EEZ77730.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] Length = 200 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ R GKG++R LR++G+ PA++YG+ SDP I+ + +I L +K ILT Sbjct: 4 KIQVDRRKSFGKGASRQLRRDGRTPAVVYGHGSDPVHISFDSHEIF--LATKGQANPILT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + V+ K+ Q +P++ I+ H D L+V +G V V VPV E+ PG + Sbjct: 62 IELEGKEQLVLVKELQRNPLTRIIEHLDLLRVKQGEKVDVEVPVEVTGESF-PGTIHTVE 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V + PA IP++I VD+ K G+++ + D+ P + + I Sbjct: 121 LMHVL----VKAPATAIPEAIVVDVEGRKDGENVTVADLTFPAGVEVETDPESIVVVIAI 176 Query: 187 PIS 189 P S Sbjct: 177 PSS 179 >gi|227497783|ref|ZP_03927969.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] gi|226832783|gb|EEH65166.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] Length = 207 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L R GKGSAR R+NGQ+P ++YG+ ++P+ L L Sbjct: 1 MANKAITLKGTDRTNFGKGSARQARRNGQVPVVVYGHGTEPRHFLLEEHATRLALRGNE- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + E + V+ KD Q P+ + H DF V+ V V VPV I E + Sbjct: 60 -NALVELAVDGETILVLTKDVQRHPIRPGVQHVDFQLVNRNERVEVEVPVTVIGEPVAST 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 I V + + P +IP++I +D+ ++ G +I + DI LPE +++ Sbjct: 119 IHM-----VEAAHLLVSAPVISIPEAIEIDITGVEAGTTIRVSDITLPEGVEAVTDAEED 173 Query: 181 IATIV 185 + +V Sbjct: 174 VVNVV 178 >gi|289523178|ref|ZP_06440032.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503721|gb|EFD24885.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 219 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKN 59 M + R+ +GK ++ LRK G +PA+ YG + P+ +S +I ++S + Sbjct: 1 MAVGNIDIRLEYRENLGKNRSKRLRKEGYLPAVFYGPDYKEAVPVKVSVDEILPHIHSSH 60 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + T + + + + +DYQ DP+S ++H DF Q+ +G V V VP+ IN Sbjct: 61 WKTLMFNVIFPDGKKEMAMIRDYQRDPISRQVLHIDFYQLVKGHRVLVAVPIVLINRESC 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L HE+ + +PD I VD+ L +GDS+ + DI LPE L Sbjct: 121 LGVKKGGVLIQSLHELEMEVLPTEMPDEIHVDIAGLDVGDSLRISDINLPESALVSVDLE 180 Query: 179 ITIATI 184 T+ I Sbjct: 181 DTVVQI 186 >gi|86134892|ref|ZP_01053474.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] gi|85821755|gb|EAQ42902.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] Length = 206 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG P + K +Y+ N T Sbjct: 1 MKSITIKGSKRESVGKAATKALRNAGMVPCVIYG-GETPIHFSAEEKAFKNLVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L++ E + I +D Q PVSD ++H DF Q+ + VT+++PV+ SPG+ Sbjct: 60 A--SLEVDGEKIPAILQDIQFHPVSDKILHVDFYQLFDDKEVTMNIPVQLTG--TSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD IT D++ LKIG + + + + + M N + Sbjct: 116 NGGSLRFTNRKLKVKAIPANLPDFITADISKLKIGHKLVITSL-FNDDYTFMHPDNTVVV 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|282853609|ref|ZP_06262946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|282583062|gb|EFB88442.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|314922165|gb|EFS85996.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL001PA1] gi|314965248|gb|EFT09347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA2] gi|314982385|gb|EFT26478.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA3] gi|315092574|gb|EFT64550.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA4] gi|315094008|gb|EFT65984.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL060PA1] gi|315104560|gb|EFT76536.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA2] gi|327329538|gb|EGE71298.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL103PA1] Length = 200 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 9/187 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATV 176 Query: 185 VAPISGS 191 P + S Sbjct: 177 AFPETES 183 >gi|89069015|ref|ZP_01156396.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] gi|89045384|gb|EAR51449.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] Length = 210 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R++ GKG AR R+NGQ+P ++YG DP PI L + RL F Sbjct: 1 MAGEIPDLVASKRERTGKGGAREARRNGQVPGVVYGGGVDPLPINLEYNSLLTRLRKGRF 60 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + E V VI + Q D V D+ H DF+++ S V + +PV F N +P Sbjct: 61 LSTLFNLKVEGEDDVRVICRGVQRDVVKDLPTHVDFMRLRRTSKVNLFIPVEFENHGAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+ A +IP+ ITVDL L+IGD++ + + LPE + Sbjct: 121 GIKRGGVLTVVRPEVELVVTAGDIPEKITVDLTGLEIGDTVTISSVDLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIANVSAPSG 190 >gi|303327047|ref|ZP_07357489.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] gi|302863035|gb|EFL85967.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] Length = 205 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 8/190 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD ++ LS R+ GKG + LR IP + Y + + + K LY + Sbjct: 1 MDIEK-TLSVQKREDCGKGPSGRLRSQELIPGVFYTGKGENITVQAPTLPLEK-LYEEVG 58 Query: 61 MTTILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 TT+ L+I K V+ Q P H DF V V V VP+ F+ Sbjct: 59 HTTVFNLEIDENGQKSTHPVLIWQVQRHPYKKCFTHIDFYGVDLNKEVKVDVPLEFVG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 S G+K GG L V L ++P IT+D++D+ I D+++M D++LP +++ Sbjct: 117 VSRGVKLGGVLETYRESVRLSSKPLDMPKKITIDVSDMDINDTVNMADLQLPANVTAVYD 176 Query: 177 LNITIATIVA 186 N + +++A Sbjct: 177 QNFAVVSVLA 186 >gi|159036391|ref|YP_001535644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] gi|157915226|gb|ABV96653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] Length = 234 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 7/178 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRR-GGAN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +DI V +PK Q DPV D H D L V G VTV VPV+ + E Sbjct: 60 QLFAIDISDGTQVLALPKAIQRDPVKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAA---- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +G + +S+ A +PD + + L+ G + D+RLP + + Sbjct: 116 -KGTLIVHDHDTLSVTADATRVPDHLDATIEGLEAGTQVAAGDVRLPAGVELATDPEL 172 >gi|326772330|ref|ZP_08231615.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] gi|326638463|gb|EGE39364.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] Length = 203 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L L S + Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLLEEHATRLALRSND- 59 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI G E + + KD Q P+ + H DFL V V V VPV I E +P Sbjct: 60 -NALVELDIAGGETLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGE-AAP 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 118 GTIH----MIEAATVMVSAPAVSVPEAIEVDVTGVAAGTVLTLADIALPKGVEAVADAET 173 Query: 180 TIATIV 185 + + Sbjct: 174 AVVNVA 179 >gi|317486441|ref|ZP_07945268.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] gi|316922351|gb|EFV43610.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] Length = 192 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 4/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R +GKG+ R R+ IP + Y + P+ +S + +K L+S+ TT+ L Sbjct: 7 LSVQKRAGLGKGANRRARQEELIPGVFYTAKGENLPVQMSVRSFAK-LFSQVGRTTVFNL 65 Query: 68 DIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +I + V+ Q DP++ H DF V V + VPV F + G K GGK Sbjct: 66 EIEGDGTHPVLIWATQRDPITSRFTHIDFYGVDLDKPVKITVPVEFTG--VARGTKVGGK 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L ++ L+ ++P +T+D++ + +G +I + D++LPE + N I +++ Sbjct: 124 LETYREQIQLMAKPLDMPAKVTIDISGMDVGTTIQIADVKLPEGVKAAYDNNYAIVSVLM 183 Query: 187 PIS 189 P Sbjct: 184 PGG 186 >gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|189042360|sp|A9HC01|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5] gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gluconacetobacter diazotrophicus PAl 5] Length = 206 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R++GQ+PA+IYG +P +AL + + + + + + + + + + ++ QL Sbjct: 24 RRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PVSD IH DF +++ G V V V + F E+KSPGIK+GG LN+V H V + NIP Sbjct: 84 PVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVAPIS 189 +S TVDL+ L I D++ +D++ + Q N IAT+ AP + Sbjct: 144 ESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQIPNFVIATVAAPSA 189 >gi|325067352|ref|ZP_08126025.1| 50S ribosomal protein L25P [Actinomyces oris K20] Length = 204 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L L S + Sbjct: 2 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLLEEHATRLALRSND- 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI G E + + KD Q P+ + H DFL V V V VPV I E +P Sbjct: 61 -NALVELDIAGGETLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGE-AAP 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 119 GTIH----MIEAATVLVSAPAVSVPEAIEVDVTGVAAGTVLTLADITLPKGVEAVADAET 174 Query: 180 TIATIV 185 + + Sbjct: 175 AVVNVA 180 >gi|54026868|ref|YP_121110.1| 50S ribosomal protein L25/general stress protein Ctc [Nocardia farcinica IFM 10152] gi|68053081|sp|Q5YPZ5|RL25_NOCFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54018376|dbj|BAD59746.1| putative ribosomal protein L25 [Nocardia farcinica IFM 10152] Length = 200 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 6/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R + GKG+AR R+ G +PA++YG+ S+P+ ++L+A+ + L ++ +L L Sbjct: 7 LEASVRTEFGKGAARRTRRAGNVPAVLYGHQSEPQHLSLNAQAFAAILR-EHGTNAVLNL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI + + K + P+ + HAD L V G VT V V + +PG + Sbjct: 66 DIEGKKQLALTKSVVVHPIRRYIEHADLLIVKRGEKVTADVAVTVTG-DAAPGT----LV 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +S+ A N+P++I V + D +IG I I LP+ + S + + ++ Sbjct: 121 TQEATTISIEAEALNLPEAIEVSVEDAEIGTQITAGSIALPQGVTLASDPELLVVNVI 178 >gi|296392942|ref|YP_003657826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] gi|296180089|gb|ADG96995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] Length = 209 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 6/187 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A +RD+ GKG++R R++G +PA++YG+ DPK + AK+ ++ L + N + Sbjct: 3 ETARVEATVRDEFGKGASRRARRDGHVPAVLYGHGIDPKHFNIPAKEFARVLRA-NGVNA 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I++L G E + K + P L H D + G + V VPV S Sbjct: 62 IVSLHAGGEEHLALTKTVVVHPTKSYLQHVDLQVIRRGERIAVDVPVVLTGSAAS----- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + +S+ A +IP+ I V + L+IG I ++ LPE S I Sbjct: 117 GSVVQHETTTLSVEAEAMHIPEQIEVSIEGLEIGSKIIASELELPEAVSLTGDPEQMIVQ 176 Query: 184 IVAPISG 190 I + Sbjct: 177 INEARAA 183 >gi|88856042|ref|ZP_01130703.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] gi|88814610|gb|EAR24471.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] Length = 208 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +K + RD GKG+AR LR G+IPA+IYG+ +DP +AL +I L N Sbjct: 1 MAKKAVNHVVTDARDSFGKGAARKLRALGKIPAVIYGHGTDPIHVALPGHEIGLILRKSN 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 IL LDI + + KD Q DPV I+ H D + + +G V V VP+ + E+ Sbjct: 61 ---QILDLDINGKSQLALVKDVQKDPVRQIIEHIDLVVIRKGEKVIVDVPIHLVGESAP- 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G N+ VS+ A +IP+ TVD+ + GD I+ +D+ L E + +S + Sbjct: 117 ----GTIANLDAPTVSVEAEATHIPEYFTVDIEGREEGDHIYAKDVTLVEGSELLSDPEL 172 Query: 180 TIATIVAPIS 189 + + P S Sbjct: 173 LVVGVSTPRS 182 >gi|95930456|ref|ZP_01313192.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] gi|95133496|gb|EAT15159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] Length = 207 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q E L+ +R++VGKG AR R+NG +P ++YG +P + + K + + + + Sbjct: 1 MAQAE--LNVALRERVGKGGARSARRNGLVPGVVYGPGIEPCTVNVEPKALQEAISGEAG 58 Query: 61 MTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 T+LTL + V + KD Q+D + H DF + ++ VPV + KS Sbjct: 59 WNTLLTLKGDGPFDGVLAVVKDIQVDAIRRDATHVDFQAIDSNKMLSFMVPVNAVG--KS 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG L V+ E+ ++C N+P I +D+ L+IGD +H++D+ PE +N Sbjct: 117 AGEKAGGNLQVIRKELEVVCLPANVPGHIDIDVEALEIGDVVHIDDVTAPEGVELPHDVN 176 Query: 179 ITIATIVA 186 T+ T+V Sbjct: 177 FTVITVVG 184 >gi|163786662|ref|ZP_02181110.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] gi|159878522|gb|EDP72578.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] Length = 220 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK S + LR GQ+P +IYG P + SK +Y+ + T Sbjct: 1 MKSITINGSQRESVGKKSTKALRNAGQVPCVIYGGDK-PLHFSAPELAFSKLVYTASAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD E + I +D Q PV+D +IH DF Q+ E +T+++PV+ + S G+ Sbjct: 60 VVIALD-NGEKYNAIMQDIQFHPVTDRIIHIDFYQIFENKAITMNIPVQVVG--TSKGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + + +PD I +D+ LKIGD +++ ++ + + S + N+ + Sbjct: 117 NGGNLRRPYRKLKVKAIPSKLPDFIEIDITPLKIGDKVYISEL-MNDDYSLIHPDNMVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|323705135|ref|ZP_08116711.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535561|gb|EGB25336.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] Length = 199 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + + K+ Sbjct: 1 MQNVELEAVLRTP-GKNAARKLKEKGYIPAILYGKGMESIPLAVETGKL-RTIVQKHGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L + I KD Q D ++ LIH DF +VS V VP++F Sbjct: 59 VLLNLIVNGATHQAILKDEQKDELTGKLIHIDFQRVSMNEKVEAAVPLKFEGVGVIE--S 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G + E+++ +IP+ I VD+++L IGD+I ++D+ +PE + + I Sbjct: 117 KGLLVQHQKWELNVEALPTDIPEEIVVDVSNLDIGDTILVKDVVVPEGVEKVDDSDEVIL 176 Query: 183 TIVAPISG 190 T+VAP + Sbjct: 177 TVVAPKNA 184 >gi|289178670|gb|ADC85916.1| LSU ribosomal protein L25P [Bifidobacterium animalis subsp. lactis BB-12] Length = 244 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 9/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R +IPA IY P + L ++ S L N Sbjct: 37 MANNSIVLEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN- 95 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + + KD Q +PV I+ H DF +V G + V VPV Sbjct: 96 --ALFTIKFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPVFVEGTP---- 149 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 K G V E+ + +N+P+ I V + L+ GD+I D+ LPE ++ Sbjct: 150 -KGGAIAVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPEGVELDIADPEE 208 Query: 180 TIATIVAP 187 ++ TI P Sbjct: 209 SVVTIEIP 216 >gi|251809807|ref|ZP_04824280.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|293366143|ref|ZP_06612830.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] gi|251806675|gb|EES59332.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|291319737|gb|EFE60096.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] Length = 223 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 99/189 (52%), Gaps = 4/189 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M+ + L +++R K + + LR +G++PA++YG + + + + K + + Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EV 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + Sbjct: 60 GRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AV 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 118 GAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPED 177 Query: 180 TIATIVAPI 188 +I T+V P Sbjct: 178 SIVTVVPPT 186 >gi|313835378|gb|EFS73092.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA2] gi|314929235|gb|EFS93066.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL044PA1] gi|314972372|gb|EFT16469.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA3] Length = 200 Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I E + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ + +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATV 176 Query: 185 VAPIS 189 V P + Sbjct: 177 VFPET 181 >gi|328908364|gb|EGG28123.1| ribosomal L25P family protein [Propionibacterium sp. P08] Length = 200 Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I E + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ + +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTESNEIEVQADLLNIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATV 176 Query: 185 VAPIS 189 V P + Sbjct: 177 VFPET 181 >gi|309812815|ref|ZP_07706553.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] gi|308433232|gb|EFP57126.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] Length = 283 Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 8/189 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R + GKG+AR +R+N IPA++YG+ P + L D + + N Sbjct: 56 MAADQIVLEAQLRTEFGKGAARRIRRNDMIPAVLYGHGETPVHLELPGHDTMMAVKNPN- 114 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LT+ + + +D Q + + + H D + V +G V V VPV E + Sbjct: 115 --ALLTIRFDGKEELALARDVQREVIRRFIEHVDLVIVKKGEKVEVDVPVHAEGEAAAET 172 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +++L PA +IP++ TV + + G I +D+ LP +S + Sbjct: 173 V-----VTTENGMLTVLTPATDIPEAFTVSVEGAEAGTQILAKDVTLPSGVELVSDEEML 227 Query: 181 IATIVAPIS 189 + + IS Sbjct: 228 VINVTEQIS 236 >gi|254384997|ref|ZP_05000332.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] gi|194343877|gb|EDX24843.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] Length = 196 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KLSA +RD GKGSAR R++ PA+IYG+ +DPK + + A + L + N Sbjct: 1 MSMSEVKLSAQIRDTFGKGSARQARRDALTPAVIYGHGTDPKHVNVDAHALQLALRTPN- 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++LD+G VIPK Q P+ + H DFL V +G VTV V + + + Sbjct: 60 --VLISLDLGDAGTELVIPKAVQKHPLKRSVSHVDFLIVKKGEKVTVDVAIVTEG-DLAA 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G G L + + +S+ A +IP +TV + L+ G +IH D+ LP+ T+ +I Sbjct: 117 G---GNMLETLQNTISVEAEATHIPTEVTVSIAGLEAGATIHASDLVLPKGTTLAVDGDI 173 Query: 180 TIATIV 185 + +V Sbjct: 174 AVLQVV 179 >gi|224368790|ref|YP_002602951.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfobacterium autotrophicum HRM2] gi|259646683|sp|C0QAZ0|RL25_DESAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223691506|gb|ACN14789.1| RplY [Desulfobacterium autotrophicum HRM2] Length = 216 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 5/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R GK +AR LR N +PA++YG D PI++S D++ + Sbjct: 1 MELIDLKAEPRKGRGKSAARHLRNNDAVPAVLYGAKMDSMPISVSTLDLTTMVRVHGSSG 60 Query: 63 TILTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L I + V V+ K+ Q+D +H DF ++ +T+ VPV + E S Sbjct: 61 LFINLAINGDTVPSRTVMLKEIQMDTFDLKYLHVDFQAINVSEKITISVPVEAVGE--SV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K GG + ++ E+ ++C ++P+ I +D DL++GDS+H+E+I L +N Sbjct: 119 GVKAGGMIQLIRRELDIICKPGDMPEVIQIDTTDLEVGDSVHVEEIDLGADVEIPHDVNF 178 Query: 180 TIATIVAPIS 189 T+ T+V P S Sbjct: 179 TVLTVVPPTS 188 >gi|296271108|ref|YP_003653740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] gi|296093895|gb|ADG89847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] Length = 190 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++A R GKG+AR LR+ G++PA++YG+ ++PK + L D+ L + N Sbjct: 1 MSEVVINAEPRTAFGKGAARKLRRGGKVPAVLYGHGTEPKHLTLPGHDLLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +PK Q DP+ L H D L+V G VTV +PV + I Sbjct: 58 VLIRLKGDGIDEIALPKGVQRDPIKGFLQHVDLLRVHRGEKVTVELPVTVTGDPIGSAI- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + V + A +IP+S+ VD+ +G ++H D+ LPE S + + Sbjct: 117 ----VEQLLVAVPVEAEATHIPESVEVDVTGKDVGFTVHARDLALPEGVSLAGDPDALVL 172 Query: 183 TIV 185 ++ Sbjct: 173 HVI 175 >gi|42526848|ref|NP_971946.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema denticola ATCC 35405] gi|71153672|sp|Q73N16|RL25_TREDE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41817163|gb|AAS11857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Treponema denticola ATCC 35405] Length = 211 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+A R GK +A +RK G+IPA++Y PI + ++ K L+ + Sbjct: 1 MEQRLLNANERSTYGKNAAVKMRKAGRIPAVMYDRHGKSVPIDVDEREFMK-LFKLVTES 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TL+ + V KD+Q D VSD + H DF +V G T+ V +R E G++ Sbjct: 60 TIVTLNAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL--EGSPEGVR 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A Sbjct: 118 HGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVA 177 Query: 183 TI 184 I Sbjct: 178 AI 179 >gi|312880020|ref|ZP_07739820.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] gi|310783311|gb|EFQ23709.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] Length = 217 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 2/190 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 Q K+ R++ G G R LR G IPA++YG + K + K++ + S ++ Sbjct: 2 QDRAKVVFRSREETGTGVCRKLRVEGLIPAVLYGPAFPEGKKGVVGYKEVLPVVSSSHWE 61 Query: 62 TTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTIL LD+G + ++ Q ++ +H DFLQ+ + + V VPV N + G Sbjct: 62 TTILELDLGDGRQEMALMREIQRHALTRSPLHIDFLQLVKDHKIRVKVPVHLDNRDTCAG 121 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L +E+ + +IP+ I +++ L + I + D+ LP+ + + + Sbjct: 122 VKLGGLLEQFLYELEVEVLPQDIPEQIRLNVQGLGMNKEIKVSDVPLPQGATWVQDPDSV 181 Query: 181 IATIVAPISG 190 + ++V P Sbjct: 182 VVSLVPPKGA 191 >gi|229494937|ref|ZP_04388688.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] gi|229318161|gb|EEN84031.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] Length = 202 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D + L + + Sbjct: 1 MS-EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFAAILRA-HG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + K + P+ + + HAD L + +G VT+ V V + + + Sbjct: 59 TNAILTLDIEGTEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTIDVNVIVVGDAAA-- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +S+ A +IP+ I V + L+IG I + LP+ ++ + + Sbjct: 117 ---GTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPKGSTLQADADTL 173 Query: 181 IATIVA 186 I +VA Sbjct: 174 IVNVVA 179 >gi|225012236|ref|ZP_03702673.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] gi|225003791|gb|EEG41764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] Length = 216 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG +P + D SK +Y+ N T Sbjct: 1 MKSITINGSKRESVGKVATKALRNAGRVPCVLYGGG-EPLHFSAPELDFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD E V I +D Q P++D ++H DF ++ + V++++PV+ E +PG+ Sbjct: 60 VVINLD--GENVAAILQDIQFHPLTDKILHIDFYRLFDDKEVSMNIPVKV--EGAAPGVL 115 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG L + ++ + ++PD I +++ LK+G+ ++ +++ E+ + + N + Sbjct: 116 NSGGVLVLNKRKLRVKALPKDLPDFIVANISKLKLGNKLYTAELQT-EEYTLLHPDNTVV 174 Query: 182 ATI 184 + Sbjct: 175 CQV 177 >gi|260591411|ref|ZP_05856869.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] gi|260536603|gb|EEX19220.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] Length = 200 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAK--DISKRLYS 57 KE K++ R +GK +++ LRK G +P +YG P ++ +A ++ K +Y+ Sbjct: 1 MKEIKVAGQKRTDLGKKASKQLRKEGLVPCNLYGEAQKDGKPLALSFTASMAELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + Sbjct: 61 PHIY--VVELVIDGERHTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ +L +G SI + + E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTNLHLGKSIKVGQLSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|94264423|ref|ZP_01288213.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93455180|gb|EAT05398.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 99/186 (53%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + + Sbjct: 3 QVDITANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRNAV 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ + HVI ++ Q DPV D ++HADF +S ++T VP+R+ K+ G Sbjct: 63 INLEVNDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRYKG--KARG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP + Sbjct: 121 VELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALPAGVELADKPEGV 180 Query: 181 IATIVA 186 ++ Sbjct: 181 CVAVLG 186 >gi|239637487|ref|ZP_04678461.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] gi|239596932|gb|EEQ79455.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] Length = 220 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LR G++PA++YG + + + + K + + + Sbjct: 2 TSLKSIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+G Sbjct: 61 IELGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGAKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+ Sbjct: 119 GVVEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVSDIKVSGDFTIENEPEDSIVTV 178 Query: 185 VAPI 188 V P Sbjct: 179 VPPT 182 >gi|264676949|ref|YP_003276855.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] gi|262207461|gb|ACY31559.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] Length = 207 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGTAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|325295185|ref|YP_004281699.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065633|gb|ADY73640.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 195 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K L A R+K GKG AR LR+ G +PA+IYG + IA+ A ++ K + Sbjct: 1 MKTVSLKATRREKTGKGVARKLRREGLLPAVIYGGGRPEATHIAIPASEVRKIKHHHG-- 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LD+ E I KD Q + + D+ IH DF +V G T+T V + F+ G+ Sbjct: 59 --LVKLDLDGEERICILKDIQYNWLGDVPIHVDFQEVKFGETITTVVELEFVG--TPIGV 114 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++GG L ++ E+ + IP+ I VD+++L GD++H+ +I +PE + T Sbjct: 115 SEEGGVLEIMKREIEIETLPRAIPEKIVVDISNLHAGDALHVGEISVPEGIKIVDNPEET 174 Query: 181 IATIV 185 + + Sbjct: 175 VVVVA 179 >gi|322420138|ref|YP_004199361.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Geobacter sp. M18] gi|320126525|gb|ADW14085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M18] Length = 195 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +R + GKG R LR G++PA++YG +P I+L K++S+ + + ILTL Sbjct: 6 LNVEIRKETGKGICRRLRAAGRVPAVVYGKGMEPVSISLVQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 EL +VI D D + + H D +++ V VHV + + G+K GG Sbjct: 66 KGAGELEGANVIVADLLRDSLKNQPRHVDLHKINLADKVKVHVKLNLVG--TPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HEV + C +IP I V++ +L IG S+H+ DI P T+ +S + +I+ Sbjct: 124 FLDFAMHEVEVECLPVHIPAHINVEVAELTIGHSVHVSDIVAPVGTTIVSDPKAPVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|261405476|ref|YP_003241717.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281939|gb|ACX63910.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 210 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 8/190 (4%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ Sbjct: 1 MSKGNTVQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHT-- 58 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + LDI G V V+ KD Q + H DFL++S V V +PV + + + Sbjct: 59 GRSEVFQLDIPGSGKVPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIPVDY--QGTA 114 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG L E+ + ++P ++ D++ L+IGD + + D+++PE + + Sbjct: 115 AGTKSGGILQTQVTEIEVEGLPGDLPTTLEADVSALEIGDKLTVADLKVPEGITLHASEE 174 Query: 179 ITIATIVAPI 188 +AT++ P Sbjct: 175 EILATVIVPR 184 >gi|299531512|ref|ZP_07044918.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] gi|298720475|gb|EFI61426.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] Length = 207 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|329925390|ref|ZP_08280312.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328939877|gb|EGG36214.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 210 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 8/190 (4%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ Sbjct: 1 MSKGNTVQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHT-- 58 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + LDI G V V+ KD Q + H DFL++S V V +PV + + + Sbjct: 59 GRSEVFQLDIPGSGKVPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIPVDY--QGTA 114 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG L E+ + ++P ++ D++ L+IGD + + D+++PE + + Sbjct: 115 AGTKSGGILQTQVTEIEVEGLPGDLPTTLEADVSTLEIGDKLTVADLKVPEGITLHASEE 174 Query: 179 ITIATIVAPI 188 +AT++ P Sbjct: 175 EILATVIVPR 184 >gi|319891454|ref|YP_004148329.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|317161150|gb|ADV04693.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|323465376|gb|ADX77529.1| ribosomal protein L25 [Staphylococcus pseudintermedius ED99] Length = 216 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 97/180 (53%), Gaps = 4/180 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K +G R +R+ G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRGDLRKIREAGKVPAVVYGYGTKNVSVKVDEVEFIKLIR-EVGRNGVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ D + + + H DFL ++ TV VPV I E +PG K+GG Sbjct: 63 LGVGSKQIKVMVSDYQYDSLKNQITHIDFLAINMTEERTVEVPVHLIGE--APGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + ++IP+ I VD+++L I DS+ + D+++ + ++ TI ++VA Sbjct: 121 VEQPLFNLEITATPDSIPEYIEVDISELNINDSLSVADVKVSGDFTIENEAEDTIVSVVA 180 >gi|317502723|ref|ZP_07960834.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] gi|315666167|gb|EFV05723.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] Length = 204 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 96/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 KE ++ R +GK +++ LRK G IP +YG + ++ ++ K +Y Sbjct: 1 MKEINVAGQKRTDLGKKASKELRKQGFIPCNLYGEKKNADGKPEAHAFTIAFSELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I E I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 61 TPHIY--VINLNIEGEHHTAILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLEITTS 175 Query: 177 LNITIATI 184 ++ + ++ Sbjct: 176 KDVVVCSV 183 >gi|78357170|ref|YP_388619.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109893360|sp|Q30ZH2|RL25_DESDG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78219575|gb|ABB38924.1| LSU ribosomal protein L25P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 193 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 5/190 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q + LS R+ +GKG+ R LR ++P I Y + P+A+ + K LY Sbjct: 1 MSQ-QMTLSVQKREGLGKGANRKLRTAKKVPGIFYNSEGKNIPVAIDGTQLEK-LYETAG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ LDI E + + P H D V + +P++ + G Sbjct: 59 KTTVFNLDIEGETAPCLIWQIERHPYKPFFTHVDLFGVDMEKPIKARIPLKITG--VAKG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GG++ V V + ++P I ++++++++GD++H+ D++L + + N Sbjct: 117 TKIGGRMEVYRDFVDVFTKPGSMPKVIDINVSNMEMGDAVHVADLKLEDG-HCIYDSNYV 175 Query: 181 IATIVAPISG 190 I + AP G Sbjct: 176 IVRVSAPRGG 185 >gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] Length = 188 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P I+YG +DP PI + D+ K+L + F+ T+ L + + V VI ++ Q D V Sbjct: 1 MVPGIVYGGDNDPLPIQIPFNDLLKKLKAGRFLATLWNLKVDGHDDVRVICRNVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S V +H+PV FINE+ +PGIK+GG L VV +V L A +IP+ I Sbjct: 61 DLPTHLDLMRLRRTSRVNLHIPVEFINEDAAPGIKRGGVLTVVRADVELNVLAGDIPEKI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL L+IGD++ + + LP+ + IA + AP Sbjct: 121 VVDLTGLEIGDTVTISMVNLPDGVKPTIDRDFVIANVSAPSG 162 >gi|281420709|ref|ZP_06251708.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] gi|281405482|gb|EFB36162.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] Length = 201 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 KE ++ R +GK +++ LRK G IP +YG + A+ ++ K +Y Sbjct: 1 MKEINVTGQKRTDLGKKASKTLRKEGLIPCNLYGEKKGENGAPEALSFAVPFAELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ Sbjct: 61 TPHVY--VINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ +LKIG SI + D+ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQVIPEHLDIDVTELKIGKSIKVGDLSF-EGLELATS 175 Query: 177 LNITIATI 184 + + +I Sbjct: 176 KAVVVCSI 183 >gi|282858294|ref|ZP_06267479.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] gi|282588925|gb|EFB94045.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] Length = 197 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIAL----SAKDISKRLYS 57 KE KLS R+ +GK ++RL+RK G +P +YG + P+AL ++ K +Y+ Sbjct: 1 MKEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGIPVALSFASPMSELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 N + L I E I KD Q P +D L+H DF +V+E + + VPV+ Sbjct: 61 PNIYG--VELTIDGEKHLAIMKDLQFHPTTDALLHVDFYEVTEEKEIIMGVPVKLAG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P N IP+ +++D+ L++G +I + + E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPFNKIPEFLSIDVTALQLGKAIKVGQLSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|288554661|ref|YP_003426596.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] gi|288545821|gb|ADC49704.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] Length = 211 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +RK+G +PAI+YGN + KP+ + + + K + + + Sbjct: 3 TTLQANPRTDLTGSATRQIRKDGHVPAILYGNKIESKPVYVESVEFLKTVR-EVGKNGLF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L++ V+ D Q+DP+ + +H DF +V S + VPVR E +PG K+GG Sbjct: 62 SLNVDGSKHQVMIHDVQIDPLKNEYVHVDFFEVDMKSEIDADVPVRLTGE--APGTKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 L+ + +++S+ C N+IP+ I VD++ L IGDSI + D+ Sbjct: 120 VLSHLLYDISVKCLPNDIPEEIKVDVSGLNIGDSIQITDL 159 >gi|282879731|ref|ZP_06288461.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] gi|281306400|gb|EFA98430.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] Length = 216 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 100/187 (53%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIAL--SAKDISKRLYS 57 KE +S R+ +GK +++ LRK G +P +YG + P +A ++ K +Y+ Sbjct: 1 MKEINVSGQKREDLGKKASKHLRKEGLVPCNLYGEQKEDGKPVALAFAAPMSELRKIVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + Sbjct: 61 PHIY--VINLNIDGEHHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ L+IG SI + + + + + Sbjct: 117 AQGVRDGGRMNLSVRKINVTAPYQQIPEHLDIDVTKLRIGKSIKVGQLSF-DGLTMATSK 175 Query: 178 NITIATI 184 ++ + +I Sbjct: 176 DVVVCSI 182 >gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli IE4771] Length = 152 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 69/139 (49%), Positives = 99/139 (71%) Query: 52 SKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 +KR+++ FMTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV Sbjct: 2 TKRIHAGGFMTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVH 61 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 FINE KS G+K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ Sbjct: 62 FINEEKSQGLKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGV 121 Query: 172 SSMSQLNITIATIVAPISG 190 +++ + TIATIVAP +G Sbjct: 122 TTVIDRDFTIATIVAPAAG 140 >gi|222054664|ref|YP_002537026.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] gi|254801049|sp|B9M5U4|RL25_GEOSF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221563953|gb|ACM19925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] Length = 196 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQ+ L+ +R K GKG +R LR++ IP ++YG + ++L K++S + + Sbjct: 1 MDQRI--LNVELRSKTGKGISRQLRRSESIPGVVYGKGIESVSVSLKTKELSNAIAGEGG 58 Query: 61 MTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ILTL G + VI D D + + +H D +++ + V V V + + Sbjct: 59 RNHILTLKGGGSLDGQMVIVADLLQDSLKGLPLHVDLHKINLADKIKVKVKVNLVG--TA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+ HE+ + C ++IP+ + VD+ L +G SIH+ D++ + Sbjct: 117 AGVKEGGLLDFAMHEIEIECLPSHIPEHLDVDVTSLTLGHSIHIGDLKELPGIKVLGDPK 176 Query: 179 ITIATIVA 186 +I +++ Sbjct: 177 ASIISVLG 184 >gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.] Length = 211 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 5/185 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R+ G G AR+LR+ G+IPA+IYG D ++++ KD+ L IL + Sbjct: 1 MKAKLRESAGNGPARVLRRMGEIPAVIYGPGKDTNLLSITIKDLEDILKKAKVGQAILNI 60 Query: 68 DIGK---ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +I + K+ Q+ PVS L+H DF ++S + V +PV + + + GI G Sbjct: 61 EIQNGALHTRTAMIKELQIHPVSRELLHVDFYEISMDRKIKVKIPV--VTKGIAKGIDFG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++ E+ +LC IP+SI +D+ DL IGDSIH+ D+ LP+ +N TI T+ Sbjct: 119 GMLQIIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDLVLPQGVEIPDDVNYTIVTV 178 Query: 185 VAPIS 189 + S Sbjct: 179 LTTKS 183 >gi|269957488|ref|YP_003327277.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] gi|269306169|gb|ACZ31719.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] Length = 199 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A R + GKG+AR LR+ +IPA++YG+ DP +AL + L N + Sbjct: 3 EIKLVAEARSEFGKGAARRLRRESKIPAVLYGHGGDPVHVALPGHQTALALRQAN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++ + + KD Q D + ++ H D L V +G + V VPV E+ +PG Sbjct: 60 FAVELDGKSQLAVVKDVQRDAIGTVIEHIDLLVVKKGEKIAVDVPVHITGES-APGTIH- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V +S+ A +IP SI V + L G +I D+ LP ++ ++ + + + Sbjct: 118 ---IVEAQTLSVEAEATHIPVSIEVSIEGLAAGTNIFAADVTLPAGSTLLTDGDHIVVAV 174 Query: 185 VAPI 188 P Sbjct: 175 AEPR 178 >gi|253700098|ref|YP_003021287.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sp. M21] gi|259646688|sp|C6E500|RL25_GEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|251774948|gb|ACT17529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M21] Length = 197 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+K GKG R LR G++PA++YG P I+L K++S+ + + ILTL Sbjct: 6 LKVELREKTGKGICRRLRAAGRVPAVVYGKGITPVSISLGQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + EL +VI D D + + H D +++ V VHV + + G+K GG Sbjct: 66 ECAGELNGANVIVADLLRDSLRNQPRHVDLHKINLADKVKVHVKLNLVG--TPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HE+ + C +IP I VD+ +L IG S+H+ +I P T+ +S + +I+ Sbjct: 124 FLDFAMHEIEVECLPVHIPAHINVDVTELLIGHSVHVGEIAAPIGTAILSDPKAAVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|300726453|ref|ZP_07059899.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] gi|299776181|gb|EFI72745.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] Length = 197 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 97/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 KE ++ R+ +GK +++ LRK G +P +YG D A+S K++ K +Y Sbjct: 1 MKEIDVTGQKRENLGKKASKALRKEGFVPCNLYGEKKDENGAPVAFSFAVSFKELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ Sbjct: 61 TPHVY--VINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLNG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLELATP 175 Query: 177 LNITIATI 184 + + +I Sbjct: 176 KEVVVCSI 183 >gi|261880168|ref|ZP_06006595.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] gi|270333139|gb|EFA43925.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] Length = 217 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIAL----SAKDISKRLYS 57 KE L+ R +GK +++ LRK G IP +YG + KP+A K++ K +Y+ Sbjct: 1 MKEISLTGKKRVDLGKKASKTLRKEGLIPCNLYGEAKENGKPVATAFVSPFKELRKLIYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ + + E I K+ Q PV+D +H DF +V++ +T+ +PV+ + Sbjct: 61 PHIY--VIKISLDGEEHTAIMKEIQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++ + P IP+ + +D++ L IG SI + D+ E + Sbjct: 117 AQGVRDGGRMNLSIRKIEVTAPYQQIPEHLDIDVSKLTIGKSIRVGDLSY-EGLKYATSK 175 Query: 178 NITIATI 184 N+ I +I Sbjct: 176 NVVICSI 182 >gi|170782787|ref|YP_001711121.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. sepedonicus] gi|169157357|emb|CAQ02544.1| probable 50S ribosomal protein L25 [Clavibacter michiganensis subsp. sepedonicus] Length = 214 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N I+T Sbjct: 5 NLSAELRTQFGKGAARKIRAVGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN---QIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI V+ KD Q DPV I+ H D + V G V V VP+ E+ G Sbjct: 62 LDIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRRGERVEVEVPIHVEGESYP-----GTI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+ +++ A +IP+ TV + + G I + + LP + ++ + I Sbjct: 117 HNLENTSITVDVEATHIPERFTVSIEGFEEGTQITVGQVDLPAGANLVTDPETLVLAISV 176 Query: 187 P 187 P Sbjct: 177 P 177 >gi|330686084|gb|EGG97706.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU121] Length = 220 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LR G++PA++YG + + + + K + + + Sbjct: 2 TSLKSIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+G Sbjct: 61 IELGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGAKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+ Sbjct: 119 GVVEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVADIKVSGDFTIENEPEDSIVTV 178 Query: 185 VAPI 188 V P Sbjct: 179 VPPT 182 >gi|319953434|ref|YP_004164701.1| lsu ribosomal protein l25p [Cellulophaga algicola DSM 14237] gi|319422094|gb|ADV49203.1| LSU ribosomal protein L25P [Cellulophaga algicola DSM 14237] Length = 207 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK + + LR G++P ++YG P + +Y+ N T Sbjct: 1 MKSITISGSKRESVGKKATKALRNAGKVPCVLYG-GETPLHFSADEPAFKTLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ G + + +D Q PV+D ++H DF Q+ VT+ +PV+ SPG+ Sbjct: 60 AVIEIE-GGDKFDAVLQDIQFHPVTDAILHIDFYQLFADKEVTMDIPVQLKG--NSPGVM 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ +PD +D++ LKIG++I +E + L ++ + + N + Sbjct: 117 NGGRLLFRKRKLTIKALPAKLPDFFDIDISKLKIGNNITVETL-LKDEFTILHPENTVVV 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|167629342|ref|YP_001679841.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] gi|226736327|sp|B0TBA3|RL25_HELMI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167592082|gb|ABZ83830.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] Length = 231 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A+ R+K +G + LRK G +PA++YG I+++AK++S L + + IL Sbjct: 5 ELRAIRREKGSRGYIKELRKRGLLPAVVYGKDKPDMLISVNAKELSGLLKAMGSASAILD 64 Query: 67 LDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + + V+ K+ Q DPV + H DF V V +P+ + G+K G Sbjct: 65 LQVEGSDDRHKVMLKEMQRDPVGRMPNHVDFQLVDWNKPVHAEIPIHLVG--TPAGVKAG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + V + +P +D++ L++ D + + DI P + +S+ + I +I Sbjct: 123 GIIQHGLRTVEVEGLPGKLPPRFDIDISHLELHDKMTVADITSPAGIAIISEPDQVILSI 182 Query: 185 VAPIS 189 + P + Sbjct: 183 IVPRA 187 >gi|221068918|ref|ZP_03545023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] gi|220713941|gb|EED69309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] Length = 207 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F +++L Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSVL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEVNGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|27469200|ref|NP_765837.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis ATCC 12228] gi|71153665|sp|Q8CQU8|RL25_STAES RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27316749|gb|AAO05924.1|AE016751_219 50S ribosomal protein L25 [Staphylococcus epidermidis ATCC 12228] Length = 219 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 121 VEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|149921897|ref|ZP_01910341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] gi|149817250|gb|EDM76727.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] Length = 201 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 9/194 (4%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + E KL+A +R GKG +R LR G IPA++YG + +S +++ + + + Sbjct: 1 MTETEFGKLNASVRSNTGKGVSRKLRAQGLIPAVMYGKGEGNVMLTVSPRELRRAMDPQR 60 Query: 60 FMTTILTLDIGKE-----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 + T TL I E + DYQ DP+ D +H DFL+V S + +PV +I Sbjct: 61 KLNTFFTLTIQDEGGASSQEQCVVTDYQADPIRDEFLHIDFLRVDPNSEIVTKIPVEYIG 120 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 ++ G+ GGKL + +P +TVD++ L G ++ M+D+ L E + Sbjct: 121 --RAVGVVAGGKLRTYQRTTRVAAKPAEVPVKLTVDVSPLDAGSTLRMKDLNL-ENARLL 177 Query: 175 SQLNITIATIVAPI 188 ++ +A + P Sbjct: 178 DHPDVVVAHVDPPR 191 >gi|306835690|ref|ZP_07468696.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] gi|304568408|gb|EFM43967.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] Length = 237 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ + A R GKG AR LR++ ++P +IYG+ +P A+ DI + + N Sbjct: 17 MAERPI-IKAEPRTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDIQSLVRN-NG 74 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K+ + ++ + H D L + G V V VP+ E+ +PG Sbjct: 75 VNAVLELEIEGEQYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGES-APG 133 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +V+ + +IP+ I + + L+ G+ I DI +PE T+ ++ Sbjct: 134 TMHIQDADVLM----VEADVLSIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETV 189 Query: 181 IATIVAP 187 I +I P Sbjct: 190 ILSISLP 196 >gi|325270437|ref|ZP_08137041.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] gi|324987233|gb|EGC19212.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIAL--SAKDISKRLYS 57 KE K+S R +GK +++LLRK G +P +YG P ++ ++ K +Y+ Sbjct: 1 MKEIKVSGQKRTDLGKKASKLLRKEGLVPCNLYGEAHKDGKPVAVSFAAPMAELRKVVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q PV+D L+H DF +V++ +T+ VPV+ Sbjct: 61 PHIY--VIELVIDGESHTAVLKELQFHPVTDALLHIDFYEVNDQKPITIGVPVKLSG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ L++G SI + ++ E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTGLQLGKSIKVGELSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|254445745|ref|ZP_05059221.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] gi|198260053|gb|EDY84361.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] Length = 210 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 4/186 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 ++A RD+ G S+ LR G++PA++YG P+ ++L A+++ L + Sbjct: 26 TMNTLTINASNRDQAGSASSGRLRAEGRVPAVVYGKSKAPQNLSLDARELRILLRTIGNN 85 Query: 62 TTILTLD-IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ++ L E I K+ Q P+ D H DF +V + + +PV I E + G Sbjct: 86 TPVVQLKADDGEPRTSIIKEVQRHPIKDSYTHVDFQEVGADELIVLEIPVHPIGE--ADG 143 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K G + V H VS+ C NIP SI D++ LK+GDS H+ + + + Sbjct: 144 VKNESGTIETVSHTVSVRCLPKNIPASIDADVSALKVGDSFHVSQLPEMDGIEYLDAPEQ 203 Query: 180 TIATIV 185 + +V Sbjct: 204 PVFAVV 209 >gi|220904720|ref|YP_002480032.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254801042|sp|B8J0S7|RL25_DESDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219869019|gb|ACL49354.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 199 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 7/185 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LS R+ GKG + LR IP + Y + + A + K +Y + TT+ Sbjct: 4 EKTLSVQKREGYGKGPSGRLRAQKLIPGVFYTPKGENISVQAPALPLQK-IYEEMGHTTV 62 Query: 65 LTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L+I K V+ Q P H DF V VTV VPV F+ S G Sbjct: 63 FNLEIEENGQKTAYPVLIWQVQFHPYKRAFTHIDFYGVDLDKEVTVDVPVEFVG--TSRG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L V L N+P ITVD+ D+ I D+I + D++LPE + N Sbjct: 121 VKLGGVLETYREMVRLTSKPLNMPQKITVDVTDMGINDTISVGDLKLPENVRAEFDQNYA 180 Query: 181 IATIV 185 + T++ Sbjct: 181 LVTVI 185 >gi|94265983|ref|ZP_01289706.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93453449|gb|EAT03865.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 99/186 (53%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + + Sbjct: 3 QVDIAANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRNAV 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ + HVI ++ Q DPV D ++HADF +S ++T VP+R+ K+ G Sbjct: 63 INLEVKDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRYKG--KARG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP + Sbjct: 121 VELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALPPGVELADKPEGV 180 Query: 181 IATIVA 186 ++ Sbjct: 181 CVAVLG 186 >gi|301060863|ref|ZP_07201672.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] gi|300445037|gb|EFK08993.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] Length = 229 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 9/189 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q L+A +R + GKG+AR LR+N QIPAI YG DP + + + + + Sbjct: 1 MSQ--LALAAHIRTETGKGAARRLRQNNQIPAIFYGPGVDPIMLRIEYSRLLELEKAGKG 58 Query: 61 MTTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 IL L I G+ + V+ K+ +DP+ + +HADF ++S +T+ +PV +N Sbjct: 59 ENAILDLKIHTDQGETIKKVMVKELTVDPLKNTFVHADFYEISNDREITLPIPVHLLN-- 116 Query: 117 KSPGI-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G+ ++GG L + EV++ C + + + + +D+ DL +GD++ + D+ LPE M Sbjct: 117 TPIGVAEEGGILQQIRREVTITCFPDKLIEFLEIDIADLNVGDTVRIGDLELPEGIQIME 176 Query: 176 QLNITIATI 184 + N+T+A + Sbjct: 177 EPNLTVAVV 185 >gi|116626137|ref|YP_828293.1| 50S ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] gi|116229299|gb|ABJ88008.1| LSU ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] Length = 227 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 4/185 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ + A +R+ GK AR R G IPA++YG +P +A+S +DI K + S + T Sbjct: 3 KDITVPAEIRNSRGKNEARRTRMAGNIPAVVYGAYQEPVSVAVSPRDIVKIIRSNTGLNT 62 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I TL I G E V+ D Q+DP+ L+HADF +V + V VPV E G+K Sbjct: 63 IFTLAIAGGETTPVMIVDRQVDPIKSTLLHADFKRVDLTKRIRVSVPVFTEGE--PAGVK 120 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 QGG L ++ + + C ++IP+ V++++L IG S D+ L +S I Sbjct: 121 VQGGLLEIISRAIEIECLPDDIPEKFVVNVSELMIGQSKRGSDVALSGSMKLVSDPQTVI 180 Query: 182 ATIVA 186 A IVA Sbjct: 181 AHIVA 185 >gi|332971129|gb|EGK10094.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella kingae ATCC 23330] Length = 188 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR N Q+PA++YG + K I + K++ L + F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHNAQVPAVVYGLG-ETKAITVDHKEMYFALQKETFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 I + +VI +DYQ+ PV + H DF + V + +PV +N S +K Q G+ Sbjct: 63 SIDGKEQNVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRIKLPVHIVNAEISHAVKLQSGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ DI+ PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCEKVVAGDILHLSDIKYPEGVQSIALKRNSNLAVAT 182 Query: 184 IVA 186 + Sbjct: 183 VTG 185 >gi|197119140|ref|YP_002139567.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter bemidjiensis Bem] gi|226736325|sp|B5EHX2|RL25_GEOBB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|197088500|gb|ACH39771.1| ribosomal protein L25 [Geobacter bemidjiensis Bem] Length = 197 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R++ GKG R LR G++PA++YG P I+L K++S+ + + ILTL Sbjct: 6 LKAELREQTGKGICRRLRAAGRVPAVVYGKGIAPVSISLGQKELSEAIAGEGGRNHILTL 65 Query: 68 DIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + EL VI D D + ++ H D +++ V VHV + + G+K GG Sbjct: 66 ECAGELNGASVIVADLLRDSLKNVPRHVDLHKINLADKVKVHVKLNLVG--TPAGVKAGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ HEV + C +IP I VD+ +L IG S+H+ I P T+ +S ++ +I+ Sbjct: 124 FLDFAMHEVEVECLPVHIPAHINVDVAELLIGHSVHVGQIVAPIGTAILSDPKASVVSIL 183 Query: 186 A 186 Sbjct: 184 G 184 >gi|124514473|gb|EAY55986.1| ribosomal protein L25 [Leptospirillum rubarum] Length = 207 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 7/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 1 MQNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSRGKA-TSLSLNLAHVQKAFHSHAGSH 59 Query: 63 TILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I E Sbjct: 60 AIFRLKVTGTSDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIGE-T 118 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K GG L E+++ C +PD + VD + L + +S H+ D+ + Sbjct: 119 PAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASSLAMNESFHVRDLPAMPGLRVLDSP 178 Query: 178 NITIATIVAPIS 189 + + I+ P + Sbjct: 179 DTVLVHILPPRT 190 >gi|225166107|ref|ZP_03727838.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] gi|224799649|gb|EEG18147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] Length = 250 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+ R + G+ ++R +RK QIPAI+YG + P+ +A+ A + +K L + Sbjct: 1 MSTTQHILNVAPRAQTGRSASRRVRKANQIPAILYGKHTKPETLAVDAPEFAKLLKAVAG 60 Query: 61 MTTILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + I+ L + ++ Q DP++D +H D +V + ++VPV + E Sbjct: 61 RSLIIELHRKDKATDNKALSFLQEVQRDPITDRFLHVDLQEVKADEKMDINVPVSLVGE- 119 Query: 117 KSPGIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 S G+K Q G L++ H + + C ++P I VD+ +LK G+SI + I+ P Sbjct: 120 -SFGVKNQNGVLDINAHTLRIRCLPKDLPPHIEVDVTELKAGESIKVGSIKAPAGVELRD 178 Query: 176 QLNITIAT 183 I + Sbjct: 179 LPGHPIVS 186 >gi|258654661|ref|YP_003203817.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] gi|258557886|gb|ACV80828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] Length = 207 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L A R + GKG AR +R+ G++PA++YG+ +DP+ ++L+A++ + + K Sbjct: 1 MSEVRLIAETRTEFGKGFARRIRRAGKVPAVLYGHGTDPRHLSLTAREFAAAI--KGGAN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+LTL + +PK P+ D H D L V G VTV VPV + +S Sbjct: 59 TVLTLQLEGGDELALPKSVVRHPLRDYFEHVDLLLVRRGEKVTVEVPVIVEGDAES---- 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + +S+ A +IPDS++VDL G I D+ LP S ++ + Sbjct: 115 -GTLVLNDLTTLSIEVEALSIPDSLSVDLTGAVAGTQILAGDVTLPAGASLITDAEALVV 173 Query: 183 TI-VAPIS 189 + VAP + Sbjct: 174 AVTVAPTA 181 >gi|313792871|gb|EFS40938.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA1] gi|313802676|gb|EFS43898.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA2] gi|314964289|gb|EFT08389.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA1] gi|315078695|gb|EFT50726.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA2] gi|327456830|gb|EGF03485.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL092PA1] Length = 205 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARHIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATV 176 Query: 185 VAPIS 189 P + Sbjct: 177 AFPET 181 >gi|148273454|ref|YP_001223015.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831384|emb|CAN02342.1| 50S ribosomal protein L25 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 214 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N I+T Sbjct: 5 NLSAELRTQFGKGAARKIRAIGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN---QIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI V+ KD Q DPV I+ H D + V +G V V VP+ E+ G Sbjct: 62 LDIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRQGERVEVEVPIHVEGESYP-----GTI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N+ +++ A +IP+ V + + G I + LP + ++ + I Sbjct: 117 HNLEYTSITVDVEATHIPERFVVSIEGFEEGTQITAGQVDLPAGATLVTDPETLVLAISV 176 Query: 187 P 187 P Sbjct: 177 P 177 >gi|224475643|ref|YP_002633249.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus carnosus subsp. carnosus TM300] gi|254801062|sp|B9DLD8|RL25_STACT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222420250|emb|CAL27064.1| 50S ribosomal protein L25 [Staphylococcus carnosus subsp. carnosus TM300] Length = 214 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 94/184 (51%), Gaps = 4/184 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + +R +G++PA++YG + + + K + + ++ Sbjct: 4 LKSIIRQGKQRRSDLTAIRNSGKVPAVMYGYGQKNVSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVHLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 ++ + + NIP+ + V+++ L+IGDS+ + D+ + ++ T+ T+V Sbjct: 121 VDQPLFNLEVTATPENIPEYLEVEISGLEIGDSLSVADLNTTGDFTIENEPEATVVTVVP 180 Query: 187 PISG 190 P G Sbjct: 181 PTQG 184 >gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] Length = 179 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P +++G ++P I + ++ K+L + F +T+ L + E V VI +D Q D V Sbjct: 1 MVPGVVFGGDAEPMSIQIPFNELLKKLKAGRFKSTLWNLKVEGQEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S V + VPV FINE +PGIK+GG L V EV L+ A +IP+ + Sbjct: 61 DLPTHFDLMRLRRTSKVNLFVPVEFINEEAAPGIKRGGVLTAVRPEVELVVTAGDIPEKL 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL L IGD++ + + +PE + +A I AP Sbjct: 121 VVDLTGLNIGDTVTISSVTMPEGAKPTIDRDFVVANISAPSG 162 >gi|116751071|ref|YP_847758.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophobacter fumaroxidans MPOB] gi|166223726|sp|A0LPH1|RL25_SYNFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116700135|gb|ABK19323.1| LSU ribosomal protein L25P [Syntrophobacter fumaroxidans MPOB] Length = 199 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 6/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L A R K GKG AR LR+N +PA++YG ++ +++ + + + L + + Sbjct: 2 DIELVAQTRTKSGKGPARALRRNEMVPAVLYGPKAETVSLSVPRQRLERLLRDMGEESKL 61 Query: 65 LTLDIGK----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L L + E+ V+ ++ Q+ PV +H DF +V + V VPV + E G Sbjct: 62 LRLTVEGDGTAEMKQVLIREVQVHPVRRRFLHVDFYEVPLDHPIVVEVPVELLGE--PVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG LN++ +S+ C IP+ + VD++ L IG SI +E +R + Sbjct: 120 VKKGGTLNLIQRMLSVRCLPGEIPEKVQVDVSKLDIGSSIQVEQLRTIVPFELTDDGGMA 179 Query: 181 IATIVAPISGS 191 + +VAP Sbjct: 180 VVNVVAPEGAG 190 >gi|313206746|ref|YP_004045923.1| LSU ribosomal protein l25p [Riemerella anatipestifer DSM 15868] gi|312446062|gb|ADQ82417.1| LSU ribosomal protein L25P [Riemerella anatipestifer DSM 15868] gi|315023817|gb|EFT36819.1| 50S ribosomal protein L25/general stress protein Ctc [Riemerella anatipestifer RA-YM] gi|325335815|gb|ADZ12089.1| Ribosomal protein L25 (general stress protein Ctc) [Riemerella anatipestifer RA-GD] Length = 202 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG +P + K +Y+ T Sbjct: 1 MKSITIQGQKRESVGKKSTKALRDAELVPCVVYG-GKEPLHFSTEEKSFKNLVYTPEAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ E + + +D Q P++D ++H DF Q+S+ V + VPVR +S G+ Sbjct: 60 --VSIEVNGETIPAVLQDIQFHPITDRILHVDFYQLSDDKPVVMEVPVRITG--RSRGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD I +D+ L+IG+ ++ DI+ P + M N + Sbjct: 116 AGGVLRQSFRKLKVKALPANLPDEIVIDVTKLRIGNKTYVGDIKSP-DYTFMHPDNAVVV 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|94971565|ref|YP_593613.1| 50S ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] gi|94553615|gb|ABF43539.1| LSU ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] Length = 233 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 3/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E ++A R GK AR +RK G +PA +YG DP + + K +SK L S+ Sbjct: 1 MAITENTVTAQSRKAGGKNDARRVRKTGMVPAAVYGAGKDPVAVTVDPKAVSKILRSETG 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TI L + V+ D+Q +P+ L+H D +++ + V VPV I + + G Sbjct: 61 HNTIFDLAVNGGAEKVMIVDWQYEPLKGKLLHVDLKRIAMDKVLRVSVPV--ILQGTAEG 118 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K GG L + EV + C +IP +I D+ LK GD++ ++D+ +K ++ + Sbjct: 119 VKNEGGILEQLIREVEIECLPADIPRAIFADVTPLKHGDNLRVKDLAHGDKLKFITDEDQ 178 Query: 180 TIATIV 185 +A + Sbjct: 179 MVAHVT 184 >gi|182414101|ref|YP_001819167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] gi|177841315|gb|ACB75567.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] Length = 272 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 102/192 (53%), Gaps = 6/192 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q +L+ R + G+ ++R LRK ++PAI+YG + P+ +++ A + ++ L + Sbjct: 1 MSQ-TFQLNVASRAQTGRSASRRLRKTNRVPAILYGKHTSPESLSVDAPEFTRLLKTIGA 59 Query: 61 MTTILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 T ++ L + + ++ Q DP++D +H DF +V +HV VR + E S Sbjct: 60 RTVLVELQQAGKTDKALSFLQEVQRDPMTDKFVHIDFQEVKADEKFEIHVTVRPVGE--S 117 Query: 119 PGIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K Q G L + HE+ + C ++P+++ VD+ +LK+G++I + ++ + Sbjct: 118 FGVKNQSGVLELNVHELRIRCLPKDLPEAVEVDVTELKVGETIKLGQLKPIAGVEFLDSK 177 Query: 178 NITIATIVAPIS 189 + + V P++ Sbjct: 178 GQPVVSCVEPVA 189 >gi|332878587|ref|ZP_08446307.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683488|gb|EGJ56365.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 198 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR GQ+P ++YG D + + +Y+ N T Sbjct: 1 MQSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-DVLHFSAPELAFAGIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+++ + I +D Q DPV+D +IH DF Q+++ +T+ VP++ + SPG+ Sbjct: 60 A--TIEVNGKSYTAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQI--QGTSPGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITI 181 GG L VV ++ + +N+PD I VD++ L++G+ +++ +LP E M N + Sbjct: 116 AGGTLRVVNRKLKIKALPDNLPDFIPVDISALEMGNRLYIT--KLPQENYKIMHPDNTVV 173 Query: 182 ATI 184 I Sbjct: 174 CQI 176 >gi|319399658|gb|EFV87912.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis FRI909] Length = 219 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + NIP++I VD+++L++ DS+ + D+++ + + +I T+V Sbjct: 121 VEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDVKISGDFTIENDPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|218441640|ref|YP_002379969.1| 50S ribosomal protein L25/general stress protein Ctc [Cyanothece sp. PCC 7424] gi|226736304|sp|B7KCY0|RL25_CYAP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218174368|gb|ACK73101.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7424] Length = 198 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 7/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + K + LR+ G IPA +YG+ ++ + + KD L + T Sbjct: 2 QVTIECQKRPEGSKPNT--LRRQGLIPAALYGHKGTESISLIIKEKDAQLLLKKASVNNT 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ ++I + ++ Q P + H F V+ + V VP+ + E S G+ Sbjct: 60 LVDVNIPDVPWSGKALIREVQTHPWKRFVYHLSFFSVAAHGKIDVVVPLNLVGE--SSGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + V E+S+ C +IP++I +D++ LKIGDSI + D++L E + + TI Sbjct: 118 KQGGIIEQVITEISVQCLPESIPETIEIDISPLKIGDSISVGDLQLSEGVTYLDDPTQTI 177 Query: 182 ATIVAPISGS 191 T++AP GS Sbjct: 178 LTVMAPKKGS 187 >gi|282865453|ref|ZP_06274504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] gi|282559497|gb|EFB65048.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] Length = 194 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 7/174 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ Q+P ++YG+ ++P + L D+ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRIRRANQVPGVVYGHGAEPVHVTLPGHDLLLALRTPN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q + + + H D L V G V V V V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRNAIKGDIEHVDLLTVKRGEKVNVEVAVHAEG-DLAPGA--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 L V + + + A +IP+S+TV + L G S+ +DI LP + Sbjct: 116 NLLEFVMNTLLVEAEATHIPESVTVSVAGLDAGASVLAKDIPLPSGSVLAEDPE 169 >gi|206602648|gb|EDZ39129.1| Ribosomal protein L25 [Leptospirillum sp. Group II '5-way CG'] Length = 207 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 7/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 1 MQNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSRGKA-TSLSLNLAHVQKAFHSHAGSH 59 Query: 63 TILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I E Sbjct: 60 AIFRLKVTGASDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIGETP 119 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GG L E+++ C +PD + VD + L + +S H+ D+ + Sbjct: 120 A-GVKLGGVLEHHVREITVECLPAAMPDHLKVDASTLSMNESFHVRDLPAMPGLRVLDNP 178 Query: 178 NITIATIVAPIS 189 + + I+ P + Sbjct: 179 DTVLVHILPPRT 190 >gi|308070285|ref|YP_003871890.1| 50S ribosomal protein L25 [Paenibacillus polymyxa E681] gi|305859564|gb|ADM71352.1| Probable 50S ribosomal protein L25 [Paenibacillus polymyxa E681] Length = 213 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 7/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L+A R + + R LR G+IPA++YG+ + P+ + AK+ +K + + + + Sbjct: 7 SIQLTAQPRTEKKGSAIRELRLKGRIPAVVYGSELEGTPVHVDAKEFNKVVRT--GRSEV 64 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + G E + VI KDYQ + +HADFL++S+ + V V + + + G K Sbjct: 65 FNLTVEGGETIPVIIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKT 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V EV + ++P +I VD++ L +GD + D++LP+ + +A+ Sbjct: 121 GGILQVQETEVEVEGLPADLPSTIEVDVSALDVGDKLSASDLKLPKGVTLHVPEEELLAS 180 Query: 184 IVAPIS 189 I+ P + Sbjct: 181 IIVPRA 186 >gi|302342165|ref|YP_003806694.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] gi|301638778|gb|ADK84100.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] Length = 202 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ L+A R+ GKG+AR +R G+IPA++Y + + + A+++ + L + Sbjct: 1 MKQIPLAAARRETTGKGAARQMRAAGKIPAVVYSAGKPAENLMVEAREVDRLLRQSGGGS 60 Query: 63 TILTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L+L + E + ++ Q D + +IH DF Q+ ++V P+ + E + G Sbjct: 61 AFLSLSVADEPARLAMLQEMQFDYLGKKVIHIDFHQIKADEEISVEAPIELVGE--AKGA 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG +N + V L +IPD++ VD++ L +GD+IH D+ LP+ + +S+ ++ + Sbjct: 119 AEGGLINQNLYSVLLRGRIADIPDAVVVDISGLDLGDNIHSTDLTLPQNVAMVSEESVLV 178 Query: 182 ATIVAPISGS 191 VAP +G Sbjct: 179 VACVAPNTGG 188 >gi|213962523|ref|ZP_03390785.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] gi|213954849|gb|EEB66169.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] Length = 199 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + I +D Q DPV+D +IH DF Q+++ +T+ VP++ E SPGI Sbjct: 60 AAIELN--GKTYDAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQI--EGTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + V+++ L++G+ +++ + E M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVNISGLEMGNKLYVTKLAQ-ENYKIMHPDNTVVC 174 Query: 183 TI 184 I Sbjct: 175 QI 176 >gi|212637894|ref|YP_002314414.1| 50S ribosomal protein L25/general stress protein Ctc [Anoxybacillus flavithermus WK1] gi|226736278|sp|B7GFH9|RL25_ANOFW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212559374|gb|ACJ32429.1| Ribosomal protein L25 (general stress protein Ctc) [Anoxybacillus flavithermus WK1] Length = 208 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + + +RK G IPA++YG ++ +P+ + A + K+L + T +L Sbjct: 5 LQLQLRTDHRRSYVKQMRKQGHIPAVLYGKTTNSQPVFVDAAEFLKQLRATGG-TGLLDA 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + +I +D Q P+ +IH DFL V + + VHVP+ + E + G+K GG L Sbjct: 64 KMNDNHIRIIVRDMQKHPIRHDIIHIDFLAVDAKTEIDVHVPIHLVGE--AAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 H++S+ +NIP SI VD+ +L++GD I + I+ IA+I+ P Sbjct: 122 QQAMHQLSIRVLPSNIPPSIDVDITNLQVGDVITVSHIQTNGAYEINHDPTEVIASILPP 181 Query: 188 I 188 Sbjct: 182 K 182 >gi|228472342|ref|ZP_04057108.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] gi|228276545|gb|EEK15269.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] Length = 198 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 97/182 (53%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR G++P ++YG S + A K +Y+ N T Sbjct: 1 MQSITIVGSQRESVGKAASKALRNAGKVPCVLYGGNS-TIHFSADALAFKKLIYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+++G + + I +D Q DPV+D +IH DF ++ + +T+ VP++ + +PG+ Sbjct: 60 A--TIELGGKTYNAILQDIQFDPVTDNIIHVDFYELHKDKEITLAVPIQIVG--TAPGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + N+PD + VD++ +++G+ +++ I EK M N + Sbjct: 116 AGGTLRIVNRKLKVKALPENLPDFVPVDISWMEMGNRLYITKIAQ-EKYKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|114565644|ref|YP_752798.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319178|sp|Q0B0S7|RL25_SYNWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114336579|gb|ABI67427.1| LSU ribosomal protein L25P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 209 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 103/186 (55%), Gaps = 5/186 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A R+ +G L+++ Q+PA+IYG + PI L +++ R+++ + + + Sbjct: 5 KLNARKREIKNRGYLNQLKRSEQVPAVIYGKGEEAVPIILEKREL-NRIFNVHGSRGLFS 63 Query: 67 LDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+I E + ++ Q +PVS LIH DFL V+ + +V V E + +K+G Sbjct: 64 LEIEGESKPMMTLIREIQRNPVSGQLIHLDFLSVNLNEKINSNVGVLLGGEEEV--MKKG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L EV +LC ++P+ ++ D++ L+IG+++H+ D+ +P +++ IA+I Sbjct: 122 GILQAGLKEVEVLCFPQDLPEYLSADISSLEIGETLHVADLIVPAGVEILTEAESVIASI 181 Query: 185 VAPISG 190 +AP Sbjct: 182 LAPSKA 187 >gi|329723963|gb|EGG60488.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU144] Length = 219 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 121 VEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|57866045|ref|YP_187735.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis RP62A] gi|282875431|ref|ZP_06284303.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|68053030|sp|Q5HRQ4|RL25_STAEQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57636703|gb|AAW53491.1| ribosomal protein L25 [Staphylococcus epidermidis RP62A] gi|281295788|gb|EFA88310.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|329733030|gb|EGG69369.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU028] gi|329737904|gb|EGG74132.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU045] Length = 219 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR +G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 121 VEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVVP 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|222152154|ref|YP_002561314.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] gi|222121283|dbj|BAH18618.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] Length = 216 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 99/184 (53%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A++R K KG +R G+IPA++YG + + + + K + + + Sbjct: 2 TSLKAIIRKGKQTKGELNKIRNEGKIPAVVYGYGASNTSVKVDEPEFVKVIR-EVGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ+DP+ + + H DFL ++ S +TV V V E + G+K+G Sbjct: 61 IELGVGSKAIKVMVSDYQIDPLKNKVTHIDFLAINMKSELTVDVVVNLTGE--AQGVKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + ++S+ + IP++I VD+ +L IGDSI + D++ + + ++ + I ++ Sbjct: 119 GVVQQPLFQLSVTATPDEIPETIEVDVTELNIGDSIMVGDLKADKAYTINNEDDEAIVSV 178 Query: 185 VAPI 188 V P Sbjct: 179 VPPT 182 >gi|119961664|ref|YP_947125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] gi|119948523|gb|ABM07434.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] Length = 191 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R GQIPA+IYG+ ++P I L + + + Sbjct: 1 MSEQKLTAELRTEFGKGFARRARMAGQIPAVIYGHGAEPIHINLPGRATTLAVR---VSN 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +D+ E + KD Q DPV I+ H D V G VTV + + E + Sbjct: 58 ALLAIDVDGEQHLTLVKDIQRDPVKQIIEHVDLQTVKAGEKVTVDIAIHVSGE-----VA 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G ++ VSL A ++P ++ V ++ LK G+SIH D+ LP+ ++ +++ + + Sbjct: 113 PGAVASLEATTVSLEAEATHVPTAVEVTIDGLKAGESIHASDLVLPKGSTLLTEGDTLVV 172 Query: 183 TI 184 I Sbjct: 173 RI 174 >gi|120405737|ref|YP_955566.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium vanbaalenii PYR-1] gi|119958555|gb|ABM15560.1| LSU ribosomal protein L25P [Mycobacterium vanbaalenii PYR-1] Length = 218 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A +R GKG++R R+ G++P ++YG+ ++P+ + L+ +D + L +LT Sbjct: 8 NLPAQVRTATGKGASRRARREGKVPVVLYGHGTEPQHLELNGRDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V G VTV V + + G Sbjct: 67 LDIDGTEQLALTKAIEVHPIRRNIQHADLLVVRRGEKVTVEVNIVIEGDATP-----GTL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + V + +IP+ V + + G I I LP + +S + IVA Sbjct: 122 VAQDANAVEIEADVQSIPEQFVVSVEGAEEGTQILAGQIELPSGVTLISDPETLVVNIVA 181 Query: 187 PISGS 191 + + Sbjct: 182 APTAA 186 >gi|16799320|ref|NP_469588.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria innocua Clip11262] gi|71153149|sp|Q92F64|RL25_LISIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16412672|emb|CAC95476.1| ctc [Listeria innocua Clip11262] gi|117957151|gb|ABK59047.1| Ctc [Listeria innocua] gi|117957159|gb|ABK59054.1| Ctc [Listeria innocua] gi|118723078|gb|ABL10242.1| general stress protein [Listeria innocua] gi|118723086|gb|ABL10249.1| general stress protein [Listeria innocua] gi|118723094|gb|ABL10256.1| general stress protein [Listeria innocua] gi|118723102|gb|ABL10263.1| general stress protein [Listeria innocua] gi|118723110|gb|ABL10270.1| general stress protein [Listeria innocua] gi|118723118|gb|ABL10277.1| general stress protein [Listeria innocua] gi|118723126|gb|ABL10284.1| general stress protein [Listeria innocua] gi|313621020|gb|EFR92141.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378] gi|313625452|gb|EFR95201.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023] Length = 207 Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|302345747|ref|YP_003814100.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] gi|302149597|gb|ADK95859.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] Length = 201 Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 99/189 (52%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIAL--SAKDISKRLYS 57 KE K++ R +GK +++ LRK G IP +YG P + ++ K +Y+ Sbjct: 1 MKEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + Sbjct: 61 PHIY--VVELIIDGERRTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|86140922|ref|ZP_01059481.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] gi|85832864|gb|EAQ51313.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] Length = 209 Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG +P +Y+ + T Sbjct: 1 MKSITITGSKRESVGKKATKALRNAGEVPCVLYGGD-EPVHFNAPEIAFKDLVYTPDAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TL++ I +D Q PV+D ++H DF Q+ EG VT+ +PV + E S G++ Sbjct: 60 A--TLELDGNTYMAILQDIQFHPVTDRILHIDFYQIFEGKEVTMTIPVHY--EGNSRGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD + D+ LKIGD +++ I E + N + Sbjct: 116 NGGVLRKTYRTLRVKALPKNLPDYVVADITKLKIGDKLYITGIEQGE-WKYLHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|319654945|ref|ZP_08009019.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] gi|317393370|gb|EFV74134.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] Length = 216 Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + LRK G IPA++YG+ + I LS D K + + + +L Sbjct: 5 LQAKERKGSRNSNLTSLRKEGNIPAVVYGSKLHSQSIYLSEADFLKTIK-EVGRNGVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+ DYQ +P+ + ++HADFL V +T V V + G+K GG + Sbjct: 64 DVDGSKHEVVLGDYQSNPIKNEIVHADFLAVDMNKEMTADVRVVLTG--DAAGVKDGGVM 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HEVS+ NNIP S+ VD+ +L++ +++ + DI+ ++ IA+I+ P Sbjct: 122 QQSMHEVSVTATPNNIPPSVEVDVTNLQVNETLTVADIKANRGYEINNEDEEVIASILPP 181 Query: 188 I 188 Sbjct: 182 R 182 >gi|163841717|ref|YP_001626122.1| 50S ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] gi|162955193|gb|ABY24708.1| LSU ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] Length = 229 Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG+AR R+ QIPA+IYG+ ++P IAL ++ + + Sbjct: 25 MSETKLAAQLRTEFGKGAARRARRANQIPAVIYGHGAEPIHIALPERET---IRAARGAN 81 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI E + KD Q DPV I+ H D L V G VTV +PV E + Sbjct: 82 ALLTLDINGEEHLALVKDIQRDPVLQIIEHIDLLTVRRGEKVTVDIPVVLTGE-----VA 136 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G +N + +S+ A ++P S+ V + G+ + DI LP+ S ++ IA Sbjct: 137 PGAVVNQDANTISVEAEATHLPSSLEVSIEGRNPGEHVFASDIVLPQGVSLLADAETLIA 196 Query: 183 TIVAP 187 I P Sbjct: 197 NISEP 201 >gi|288803707|ref|ZP_06409136.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] gi|288333796|gb|EFC72242.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] Length = 201 Score = 180 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 99/189 (52%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIAL--SAKDISKRLYS 57 KE K++ R +GK +++ LRK G IP +YG P + ++ K +Y+ Sbjct: 1 MKEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + Sbjct: 61 PHIY--VVELIIDGERRTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|315193864|gb|EFU24258.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS00] Length = 213 Score = 180 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 97/182 (53%), Gaps = 4/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LRK+G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIR-EVGRNGVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+VA Sbjct: 121 VEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVVA 180 Query: 187 PI 188 P Sbjct: 181 PT 182 >gi|302542981|ref|ZP_07295323.1| ribosomal protein L25, Ctc-form [Streptomyces hygroscopicus ATCC 53653] gi|302460599|gb|EFL23692.1| ribosomal protein L25, Ctc-form [Streptomyces himastatinicus ATCC 53653] Length = 199 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 9/185 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R + GKG+AR R ++P ++YG+ ++P + L A D+ L + N + Sbjct: 3 EVKIPAKPRTEFGKGAARRTRMADRVPGVVYGHGAEPLHVTLPAYDLLMALKTPN---VL 59 Query: 65 LTLDI-GKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L L++ G + VIPK Q P+ IL H D L VS+G VTV +P+ + +PG Sbjct: 60 LRLEVEGGKSELVIPKAVQRHPIKIGILEHVDLLLVSKGEKVTVELPINVEG-DLAPGA- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+ +T+ + L GD+++ +DI LP+ T+ + + + Sbjct: 118 --NLLEYVLNTLPVETEATHIPEGVTISIAGLDAGDTVYAKDISLPKGTTLAVEDDAPVL 175 Query: 183 TIVAP 187 IV P Sbjct: 176 HIVTP 180 >gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] Length = 193 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 2/163 (1%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P I++G ++P PI + ++ KRL + F +T+ L + E V VI +D Q D V Sbjct: 1 MVPGIVFGGDAEPLPINIPFNELFKRLKAGRFKSTLFNLKVEGQEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ + + + +P+ F NE + P IK+GG L V +E+ L+ A +IPD+I Sbjct: 61 DLPTHLDLMRLRRTTKINLFIPLDFTNEEECPAIKKGGVLTTVRNEIELIVTAGDIPDAI 120 Query: 148 TVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL ++ IGD+I + I LP+ + + I + AP S Sbjct: 121 EVDLTKIENIGDTITISMIDLPKGAKPTIERDFVICNVSAPSS 163 >gi|310643470|ref|YP_003948228.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Paenibacillus polymyxa SC2] gi|309248420|gb|ADO57987.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus polymyxa SC2] Length = 213 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 7/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L+A R + + R LR G+IPA++YG+ + P+ + AK+ +K + + + + Sbjct: 7 SIQLTAQPRTEKKGSAIRGLRLKGRIPAVVYGSEIEGTPVHVDAKEFNKVVRT--GRSEV 64 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + G E + VI KDYQ + +HADFL++S+ + V V + + + G K Sbjct: 65 FNLTVEGGETIPVIIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKT 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V EV + +++P +I VD++ L IGD + D++LP+ + +A+ Sbjct: 121 GGILQVQETEVEVEGLPSDLPSTIEVDVSALDIGDKLSASDLKLPKGVTLHVSEEELLAS 180 Query: 184 IVAPIS 189 ++ P + Sbjct: 181 VIVPRA 186 >gi|288926807|ref|ZP_06420716.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] gi|288336436|gb|EFC74813.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] Length = 201 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIAL--SAKDISKRLYS 57 KE ++ R +GK ++RLLRK G +P +YG P ++ ++ K +Y+ Sbjct: 1 MKEINVTGQKRTDLGKKASRLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + Sbjct: 61 PHIY--VINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLDIATSK 175 Query: 178 NITIATI 184 + + +I Sbjct: 176 EVVVCSI 182 >gi|116871593|ref|YP_848374.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740471|emb|CAK19591.1| ribosomal 50S general stress protein L25/Ctc [Listeria welshimeri serovar 6b str. SLCC5334] Length = 207 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTKLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPNNKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|16802257|ref|NP_463742.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes EGD-e] gi|46906443|ref|YP_012832.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes serotype 4b str. F2365] gi|47093153|ref|ZP_00230928.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|47096204|ref|ZP_00233803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|217965703|ref|YP_002351381.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|224500338|ref|ZP_03668687.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes Finland 1988] gi|224503469|ref|ZP_03671776.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL R2-561] gi|226222840|ref|YP_002756947.1| general stress protein [Listeria monocytogenes Clip81459] gi|254825875|ref|ZP_05230876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|254829302|ref|ZP_05233989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|254832468|ref|ZP_05237123.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 10403S] gi|254854441|ref|ZP_05243789.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|254901004|ref|ZP_05260928.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes J0161] gi|254913928|ref|ZP_05263940.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|254933051|ref|ZP_05266410.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|254938281|ref|ZP_05269978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|254992856|ref|ZP_05275046.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-064] gi|255026020|ref|ZP_05298006.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-003] gi|255028168|ref|ZP_05300119.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes LO28] gi|255520467|ref|ZP_05387704.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-175] gi|284803050|ref|YP_003414915.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284996191|ref|YP_003417959.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290894281|ref|ZP_06557248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|300766344|ref|ZP_07076303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|71153150|sp|Q724K2|RL25_LISMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153151|sp|Q8YAD3|RL25_LISMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16409576|emb|CAD00738.1| ctc [Listeria monocytogenes EGD-e] gi|46879707|gb|AAT03009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes serotype 4b str. F2365] gi|47015452|gb|EAL06386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|47018460|gb|EAL09218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|118420012|gb|ABK88268.1| general stress protein Ctc [Listeria monocytogenes] gi|217334973|gb|ACK40767.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|225875302|emb|CAS03999.1| Putative general stress protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601715|gb|EEW15040.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|258607841|gb|EEW20449.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|258610892|gb|EEW23500.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|284058612|gb|ADB69553.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284061658|gb|ADB72597.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290556165|gb|EFD89712.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|293584609|gb|EFF96641.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|293591946|gb|EFG00281.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|293595114|gb|EFG02875.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|300512943|gb|EFK40031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|307569750|emb|CAR82929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes L99] gi|328467967|gb|EGF38994.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 1816] gi|328469739|gb|EGF40661.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 220] gi|332310620|gb|EGJ23715.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A] Length = 207 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|304316109|ref|YP_003851254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777611|gb|ADL68170.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 200 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + + K+ Sbjct: 1 MQNVELEAVLRVP-GKNAARKLKEKGYIPAILYGKGMESIPLAVETGKL-RTIVQKHGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L + I KD Q D ++ LIH DF +VS + VP++ Sbjct: 59 VLLNLVVNGATHQAILKDEQRDELTGKLIHIDFQRVSMNEKIEAAVPLKLEGVGVIE--S 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G + E+++ ++PD I VD+++LKIGD++ ++D+ +PE + + I Sbjct: 117 KGLLVQHQKWELNVESLPTSLPDEIVVDVSNLKIGDTLFVKDVNVPEGVEKVDDPDEVIL 176 Query: 183 TIVAPISG 190 TIVAP + Sbjct: 177 TIVAPKNA 184 >gi|227501529|ref|ZP_03931578.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] gi|227077554|gb|EEI15517.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] Length = 221 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ + A R GKG AR LR++ ++P +IYG+ +P A+ DI + + N Sbjct: 1 MAERPI-IKAEPRTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDIQSLVRN-NG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K+ + ++ + H D L + G V V VP+ E+ +PG Sbjct: 59 VNAVLELEIEGEQYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGES-APG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +V+ + NIP+ I + + L+ G+ I DI +PE T+ ++ Sbjct: 118 TMHIQDADVLM----VEADVLNIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETV 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 ILSITLP 180 >gi|296140892|ref|YP_003648135.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] gi|296029026|gb|ADG79796.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 6/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG+AR R++G +P ++YG+ ++P+ + + A+D + L K+ +L+ Sbjct: 6 KLTASVRTEFGKGAARRTRRDGLVPVVLYGHGTEPQHLTVVARDFATILR-KDGTNAVLS 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + + H D L + +G VTV VPV E G G + Sbjct: 65 LDIDGKEQLALTKQVVVHPLRNYIEHTDLLVIKKGEKVTVSVPVIV--EGDPAG---GTQ 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +EV + A +IP++I V++++L++G I + +P + ++ I I Sbjct: 120 VAQDLNEVEIEADALSIPENIVVNVHNLEVGTQIAAGQLEVPAGVTVLTDPEALIVNIT 178 >gi|271969795|ref|YP_003343991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] gi|270512970|gb|ACZ91248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] Length = 199 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E + A R++ GKG+AR +R+ ++P ++YG+ +DP+ + L ++ L + N Sbjct: 1 MSEVVIKAESRNEFGKGAARKIRRENKVPVVLYGHGTDPQHLTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G +PK Q DP+ L H D L V G VT+ +PV + E Sbjct: 58 VLIRLE-GAAAELALPKGVQRDPIRGFLEHVDLLLVKRGEKVTIDIPVTVVGEVAD---- 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G L+ VS+ A +IP + VD+ ++IG D++LPE TS ++ + Sbjct: 113 --GILDQQLVSVSVESEATHIPTGVEVDVEGMEIGTQFTAGDLKLPEGTSLIADPETLVL 170 Query: 183 TI 184 + Sbjct: 171 HV 172 >gi|158319104|ref|YP_001511611.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139303|gb|ABW17615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 191 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG 70 +R VGK S+ LR+ G +PA+IYG+ + PI L ++ + + + N ++TL+I Sbjct: 8 EVRKNVGKNSSHRLREKGYVPAVIYGSNINTIPIELDHNEVQECIRNNNG-GGLVTLNID 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + V K+ Q DPV+ +IH DF QV + + V VP+ KS + G L Sbjct: 67 ENDYTVFIKEIQKDPVTGNIIHLDFQQVDQNEKIHVLVPIILKG--KSNIKRSGSILQQQ 124 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ + C ANNIP ++ VD++ K GD++ + D+ E+ S + IA++ Sbjct: 125 LRDLEVECSANNIPKALEVDISHFKPGDTLKVGDVEFGEEISIVHDAESIIASVA 179 >gi|332666097|ref|YP_004448885.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] gi|332334911|gb|AEE52012.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] Length = 199 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ R +GK ++ LR +G+IP ++YG D +++ D+ +Y+ +F Sbjct: 1 METIAITGQSRTGLGKKPSKDLRNDGRIPCVLYG-GQDVVHFSVTLNDVKNLIYTPDF-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L + I KDYQL P++ L H DFL + EG V + VPVR SPG+K Sbjct: 58 RVANLTVDGATYRCIVKDYQLHPLTSQLTHIDFLSLVEGQKVKLEVPVRTKG--VSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + + + +D+ + +G S+ + DI +PE ++ +I + Sbjct: 116 LGGKLQIKLRRAKVKTLPEQMVTELYIDITSMDLGHSLRVRDIIVPEGIELLNAPSIPVV 175 Query: 183 TIVAPIS 189 TI P + Sbjct: 176 TIEIPRA 182 >gi|205371997|ref|ZP_03224815.1| 50S ribosomal protein L25 (general stress protein Ctc) [Bacillus coahuilensis m4-4] Length = 214 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L+A R+ + LR G IPA++YG+ D I + K + + Sbjct: 1 MSN---QLTATKREGFKRSDLTSLRNQGSIPAVVYGHKMDSTSIMIDEPSFIKTMR-EVG 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ L + V+ DYQ DP+ D ++HADFL ++ + V + + + G Sbjct: 57 RNGIINLLVDGNKTQVVLTDYQRDPIKDEVVHADFLAINMSEDMEASVRIDLVG--DAAG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG + HE+S+ + PDSI VD+ +L++G++I + DIR + ++T Sbjct: 115 VKDGGVMQQPLHEISVTAKPQDFPDSIKVDVENLQVGETITVGDIRQQFSYELNLEDDVT 174 Query: 181 IATIVAPI 188 +A+I+AP Sbjct: 175 VASILAPR 182 >gi|307151053|ref|YP_003886437.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] gi|306981281|gb|ADN13162.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] Length = 191 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + K +A LR+ G IPA +YG+ ++ + + KD L + T Sbjct: 2 QVTIECQKRPEGSKPNA--LRRQGLIPAALYGHKGTESISLTVKEKDAQVLLKKASVNNT 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ ++I + ++ Q+ P + H F V+ + V VP+ + E + G+ Sbjct: 60 LVDVNIPDVPWSGKALIREVQIHPWKRSVYHLSFFSVAAHGKIEVVVPLHLVGE--AAGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + V +++ C +IP++I +DL L IGDS+ + D++LPE + + + I Sbjct: 118 KQGGLIEQVISSIAVDCLPESIPEAIDIDLGPLGIGDSVSIGDLKLPEGVTCLDDPSQLI 177 Query: 182 ATIVAPISGS 191 +++AP G Sbjct: 178 LSVIAPRKGG 187 >gi|150024258|ref|YP_001295084.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium psychrophilum JIP02/86] gi|166223680|sp|A6GVZ1|RL25_FLAPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149770799|emb|CAL42264.1| 50S ribosomal protein L25 [Flavobacterium psychrophilum JIP02/86] Length = 203 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG P + + +Y+ N T Sbjct: 1 MKSITIKGSERESVGKVATKALRNAGAVPCVLYGGDQ-PVHFSADERAFKSLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ G + + + +D Q+ PV+D ++H DF Q+ E VT+ VPVR I SPG+ Sbjct: 60 VVIEVE-GGKSYNAVMQDIQVHPVTDKILHLDFYQLFEDKEVTMEVPVRIIG--TSPGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD + D++ L++G+ I++ + EK + N + Sbjct: 117 LGGVLRLNSRKLKVKALPANLPDFLDADISPLEMGNKIYVTALAN-EKYKILHPENTVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter oxydans 621H] gi|68053025|sp|Q5FRT8|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H] Length = 218 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 3/167 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQL 83 R+ G +PA+IYG +P IAL + I K L+ + + + L E V + +D QL Sbjct: 24 RREGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV+D IH DF +V+ G+ V V V + F+ E KSPGIK+GG LNVV H V + NI Sbjct: 84 HPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVLNVVRHYVDVQADPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIATIVAPI 188 P+ T +L+ L I D++ D++ E S ++ IA+I AP Sbjct: 144 PEHFTAELSGLDIHDNVRWTDLKGTEGVVLGSGQAADMVIASIAAPT 190 >gi|198283910|ref|YP_002220231.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666710|ref|YP_002426544.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248431|gb|ACH84024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518923|gb|ACK79509.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++A R+ +G+ ++R LR+ G +PA++YG+ I + A+ + K L + T + Sbjct: 3 DFAIAAQPREDIGRRASRRLRRTGMVPAVLYGDGKAAMGICIEARLLRKLLPDERAYTHV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL + + +D Q+ P + ++H DFL+V G V +HVPV F+NE+ GIK G Sbjct: 63 ITLQLPGSKETALIRDIQMHPYKEEVLHMDFLRVHAGEQVRLHVPVHFLNESTCAGIKAG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G L+ EV + P + +P+++ VD+ L IGDS+H+ I +P + + + + + Sbjct: 123 GVLHRALVEVEVEAPVDRLPEALQVDIAGLHIGDSLHLSQISVPAGVTLVPLLHEDDKEV 182 Query: 182 ATIVAPISG 190 +I P +G Sbjct: 183 VSIHNPRTG 191 >gi|217967173|ref|YP_002352679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] gi|226736311|sp|B8DZY2|RL25_DICTD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217336272|gb|ACK42065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] Length = 207 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ RDK+GK A+ R++ IP ++YG ++ + I + KD+ + + Sbjct: 1 MEITEIKVKKRDKIGKQFAKKYRRSNLIPGVVYGAHLKENIHILVEKKDLWSLIKKGHAK 60 Query: 62 T-TILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 +L L I + I +D Q+DP+ D +H DF ++ V V+VP+ + E Sbjct: 61 EQHLLRLIIENGENTITENAILQDLQIDPIKDEFLHVDFHAITLEELVDVYVPILLVGE- 119 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + GIKQGG L E+ + ++P I VD+ DL+IG+SI + D++ PE ++ Sbjct: 120 -AKGIKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGESITVGDLKFPENIKVLTP 178 Query: 177 LNITIATIVAPIS 189 L+ + I+ P Sbjct: 179 LDEVVVGIIPPKG 191 >gi|304382452|ref|ZP_07364950.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] gi|304336405|gb|EFM02643.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] Length = 207 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 99/188 (52%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG------NMSDPKPIALSAKDISKRLY 56 KE +S +R +GK +++LLRK G IP +YG + + + D+ K +Y Sbjct: 1 MKEINVSGQVRTDLGKKASKLLRKEGLIPCNLYGEARNEKGLPEAFSFVIPMVDLRKLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ +DI + I K+ Q PV+D L+H DF +++E +TV +PV+ Sbjct: 61 TPHIY--VVNIDIDGKAHKAILKELQFHPVTDALLHVDFYEINEEKDITVGIPVKLTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ L+IG SI + + E ++ Sbjct: 117 LAQGVRDGGRMNLSIRKINVRAPYKRIPEQLEIDVTPLQIGKSIKVGQLNF-EGLEIVTS 175 Query: 177 LNITIATI 184 + + ++ Sbjct: 176 KEVIVCSV 183 >gi|167753867|ref|ZP_02425994.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] gi|167658492|gb|EDS02622.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] Length = 191 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ AV R+ GK +A+ +R+ GQIPA++YG + ++ ++I +Y+ N Sbjct: 1 MKTIQVKAVKRENYGKKAAKAVRREGQIPAVLYGGG-ETVSFSVDPREIKPLIYTPNSY- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L+I + + +D Q P+ + ++H DF +V G V + +PVR + G+K Sbjct: 59 -IVDLEIDGKTEKAVLRDVQFHPIREEILHMDFYRVQPGKPVAISIPVRLTG--NAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++++ + +PD + +D+ L +G +I + D+ + ++ + Sbjct: 116 IGGKLVLSARKLTVSAQLDKLPDELVIDVTPLGVGKTIFVGDLNF-DGVKFLTPATTAVC 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|262197679|ref|YP_003268888.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] gi|262081026|gb|ACY16995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] Length = 206 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 KL+ R+ GK AR LR G++P I YG+ + P + + L T++ Sbjct: 5 KLTVKRRNITGKSMARKLRTQGRLPGICYGSGVEQPIMLDFDGRAFRASLDPTKRQNTVI 64 Query: 66 TLDIG-----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + + V+ KDYQ+DP+ L H DF+ V S VT VP+ F KS G Sbjct: 65 DLTVEDDAGAGQSFPVMVKDYQIDPIRRELTHVDFITVDTSSEVTAEVPLEFTG--KSKG 122 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GG L+VV HE+ + C +IP I +D++DL D IH+ D++LPE + + +T Sbjct: 123 VELGGTLHVVRHELEVRCKPADIPSKIVIDISDLDTNDVIHVRDLKLPEGVFASTAEQLT 182 Query: 181 IATIVA 186 I T V Sbjct: 183 IITCVP 188 >gi|332703820|ref|ZP_08423908.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] gi|332553969|gb|EGJ51013.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] Length = 207 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E +LS R +VGKG R +R G +P I Y + P+ + ++K LY K Sbjct: 1 MSN-ENQLSVEKRVRVGKGPVRDVRAEGFVPGIYYDAKGENIPVKVREVPLTK-LYEKVG 58 Query: 61 MTTILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + TL I E V ++H DF V + V VPV Sbjct: 59 KAHVFTLKIESEGQITEKPVFIWQISRHAYKKQIMHVDFYGVDLNKPIRVMVPVNVTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-S 175 K+PG+ GG + + ++ L C IP+++TVD++ + I D++H+ + LP+ ++ Sbjct: 117 KAPGLILGGVVQIFRDKIELECLPLEIPETVTVDVSSMNINDTVHISSLPLPQGVKAVYG 176 Query: 176 QLNITIATIVAPIS 189 N + +V P S Sbjct: 177 DDNFAVVGVVPPAS 190 >gi|300790048|ref|YP_003770339.1| 50S ribosomal protein L25 [Amycolatopsis mediterranei U32] gi|299799562|gb|ADJ49937.1| large subunit ribosomal protein L25 [Amycolatopsis mediterranei U32] Length = 199 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 6/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + ++ + +N Sbjct: 1 MSEVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFARVVR-ENGSN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TLD+ + + K + P+ + + H D L V G + V VPV Sbjct: 60 AVITLDLEGSVELALTKTIVVHPLKNYIEHVDLLVVKRGEKIVVDVPVVVTGNPGP---- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG +N + + A +IP+ V + L+IG + + LP+ + ++ + Sbjct: 116 -GGLVNQDVDTLQVEVEALHIPEQFEVSIEGLEIGSQVLAGQVELPQGATLVTDPESLVV 174 Query: 183 TIVAP 187 + P Sbjct: 175 AVNEP 179 >gi|296169883|ref|ZP_06851495.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895439|gb|EFG75141.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 222 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLTATVRTETGKGASRRARREGKIPAVLYGHGADPQHLELPGHDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V G V V V V + G Sbjct: 67 LDIDGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVVVEVRVVIEGDAVP-----GTL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + D + G I LP+ + +S + + +V Sbjct: 122 VTQDTNTIEIEADALSIPEQLTVSIEDAEPGTQFTAGQITLPKGVNLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|255020869|ref|ZP_05292925.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] gi|254969660|gb|EET27166.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] Length = 209 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A RD G+ +R LR+ GQ+PA++YG+ P++L A+ + K L + Sbjct: 1 MTDVQFSIPARERDGHGRRPSRRLRREGQVPAVLYGDGKPANPLSLEARVLRKLLADERV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ++TL+ + +D Q+ P + ++H DFL+V G VT+HVP+ F NE G Sbjct: 61 FTNVITLEFPDRKETALIRDLQMHPYKEEVLHVDFLRVHAGERVTLHVPIHFENEATCVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 +K GG L+ EV + P +P++I VD+ L++G+SIH+ I +P + Sbjct: 121 VKSGGVLHRALVEVEVEAPVGQLPEAIVVDIAQLQVGESIHLSQITVPAGVKLVPLSHDD 180 Query: 178 NITIATIVAPISGS 191 + + ++ + +G+ Sbjct: 181 DKEVVSVHSARTGA 194 >gi|315223765|ref|ZP_07865615.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] gi|314946340|gb|EFS98339.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] Length = 199 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + + I +D Q DPVSD +IH DF Q+ + +T+ VP++ E SPGI Sbjct: 60 AAIELN--GKTYNAILQDIQFDPVSDKIIHIDFYQLQKDKEITIEVPIQI--EGTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + VD++ L++G+ +++ + + M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYVTKLAQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|288799717|ref|ZP_06405176.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] gi|288332965|gb|EFC71444.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] Length = 199 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-----NMSDPKPIALSAKDISKRLYS 57 KE L+ +R +GK +++ LRK G IP +YG + ++ K +Y+ Sbjct: 1 MKEINLTGQLRSDLGKKASKSLRKEGLIPCNMYGIATTDGKPSAFSFTVPMTELRKLIYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L + +L I K+ Q PV+D ++H DFL+V+E +T+ +PV+ + Sbjct: 61 PHIY--LVNLTVDGKLHTAILKEIQFHPVTDSVLHVDFLEVNEEKPITIGLPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + GI+ GG++++ ++++ P ++P+ + VD+ L IG SI + + E ++ Sbjct: 117 AQGIRDGGRMSLSLRKLNVKAPYKSLPEHLDVDVTALTIGKSIKVGQLSY-EGLELVTGK 175 Query: 178 NITIATI 184 ++ + +I Sbjct: 176 DVVVCSI 182 >gi|183601573|ref|ZP_02962943.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219683892|ref|YP_002470275.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis AD011] gi|241190928|ref|YP_002968322.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196334|ref|YP_002969889.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219179|gb|EDT89820.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219621542|gb|ACL29699.1| ribosomal protein L25, Ctc-form [Bifidobacterium animalis subsp. lactis AD011] gi|240249320|gb|ACS46260.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250888|gb|ACS47827.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793917|gb|ADG33452.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis V9] Length = 208 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 9/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R +IPA IY P + L ++ S L N Sbjct: 1 MANNSIVLEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + + KD Q +PV I+ H DF +V G + V VPV Sbjct: 60 --ALFTIKFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPVFVEGTP---- 113 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 K G V E+ + +N+P+ I V + L+ GD+I D+ LPE ++ Sbjct: 114 -KGGAIAVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPEGVELDIADPEE 172 Query: 180 TIATIVAP 187 ++ TI P Sbjct: 173 SVVTIEIP 180 >gi|281356645|ref|ZP_06243136.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] gi|281316772|gb|EFB00795.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] Length = 209 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +++ R GK ++R RK GQIPA +Y + K + A D K L + + Sbjct: 1 MSNVSNEIAVQERKDFGKNASRRARKAGQIPASVYSKGKESKSFLVDA-DAWKVL-TGHH 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++TL G +H + K+ Q + + + + H DF +V + VPV E S G Sbjct: 59 GSHMVTLKNGDAEIHALIKEVQFNYLKNYVYHIDFQEVDMDKEIVAAVPVHAHGE--SVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 GG L HE+ ++C ++P+++T D+ L G+ + ++D+ LP+ + Sbjct: 117 AAHGGILEQELHELEVICRPADLPEAVTADVTKLDKGEHLCVKDLVLPQGVRTEVDGETI 176 Query: 181 IATIVAPI 188 + + P Sbjct: 177 VFHVGLPK 184 >gi|15612630|ref|NP_240933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus halodurans C-125] gi|68053238|sp|Q9KGJ4|RL25_BACHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|10172679|dbj|BAB03786.1| 50S ribosomal protein L25 [Bacillus halodurans C-125] Length = 215 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +RK G +PA++YGN + +PI++ A D K + + ++ Sbjct: 3 MSLKAEKRPDLRGSVTRKIRKQGYVPAVVYGNKTKSQPISVEAVDFLKTVR-EVGRNGLI 61 Query: 66 TLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +L++ V+ D Q+DP+ +H DF +V S + +VPVR E + G+ +G Sbjct: 62 SLEVEKGTKHQVMVHDLQMDPLKGDYLHIDFFEVDMSSEIEANVPVRLTGE--ARGVSEG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+ + +E+++ +IP+ IT+D++ L IGDSI + D+R +++ T+ T+ Sbjct: 120 GVLSQLMYEITVRSLPADIPEEITLDVSSLAIGDSIQIRDVRGNVPVQVVNEDEETVVTV 179 Query: 185 VAP 187 P Sbjct: 180 QPP 182 >gi|254500889|ref|ZP_05113040.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] gi|222436960|gb|EEE43639.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] Length = 176 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 1/158 (0%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 IYG+ PI + K+ + L+ F+T I T+D+ E VI KD+QL PV D ++H Sbjct: 2 IYGDKKPALPITIPVKETTLTLHKGGFLTHIGTIDVDGEKHQVIAKDFQLHPVRDDVLHV 61 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLND 153 DFL+VS +T+TV +PV FINE PG+K+GG LNVV H V L+ PAN IP+++ DL Sbjct: 62 DFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELIVPANAIPETLVFDLAK 121 Query: 154 LKIGDSIHMEDIRLPEKTSS-MSQLNITIATIVAPISG 190 + IGD++H+ LPE ++ + T+AT+ AP G Sbjct: 122 VDIGDTLHISATTLPEGAQPTITDRDFTVATLAAPGGG 159 >gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata obscuriglobus UQM 2246] Length = 216 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + G +A LRK G +PAI+YG+ +A++AK++ + + ++ Sbjct: 1 MSA-SVTLKTTARAETGSRAAARLRKQGLVPAIVYGHKQANVSLAVNAKELDQAIRVQH- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + V+ ++ Q D + +IH DF + V V VPV N K+ G Sbjct: 59 -ARVLDLDIEGKTETVLIRELQWDYLGKEMIHVDFERKDRAELVRVSVPVALKNAPKATG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 GG L+ H + + CP IP+SI +D+ +L +G IH+ D+ LP + Sbjct: 118 ---GGVLDQPFHALHVECPLGAIPESIAIDITNLTLGHPIHIRDLALPPGVKVLDAPEGV 174 Query: 181 IATIVAP 187 + + P Sbjct: 175 VVQLKLP 181 >gi|298530961|ref|ZP_07018362.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] gi|298508984|gb|EFI32889.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] Length = 216 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 7/187 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +R++ GK +AR LRKN +P + Y + + P+ + K +++ T ++ Sbjct: 5 YNLKVEVRNEKGKSAARKLRKNDYVPGVYYDSSGETLPLKVRNGPFYKA-WNQVGTTNVV 63 Query: 66 TLDIG--KELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L+ E + P + +H DF V VT+ VPV K G Sbjct: 64 ELEYTHSGETHRKPCLIWSIDRHPYKKVYMHVDFYGVDLTKEVTIAVPVEVKGTPK--GA 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG + + + L C NIP +T+D++ L IGD+I++ED+++P + N + Sbjct: 122 EDGGIMRIFRQTLDLTCLPANIPSQVTIDVSKLDIGDNIYIEDLKMPAGAKVTFEENFAV 181 Query: 182 ATIVAPI 188 +V P+ Sbjct: 182 VGLVPPM 188 >gi|303238070|ref|ZP_07324611.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] gi|302481766|gb|EFL44820.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] Length = 200 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIAL--SAKDISKRLYS 57 K+ ++S R+ +GK +++ LRK G IP +YG + + P +A ++ K +Y+ Sbjct: 1 MKQIQISGKKREIIGKKASKELRKEGLIPCNLYGEVKEDGKPVALAFASPMAELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q P +D ++H DF +V+E + + VPV+ Sbjct: 61 PHIY--VVELTIDGEKRLAVMKEIQFHPTTDAVLHIDFYEVNETKPIVMGVPVKHTG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P ++IP+++ +D+ +L+IG SI + D+ E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYSHIPETLEIDVTNLRIGKSIKVGDLSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|256820643|ref|YP_003141922.1| 50S ribosomal protein L25/general stress protein Ctc [Capnocytophaga ochracea DSM 7271] gi|256582226|gb|ACU93361.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Capnocytophaga ochracea DSM 7271] Length = 199 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + + I +D Q DPVSD +IH DF Q+ + +T+ VP++ E SPGI Sbjct: 60 AAIELN--GKTYNAILQDIQFDPVSDKIIHIDFYQLHKDKEITIEVPIQI--EGTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + VD++ L++G+ +++ + + M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYVTKLAQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|332971074|gb|EGK10044.1| 50S ribosomal protein L25 [Desmospora sp. 8437] Length = 223 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++ +R K + LR+ G++PA++YG + + I L A + K L + + I L Sbjct: 23 IAVTIRQKYPRSLLTKLRREGRVPAVVYGKGMENELIHLEAGQVIKMLQQE-GTSAIYEL 81 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 G + V+ ++ Q D + D +IH DF +V + V + E G+K+GG Sbjct: 82 QYPGGKSRQVMIRELQQDRIKDKIIHIDFNEVKLDEPIDTEVYIELTGEPT--GVKEGGI 139 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V + C ++PD + ++ L IGD++ ++ +P++ ++ +AT++ Sbjct: 140 LQHQLRSVEVRCLPADLPDRLEGEITHLAIGDTLTAAELPIPDRVELLTDPEEMVATVLP 199 Query: 187 PI 188 P Sbjct: 200 PR 201 >gi|315608437|ref|ZP_07883425.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] gi|315249897|gb|EFU29898.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] Length = 201 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 100/187 (53%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIAL--SAKDISKRLYS 57 KE ++ R +GK +++LLRK G +P +YG P ++ ++ K +Y+ Sbjct: 1 MKEINVTGQKRTDLGKKASKLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + Sbjct: 61 PHIY--VINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLDIATSK 175 Query: 178 NITIATI 184 + + +I Sbjct: 176 EVVVCSI 182 >gi|325105366|ref|YP_004275020.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] gi|324974214|gb|ADY53198.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] Length = 196 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR +G++PA++YG + A+ A + +YS + Sbjct: 1 MKTIAISGSSRENVGKRDAKELRYDGKVPAVLYG-GKEQIHFAVDAPALRDLVYSADVHF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L++ I +D Q P+++ ++H DFLQ+ + +T+ +PV+ SPG+K Sbjct: 60 A--ELEVNGSKYKAILQDIQFHPLTEKILHVDFLQLFDDKKITMEIPVKLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P + V L L++G S + D++ PE + TI Sbjct: 116 VGGKLVQKLRKLKVNALPKDMPQYVEVSLEPLEVGKSTRVRDLK-PEGYLITNVGEDTIV 174 Query: 183 TIV 185 +++ Sbjct: 175 SVI 177 >gi|325286677|ref|YP_004262467.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] gi|324322131|gb|ADY29596.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] Length = 203 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G +P ++YG P + +Y+ N T Sbjct: 1 MKSITITGSKRESVGKKATKALRNAGMVPCVVYG-GEQPLHFSAPELAFKDLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ E V+ + +D Q PVSD +IH DF Q+ + VT+ +PVR + SPG++ Sbjct: 60 VVIDLE-NGEKVNAVIQDIQFHPVSDRIIHIDFYQLFDDKAVTMDIPVRLVG--NSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ +PD VD+N LKIG +I + + + + + + N + Sbjct: 117 NGGRLLFRKRKLTIKALPAKLPDFFDVDINKLKIGGNIAVSSL-VNDDFTILHPDNTVVV 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|223936333|ref|ZP_03628245.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] gi|223894851|gb|EEF61300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] Length = 245 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L+A R +G A+ LR +G+IPA+IYG + + +++KDI ++ Sbjct: 1 MKSVALNAFPRVMARRGGAKKLRDSGRIPAVIYGRQQQAQNLEVNSKDIENLIHHSVSEN 60 Query: 63 TILTLDIGKE---LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L + + + ++ Q P++ ++H DF +V+E VT+ VPV E + Sbjct: 61 LLVDLAVKDDSRPKRLALVQEVQHHPLNGKMLHVDFHEVAENERVTIMVPVEATGE--AV 118 Query: 120 GIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG L V ++ + ++P+ I VD+++L+IG +IH+ DI+ PE + + Sbjct: 119 GVKTGGGVLEHVLFKIKVRALPKDLPEVIAVDVSNLEIGQAIHIGDIKAPEGVEVLGDKH 178 Query: 179 ITIATIVAPI 188 I++ + AP+ Sbjct: 179 ISVIAVAAPL 188 >gi|94987179|ref|YP_595112.1| 50S ribosomal protein L25/general stress protein Ctc [Lawsonia intracellularis PHE/MN1-00] gi|166223692|sp|Q1MQD6|RL25_LAWIP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94731428|emb|CAJ54791.1| ribosomal protein L25 (general stress protein Ctc) [Lawsonia intracellularis PHE/MN1-00] Length = 197 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 8/193 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD + L R +GKG R L K IP I Y + PI L +K ++S+ Sbjct: 1 MDNLK-TLVVQKRLDLGKGPNRRLHKKNLIPGIFYTSSGKNIPIQLPELPFTK-IFSEVG 58 Query: 61 MTTILTLDIGKELVH----VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 TT+ L I + + VI + Q PV + +H D V + + VP+ F Sbjct: 59 RTTVFNLKIESDKENITHPVIIWELQYYPVKNRFMHVDLYGVELNKPIKIVVPLEFTG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G K GGKL +++L+ +IP IT+D++DL IG SI++ D++LPE + Sbjct: 117 TAKGTKVGGKLETYREQLTLIANPLDIPSKITLDISDLDIGKSIYVADLKLPEGVKTSYD 176 Query: 177 LNITIATIVAPIS 189 N I +++ P Sbjct: 177 TNYAIVSVIMPGG 189 >gi|297568582|ref|YP_003689926.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] gi|296924497|gb|ADH85307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] Length = 189 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 100/186 (53%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + A RD+ GKG+AR LR+ G+ PA++YG +P+ ++L +K L+S + ++ Sbjct: 3 QVDVKAAKRDQRGKGAARSLRRAGRTPAVLYGPQMEPQALSLDTHTFTKALFSVHRRNSV 62 Query: 65 LTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ G+++ HV+ ++ Q DP+ D ++HADF +S + VP+R+ K+ G Sbjct: 63 INLEVSDDGGEKIHHVVTREIQTDPILDQVLHADFYVISLDEPLVFQVPLRYRG--KAKG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L H+VSL A +IPD I VD++ L + ++ LP + + Sbjct: 121 VDMGGDLVTSLHKVSLKGKALDIPDDIEVDVSGLGPNSELTCGELSLPAGVELVQGKDEV 180 Query: 181 IATIVA 186 + Sbjct: 181 CVAVAG 186 >gi|34540029|ref|NP_904508.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis W83] gi|188994143|ref|YP_001928395.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis ATCC 33277] gi|71153158|sp|Q7MXK8|RL25_PORGI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736349|sp|B2RHF3|RL25_PORG3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34396340|gb|AAQ65407.1| ribosomal protein L25 [Porphyromonas gingivalis W83] gi|188593823|dbj|BAG32798.1| putative 50S ribosomal protein L25 [Porphyromonas gingivalis ATCC 33277] Length = 192 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L+ R + GK +A+ +RK QIPA++YG + +S + +YS Sbjct: 1 MKTFQLTGTPRAEFGKKAAKAIRKEDQIPAVLYGGKGEGVNFIVSQDAVRNLIYSPEIFL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LT++ G I K+ Q PV+D +IH DFLQV++ V + VPV + G+K Sbjct: 61 VELTVE-GSGSYKAILKEIQFHPVTDRIIHIDFLQVTDEKPVVMEVPVVLTGH--AEGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL++ ++ + + IP+ + +D++DL++G +I + ++ E + M+ N + Sbjct: 118 AGGKLSLEMRKLKVKALYSEIPEKLDIDVSDLQLGKTIQVGELHF-EGLTLMNAKNAVVC 176 Query: 183 TI 184 + Sbjct: 177 AV 178 >gi|255325403|ref|ZP_05366507.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] gi|255297489|gb|EET76802.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] Length = 217 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + + N Sbjct: 1 MAQRPV-IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDIQSLVRN-NG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K + ++ + H D L + G V V VPV E + G Sbjct: 59 VNAVLELEIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGEP-AAG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +V+ + NIP+ I V + L+ G I D+ +PE T+ +++ + Sbjct: 118 TMHIQDADVLL----VEADVLNIPEEIEVSIEGLEDGAVITAGDVTMPEDTTLVAEEDTV 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 IVSISLP 180 >gi|320532195|ref|ZP_08033062.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] gi|320135595|gb|EFW27676.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] Length = 203 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+P ++YG+ ++P+ + L L S + Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPVVVYGHGTEPRHLLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G E + V+ KD Q P+ + H DFL V V V VPV I +PG Sbjct: 61 ALVELVID-GGETLLVLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGT-AAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + PA ++P++I VD+ D+ G + + DI LP+ ++S + Sbjct: 119 TMH----MIEAATIMVSAPAVSVPETIEVDITDVAAGTVLTIADITLPKGVEAVSDADTA 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVA 179 >gi|297582391|ref|YP_003698171.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] gi|297140848|gb|ADH97605.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] Length = 213 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+++ + +R G IPA++YG KP+ + D K Y T + +L Sbjct: 5 LKAAPRNEMKGSTLTTIRSAGWIPAVVYGKEYGNKPVQVEEIDFIKT-YRAEGKTGVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ E V+ D Q D + + +H DF + + VPV + E + G+K GG L Sbjct: 64 DVEGEKTDVMIYDIQYDMMKNQYVHIDFYAANMKEEMDADVPVNVVGE--AQGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 E+S+ +PDSI V++ +L++ DSI ++D++ + + +IV P Sbjct: 122 QQGVFELSVRALPKELPDSIDVNVEELEVNDSIFVKDLKSGADFEFNNDPEEMVVSIVPP 181 Query: 188 I 188 Sbjct: 182 T 182 >gi|332291640|ref|YP_004430249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] gi|332169726|gb|AEE18981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] Length = 211 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG + P + + +Y+ + T Sbjct: 1 MKSVSIHGSKRESVGKKATKALRNAGLVPCVVYGGDT-PLHFSAPELAFKELVYTPDAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ V I +D Q PV+D ++H DF Q+ EG VT+++PV F S G+ Sbjct: 60 --VEIELDGVTVKAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFTG--NSRGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITI 181 GG L + + N+PD + D+ +LKIG+ +++ LP E + M N + Sbjct: 116 NGGVLRKTNRVLRVKALPKNLPDYLVADITNLKIGNKLYIG--ALPQENLTLMHPDNTVV 173 Query: 182 ATI 184 + Sbjct: 174 CQV 176 >gi|315645850|ref|ZP_07898971.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315278611|gb|EFU41925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 208 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 7/185 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R++ + S R+LR+NG IP ++YG + P+A+ KD SK ++ + + Sbjct: 7 VQLKADVRNEFTRASRRVLRENGGIPGVVYGAGEESIPVAVDFKDTSKLFHT--GRSEVF 64 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI G + V+ KD Q + H DFL++S V V + V F + + G K G Sbjct: 65 QLDIPGSGKIPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIGVDF--QGTAVGTKSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + + ++P ++ VD++ L+IGD + + DI++P+ + + +A++ Sbjct: 121 GILQTQLNAIDVEGLPGDLPSTLEVDVSALEIGDKLTVADIKVPKGITLHASEEEVLASV 180 Query: 185 VAPIS 189 + P + Sbjct: 181 IVPRA 185 >gi|298345582|ref|YP_003718269.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] gi|298235643|gb|ADI66775.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] Length = 208 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K+ V+ KD Q PV ++H D L V V V VP+ I E S G Sbjct: 64 LKGLKDPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMS-----GLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 PISG 190 P Sbjct: 179 PQEA 182 >gi|297207396|ref|ZP_06923835.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887959|gb|EFH26853.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 219 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 97/180 (53%), Gaps = 4/180 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LRK+G++PA++YG + + + + K + + ++ Sbjct: 6 LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIR-EVGRNGVIE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 65 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVGAKEGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP++I VD+ +L I DS+ + D+++ + + ++ T+VA Sbjct: 123 VEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSSESVVTVVA 182 >gi|315656038|ref|ZP_07908936.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] gi|315490102|gb|EFU79729.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] Length = 208 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K V+ KD Q PV ++H D L V V V VP+ I E S G Sbjct: 64 LKGLKNPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMS-----GLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 PISG 190 P Sbjct: 179 PQEA 182 >gi|304391137|ref|ZP_07373089.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326020|gb|EFL93266.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 208 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K V+ KD Q PV ++H D L V V V VP+ I E S G Sbjct: 64 LKGLKNPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMS-----GLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 PISG 190 P Sbjct: 179 PQEA 182 >gi|329948076|ref|ZP_08294977.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] gi|328523215|gb|EGF50316.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] Length = 203 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R GKGSAR R+ GQ+P ++YG+ ++P+ L L S + Sbjct: 1 MANNAITLKAQVRTDFGKGSARQARRAGQVPVVVYGHGAEPRHFLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G E + V+ KD Q P+ + H DFL V V V VPV I +PG Sbjct: 61 ALVELVID-GGETLLVLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGT-AAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + PA ++P++I VD+ + G + + DI L E ++S Sbjct: 119 TMH----MIEAATIMVSAPAVSVPEAIEVDITGVAAGTVLTIADITLSEGIEAVSDAETA 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVA 179 >gi|225011226|ref|ZP_03701685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] gi|225004640|gb|EEG42603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] Length = 210 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG P + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKKATKALRNAGMVPCVIYGGDK-PVHFSAAELAFKPLIYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L + + +D Q PV+D ++H DF Q+ VT+ +PV+ E SPG++ Sbjct: 60 VTVDLA-DGTKIDAVLQDIQFHPVTDKILHIDFYQLFSDKPVTMSIPVQL--EGNSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG++ ++ + ++PD +VD++ LKIG +I + + L EK + + + I Sbjct: 117 NGGRMLFRKRKLMIKALPGDLPDFFSVDISKLKIGGTIAVSSL-LDEKYTFLQPESTAIV 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|300781623|ref|ZP_07091477.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] gi|300533330|gb|EFK54391.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] Length = 228 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 6/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R++ GKG++R LR G++P ++Y + D + +IS + + + IL L Sbjct: 6 IKAEKREEFGKGASRRLRAAGRVPGVLYSSGEDNLHFHVDILEISALVRN-DGTNAILEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI E + K+ + ++ + H D L V G V V VPV + E + + Sbjct: 65 DIDGEKNLAMVKNIDQNVLTLNIDHIDLLGVKRGEKVNVEVPVTYEGEAAADAVVL---- 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + A IPD I V + +IGD I D++LPE ++ + + Sbjct: 121 -QELDVVEIEVEALKIPDEIIVSIEGKEIGDQIFASDLQLPEGAELLTDPEFLVINVT 177 >gi|296118204|ref|ZP_06836785.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] gi|295968762|gb|EFG82006.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] Length = 215 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R + GKG+AR LR+ GQ+P +IYG+ ++P A ++ + + Sbjct: 1 MAQRPI-IKAQARTEFGKGAARRLRRAGQVPGVIYGSNTEPIHFAADILELHSLIRNYGA 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L L+I + + K + ++ + H D L + G V V VP+ + E +PG Sbjct: 60 -NAVLELEIDGDQHLTMVKAIDQNVLTLDMDHLDLLSIKRGEKVEVEVPLTLVGEP-APG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +V+ + NIP+ I V + L+ G + ++ LPE T+ ++ Sbjct: 118 LMFISDTDVLL----VESDVLNIPEEIEVSIEGLEDGTVVTAGEVNLPEGTTLIADPESP 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 IVSISEP 180 >gi|260893657|ref|YP_003239754.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] gi|260865798|gb|ACX52904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] Length = 197 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 6/174 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG L G+IPA++YG P+ +S +D+ K L + ++ L Sbjct: 5 LVAQVRTGRGKGYRNRLAAQGKIPAVVYGKALGSVPVEVSLRDLKKVLGGETIKGKLIDL 64 Query: 68 DIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 I + + K+ Q +P++ LIH DF QVS VT VPV E G+K+ Sbjct: 65 KIVGDGWERQEKALVKEMQHNPLTGELIHVDFHQVSLTEEVTATVPVELSGE--PVGVKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GG L EV + C +P+ I VD++ L +GD+I + D+ +P ++ Sbjct: 123 GGVLEHFLREVEISCLPTALPEVIKVDVSSLDVGDTIFVRDLPVPPGVKVLADP 176 >gi|262201499|ref|YP_003272707.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] gi|262084846|gb|ACY20814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] Length = 210 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 7/191 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL+ R + GKG+AR R+ G++PA++YG+ +DP+ ++L A++++ L + N Sbjct: 1 MATETTKLAVTTRTEKGKGAARRARREGKVPAVLYGHRTDPQHLSLPARELAAILRA-NG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ LDI + K + P+ + + H D L + G VTV V + + +PG Sbjct: 60 TNAIIDLDIEGTSQLALTKQIDVHPIRNYIEHVDLLVIRRGEKVTVEVTIVVEG-DAAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V + A +IP+ ITV + G S+H D+ LP+ S +S Sbjct: 119 T----LVVQDASVVEIEADALSIPEQITVSVEGTAAGVSVHAADLDLPQGVSLVSDPETL 174 Query: 181 IATI-VAPISG 190 I I AP + Sbjct: 175 IVAINEAPTAA 185 >gi|283458589|ref|YP_003363222.1| 50S ribosomal protein L25 [Rothia mucilaginosa DY-18] gi|283134637|dbj|BAI65402.1| ribosomal protein L25 [Rothia mucilaginosa DY-18] Length = 219 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K+SA +R GKG AR +R G IPA+IYG+ +PK + L + N I Sbjct: 4 TIKISATVRSDFGKGYARRIRMAGDIPAVIYGHGEEPKHVVLPGHATTLAARVPN---AI 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LDI E + KD Q + L H D L V G V + VPV E G Sbjct: 61 LDLDIEGESHLAMIKDIQRHAIRPELQHIDLLTVKRGERVEIEVPVHVEGEPA-----VG 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 N + + A P+++TV + + G + D+ LP + ++ + I + Sbjct: 116 AVANQEETVLLVEADALKAPEALTVSIEGREAGAHVLASDVELPSGVTLVADAELLIVNV 175 Query: 185 VAP 187 P Sbjct: 176 SEP 178 >gi|294787655|ref|ZP_06752899.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] gi|294483948|gb|EFG31631.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] Length = 188 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR + ++PA++YG + K I + K++ L ++F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHDSKVPAVVYGLG-ETKAITVDHKEMFYALQKESFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 +I + VI +DYQ+ PV + H DF + V + +P+ N S +K Q G+ Sbjct: 63 NIDGKEQDVIVRDYQMHPVKRQVQHIDFQAIDINQPVRIKLPIHIKNAEISHAVKMQAGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ D PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCAKVVAGDILHLSDFVYPEGVQSIALKRNSNLAVAT 182 Query: 184 IVA 186 + Sbjct: 183 VTG 185 >gi|149369577|ref|ZP_01889429.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] gi|149357004|gb|EDM45559.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] Length = 204 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG P + SK +Y+ + T Sbjct: 1 MKSITINGSQRESVGKKATKALRDAGKVPCVVYG-GEAPIHFSADELAFSKLVYTPDVHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD + V I +D Q PV+D ++H DF Q+S+ V + +PVR S G++ Sbjct: 60 VVIELD--GKKVDAILQDIQFHPVTDRILHIDFYQISDDKEVMLEIPVRITG--NSRGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + N+PD I VD+ ++KIGD +++ +K + + N I Sbjct: 116 NGGTLRIVSRKLRVKAIPANLPDVIEVDITEMKIGDKLYVTA-AANDKFTILHSDNEVIC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|226365173|ref|YP_002782956.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus opacus B4] gi|254801058|sp|C1AY16|RL25_RHOOB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226243663|dbj|BAH54011.1| 50S ribosomal protein L25 [Rhodococcus opacus B4] Length = 208 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + +++ + L + + + Sbjct: 4 ENRLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSREFAAILRA-HGTNAV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTLDI + + K + P+ + + HAD L + +G VTV VPV E S G Sbjct: 63 LTLDIDGKEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAAS-----G 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + VSL A +IP+ I V + L++G I + LP+ + + + I + Sbjct: 118 TLVAQDAATVSLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGATLQADEELLIVNV 177 Query: 185 VAPISGS 191 VA + + Sbjct: 178 VAAPTAA 184 >gi|299135706|ref|ZP_07028890.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] gi|298601830|gb|EFI57984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] Length = 225 Score = 177 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 6/189 (3%) Query: 1 MDQKECK-LSAVMRDK-VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M + + + A R KG AR +R +G IPA++YG + + + + I+K LYS+ Sbjct: 1 MSTSKIEAVVATPRTGTFNKGHARRVRVSGLIPAVVYGAGQESVAVTVDPRVITKILYSE 60 Query: 59 NFMTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + TI L I + V+ D+Q +P+ L+H D +++ + V VPV+ I Sbjct: 61 SGHNTIFDLAIEGKGTNKVMIVDWQHEPIKGKLLHIDLKRIAMDKAMRVSVPVQLIG--V 118 Query: 118 SPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G+K GG L V HEV + C +IPD I +D+ +L+I +IH+ D+ +K + + Sbjct: 119 PVGVKTGGGVLGQVLHEVEVECLPGDIPDHIDIDVANLEINGAIHISDLPHSDKLKFLGE 178 Query: 177 LNITIATIV 185 + +A + Sbjct: 179 EDALVAHVT 187 >gi|311740785|ref|ZP_07714612.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304305|gb|EFQ80381.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] Length = 215 Score = 177 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + + N Sbjct: 1 MAQRPV-IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDIQSLVRN-NG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K + ++ + H D L + G V V VPV E + G Sbjct: 59 VNAVLELEIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGEP-AAG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +V+ + NIP+ I V + L+ G I D+ +PE T+ +++ + Sbjct: 118 TMHIQDADVLL----VEADVLNIPEEIEVSIEGLEDGAVITAADVTMPEDTTLVAEEDTV 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 IVSISLP 180 >gi|319949668|ref|ZP_08023702.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] gi|319436659|gb|EFV91745.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] Length = 209 Score = 177 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R++ ++PA++YG+ ++P+ + L A + + L +LT Sbjct: 6 KLAATVRTEFGKGASRRARRDFKVPAVLYGHNTEPRHLLLGALEFAAILRH-AGTNALLT 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E +PK + P++ ++ H D + V +G V V + V E +PG Sbjct: 65 LDIEGEEQLALPKQIDVHPLTRVIEHTDLIVVRKGEKVVVEIAVLVTGE-AAPGT----L 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + A NIP+ V + D + G I D+ LP + +S + ++ Sbjct: 120 VTTDADVIEVEVDALNIPEDFEVSVEDAQAGTQITAADVTLPAGATLISDPETLLVNVME 179 Query: 187 PISGS 191 SG+ Sbjct: 180 APSGA 184 >gi|256833157|ref|YP_003161884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] gi|256686688|gb|ACV09581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] Length = 193 Score = 177 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 100/182 (54%), Gaps = 7/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL A R GKG+AR LR++G +PA+IY + S + I L ++ + KN + Sbjct: 1 MSDVKLVASARTSFGKGAARQLRRDGHVPAVIYSHGSAAEHIYLDGHEVFLTV--KNHRS 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++L +D+ E+ VI KD Q DP+ ++ H DFL V +G TV VPV + E + Sbjct: 59 SLLNIDLDGEVKTVIIKDVQRDPIGRVVEHIDFLAVKKGEKSTVEVPVVLVGEAAA---- 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + + + ++ + +P+++ V ++ L+ G ++++D+ LP+ +++ + +A Sbjct: 115 -GAQATLELMKATVEADVSVLPENVEVSVDGLEAGTVLYVKDVTLPDGQVFINEDDQVVA 173 Query: 183 TI 184 + Sbjct: 174 VV 175 >gi|184201366|ref|YP_001855573.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] gi|226736333|sp|B2GLJ3|RL25_KOCRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|183581596|dbj|BAG30067.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] Length = 211 Score = 177 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R + GKG AR +R N +IPA+IYG+ ++P + L ++ + N +L Sbjct: 5 ITIPATLRTEFGKGYARRVRANDKIPAVIYGHGAEPLHVILPGHEMMLASRNSN---AVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ E + K+ Q V ++H D L V G V V +PV E I Sbjct: 62 DINVDGEGHLAMIKEVQRHAVRPEILHIDLLTVRRGERVEVEIPVHVEGEVAPTAIH--- 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 NV + + + A +P+ +TVD+ DL++G+ ++ +D+ LP + +S + + + Sbjct: 119 --NVEENVLVVEADALKVPEYLTVDITDLEVGEHVYAKDVTLPGNVTLVSDPELLVVNVS 176 Query: 186 API 188 P+ Sbjct: 177 EPV 179 >gi|315656085|ref|ZP_07908976.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493087|gb|EFU82687.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 208 Score = 177 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + V+ KD Q PV ++H D L V V V VP+ I E S G Sbjct: 64 LKGLENPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEPMS-----GLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 PISG 190 P Sbjct: 179 PQEA 182 >gi|327399267|ref|YP_004340136.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] gi|327181896|gb|AEA34077.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] Length = 195 Score = 177 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 4/179 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A RD +G +A+ LR+ G+IPA+IYG + IA+ + + L Sbjct: 3 ITAQKRD-IGTKAAKKLRREGKIPAVIYGADFGSEHIAVDRSEFMAAIRRSR-RNDRFEL 60 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E VI K+ Q PV + + H DF +++EG VTV VPVR + E S G+K GG L Sbjct: 61 KLDNEEFKVIVKEIQWHPVKEEVEHVDFYKLTEGRPVTVDVPVRVVGE--SKGVKMGGDL 118 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +++ IP+ I +D+ +L+IGD +H+ D+ +PE S N T+ I+ Sbjct: 119 YQPRKRITVEALPEAIPNEIEIDVTNLQIGDVVHVFDLDMPEGVRVKSSKNFTLVAILG 177 >gi|320104416|ref|YP_004180007.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] gi|319751698|gb|ADV63458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] Length = 202 Score = 177 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 5 ECKLSAVMRD-----KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 KL A R G AR LR+ G IPAIIYG+ PI L D+ + + + Sbjct: 4 TVKLEAQARSPEKNKGTGTRVARKLRQQGLIPAIIYGHKEPNLPIVLKHDDVWRIIKQQ- 62 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + + L + + V+ + Q D +S +IH DF +VS TV V + F Sbjct: 63 --SHRVDLVVAGKTEEVLVRHVQWDHLSRDIIHLDFYRVSPEETVESIVRLEFKG--TPA 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L HE+ + C A++IPD I VDL+ L++G S++ D+ LP ++ Sbjct: 119 GVAAGGLLETPVHELKVDCRADSIPDLIAVDLSGLELGQSLYARDVPLPAGVKLHGNPDL 178 Query: 180 TIATIVA 186 +A +VA Sbjct: 179 LVAHVVA 185 >gi|297591588|ref|ZP_06950225.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300910355|ref|ZP_07127808.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|297575457|gb|EFH94174.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300888344|gb|EFK83531.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|312436409|gb|ADQ75480.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH60] gi|320139412|gb|EFW31290.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA131] gi|320144189|gb|EFW35957.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA177] Length = 219 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 4/180 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LRK+G++PA++YG + + + + K + + ++ Sbjct: 6 LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIR-EVGRNGVIE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 65 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVGAKEGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+VA Sbjct: 123 VEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVVA 182 >gi|325858418|ref|ZP_08172580.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|327313924|ref|YP_004329361.1| 50S ribosomal protein L25, Ctc-form [Prevotella denticola F0289] gi|325483056|gb|EGC86044.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|326944809|gb|AEA20694.1| ribosomal protein L25, Ctc-form [Prevotella denticola F0289] Length = 204 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAK--DISKRLYS 57 KE K++ R +GK +++L+RK G +P +YG P ++ +A ++ K +Y+ Sbjct: 1 MKEIKVTGQKRTDLGKKASKLVRKEGLVPCNLYGEARKDGKPVALSFTASMAELRKLVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E + K+ Q PV+D L+H DF +V++ +T+ VPV+ + Sbjct: 61 PHIY--VVELVIDGESHTAVLKELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +++ DL++G SI + ++ E ++ Sbjct: 117 AQGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTDLRLGKSIKVGELSF-EGLELVTPK 175 Query: 178 NITIATIVA 186 + + +I A Sbjct: 176 EVVVCSIKA 184 >gi|261337364|ref|ZP_05965248.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] gi|270277743|gb|EFA23597.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] Length = 197 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R IPA +Y P + L K+ + L N Sbjct: 1 MATTTITLEGNLRTEFGKGPARRMRVAKLIPATVYAGGDQPVYLTLPMKETTLALRHNN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++TL + + KD Q +PV I+ H DF +V G + V VPV E K Sbjct: 60 --ALITLKYDGKSTMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIEVEVPVFVEGEPKGAA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 ++V + + N+P+ IT+D+ L G+ I + LPE ++ + Sbjct: 118 T---AFVDVQM--LKVRADVANLPERITIDVTGLSAGEHITAAGLELPEGIELDVTDPDE 172 Query: 180 TIATI 184 +I ++ Sbjct: 173 SIVSV 177 >gi|313885342|ref|ZP_07819093.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] gi|312619448|gb|EFR30886.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] Length = 205 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 5/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KLSA +R + G +++ R+ G IP +YG + + + ++A++ L + + Sbjct: 1 MKLSAELRTETGTAASKRARRQGLIPVTMYGKDFETQSLLINAREFEAILRKE-GSNAVF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+ + V KD+Q + D +S + V +P+ + E + G Sbjct: 60 ELETDGKTQTVWVKDFQKAALKSEFYSVDLEAISANQKLEVEIPLVLVGEES----VKVG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + + PA+NIP S +D+ ++IGD+ + D+ +P + + + + TI ++ Sbjct: 116 IVETVINSILAEAPASNIPQSFELDVTGMEIGDTKAVSDLEVPSDVTVLLEADQTIVSVS 175 Query: 186 AP 187 AP Sbjct: 176 AP 177 >gi|198277115|ref|ZP_03209646.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] gi|198269613|gb|EDY93883.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] Length = 198 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K ++ +R + GK + R LRK+ +P ++YG D + + + +Y Sbjct: 1 MKSIEIKGSLRTETGKKATRELRKDNGVPCVLYGTQKDENGNQVATHFTVPTEGLRNLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E Sbjct: 61 TPHIY--VVDLNIDGKIVNAIMKDIQFHPVTDKILHVDFYQIDESKPIVMEVPVKL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GGKL + ++ + N IP+ + VD+ L +G +I + +++ E ++ Sbjct: 117 LAEGVKAGGKLALQIRKLKVKALYNVIPERLVVDVTPLGLGKTIKVGELKY-EGLELLNA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|312138688|ref|YP_004006024.1| 50S ribosomal protein l25 rply [Rhodococcus equi 103S] gi|325676243|ref|ZP_08155922.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] gi|311888027|emb|CBH47339.1| 50S ribosomal protein L25 RplY [Rhodococcus equi 103S] gi|325552804|gb|EGD22487.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] Length = 197 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 6/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A +R + GKG+AR R++GQ+PA++YG+ +DP+ + L A++ + L + + ++ Sbjct: 6 KLVASVRSEFGKGAARRARRDGQVPAVLYGHGTDPQHLNLPAREFAAILRA-HGTNVVIN 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V +G V V VP+ G Sbjct: 65 LDIDGKDQLALTKSVVVHPIRRHIEHADLLIVQKGEKVAVEVPIVVTGTAAP-----GAL 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + L A +IP+S+ + + ++G + LP+ + + + +V Sbjct: 120 VTEETTTIKLEVDALDIPESVEISVEGAEVGTQFLAGAVALPKGATLADDAELLLVNVV 178 >gi|319789278|ref|YP_004150911.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] gi|317113780|gb|ADU96270.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] Length = 199 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K ++ A R+K GK A+ LR+ G +PA+IYG + PIA+ AK++ + + Sbjct: 1 MKVVEVKATRREKTGKEVAKKLRREGLLPAVIYGGGRPEATPIAIPAKEVRRIKHHHG-- 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ +D+G E I KD Q + + D+ IH DF +V+ G T+ V V + F+ G+ Sbjct: 59 --LIKVDLGDEERMCILKDIQYNWLGDVPIHVDFQEVTFGETLEVVVELEFVG--TPVGV 114 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++GG L ++ EV++ IP+ I VD+++L GD++H++D+ LPE + + T Sbjct: 115 SEEGGVLEILKREVAIETLPREIPEKIVVDISNLHAGDALHVKDLPLPEGAKFVDSPDET 174 Query: 181 IATIV 185 + + Sbjct: 175 VVVVT 179 >gi|305665462|ref|YP_003861749.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] gi|88710218|gb|EAR02450.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] Length = 219 Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G++P ++YG P + + +Y+ N T Sbjct: 1 MKSITIKGSERESVGKKATKALRNAGKVPCVVYG-GEKPLHFSANELAFKNLVYTANAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ + V+ + +D Q PV+D +IH DF Q+ + VT+++PVR E SPG++ Sbjct: 60 VVVELE-NGDKVNAVMQDIQFHPVTDKIIHIDFYQLFKDKEVTMNIPVRL--EGNSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ N+ D VD++ LKIGD+I +E + L S + + + Sbjct: 117 NGGRLLFRKRKLTIKAFPENLIDFFKVDISTLKIGDNISVESL-LSNDFSILHPDSTVVV 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|88801937|ref|ZP_01117465.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] gi|88782595|gb|EAR13772.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] Length = 199 Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG + K +Y+ N T Sbjct: 1 MKSITIKGSKRESVGKVATKALRNAGMVPCVIYGGGK-LVHFSAEELAFKKLVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ + + + I KD Q PV+D +IHADF Q+ E +T+ +PV SPG+ Sbjct: 60 A--TIIVDGQSIQTILKDIQFHPVTDRIIHADFYQLFEDKEITMRIPVNLTG--TSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD + +++ L+IG + + + + + M N + Sbjct: 116 NGGSLRFTNRKLKVKALPANLPDFVNANISALRIGGKLTVASLTT-DGYTFMHPDNTVVV 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|206890546|ref|YP_002249253.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] gi|226736374|sp|B5YG55|RL25_THEYD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206742484|gb|ACI21541.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] Length = 214 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 4/180 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R++ GKG AR LR G IP +IY P+ + K++ + Sbjct: 1 MEKFILNVEKRERTGKGIARQLRSKGIIPCVIY-KNGQSTPVQIPTKELYTFMNIATREK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL + + I +DYQ+DPV+ L+H DF++VS + V +PV I E G+K Sbjct: 60 LFVTLKLDGQEKQAILQDYQVDPVTGKLLHVDFMEVSATEKIRVTIPVVLIGE--PIGVK 117 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 Q G L E+ + IP I VD++ L++GD++H+ DI+ E +S I Sbjct: 118 QDKGVLQHGISEIEIEAIPEKIPGHIEVDVSHLEVGDAVHVSDIKFEEGIKVISNPEEVI 177 >gi|118473057|ref|YP_889670.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium smegmatis str. MC2 155] gi|118174344|gb|ABK75240.1| ribosomal protein L25, Ctc-form [Mycobacterium smegmatis str. MC2 155] Length = 215 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R++G++PA++YG+ +DP+ + L+A+D + L S + ILT Sbjct: 10 KLTANVRTRTGKGASRQARRDGKVPAVLYGHGTDPQHLELNARDFAAVLRS-HGTNAILT 68 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K + P+ + HAD L V G VTV V V + G Sbjct: 69 LDIEGTEQLALTKALDVHPIRRNIQHADLLVVQRGEKVTVEVTVLVEGDATP-----GTL 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + + A +IP+ +TV + ++ G I I LPE + +S + + +V Sbjct: 124 VTQDANTIEIEAEALSIPEQLTVSVEGVEAGTQITAGQISLPEGVNLISDPELLVVNVVE 183 Query: 187 PIS 189 S Sbjct: 184 APS 186 >gi|41407077|ref|NP_959913.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464181|ref|YP_880402.1| 50S ribosomal protein L25 [Mycobacterium avium 104] gi|254774032|ref|ZP_05215548.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. avium ATCC 25291] gi|71153152|sp|Q741V8|RL25_MYCPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41395428|gb|AAS03296.1| RplY [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165468|gb|ABK66365.1| ribosomal protein L25, Ctc-form [Mycobacterium avium 104] Length = 219 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLTAAVRTETGKGASRRARRAGKIPAVLYGHGTDPQHLELPGHDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V G V V V V + G Sbjct: 67 LDIDGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVVVEVTVVIEGDAAP-----GSL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + A +IP+ TV + D + G I LP+ + +S + + +V Sbjct: 122 VTQEASTIEIEAEALSIPEQFTVSVEDAEPGTQFTAGQIALPKGVNLISDPELLVVNVVN 181 Query: 186 API 188 AP Sbjct: 182 APT 184 >gi|15923491|ref|NP_371025.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50] gi|15926178|ref|NP_373711.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus N315] gi|21282185|ref|NP_645273.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MW2] gi|49485365|ref|YP_042586.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MSSA476] gi|57650042|ref|YP_185433.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus COL] gi|82750208|ref|YP_415949.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus RF122] gi|87162260|ref|YP_493188.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194261|ref|YP_499053.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266960|ref|YP_001245903.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH9] gi|150393006|ref|YP_001315681.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH1] gi|151220676|ref|YP_001331498.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. Newman] gi|156978829|ref|YP_001441088.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu3] gi|161508741|ref|YP_001574400.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142307|ref|ZP_03566800.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315230|ref|ZP_04838443.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730969|ref|ZP_04865134.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253735236|ref|ZP_04869401.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|255005294|ref|ZP_05143895.2| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424613|ref|ZP_05601041.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257427279|ref|ZP_05603680.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257429916|ref|ZP_05606302.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257432618|ref|ZP_05608980.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257435522|ref|ZP_05611572.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257794258|ref|ZP_05643237.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|258407225|ref|ZP_05680370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|258420808|ref|ZP_05683744.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|258424463|ref|ZP_05687342.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|258429618|ref|ZP_05688292.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|258446112|ref|ZP_05694273.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|258448020|ref|ZP_05696150.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|258452818|ref|ZP_05700813.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|258453834|ref|ZP_05701807.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|262049986|ref|ZP_06022845.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262052530|ref|ZP_06024727.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|269202121|ref|YP_003281390.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|282895109|ref|ZP_06303329.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|282903087|ref|ZP_06310979.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282904876|ref|ZP_06312736.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282907823|ref|ZP_06315661.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910139|ref|ZP_06317945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282913329|ref|ZP_06321120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282915819|ref|ZP_06323587.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282918282|ref|ZP_06326022.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282923033|ref|ZP_06330719.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282925576|ref|ZP_06333229.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|283768936|ref|ZP_06341845.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283957291|ref|ZP_06374749.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|284023510|ref|ZP_06377908.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus 132] gi|293500378|ref|ZP_06666230.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|293509316|ref|ZP_06668032.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|293515905|ref|ZP_06670595.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|294850361|ref|ZP_06791094.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|295407391|ref|ZP_06817188.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295427035|ref|ZP_06819672.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276154|ref|ZP_06858661.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MR1] gi|297246471|ref|ZP_06930311.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|304380518|ref|ZP_07363195.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|68053029|sp|Q5HIH4|RL25_STAAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153660|sp|Q99WA2|RL25_STAAM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153661|sp|Q7A7B3|RL25_STAAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153663|sp|Q6GBY7|RL25_STAAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153664|sp|Q7A1S4|RL25_STAAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893398|sp|Q2FJE0|RL25_STAA3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893399|sp|Q2YVY4|RL25_STAAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13700391|dbj|BAB41689.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus N315] gi|14246269|dbj|BAB56663.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu50] gi|21203621|dbj|BAB94321.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MW2] gi|49243808|emb|CAG42233.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284228|gb|AAW36322.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus COL] gi|82655739|emb|CAI80138.1| 50S ribosomal protein L25 general stress protein [Staphylococcus aureus RF122] gi|87128234|gb|ABD22748.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201819|gb|ABD29629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740029|gb|ABQ48327.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus JH9] gi|149945458|gb|ABR51394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus JH1] gi|150373476|dbj|BAF66736.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus str. Newman] gi|156720964|dbj|BAF77381.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu3] gi|160367550|gb|ABX28521.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725281|gb|EES94010.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726796|gb|EES95525.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|257272640|gb|EEV04760.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257275930|gb|EEV07398.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257279432|gb|EEV10027.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257282483|gb|EEV12616.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257285159|gb|EEV15276.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257788230|gb|EEV26570.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|257841183|gb|EEV65632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|257843200|gb|EEV67613.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|257845332|gb|EEV69367.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|257849677|gb|EEV73644.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|257855089|gb|EEV78031.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|257858710|gb|EEV81583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|257859504|gb|EEV82357.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|257864005|gb|EEV86760.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|259159577|gb|EEW44624.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|259161921|gb|EEW46504.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262074411|gb|ACY10384.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|269940072|emb|CBI48448.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TW20] gi|282314552|gb|EFB44939.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282317848|gb|EFB48217.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282320310|gb|EFB50652.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282322800|gb|EFB53120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282325987|gb|EFB56293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282328299|gb|EFB58574.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331993|gb|EFB61502.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282592480|gb|EFB97492.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|282596513|gb|EFC01473.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282762527|gb|EFC02667.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|283461117|gb|EFC08203.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283469793|emb|CAQ49004.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ST398] gi|283791215|gb|EFC30025.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|285816200|gb|ADC36687.1| LSU ribosomal protein L25p [Staphylococcus aureus 04-02981] gi|290921313|gb|EFD98371.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|291096338|gb|EFE26598.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|291467861|gb|EFF10371.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|294822785|gb|EFG39221.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|294967748|gb|EFG43780.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295129038|gb|EFG58667.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297176658|gb|EFH35920.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|298693831|gb|ADI97053.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus ED133] gi|302332214|gb|ADL22407.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus JKD6159] gi|302750392|gb|ADL64569.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340963|gb|EFM06886.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312828996|emb|CBX33838.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128629|gb|EFT84632.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS03] gi|315196184|gb|EFU26540.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS01] gi|323438733|gb|EGA96473.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O11] gi|323442055|gb|EGA99690.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O46] gi|329313220|gb|AEB87633.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus T0131] gi|329725045|gb|EGG61540.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21172] gi|329729782|gb|EGG66179.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21189] gi|329731082|gb|EGG67454.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21193] Length = 217 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 4/180 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LRK+G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIR-EVGRNGVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+VA Sbjct: 121 VEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVVA 180 >gi|111022660|ref|YP_705632.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus jostii RHA1] gi|122955279|sp|Q0S4R2|RL25_RHOSR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110822190|gb|ABG97474.1| 50S ribosomal protein L25 [Rhodococcus jostii RHA1] Length = 207 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 6/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + ++D + L + + I Sbjct: 4 ENRLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSRDFAAILRA-HGTNAI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTLDI + + K + P+ + + HAD L + +G VTV VPV E + G Sbjct: 63 LTLDIEGKEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAAA-----G 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + +SL A +IP+ I V + L++G I + LP+ ++ + + I + Sbjct: 118 TLVAQDAATISLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGSTLQADEELLIVNV 177 Query: 185 VAPISGS 191 VA + + Sbjct: 178 VAAPTAA 184 >gi|298207389|ref|YP_003715568.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] gi|83850025|gb|EAP87893.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] Length = 217 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ +GK + + LR +P ++YG P + K+ +Y+ + T Sbjct: 1 MKSITIYGSKRESLGKKATKALRNAEAVPCVLYG-GEKPVHFSAEEKEFRNLIYTPDVHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD E + I +D Q PVS+ ++H DF ++ +G +T+ +P+ +E + G+K Sbjct: 60 VVIELD-NGEKYNAIVQDLQFHPVSEAILHVDFYEIVDGRPITMEIPIH--SEGVAKGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + A N+PD I D+ LKIG+ +++ ++ + + N I Sbjct: 117 NGGVLRFNLRRLKVKGLAKNLPDYIVADVTKLKIGNKLYVTEVAN-DDYKILHPDNTVIC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|149203915|ref|ZP_01880883.1| ribosomal protein L25 [Roseovarius sp. TM1035] gi|149142357|gb|EDM30402.1| ribosomal protein L25 [Roseovarius sp. TM1035] Length = 208 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 3/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P +++G +P I + + KRL F Sbjct: 1 MAGEIPDLQAQERAGTGKGAARAARRAGMVPGVVFGGDKEPLAINIPFNALLKRLKKGRF 60 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + + V VI +D Q D V D+ H D +++ + + + + V FIN + Sbjct: 61 KSTLFNLQVEGHDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINAEQCK 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMS-QL 177 +++GG L VV EV L A +IPD +TVDL+ ++ IGD + + + LP + + Sbjct: 121 ALRKGGVLTVVRPEVELNVLAGDIPDHVTVDLSKVEKIGDVVTISMVDLPAGSEPVIKDR 180 Query: 178 NITIATIVAPIS 189 + I I AP + Sbjct: 181 DFVICNISAPSA 192 >gi|108801217|ref|YP_641414.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. MCS] gi|119870368|ref|YP_940320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. KMS] gi|126437197|ref|YP_001072888.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. JLS] gi|108771636|gb|ABG10358.1| LSU ribosomal protein L25P [Mycobacterium sp. MCS] gi|119696457|gb|ABL93530.1| LSU ribosomal protein L25P [Mycobacterium sp. KMS] gi|126236997|gb|ABO00398.1| LSU ribosomal protein L25P [Mycobacterium sp. JLS] Length = 222 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R+ G++PA++YG+ +DP+ + ++A+D + L +LT Sbjct: 8 KLTAAVRTETGKGASRRARREGKVPAVLYGHGTDPQHLEVNARDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V G VTV V V + G Sbjct: 67 LDIDGTEQLALTKSLEIHPIRRNIQHADLLVVRRGEKVTVEVNVVVEGDATP-----GAL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + + +IP+ +TV + + G I + LP + +S + IV+ Sbjct: 122 VTQEANAIEIEADVQSIPEQLTVSVEGAEEGTQITAAQVELPSGVTLISDPETLVVNIVS 181 Query: 187 PISGS 191 S Sbjct: 182 APSAE 186 >gi|209523976|ref|ZP_03272528.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] gi|209495648|gb|EDZ95951.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] Length = 201 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 8/190 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R K R LR+ G IPA++YG+ ++ + + + AK + T Sbjct: 2 EITVQCQKRPSGSK--PRALRREGLIPAVLYGHKGAESEELTIDAKSAENLMKKGAVNHT 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q P H F V +V V +P+ FI E G+ Sbjct: 60 LIQLNIPDLSWAGKALLREVQTHPWKGFPYHLSFFSVGTLESVEVTIPLNFIGE--PIGV 117 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GG L++V EV + C NIP++I V+++ L++GD++H+ +++LPE +++ + Sbjct: 118 KNSGGMLDLVITEVQVNCKPGNIPEAIDVEVSSLEVGDALHISELQLPEGVEVIAEADQV 177 Query: 181 IATIVAPISG 190 +A+I+ G Sbjct: 178 VASILYRGGG 187 >gi|295396693|ref|ZP_06806839.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] gi|294970439|gb|EFG46368.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] Length = 218 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 6/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + KL A +R+ GKG AR R G++P ++YG ++P ++ I + + N + I Sbjct: 3 DIKLEAELRENYGKGYARRTRAAGRVPGVLYGRGNEPAHLSFDGHAIMMAMKNPNSLVEI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T D GK + +D Q PV +IH DF+ V G + V +PV + E +PG Sbjct: 63 STAD-GKVKSLAVARDIQRHPVRRDIIHVDFIIVKRGEKIEVEIPVSPVGE-AAPGT--- 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++V + +L IP+ + + D K+G+ + +D+ LPE + + + + Sbjct: 118 -LVSVETQTLRVLADPTQIPELFELSIEDRKVGEHVFAKDVELPEGVELIDDEEMMLIHV 176 Query: 185 VA 186 A Sbjct: 177 AA 178 >gi|326802495|ref|YP_004320314.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] gi|326553259|gb|ADZ81644.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] Length = 195 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 96/183 (52%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG + A+SA D+ +Y+ Sbjct: 1 MKSIAISGSPRENVGKRDAKELRYAGKVPAVLYGGG-EQYHFAVSAADLKPLIYTPEVNF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I + I ++ Q P++D +IH DFL +S+ V++++P+ SPG+K Sbjct: 60 --VDLEISGKKYQAIVQEAQYHPLTDQIIHVDFLALSDDKAVSMNIPIALTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P I V L L++G S+ + + + + ++ + TI Sbjct: 116 MGGKLVQKLRKLRVKALPKDMPQVIEVSLESLEVGKSVRVGAVEV-KNAKILNNADDTIV 174 Query: 183 TIV 185 +++ Sbjct: 175 SVI 177 >gi|50955306|ref|YP_062594.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] gi|71153146|sp|Q6ADQ7|RL25_LEIXX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50951788|gb|AAT89489.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 200 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K++A +RD GKG+AR +R G+IPA+IYG+ S+P I L A + L N Sbjct: 1 MADESNKVAAEVRDSFGKGAARKIRAAGKIPAVIYGHGSEPVHITLPAHQVGLLLRKAN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L +DI + + KD Q DPV I+ H D L V G V V VPV E S Sbjct: 60 --AVLDIDIAGKTQLALVKDVQKDPVLQIIEHLDLLVVRRGEKVQVEVPVHVEGEPFS-- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + L A NIP+ I +D+ + G H +D LP ++ Sbjct: 116 ---GTIAMLDIPTIKLEVEATNIPERIVIDVTGAEEGTQYHAKDFALPAGAVLAEDEDLL 172 Query: 181 IATIVAP 187 + I+ P Sbjct: 173 LLNIIVP 179 >gi|56961862|ref|YP_173584.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus clausii KSM-K16] gi|68053067|sp|Q5WAD7|RL25_BACSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56908096|dbj|BAD62623.1| ribosomal protein L25 family general stress protein [Bacillus clausii KSM-K16] Length = 218 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 4/173 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R + LR G +P ++YG P+++ A K + L Sbjct: 4 LNARERKDQKAHQTKELRNQGHVPGVLYGKKVKSTPVSVEAVAFLKTFR-DVGQNGLFDL 62 Query: 68 DIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + HV+ ++ Q+DP+++ +H DF +V V+VPV E +PG K+GG Sbjct: 63 QLENGGKHHVMVQEVQIDPLNNQYMHVDFFEVDMNEERDVNVPVHL--EGDAPGAKEGGI 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +N + +E+++ C +IP+SITVD+++L IGDS+ + DIR + +++ + Sbjct: 121 VNHLLYEITVHCLPADIPESITVDISNLNIGDSLSVSDIRANVPVTIVNEDDE 173 >gi|254821212|ref|ZP_05226213.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium intracellulare ATCC 13950] Length = 221 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M K +L +R + GKG++R R++G+IPA++YG+ +DP+ + L D + L Sbjct: 1 MAAKTLNQLKVTVRAETGKGASRRARRDGKIPAVLYGHGADPQHLELPGHDFAAVLRH-A 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI + + K + P+ + HAD L V G V V V V + +P Sbjct: 60 GTNAVLTLDIEGKEQLALTKSLDIHPIRRTIQHADLLVVRRGEKVVVEVRVVIEG-DAAP 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + + + A +IP+ +TV + D + G I LP+ + +S + Sbjct: 119 GT----LVTQETSTIEVEADAMSIPEQLTVSVEDTEPGTQFTAGQISLPKGVNLISDPEM 174 Query: 180 TIATIV-API 188 + +V AP Sbjct: 175 LVVNVVNAPT 184 >gi|323344944|ref|ZP_08085168.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] gi|323094214|gb|EFZ36791.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] Length = 209 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 102/187 (54%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIAL----SAKDISKRLYS 57 KE +S R+ +GK ++++LRK G +P +YG D KP+AL ++ K +Y+ Sbjct: 1 MKEINVSGQKREDLGKKASKVLRKEGLVPCNLYGEAKQDGKPVALAFASPMSELRKIVYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I E I K+ Q PV+D L+H DF +V++ +T+ +PV+ + Sbjct: 61 PHIY--VIRLIIDGEEHTAILKELQFHPVTDALLHVDFFEVNDQKPITIGIPVKLVG--L 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++++ P IP+ + +D+ L IG SI + ++ E + Sbjct: 117 AQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTKLTIGKSIKVGELSY-EGLELATGK 175 Query: 178 NITIATI 184 ++ + +I Sbjct: 176 DVVVCSI 182 >gi|258513562|ref|YP_003189784.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] gi|257777267|gb|ACV61161.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] Length = 219 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 7/187 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ GKG + L G +PA++Y KP+ L A+ + L SK +++ L Sbjct: 12 LDAYPREGCGKGYSNKLFSKGYMPAVLYSKSIGSKPLELEARALEDVLKSKTGRNSVIDL 71 Query: 68 DI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-K 122 + G++ V+ KD Q P+ +HADFL++S V + V + E +PG+ + Sbjct: 72 HLKSGDGEDSYKVMVKDLQYHPIRRSYLHADFLEISLTDRVQIAAKVVLVGE--APGVAE 129 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+ + EV + C +IPD ITVD++ L IGDS+ + D++ ++ ++ +A Sbjct: 130 EGGILDQIIREVGVKCLPGSIPDIITVDVSKLYIGDSVAVMDLQAGPDIEILADEDLVVA 189 Query: 183 TIVAPIS 189 ++ P S Sbjct: 190 RVIPPQS 196 >gi|331694719|ref|YP_004330958.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] gi|326949408|gb|AEA23105.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] Length = 216 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q ++ A R + GKG+AR R+ G+IPA++YG+ +DP+ ++L + + ++ + + Sbjct: 1 MAQ--ARIDAETRTEFGKGAARRTRRAGKIPAVLYGHGTDPQHLSLPSLEFARVVR-EQG 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L ++IG + K + P+ + H D L + G V V V V E + Sbjct: 58 RNAVLEINIGGTPQLALTKTVVVHPIRPYIEHVDLLVIKRGEKVVVDVQVVVTGEAAA-- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + + + +IP+SI + + D++IG I + LP+ + + Sbjct: 116 ---GSMIAQELNTIEVEADVLSIPESIELSVQDVEIGTQILAGSVALPDGVTLQTDPEAL 172 Query: 181 IATIVA 186 + +VA Sbjct: 173 VVNVVA 178 >gi|326334560|ref|ZP_08200771.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693329|gb|EGD35257.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 200 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR G++P ++YG + + A +Y+ N T Sbjct: 1 MQSITIVGSQRESVGKAASKALRNAGKVPCVLYGGD-NTIHFSADALAFKNLVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+++G + I +D Q DPV+D +IH DF Q+ + +T+ VP++ + +PG+ Sbjct: 60 A--TIELGGKTYTAILQDIQFDPVTDKIIHVDFYQLHKDKEITLAVPIQIVG--TAPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L VV ++ + +N+PD + +D++ +++G+ ++ I+ + M N + Sbjct: 116 AGGTLRVVNRKLKVKSLPDNLPDFVPIDISWMEMGNRFYVTKIKQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|49482728|ref|YP_039952.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MRSA252] gi|71153662|sp|Q6GJH0|RL25_STAAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49240857|emb|CAG39524.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MRSA252] Length = 217 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 4/180 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LRK+G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIR-EVCRNGVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+VA Sbjct: 121 VEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVVA 180 >gi|313817232|gb|EFS54946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA2] gi|314961283|gb|EFT05384.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA2] gi|315086371|gb|EFT58347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA3] Length = 205 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 9/170 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N +L Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN---PLL 61 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++I + + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 62 SIEIEGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + Sbjct: 117 TIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLL 166 >gi|46579985|ref|YP_010793.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. Hildenborough] gi|120602603|ref|YP_967003.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris DP4] gi|71153142|sp|Q72BR0|RL25_DESVH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223678|sp|A1VDR0|RL25_DESVV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46449401|gb|AAS96052.1| ribosomal protein L25 [Desulfovibrio vulgaris str. Hildenborough] gi|120562832|gb|ABM28576.1| LSU ribosomal protein L25P [Desulfovibrio vulgaris DP4] gi|311234017|gb|ADP86871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris RCH1] Length = 190 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 8/193 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LS RD +GKG+ R LR +P + Y + + + AK + K L+ + Sbjct: 1 MS-EQKTLSVQKRDNLGKGANRRLRSEEVVPGVFYDTKGNNVAVQMPAKPLQK-LFEEVG 58 Query: 61 MTTILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 TT+ L+I +E V+ D P H DF V + + VP+ F+ Sbjct: 59 RTTVFQLEIEEEGKKSTHPVLIWDALFHPYKKKFTHIDFFGVDLDREIKIRVPLEFVG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 S G+K GGKL V + ++ +P IT+DL +L I +I ++D+ +PE + Sbjct: 117 TSRGVKLGGKLEVYREFIDVMSKPLTLPKKITLDLTELDINSTIMLKDVAMPEGVRPATN 176 Query: 177 LNITIATIVAPIS 189 N I +++ P S Sbjct: 177 ENFAILSVLTPKS 189 >gi|258404967|ref|YP_003197709.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] gi|257797194|gb|ACV68131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 10/192 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E +L A RD+VGK R +R+ G IP I Y D P+ + + + + Sbjct: 1 MS-EEIRLQAFKRDEVGKQGLRSVRQQGYIPGIYYDAKGDNVPVKVRYRALESAFRKAHS 59 Query: 61 MTTILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ L+I V+ D Q PV D+++H DF V + V +PV+ E Sbjct: 60 -NHVIQLEIANGGQGTPRPVMIWDIQHHPVKDLILHVDFFGVDMSKEIQVEIPVQIEGE- 117 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+ GG+L V + + C + IP++I +D++ L++ +++++ED+ PE + Sbjct: 118 -AQGVVDGGQLTVYHEALLVSCLPDAIPENIRIDVSALEMNENVNIEDVTFPEGVVPVYD 176 Query: 177 --LNITIATIVA 186 N +A + Sbjct: 177 GEENFAVAGVNP 188 >gi|254486127|ref|ZP_05099332.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] gi|214042996|gb|EEB83634.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] Length = 186 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLDPVS 87 +P I++G DP PI L + +L + F T+ + + + V VI +D Q V Sbjct: 1 MVPGIVFGGDVDPLPINLDFNKLLTKLRAGRFKATLFNMKVEGHDDVRVICRDVQRHVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H DF+++ + + + + V E + PG+K+GG L +V EV L+ A +IPD I Sbjct: 61 DLPTHVDFMRLKRTTKINLFIQVEVSGEEECPGLKKGGVLTLVRPEVELVVTAGDIPDHI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVD++ L+IGDS + ++ LPE + + + IA + AP Sbjct: 121 TVDISGLQIGDSATIANVVLPEGSKPVIDRDFVIAQVSAPSG 162 >gi|186681114|ref|YP_001864310.1| 50S ribosomal protein L25/general stress protein Ctc [Nostoc punctiforme PCC 73102] gi|226736342|sp|B2J8B8|RL25_NOSP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186463566|gb|ACC79367.1| transcriptional regulator, Fis family [Nostoc punctiforme PCC 73102] Length = 199 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 8/187 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ R + K R LR++G IPA +YG+ ++ + + AK + + L + T Sbjct: 2 TITVESLKRPEGSK--PRALRRSGLIPANLYGHKGTESISLTIEAKTVERLLKRVSVNNT 59 Query: 64 ILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q+ P H F V+ TV V +RF+ + G+ Sbjct: 60 LIELNIADAPWRGKALLRELQIHPAKGTPYHLSFFAVAGHGDTTVEVRLRFVG--TAVGV 117 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 KQ GG L+ V E+ + C NIPD I +D+ +L+IGDS+ + DI PE + +++L Sbjct: 118 KQEGGVLDTVITELQVSCAPENIPDVIEIDVTNLQIGDSLSISDIPFPEGVTPLAELERL 177 Query: 181 IATIVAP 187 + +++ P Sbjct: 178 VVSVLPP 184 >gi|206901159|ref|YP_002250500.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] gi|226736310|sp|B5YD92|RL25_DICT6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206740262|gb|ACI19320.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] Length = 207 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 10/195 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M+ E KL RDK+GK A+ R++ IP ++YG ++ + + + KD+ + + Sbjct: 1 MEITEIKLK--KRDKIGKQYAKKYRRSNLIPGVVYGAHLKENIHVLVEKKDLWNLIKKGH 58 Query: 60 FMT-TILTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 IL L I + I +D Q+DP+ D L+H DF VS V V+VPV + Sbjct: 59 SKEQHILRLIIEDGENTITENAILQDIQIDPIKDDLLHVDFHAVSLEEVVDVYVPVVLVG 118 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 E S G+KQGG L E+ + ++P I VD+ DL+IGDSI + D+ LPE + Sbjct: 119 E--SKGVKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGDSITVGDLNLPENIKVL 176 Query: 175 SQLNITIATIVAPIS 189 + + I I+ P Sbjct: 177 TPADEVIVNIIPPKG 191 >gi|193212458|ref|YP_001998411.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobaculum parvum NCIB 8327] gi|226736295|sp|B3QMQ8|RL25_CHLP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193085935|gb|ACF11211.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobaculum parvum NCIB 8327] Length = 201 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 10/191 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R+ V K A LR+ G +PA++Y + I++ + K ++S + Sbjct: 1 METRALSVNLRE-VKKNGAAKLRQQGMVPAVVYHKGEETVAISVDEIALDKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L + V KD Q DPV+D +IHADF + + V + VP+ E + G+ Sbjct: 58 HLIDLQYPDGKSVRAFIKDLQFDPVTDRVIHADFKRFTADEVVEMEVPIHVEGE--AVGV 115 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEK-TSSMSQL 177 K GGKL + H ++L N+P+ T+D++ L+ G S+H+ D++ +P + Sbjct: 116 KIGGGKLQINMHTLTLKGKPANMPEHFTIDVSALETGHSLHISDLQATVPAGTIEIIGDA 175 Query: 178 NITIATIVAPI 188 + I ++ AP Sbjct: 176 DAAIVSVAAPR 186 >gi|323359424|ref|YP_004225820.1| ribosomal protein L25 [Microbacterium testaceum StLB037] gi|323275795|dbj|BAJ75940.1| ribosomal protein L25 [Microbacterium testaceum StLB037] Length = 209 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ K+ A +R+ GKG AR LR G+IPA+IYG+ ++P+ +AL + + N Sbjct: 1 MS-EDNKVVAELRENFGKGFARRLRAAGKIPAVIYGHGTEPQHVALPGHQTALLIRRAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + V+ KD Q DPV I+ H D + V +G V V VPV + E S Sbjct: 59 --ALLDLDIAGKSQLVLVKDVQKDPVRQIIEHIDLIVVKKGEKVQVDVPVVVVGEPFS-- 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + VSL A +IP ++ VD+ + G I D++LP S +++ Sbjct: 115 ---GTIAMLDATTVSLEVEATHIPQNVEVDVEGAEDGTQITAADLKLPAGASLVTEPETL 171 Query: 181 IATIVAPI 188 I + P+ Sbjct: 172 IVGVSVPL 179 >gi|21674184|ref|NP_662249.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium tepidum TLS] gi|71153133|sp|Q8KCQ1|RL25_CHLTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21647347|gb|AAM72591.1| general stress protein Ctc [Chlorobium tepidum TLS] Length = 199 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R+ V K A LR+ GQ+PA++Y I++ ++K ++S + Sbjct: 1 METRALSVNLRE-VKKNGAAKLRRLGQVPAVVYHKGEATVAISVEEISLNKLVHSSE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L + V KD Q DPV+D +IHADF S V + VP+ E PG+ Sbjct: 58 HMIDLQYPDGKSVRSFIKDVQFDPVTDRVIHADFQLFSTDEVVEMEVPIHLEGE--CPGV 115 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLN 178 K GGK+ + H + L +P+ T+D++ L++G ++H+ D++ PE + + Sbjct: 116 KIGGGKIQINVHTLPLKGKPEAMPEHFTIDVSALELGQTLHIRDLQAIAPEGVQILGDAD 175 Query: 179 ITIATIVAPI 188 ++ ++VAP Sbjct: 176 TSVVSVVAPR 185 >gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] Length = 206 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQL 83 R+ G +P +IYG + IAL + +++ L+ + + I + I + H + ++ QL Sbjct: 24 RRAGLVPGVIYGGKQEAVLIALDPRIVARELHKPGWRSRIYDISIDGSKTEHALLREIQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD+ +H D+ +++EG V V V + F E SPGIK+GG LN+V H V ++ N+ Sbjct: 84 HPVSDVPLHVDYQRLAEGQKVHVEVSITFTGEEVSPGIKRGGVLNIVRHTVDVVADPANM 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVAPI 188 P+ + DL+ L I D++ ED++ E + + N IATI AP Sbjct: 144 PEGFSADLSKLDIHDNVRWEDLKGTEHVTPVQHIPNFVIATIAAPT 189 >gi|150020070|ref|YP_001305424.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho melanesiensis BI429] gi|166223727|sp|A6LJD8|RL25_THEM4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149792591|gb|ABR30039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosipho melanesiensis BI429] Length = 216 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 12/196 (6%) Query: 1 MDQKECKLSAVMRDKVGKG-SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q KL A+ R+ VGK + R LRK G IP ++YG +P I++ ++ K LY + Sbjct: 1 MAQ--HKLEALTRNVVGKKRAVRRLRKQGLIPGVVYGPDIEPLSISIKKSNLIKLLY-EV 57 Query: 60 FMTTILTLDIGKEL------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFI 113 +I++L + E V K+ Q D ++D + H DF +G T+ +++P+ FI Sbjct: 58 TEASIISLSVKDETGNEVFSHDVFIKNIQYDKLTDEVKHIDFYAPEKGHTMNINIPLEFI 117 Query: 114 NENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 K G+++GG + ++ HE+ + + I + + +D+++L +G+S H+ D++LP ++ Sbjct: 118 G--KPKGVEKGGIVEIIHHELPVETLPSVIVEKLEIDISNLDLGESFHVSDLKLPTGMTA 175 Query: 174 MSQLNITIATIVAPIS 189 N + TI P Sbjct: 176 ELPENEPLVTIAIPRG 191 >gi|326332302|ref|ZP_08198582.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] gi|325950008|gb|EGD42068.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] Length = 208 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K+ A R + GKG+AR +R+ +IPA++YG+ +DP + L L + Sbjct: 1 MSSE--KIVAEKRTEFGKGAARRIRRENKIPAVVYGHGADPIHLTLPGHATMMALKH-HG 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + + K Q+D V ++ H DF+ V G VTV + V + + S Sbjct: 58 ANALLELDIDGKKQLALTKQVQVDDVRRVIEHVDFVAVRAGEKVTVDIVVNVVGDAAS-- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + +++ A ++P+S+ + + L+IG I + LP+ T+ ++ Sbjct: 116 ---GTMVVTDANTLTVEAEATHVPESLEISIEGLEIGTQILAGQVELPKGTTLVTDPETL 172 Query: 181 IATIV 185 + I Sbjct: 173 VVNIT 177 >gi|226307812|ref|YP_002767772.1| 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] gi|259646694|sp|C1A348|RL25_RHOE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226186929|dbj|BAH35033.1| probable 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] Length = 202 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D ++ L ++ Sbjct: 1 MS-EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFARILRAQ-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + K + P+ + HAD L + +G VT+ V V + + + Sbjct: 59 TNAILTLDIEGTEQVALTKSVVVHPIRSYIEHADLLVIKKGEKVTIDVHVVVVGDAAA-- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +S+ A +IP+ I V + L+IG I + LP + + + Sbjct: 117 ---GTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPAGSVLQADADTL 173 Query: 181 IATIVA 186 I +VA Sbjct: 174 IVNVVA 179 >gi|325000632|ref|ZP_08121744.1| 50S ribosomal protein L25 [Pseudonocardia sp. P1] Length = 231 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++ A R + GKG+AR R+ G+IPA++YG+ +DP ++L + + + + + + Sbjct: 3 QTRIPAENRTEFGKGAARRTRRAGKIPAVLYGHGTDPVHLSLPSLEFAAVVRDQ-GRNAV 61 Query: 65 LTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L LD+ + + K + P+ + H D L + G V V + V + Sbjct: 62 LELDVDGSKPQLALTKTVVVHPLRPYIEHVDLLVIKRGEKVEVELDVVVTGDAAP----- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + + V + A NIP++I V + + +IG + +D+RLP + + Sbjct: 117 GSLVTQDLNTVLVEADALNIPENIEVSVEEAEIGTQYYAKDLRLPNGVELRTDEEYLVVQ 176 Query: 184 IVA 186 +V Sbjct: 177 VVP 179 >gi|255536668|ref|YP_003097039.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacteriaceae bacterium 3519-10] gi|255342864|gb|ACU08977.1| LSU ribosomal protein L25p [Flavobacteriaceae bacterium 3519-10] Length = 211 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG ++ + + +Y+ T Sbjct: 1 MKSITIQGTKRENVGKKSTKALRDAELVPCVVYG-GAETLNFSAEERSFKGLVYTPEAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ + + +D Q P++D ++HADF Q+ E V + VPVR +S G+ Sbjct: 60 --VSIEVDGNTIPAVLQDIQFHPLTDKILHADFYQLDENKPVVMEVPVRLTG--RSKGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + ++ L N+PD I VD+ LKIG +++ DI E + M N + Sbjct: 116 AGGAMRQSFRKLKLKALPANLPDEIVVDVTPLKIGSKLYVGDIPT-ENFTFMHPDNAVVV 174 Query: 183 TIVAPISGS 191 + + S Sbjct: 175 AVKMSRTAS 183 >gi|169825682|ref|YP_001695840.1| 50S ribosomal protein L25 [Lysinibacillus sphaericus C3-41] gi|226736335|sp|B1HSV6|RL25_LYSSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168990170|gb|ACA37710.1| 50S ribosomal protein L25 (General stress protein CTC) [Lysinibacillus sphaericus C3-41] Length = 198 Score = 174 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN ++ Sbjct: 2 STVLSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSIQ-KNGQNSV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +LD+ + V+V+ + Q + D + H DFL ++ + V VP++ I + S G+ +G Sbjct: 61 FSLDLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEVDVPIKLIGQ--SVGVSEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + TI Sbjct: 119 GILMQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRHQTPVEIISEDDYLLVTI 178 Query: 185 VAPISGS 191 VAP+S Sbjct: 179 VAPVSAE 185 >gi|91217230|ref|ZP_01254191.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] gi|91184573|gb|EAS70955.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] Length = 206 Score = 174 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P +IYG + A S +K +Y+ + T Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGEVPCVIYGGD-NIVHFAASEVSFNKLIYTPDVHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ DI + +D Q PV+D ++H DF + SEG +T+ +PV +E G+K Sbjct: 60 VVV--DIDGNKTTAVLQDIQFHPVTDDILHIDFYEFSEGQEITMEIPVH--SEGSPKGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + A N+PD I D+ LKIG +++ + E M N I Sbjct: 116 NGGVLRFNLRRMMVRGLAKNLPDFILADVTPLKIGQKMYVTAVAN-EGYKIMHPDNTVIC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|330993035|ref|ZP_08316973.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] gi|329759805|gb|EGG76311.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] Length = 205 Score = 174 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 2/165 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG-KELVHVIPKDYQL 83 R+ G +P +IYG +P IAL + + + L+ + + I + + VH + ++ QL Sbjct: 24 RRAGLVPGVIYGAGQEPVLIALDPRIVYRELHKSGWRSRIYDISVEKGASVHALLREVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD IH D+ +++ G V V V +RF E SPG+K+GG +N+V H V ++ NI Sbjct: 84 HPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVKRGGVMNIVRHTVDVVVDPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATIVAP 187 P+ T DL+ L D++ ED++ E + + N IA + P Sbjct: 144 PEFFTADLSKLDFHDNVRWEDLKGTENVTPVQHDNNFVIANVAPP 188 >gi|224373133|ref|YP_002607505.1| 50S ribosomal protein L25/general stress protein Ctc [Nautilia profundicola AmH] gi|254801057|sp|B9LA47|RL25_NAUPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223589444|gb|ACM93180.1| ribosomal protein L25, Ctc-form [Nautilia profundicola AmH] Length = 178 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + LR++G + A IYG + A D K L +K + + + Sbjct: 2 LEGIIRESTSKAETKKLRRDGYLIANIYGKGQENINAAFKTGDFIKYLRNKEHL--VFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V V+ ++YQ PV+ L+H D L +G HVP++ G+K G L Sbjct: 60 KVGDKEVKVVVQEYQKHPVTGELLHVDLLMAQDGVKSYYHVPIKVKG--TPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + N+PD +D+ +L +GD+I + DI +PE +I + ++ Sbjct: 118 IYHRRRIKVKAAPENLPDFFELDVTNLDVGDNILIRDIEMPEGVECFLNPSIPVVGVI 175 >gi|325280762|ref|YP_004253304.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] gi|324312571|gb|ADY33124.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] Length = 190 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 6/179 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R +GK + LLR G++P ++YG + ++ KD+ K LY+ I+ Sbjct: 4 FELQGELRTDLGKKATNLLRAEGKVPCVLYG-GKENVHFSVVEKDLQKLLYTPVVY--IV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + + ++ Q PVSD ++H DF Q+SE V + VPV+ + + G++ GG Sbjct: 61 KVNVAGQSYEAVMREIQFHPVSDRVLHMDFYQISEDKPVIMEVPVKL--QGFAEGVQAGG 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 KL++V ++ + N+P I +D+ +L +G SI ++D+ E ++ + +A I Sbjct: 119 KLSLVVRKLKVKAIPANLPGEIVLDVTNLGLGKSIKVKDLSF-ENFEIVNAKEVVVAQI 176 >gi|288928358|ref|ZP_06422205.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] gi|288331192|gb|EFC69776.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] Length = 200 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 96/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 +E ++ R +GK +++ +RK G IP +YG + A+ D+ K +Y Sbjct: 1 MREINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGLPEALSFAVPMADLRKVVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ LDI + I K+ Q PV+D L+H DF +++E ++ + +PV + Sbjct: 61 TPHIY--VVNLDIDGQKHTAIMKELQFHPVTDALLHVDFYEINEEKSIAIGIPVNLVG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG+L++ ++ + P IP+ + +D+ L IG SI ++ E ++ Sbjct: 117 LAQGVRDGGRLSLSIRKLMVKAPYKQIPEKLDIDVTALTIGKSIKAGELSF-EGLEVVTP 175 Query: 177 LNITIATI 184 ++ + T+ Sbjct: 176 KDVIVCTV 183 >gi|257068516|ref|YP_003154771.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] gi|256559334|gb|ACU85181.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] Length = 203 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K L+ +R+ GKG++R LR ++PA++YG+ P ++L D + + N Sbjct: 1 MAEK---LNVELREDFGKGASRRLRAENRVPAVLYGHGEAPLHLSLPGHDTALAARNPN- 56 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L L + + K+ Q P+ L H D + V +G V V +PV E +P Sbjct: 57 --ALLELALSDGTKHLALIKEIQRHPLKRSLNHLDLITVRKGEKVEVEIPVILTGEPVAP 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + V ++L A N+P+ + + + D + G + D+ LPE + ++ I Sbjct: 115 AVAF-----VDLQTLTLSVDALNVPEQVEISVEDTEDGYQLFAGDVTLPEDSELVTDAEI 169 Query: 180 TIATIVAPI 188 + ++ P Sbjct: 170 LVVSVAVPR 178 >gi|323700583|ref|ZP_08112495.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. ND132] gi|323460515|gb|EGB16380.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans ND132] Length = 206 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 7/185 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+ R ++GKG R LR +G +P I Y P+ + + K Y+ + + Sbjct: 5 LKLNVQERSEMGKGPNRRLRASGMVPGIYYDAKGANIPVKVQMVPLQKT-YAAVGNSQVF 63 Query: 66 TL--DIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + G + + + +PV + H DF V + V VP + S G+ Sbjct: 64 ELVLERGGKTETMPALLWRVRNEPVKGVPEHVDFFGVDLTKEIKVAVPFEIVG--NSKGV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG + + ++C +IP++I +D+ DL + D +H+ED+ PE + + + N I Sbjct: 122 KLGGVMEQYREHIEVICKPMDIPEAIVIDITDLDVMDHVHIEDVTFPEGVTPVFEENFAI 181 Query: 182 ATIVA 186 +I A Sbjct: 182 LSIAA 186 >gi|89890034|ref|ZP_01201545.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] gi|89518307|gb|EAS20963.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] Length = 211 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G +P +IYG +P K +Y+ + MT Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGLVPCVIYGGD-EPVHFQAEEKAFKNLVYTSDAMT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L + I +D Q PV + L+HADF Q+ + VT+ VPV + S G+ Sbjct: 60 VVIDLGKDGQ-YAAIAQDMQWHPVKEQLLHADFYQIFDDKPVTMEVPVVTVG--TSRGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD I VD+ +KIG+ ++ D+R+PE M ++ + Sbjct: 117 NGGVLRRNNRRLKVKAIPANLPDLIEVDIAPMKIGNKKYVRDLRVPE-YEIMHPDSVVVV 175 Query: 183 TI 184 I Sbjct: 176 MI 177 >gi|296128741|ref|YP_003635991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] gi|296020556|gb|ADG73792.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] Length = 197 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR LR+ QIPA++YG+ + P +AL D L N Sbjct: 1 MSEIKLAATARTEFGKGAARRLRRAHQIPAVLYGHGTQPLHVALPGHDTMLALKHSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++++ I KD Q D V ++ H D L V +G V V V V+ + E+ S Sbjct: 58 ALYSIELDGTSTLAIVKDVQRDVVRQVIEHVDLLIVKKGEKVAVDVQVQVVGESAS---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G V +SL A N+P+S+ + ++ L+ G + ++ LPE + +S I Sbjct: 114 -GTIHVVETQTLSLEALATNLPESVEISIDGLEAGTIVTAGEVTLPEGATLLSDPEQAIV 172 Query: 183 TIVAP 187 I P Sbjct: 173 AISEP 177 >gi|149194451|ref|ZP_01871548.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] gi|149135626|gb|EDM24105.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] Length = 178 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + + LR++G + A IYG + A D K + +K + I + Sbjct: 2 LEGIIRESTSKSATKKLRRDGYLIANIYGKGQENINAAFKKSDFIKYMRNKEHL--IFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + ++YQ DPV+ L+H D L +G +VP++ G+K G L Sbjct: 60 KVGNKEFKAVVQEYQKDPVTGDLLHVDLLIAQDGVKQYFYVPIKVKG--TPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + +PD +D+++L +GD+I + DI PE +I I ++ Sbjct: 118 VYHRRRIKVKSTPEKLPDYFELDVSNLDVGDNILIRDIEFPEGVECYLNPSIPIVGVI 175 >gi|239907580|ref|YP_002954321.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] gi|259646684|sp|C4XHR1|RL25_DESMR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239797446|dbj|BAH76435.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] Length = 192 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q + L+ R +GKG+ R LR + +P + Y P+ + + K LYSK Sbjct: 1 MSQTQ-SLAVKTRAGLGKGACRKLRADDMVPGVYYDAKGVNVPVMVEHLPLQK-LYSKIA 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L I E + + P + H DF V + V VPV + KS G Sbjct: 59 SSHVFDLQIEGETKPALVWKVEHHPTKPRITHVDFYGVDLTKEIQVRVPVEVVG--KSKG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +GG+L + + +LC IPD I +D+ ++ I +SI + D+ LPE ++ N Sbjct: 117 QVKGGQLEIHREFIEVLCLPLVIPDKIVLDITNVDINESILIADVVLPEGVKAVYDNNYA 176 Query: 181 IATIV 185 + ++ Sbjct: 177 VIGVL 181 >gi|260577723|ref|ZP_05845658.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] gi|258604118|gb|EEW17360.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] Length = 219 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ +L Sbjct: 10 TRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNEGV-NAVL 68 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ K + ++ + HAD L V G V V VPV F + G Sbjct: 69 ELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVVFTGQAAP-----GA 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +++L NIP+ ITVD+ +IGD I D+++P S +S+ + I +V Sbjct: 124 LVTQEADVITILADVLNIPEEITVDVEGKEIGDQILAGDLQMPGNASLVSEEDTLIINVV 183 >gi|148265701|ref|YP_001232407.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter uraniireducens Rf4] gi|189042359|sp|A5G7R6|RL25_GEOUR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146399201|gb|ABQ27834.1| LSU ribosomal protein L25P [Geobacter uraniireducens Rf4] Length = 194 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E L+ +R K GKG +R LR+N IP ++YG + P++LS K++S + + Sbjct: 1 MEERVLNVELRTKTGKGISRQLRRNNFIPGVVYGKGMESVPVSLSTKELSTAIAGEGGRN 60 Query: 63 TILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LTL G L VI + D + H D +++ V V VPV + + G Sbjct: 61 HLLTLKGGGGLDGQMVIVAELLQDCLKGTPRHVDLHKINMADKVRVKVPVNLVG--SAVG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+ HE+ + C +IP+ I VD+ +L IG S+H+ DI+ + ++ Sbjct: 119 VKEGGLLDFAMHEIEIECFPTHIPEHIDVDVTELTIGHSLHIGDIKELPGIKVLGDATVS 178 Query: 181 IATIVA 186 + +I+ Sbjct: 179 VVSILG 184 >gi|227537439|ref|ZP_03967488.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242713|gb|EEI92728.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 198 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ Sbjct: 1 MKSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQ-THLSVSAADLKPVLYTPEV-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + LDI + I +D Q P++D++IH DFL++S+ V+V++PV SPG+K Sbjct: 58 VFVELDINGKKSKAIVQDAQFHPLTDLVIHIDFLELSDDKEVSVNIPVTLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + NN+P SI V + L++G S+ + ++L + ++ + TI Sbjct: 116 MGGKLVQKLRTLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL-KDAKILNNSDDTIV 174 Query: 183 TIV 185 ++V Sbjct: 175 SVV 177 >gi|300770848|ref|ZP_07080725.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] gi|300762121|gb|EFK58940.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] Length = 198 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ Sbjct: 1 MKSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQ-THLSVSAADLKPVLYTPEV-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I + I +D Q P++D++IH DFL++++ V+V++PV SPG+K Sbjct: 58 VFVELNIDGKKSKAIVQDAQFHPLTDLVIHVDFLELNDDKEVSVNIPVTLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + NN+P SI V + L++G S+ + ++L + ++ + TI Sbjct: 116 MGGKLVQKLRKLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL-KDAKILNNSDDTIV 174 Query: 183 TIV 185 ++V Sbjct: 175 SVV 177 >gi|311028983|ref|ZP_07707073.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] gi|311032295|ref|ZP_07710385.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] Length = 213 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 103/183 (56%), Gaps = 7/183 (3%) Query: 8 LSAVMRDKVGKGSAR-LLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + KGS++ +R+ G IPA++YGN ++ K I + +K+ K + + I++ Sbjct: 4 LHANERTEF-KGSSKTKIREEGLIPAVVYGNDTENKSITVDSKEFIKTIR-ETGRNGIIS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+IG + V+ DYQ++P+ +H DF V+ S + V V V + G+K GG Sbjct: 62 LEIGSDKRKVMLYDYQINPLKSLEFVHLDFHVVNFKSEIDVDVTVHVTG--DAKGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V HEVS+ N++P+SI VD+ +L + ++I + D++ K S + + +A+I+ Sbjct: 120 VLQQVLHEVSIKALPNDVPESIDVDVTELDVNENITIGDLK-SGKYSFNHEDDEVVASIL 178 Query: 186 API 188 P Sbjct: 179 PPR 181 >gi|300858120|ref|YP_003783103.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|300685574|gb|ADK28496.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|302205841|gb|ADL10183.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis C231] gi|302330399|gb|ADL20593.1| 50S ribosomal protein L25/ general stress protein Ctc [Corynebacterium pseudotuberculosis 1002] gi|308276076|gb|ADO25975.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis I19] Length = 205 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 7/180 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 +SA R + GKG AR LR GQ+P +IYG + P ++ ++ L + +L Sbjct: 6 TISAQPRTEFGKGFARRLRAAGQVPGVIYGADIESPIHFSVDILEL-HALLRAHGSNAVL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI E + K + ++ H D L + G V V VPV E +PG Sbjct: 65 DLDIEGEKHLTMVKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVALQGE-TAPGT---- 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + +IP+ I + L++ + D+ LP T+ ++ IAT+ Sbjct: 120 TLIQDADTVLVEADVLSIPEEIAFSVEGLEVDAKVLAGDLSLPANTTLVADPEFVIATVS 179 >gi|332883267|gb|EGK03550.1| 50S ribosomal protein L25 [Dysgonomonas mossii DSM 22836] Length = 192 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K +L R +GK + + RK +IPA+IYG + ++ D+ K +Y+ Sbjct: 1 MKTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGDQTEAIAFTVTNSDVRKLIYTPEIF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L IGK+ I KD Q+ PV+D ++H DFL V EG + + VPV I + + G+ Sbjct: 61 --LVNLTIGKDSYKAILKDVQVHPVTDAILHLDFLHVFEGKPIVMDVPV--ILDGLAEGV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GGKL++ ++ + + IP+ + VD+ L +G SI + ++ E ++ N + Sbjct: 117 KAGGKLSLDLRKIKVKALYDKIPEKVHVDVTSLALGKSIQVGELHF-EGLELLNAKNAVV 175 Query: 182 ATI 184 + Sbjct: 176 CRV 178 >gi|227504123|ref|ZP_03934172.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] gi|227199280|gb|EEI79328.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] Length = 211 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R++ GKG AR LR G++P ++YG+ D A+ +++ L + Sbjct: 1 MANTRPVLKAEVRNEFGKGFARRLRVAGKVPGVVYGHAVDVLHFAVDRIELT-ALVRAHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L++ E V+ K + ++ + H D L + G V V VPV E +PG Sbjct: 60 VNAVFELELEGEQHLVMVKHVDQNVLTLDIDHIDLLSIKRGEKVEVEVPVTLEGEP-APG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +V+ + NIP+ I+V + L+ G + DI LPE T+ ++ Sbjct: 119 LMFIQDADVLL----VEADVLNIPEEISVSIEGLEDGAVVTAGDITLPEDTTLVADAETI 174 Query: 181 IATIVAP 187 IA+I P Sbjct: 175 IASISLP 181 >gi|126662578|ref|ZP_01733577.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] gi|126625957|gb|EAZ96646.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] Length = 200 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + +R G +P +IYG P + +Y+ N T Sbjct: 1 MKSITIKGSERENVGKKATKAVRDAGMVPCVIYGGNQ-PVHFVADERAFKDLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ +VI +D Q PVSD ++H DF +S+ + + VPV+ SPG+ Sbjct: 60 VVIELN--GASHNVIMQDIQFHPVSDKILHIDFFNLSDDKEIVMEVPVKITG--TSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + + N+PD + +++L++G+ +++ + M N + Sbjct: 116 LGGVLRLNQRRLKVKALPKNLPDFVEASISELQMGNKLYVTKLET-NNFKLMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|157363317|ref|YP_001470084.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga lettingae TMO] gi|157313921|gb|ABV33020.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga lettingae TMO] Length = 216 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 +L A++R++ GK S R +R G IPA++YG ++P I L+ ++ K L + + Sbjct: 1 MRLKAMLRNERGKRSVRKMRAKGLIPAVVYGPETEPLSINLNKSEVEKLLAKASEALPVG 60 Query: 65 --LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + D E + V K Q+D V+D ++H DF + ++G T+ ++VP+R K+ G++ Sbjct: 61 LEIKYDDRSEEMEVFIKKVQVDKVTDEIVHIDFYKPAKGHTMKINVPIRVFG--KAIGVE 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V +E+ + + + D I +D+ L++G S+H++D+RLP ++ + Sbjct: 119 KGGILEIVHNELPVETLPSALIDHIEIDVTHLELGQSVHVKDLRLPSGMKALLHPEEALV 178 Query: 183 TIVAPIS 189 TIV P Sbjct: 179 TIVVPRG 185 >gi|126653272|ref|ZP_01725383.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589946|gb|EAZ84075.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 198 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 3/187 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN ++ Sbjct: 2 STVLSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSIQ-KNGQNSV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +LD+ + V+V+ + Q + D + H DFL ++ + VP++ + + S G+ +G Sbjct: 61 FSLDLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEADVPIKLVGQ--SVGVSEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + TI Sbjct: 119 GILMQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRNQTPVEVISEDDYLLVTI 178 Query: 185 VAPISGS 191 VAP+S Sbjct: 179 VAPVSAE 185 >gi|157828786|ref|YP_001495028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933514|ref|YP_001650303.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. Iowa] gi|166223715|sp|A8GSZ5|RL25_RICRS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042367|sp|B0BUI7|RL25_RICRO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157801267|gb|ABV76520.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908601|gb|ABY72897.1| LSU ribosomal protein L25P [Rickettsia rickettsii str. Iowa] Length = 203 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFL-EKKTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|171910045|ref|ZP_02925515.1| 50S ribosomal protein L25/general stress protein Ctc [Verrucomicrobium spinosum DSM 4136] Length = 224 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 4/187 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K L A +R G + + LRK G IPA+IYG + +++K + + Sbjct: 3 KILDLQAKVRTAEGTSAVKRLRKAGSIPAVIYGKKHSNAKVEVNSKTFTAIIEHSASDNI 62 Query: 64 ILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L I E + ++ Q D + ++H DF V+ + VPV + Sbjct: 63 LVNLKIDGEANDALALVQEVQHDYLRGGILHVDFHAVAADEDIHAAVPVVLSGIEAAE-- 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GGKL V H + + C ++P+SI +D++ L +G++ H+ ++ LPE SS + ++ + Sbjct: 121 KKGGKLEFVLHSLEVHCLPKDLPESIALDVSYLNVGEATHVSELALPEGVSSKLEGDVVV 180 Query: 182 ATIVAPI 188 A + P+ Sbjct: 181 AILKEPL 187 >gi|313680824|ref|YP_004058563.1| LSU ribosomal protein l25p [Oceanithermus profundus DSM 14977] gi|313153539|gb|ADR37390.1| LSU ribosomal protein L25P [Oceanithermus profundus DSM 14977] Length = 212 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A R+ ++LR+ G++P I+Y K + + + K + + Sbjct: 2 EYKLKAYYRESEK---PKVLRREGKLPGIMYNKNV-NKKLYVHLGEFDKVFRNAGVH-HV 56 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +TL++ E V + + QLD H DF +++G T+ ++V ++F+ E + G+K Sbjct: 57 ITLELPDGETVDTVVRQVQLDKRRRRPEHVDFYVLTKGQTLDMYVNLKFVGE--AKGVKL 114 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L+ ++ + NIP I VD+++L+IGD +H D+ LPE ++ +AT Sbjct: 115 GGVLSTPLTDLEVRVLPRNIPGFIEVDVSELEIGDVLHASDLALPEGVELLTDPEAVVAT 174 Query: 184 IVAP 187 +V P Sbjct: 175 VVPP 178 >gi|300774725|ref|ZP_07084588.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] gi|300506540|gb|EFK37675.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] Length = 214 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG + P + K +Y+ T Sbjct: 1 MKSITIQGTKRESVGKKSTKALRDAELVPCVVYGGGA-PLNFSAEEKAFKGLVYTPEAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ + + + +D Q P++D ++HADF Q+S+ V + VPVR +S G+ Sbjct: 60 --VSIEVDGKTIPAVLQDIQFHPITDKILHADFYQLSDDKPVIMEVPVRITG--RSKGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD I VD+ L+IG+ +++ I+ E S M N + Sbjct: 116 AGGVLRQSFRKLKVKAIPANLPDEIVVDVTPLRIGNKLYIGGIKT-EGYSFMHPDNAVVV 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|229586949|ref|YP_002845450.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia africae ESF-5] gi|259646695|sp|C3PP47|RL25_RICAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|228021999|gb|ACP53707.1| 50S ribosomal protein L25 [Rickettsia africae ESF-5] Length = 203 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|194334300|ref|YP_002016160.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris aestuarii DSM 271] gi|226736350|sp|B4S8X6|RL25_PROA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194312118|gb|ACF46513.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prosthecochloris aestuarii DSM 271] Length = 201 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 9/190 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+ R K A+ LR G++PA++Y N D + I ++ + K ++S + Sbjct: 1 METIVLAVEPRT-CSKNEAKTLRTEGKVPAVVYHNGEDNQHICVNELALEKLVHSPE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L+ + + KD Q DPV+D +IHADF S G + + VPV F + PGI Sbjct: 58 HIINLEFPDGKNRRSLIKDVQFDPVTDKVIHADFQFFSAGEVLEMEVPVTFTGKG--PGI 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEK-TSSMSQLN 178 + GG+L + H +++ ++IPD IT+D++ +++G+++H+++I + + + Sbjct: 116 EAGGRLQALVHALTVKGVPSSIPDHITLDISAMELGETMHIKEIPAEIAAGKFEFVGEPE 175 Query: 179 ITIATIVAPI 188 + +I AP Sbjct: 176 TPVVSITAPR 185 >gi|189462542|ref|ZP_03011327.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] gi|189430703|gb|EDU99687.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] Length = 198 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 98/188 (52%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG------NMSDPKPIALSAKDISKRLY 56 K ++ +R + GK +A LR+N +P ++YG ++ + K +Y Sbjct: 1 MKSIEIKGSLRTETGKKAAHSLRQNNGVPCVLYGMQKDENGNQVATHFTVTVDGLRKLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DFLQ++E + + + VPV+ E Sbjct: 61 TPHIY--VVDLNIDGKIVNAIMKDIQFHPVTDAILHVDFLQINEENPIVMEVPVQL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GGKL + ++ + N IP+ + V++ +L +G +I + ++ E + ++ Sbjct: 117 LAEGVKAGGKLALQTRKLKVKALYNLIPERLVVNVTNLGLGKTIKVGELNY-EGLTLLNA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|317507883|ref|ZP_07965581.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] gi|316253812|gb|EFV13184.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] Length = 207 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A +R + GKG++R R++GQ+PA++YG+ ++PK L AK+ ++ L + N Sbjct: 3 ETARVEATVRTEFGKGASRRARRDGQVPAVLYGHGAEPKHFNLPAKEFARVLRA-NGTNA 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +++L G E I K + P L H D V G + V VPV + S Sbjct: 62 VVSLTAGGEEHLAITKLVVVHPTKSYLQHIDLQIVRRGERIAVEVPVVVVGTPIS----- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + + A +IP+ I V ++ L+IG I ++ LP+ S + Sbjct: 117 GGVLQHEATVLPVEAEALHIPEQIEVSIDGLEIGSKILAGELELPQGVSLTGDSEQLVVQ 176 Query: 184 IVAPISG 190 I + Sbjct: 177 INEARAA 183 >gi|325110027|ref|YP_004271095.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] gi|324970295|gb|ADY61073.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] Length = 211 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL A R++VG + + LR G+ P +YG+ + A+ A+ + + S + Sbjct: 1 MSN-DPKLVAAERNEVGTNATKRLRNEGRTPGTLYGHNEGTRHFAVEAEALQPIIASGH- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L+IG + +D Q D S ++H D L+V+E VT V + +PG Sbjct: 59 --KVVDLEIGGATEKTMIQDVQWDTFSQYVLHFDLLRVNEKERVTTDV--ELVTRGIAPG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L +V H + + CP +P+ +T+ +N L+IGDSI + D+ LP ++ Sbjct: 115 VLAGGILELVHHSLPIECPVIRLPEQVTLRINKLQIGDSITVGDLELPTDVTTSLPPEEV 174 Query: 181 IATIVAPISG 190 + IVAP + Sbjct: 175 LVHIVAPKAA 184 >gi|291456700|ref|ZP_06596090.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] gi|291381977|gb|EFE89495.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] Length = 218 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL +R++ GKG AR LR +IPA IY +DP + L ++ + L N + Sbjct: 13 TIKLEGEVRNEFGKGVARRLRVANKIPATIYAGGADPAFVTLPMRETTLALRHTN---AL 69 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T++ G E + KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 70 FTIEFGGESKMAVVKDVQKNPVKRIIEHIDFFEVKAGEKIDVEVPVFVEGTPKGAAVAF- 128 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + +N+P+ I V++ L G + +DI LPE + ++ T Sbjct: 129 ----VDIQELKVRADISNLPEKIVVNVEGLTDGTKVFAKDIELPEGAELDVEHAEESVVT 184 Query: 184 IVAP 187 I P Sbjct: 185 IEVP 188 >gi|120437821|ref|YP_863507.1| 50S ribosomal protein L25/general stress protein Ctc [Gramella forsetii KT0803] gi|166223685|sp|A0M745|RL25_GRAFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|117579971|emb|CAL68440.1| 50S ribosomal protein L25 [Gramella forsetii KT0803] Length = 220 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 4/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR GQ+P ++YG DP A +Y+ + T Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGQVPCVLYGVEGDPLHFAAEEISFKNLVYTPDVHT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L E I +D Q P++D ++H DF Q+ +T+ +P+ E + G+K Sbjct: 61 VKIKLK-SGESYDAILQDIQFHPLTDAILHIDFYQIFGEKPITMEIPIH--TEGVARGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + ++PD I +++ LKIG +++ + + N I Sbjct: 118 NGGVLRYNLRRLKVRGLPADLPDYIVANVSKLKIGQKLYVTGVD-SKDFVIQHPDNTVIC 176 Query: 183 TI 184 + Sbjct: 177 QV 178 >gi|146298888|ref|YP_001193479.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium johnsoniae UW101] gi|189042357|sp|A5FKV4|RL25_FLAJO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146153306|gb|ABQ04160.1| LSU ribosomal protein L25P [Flavobacterium johnsoniae UW101] Length = 203 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR G +P ++YG + A +Y+ N T Sbjct: 1 MKSITIKGSERESVGKVSTKALRNAGAVPCVLYGGNQA-VHFSADAAAFKNLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L + + I +D Q+ PV+D ++H DF Q+ + +T+ VPV+ + S G+ Sbjct: 60 VVIEL-GKGKSFNAILQDIQVHPVTDKILHIDFFQLFDDKEITMEVPVKIVG--TSKGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD + D+ L++G+ +++ + PE M N +A Sbjct: 117 AGGVLRLNQRKLKVKALPANLPDFVEADITPLEMGNKLYVTKVGKPE-YKIMHPDNTVVA 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|218885592|ref|YP_002434913.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226736309|sp|B8DKL6|RL25_DESVM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218756546|gb|ACL07445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 191 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 7/187 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 LS RD +GKG+ R LR +P + Y PI + + K L+ TT+ Sbjct: 6 TLSVRKRDGLGKGANRKLRAKTLVPGVFYNAEGLNVPIEMDTLPVEK-LFEAVGRTTVFN 64 Query: 67 LDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ K + Q PV + H DF V V + VP+ F + G+K Sbjct: 65 IEVDDNGTKSTHPALFWQIQYHPVKNRFSHIDFRGVDLEKPVKIRVPLEFTG--TAKGVK 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL V + + +P IT+DL DL+IG +I + D+ L E +++ N I Sbjct: 123 VGGKLEVYREALDISAKPLQMPSKITIDLTDLEIGKTISVNDLPLGEGVCAVADRNFAIV 182 Query: 183 TIVAPIS 189 +V+P Sbjct: 183 AVVSPKG 189 >gi|304405246|ref|ZP_07386906.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] gi|304346125|gb|EFM11959.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] Length = 227 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 6/184 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 L+ R K R LR G++P +IYG+ P IAL+ +D+ L + + Sbjct: 3 IPLTVEARATRTKRELRELRGQGKVPGVIYGSGLAGPTLIALAERDLLPLLRTH--PNAV 60 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + + G V+ + Q DP+S ++H D Q++ + HV + S G+++ Sbjct: 61 LDVAVPGGLKEPVVISEVQRDPLSHQVVHIDLHQINMNEKLKTHVRLEVTG--DSTGVRE 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L ++ HE+ + C N +P+ I +++ L +G+++ + D+ LP + S + + T Sbjct: 119 GGILTLMLHELEIECLPNQLPEVIEINVASLGVGENLLVSDLTLPAGVTVRSDADQVVVT 178 Query: 184 IVAP 187 I+AP Sbjct: 179 ILAP 182 >gi|284051744|ref|ZP_06381954.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira platensis str. Paraca] gi|291572085|dbj|BAI94357.1| 50S ribosomal protein L25 [Arthrospira platensis NIES-39] Length = 201 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 8/190 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R K R LR+ G IPA++YG+ ++ + + + AK + T Sbjct: 2 EITVKCQKRPSGSK--PRALRREGLIPAVLYGHKGAESEELTIDAKTAENLMKKGAVNHT 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q P H F + +V V +P+ FI E G+ Sbjct: 60 LIQLNIPDLSWAGKALLREVQTHPWKGFPYHLSFFSIGTLESVEVTIPLNFIGEPM--GV 117 Query: 122 KQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GG L++V EV + C NIP++I V+++ L++GD++H+ +++LPE +++ + Sbjct: 118 KNSGGMLDLVITEVQVNCKPGNIPEAIDVEVSALEVGDALHIHELKLPEGVEVIAEADQV 177 Query: 181 IATIVAPISG 190 +A+I+ G Sbjct: 178 VASILYRGGG 187 >gi|145222529|ref|YP_001133207.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium gilvum PYR-GCK] gi|315442977|ref|YP_004075856.1| 50S ribosomal protein L25P [Mycobacterium sp. Spyr1] gi|145215015|gb|ABP44419.1| LSU ribosomal protein L25P [Mycobacterium gilvum PYR-GCK] gi|315261280|gb|ADT98021.1| LSU ribosomal protein L25P [Mycobacterium sp. Spyr1] Length = 223 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R GKG++R R+ G++P ++YG+ +DP+ + L +D + L +LT Sbjct: 8 NLTAQVRSTTGKGASRRARREGRVPVVLYGHGTDPQHLELDGRDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V +G VTV V V E +PG Sbjct: 67 LDIDGTEQLALTKAIEIHPIRRNIQHADLLVVRKGEKVTVEVTVIVEGE-AAPGT----L 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + V + +IP+ TV + + G I I LP + ++ + +VA Sbjct: 122 VTQDANVVEIEADVQSIPEQFTVSVEGAEEGTQILAGQIELPSGVTLIADPETLVVNVVA 181 Query: 187 PISGS 191 + Sbjct: 182 APTAE 186 >gi|15892855|ref|NP_360569.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia conorii str. Malish 7] gi|71153165|sp|Q92H40|RL25_RICCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15620041|gb|AAL03470.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7] Length = 203 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S ++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTNKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|259507025|ref|ZP_05749925.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] gi|259165303|gb|EEW49857.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] Length = 222 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG + I L+ +D + + N Sbjct: 21 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAGLVRR-N 79 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ LD+ + K + ++ + H D L ++ G V V +PV + Sbjct: 80 GVNAVMELDVEGVKQLAMIKHIDQNVLTFNIDHVDLLAITRGEKVEVEIPVIVEGQPAPN 139 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + A NIP+ I V + +++G I DI+L + + + + Sbjct: 140 T-----MFVQDADTIRVEADALNIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDAEL 194 Query: 180 TIATIVAPI 188 IA +V P Sbjct: 195 LIANVVLPA 203 >gi|68536580|ref|YP_251285.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium jeikeium K411] gi|109893356|sp|Q4JU40|RL25_CORJK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68264179|emb|CAI37667.1| 50S ribosomal protein L25 [Corynebacterium jeikeium K411] Length = 214 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ +L Sbjct: 5 TRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNEGV-NAVL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ K + ++ + HAD L V G V V VPV F + G Sbjct: 64 ELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVIFTGQAAP-----GA 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +++L NIP+ ITVD+ +IGD + D+++P S +S+ + I +V Sbjct: 119 LVTQEADVITILADVLNIPEEITVDVEGKEIGDQVLAGDLQMPGNASLVSEEDTLIINVV 178 >gi|299820654|ref|ZP_07052543.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] gi|299817675|gb|EFI84910.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] Length = 213 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ + +R++G+IPAI+YG S+ P+++ D+ K + +N + Sbjct: 9 IVLDIKKRETKPHSNITEVRESGRIPAIVYGYQSENVPVSVDELDLLKLVR-ENGRNAVF 67 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++ + V+V+ DYQ+DP+ + L+H D L V + V V + + E S G+K+GG Sbjct: 68 TVNLDGKKVNVLLHDYQIDPLKNKLVHVDLLAVDMKAEVEAEVRIDLVGE--STGVKEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V HEV++ + +P+S+ VD+++L IGDS+ + I + ++ IAT+ Sbjct: 126 VLQQVLHEVTVSATPDKLPESVEVDISELGIGDSVEVSKISTSKAFEIITDGEEVIATVT 185 Query: 186 API 188 AP Sbjct: 186 APR 188 >gi|281412600|ref|YP_003346679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] gi|281373703|gb|ADA67265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] Length = 215 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTT 63 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 64 ILTLDIGKELV---HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ D V V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|256389402|ref|YP_003110966.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] gi|256355628|gb|ACU69125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] Length = 207 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 11/187 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q ++SA R + GKG AR R ++PA++YG+ + I L D+ L + N Sbjct: 1 MSQ--IRISAEDRTEFGKGFARRARAVNKVPAVVYGHGEPVRHILLPGHDLMIALRTPN- 57 Query: 61 MTTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L L+ G + V+PKD Q DPV L H D + V G VTV +P+ E Sbjct: 58 --VLLNLEFGDGKAQLVLPKDVQKDPVKRTLEHVDLVLVRSGEKVTVDIPITVTGE---- 111 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + G L+ + +++ A +IP I VD++ + G + + D+ LP + ++ + Sbjct: 112 -VVGGAVLDHSLNNLTVTAEATHIPTGIEVDVDRKEEGFQLFVRDLELPAGSELVTDGDQ 170 Query: 180 TIATIVA 186 + +V Sbjct: 171 LVLQVVV 177 >gi|25027568|ref|NP_737622.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium efficiens YS-314] gi|71153138|sp|Q8FQV5|RL25_COREF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23492850|dbj|BAC17822.1| putative 50S ribosomal protein L25 [Corynebacterium efficiens YS-314] Length = 202 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG + I L+ +D + + N Sbjct: 1 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAGLVRR-N 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ LD+ + K + ++ + H D L ++ G V V +PV + Sbjct: 60 GVNAVMELDVEGVKQLAMIKHIDQNVLTFNIDHVDLLAITRGEKVEVEIPVIVEGQPAPN 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + A NIP+ I V + +++G I DI+L + + + + Sbjct: 120 T-----MFVQDADTIRVEADALNIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDAEL 174 Query: 180 TIATIVAPI 188 IA +V P Sbjct: 175 LIANVVLPA 183 >gi|260912295|ref|ZP_05918846.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] gi|260633596|gb|EEX51735.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] Length = 200 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 97/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 +E ++ R +GK +++ +RK G IP +YG + A+ ++ K +Y Sbjct: 1 MREINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGQPEALSFAVPMAELRKVVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ LDI + I K+ Q PV+D L+HADF +++E ++ + +PV + Sbjct: 61 TPHIY--VVNLDIDGQKHTAIMKELQFHPVTDALLHADFYEINEEKSIAIGIPVNLVG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG+L++ ++ + P IP+ + +D+ L IG SI ++ E ++ Sbjct: 117 LAQGVRDGGRLSLSIRKLVVKAPYKQIPEKLDIDVTALTIGKSIKAGEVSF-EGLEVVTP 175 Query: 177 LNITIATI 184 ++ + T+ Sbjct: 176 KDVIVCTV 183 >gi|251794072|ref|YP_003008803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] gi|247541698|gb|ACS98716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] Length = 217 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 6/180 (3%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A R K R LR++G++P I+YG + P +A+ K++ L + ++ LD Sbjct: 7 AEQRTTTMKSELRSLRESGRVPGIVYGKQLASPASVAIQEKELLALLRTH--PNAVIDLD 64 Query: 69 I-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I G V+ + Q + +S LIH DF Q++ VT HV + + S G ++GG + Sbjct: 65 IPGAGKQSVMIAEIQREKLSRKLIHVDFQQINMNEEVTTHVRIDLVG--DSQGEREGGIV 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + HE+ + C +IPDSI VD+ L +G S + D++ P + ++ + + T++ P Sbjct: 123 QALLHELEVRCLPGSIPDSIPVDVTGLLMGSSYLVGDVQAPAGVTIVTDPSAVLVTVLVP 182 >gi|300864146|ref|ZP_07109041.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] gi|300337874|emb|CBN54187.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] Length = 201 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 101/190 (53%), Gaps = 8/190 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R + K +A LR++G IPA++YG+ ++ + ++AK + L Sbjct: 2 ELTVECQKRAEGSKPNA--LRRSGLIPAVLYGHSGAESIALTINAKTVETLLKKHVVNNA 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q+ P H F V+ ++ V V + FI E + G+ Sbjct: 60 LIQLNIPDISWSGKTLLREVQVHPWKGHPYHLSFFSVATQDSLEVEVNLHFIGE--AVGV 117 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K +GG L+ V ++ L C +NIP++I VD++++ +GD++H+ +++LPE + + + + Sbjct: 118 KMEGGILDPVLTQLKLKCKPDNIPEAINVDISEMHVGDALHIHELQLPEGVTPVGEPDQV 177 Query: 181 IATIVAPISG 190 + +++ G Sbjct: 178 VVSVLISQGG 187 >gi|313156860|gb|EFR56300.1| ribosomal protein L25, Ctc-form [Alistipes sp. HGB5] Length = 189 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + AV R++ GK +A+ +R+ G +P ++ G+ + ++ ++I +Y+ N Sbjct: 1 MKTISVKAVKREEYGKKAAKAVRREGMVPCVLSGHG-ESVAFSVDPREIKPLIYTPNSY- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ D + + ++ Q PV + ++H DF ++++G V++ +PVR + G+K Sbjct: 59 -IVEFDFDGKKEQAVLREAQFHPVREQILHLDFYRIADGKPVSIAIPVRLTG--NAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + N+PD + VD+ L +G +I + D++ E ++ + Sbjct: 116 VGGKLALSARKLVVSALVENLPDELVVDVTTLGVGKTIFVGDLKF-ENLKFVTPATTAVC 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|52078547|ref|YP_077338.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|52783909|ref|YP_089738.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|319648576|ref|ZP_08002790.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] gi|68053089|sp|Q65PG9|RL25_BACLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52001758|gb|AAU21700.1| general stress protein [Bacillus licheniformis ATCC 14580] gi|52346411|gb|AAU39045.1| Ctc [Bacillus licheniformis ATCC 14580] gi|317389343|gb|EFV70156.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] Length = 208 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVS 87 G +P +IYG + K +AL + ++ K L ++ TI+ LDI + V+ + Q DP+ Sbjct: 24 GYVPGVIYGRNLENKSVALDSIELLKILRAE-GKNTIINLDINGDQHSVMVTELQTDPLK 82 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D ++HADF V + + VPV E + GIKQGG L +E+S+ NIP +I Sbjct: 83 DSIVHADFKVVDMEAEMEATVPVNLTGE--AEGIKQGGVLQQPLYELSVTAKPKNIPQTI 140 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD++ L++ D + + DI S + + +A+I+ P Sbjct: 141 EVDISSLEVNDVLTVGDIPTKGDYSYNHEPDEVVASILPP 180 >gi|229817598|ref|ZP_04447880.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] gi|229785387|gb|EEP21501.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] Length = 204 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L+ R++ GKG AR LR G+IPA IY ++P +AL ++ + L N Sbjct: 1 MAN-TISLNGEARNEFGKGVARRLRVAGKIPATIYAGGTEPAYLALPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ + + KD Q +PV I+ H DFL+V G + V VPV + K Sbjct: 59 --ALFSISFDGQNKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGQPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + V E+ + N+P+ I V++ L G + ++D+++PE M L Sbjct: 117 VAF-----VDIQELKVRADVANLPEKIVVNVEGLTDGTKVLLKDVQMPEGAELDMDDLEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|326383812|ref|ZP_08205497.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] gi|326197576|gb|EGD54765.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] Length = 202 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 8/186 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R++ GKGSAR R GQ+PA++YG+ +DPK + L ++++ L + N + ++ Sbjct: 6 QLATTAREEKGKGSARRARAAGQVPAVLYGHGTDPKHLLLPNRELAAILRA-NGVNAVVE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + + H D L V G V V V + G+ G Sbjct: 65 LDIAGDKQLALTKQVDVHPIRNYIEHVDLLIVKRGEKVNVEVGIVI------EGVAASGT 118 Query: 127 LNVVCHE-VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + V + A +IP++I VD+++L G +I D+ LP ++ I +I Sbjct: 119 LTIQDASVVEVEAEALHIPENIVVDVHNLAAGTNITAADLLLPAGVELVTDGEALIVSIE 178 Query: 186 APISGS 191 A + + Sbjct: 179 AAKNAA 184 >gi|308235427|ref|ZP_07666164.1| 50S ribosomal protein L25/general stress protein Ctc [Gardnerella vaginalis ATCC 14018] gi|311114835|ref|YP_003986056.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] gi|310946329|gb|ADP39033.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] Length = 205 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R++ GKG AR LR IPA IY ++P + L ++ + L N Sbjct: 1 MATK-ITLEGEVRNEFGKGVARRLRVANLIPASIYAGGAEPVHVTLPMRETTLSLRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGNESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 VAF-----VDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPEGVVLDMDGEES 171 Query: 181 IATIVAP 187 + ++ P Sbjct: 172 VVSVTVP 178 >gi|170289080|ref|YP_001739318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] gi|226736373|sp|B1LBD7|RL25_THESQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170176583|gb|ACB09635.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] Length = 215 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTT 63 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 64 ILTLDIGKELV---HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ D V V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|91204543|emb|CAJ70771.1| similar to 50S ribosomal protein L25 (TL5) [Candidatus Kuenenia stuttgartiensis] Length = 212 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R + R LR G IPA++YG+ D +++ + + L N Sbjct: 1 MEVLELKAEKRTLKRTKAVRKLRATGHIPAVVYGHKEDNVLLSVDGGEFGRVL---NAGA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++L + V+ KD Q D +SD ++H DF +VS VT+ VP+ + G+K Sbjct: 58 RMISLAYDRTKESVLIKDVQYDNLSDKVLHVDFARVSMDERVTLKVPIILSG--SAVGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + C +P+ I V++++L++G SIH++++ +S + Sbjct: 116 AGGVLTQTMKNIEIECFPAAVPEDIKVNVSELEMGKSIHVKELPSIAGIKYLSDAESVVV 175 Query: 183 TI 184 ++ Sbjct: 176 SV 177 >gi|229495615|ref|ZP_04389348.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] gi|229317598|gb|EEN83498.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] Length = 189 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +LSA +R+ +GK + + LRK G IPA+IYG + ++ + +Y+ Sbjct: 1 MKTFQLSADLREGLGKKATKSLRKQGIIPAVIYG-GEATHHLTVTQDAVRNLIYTPEIF- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L + + + KD Q PV+D ++H DFL+V++ + + VPV E + G++ Sbjct: 59 -DIDLSVAGKTCKAVLKDIQFHPVTDEILHIDFLEVNKDKAIEMEVPVVL--EGHAAGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + + IP+ + +++ +L++G S+ + + E M+ N + Sbjct: 116 AGGKLVLEMRKLRVKAIYDQIPERLHINVENLELGKSMQVGALSF-EGLEIMNAKNAVVC 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|23335022|ref|ZP_00120260.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Bifidobacterium longum DJO10A] gi|23465427|ref|NP_696030.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum NCC2705] gi|189439450|ref|YP_001954531.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum DJO10A] gi|239622048|ref|ZP_04665079.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132858|ref|YP_004000197.1| rply [Bifidobacterium longum subsp. longum BBMN68] gi|317483594|ref|ZP_07942574.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|322688989|ref|YP_004208723.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] gi|322690958|ref|YP_004220528.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|71153122|sp|Q8G5Z8|RL25_BIFLO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736281|sp|B3DSB4|RL25_BIFLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23326077|gb|AAN24666.1| probable 50S ribosomal protein L25 [Bifidobacterium longum NCC2705] gi|189427885|gb|ACD98033.1| Ribosomal protein L25 [Bifidobacterium longum DJO10A] gi|239515239|gb|EEQ55106.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516979|emb|CBK70595.1| LSU ribosomal protein L25P [Bifidobacterium longum subsp. longum F8] gi|311773827|gb|ADQ03315.1| RplY [Bifidobacterium longum subsp. longum BBMN68] gi|316914969|gb|EFV36411.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|320455814|dbj|BAJ66436.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|320460325|dbj|BAJ70945.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] Length = 206 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 9/188 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL R + GKG AR LR +IPA IY +P + L ++ + L N + Sbjct: 4 TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ + KD Q +PV I+ H DFL+V G + V VPV K + Sbjct: 61 FTIAFDGNTKMAVVKDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V + L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEDPEESVVT 175 Query: 184 IVAPISGS 191 + P S Sbjct: 176 VEVPEDAS 183 >gi|325971763|ref|YP_004247954.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] gi|324027001|gb|ADY13760.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] Length = 211 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 5/178 (2%) Query: 8 LSAVMRDK-VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A +R + G AR L + +IPA+IYG +P I L +++ + ++ T +L Sbjct: 7 LKAELRTEDFGSAGARRLLRTKRIPAVIYGKN-EPVHIILDSREFTNKMRH-FSETALLK 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + +GK+ + KDYQ + + + H DF +V+ G + V + G K+GG Sbjct: 65 ISVGKKSYECLMKDYQENLMRAEIKHVDFFEVTRGQVLRTLVSIVLKG--NPVGTKEGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V HEV + C ++P ++ D+ LKI S+H++D+ +P + L T+A++ Sbjct: 123 LDQVMHEVEIECFPKDLPAALEADVTSLKINQSLHLKDVVIPANVKVLDDLAKTVASV 180 >gi|269926740|ref|YP_003323363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] gi|269790400|gb|ACZ42541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] Length = 205 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 5/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R+ VG+ LRK G +PAI+YG DP P+ ++A++ L Sbjct: 1 MTQENFTIKASKRELVGRS-LNTLRKQGFVPAIVYGYGIDPTPVQVNAREFEHTLKR-AG 58 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+++ L I + V V +D Q+ PV ++HADF V+ + VP+ + E + Sbjct: 59 RTSLIDLQIDDSQTVKVFIQDVQVHPVKLNILHADFHAVNLEEEIETEVPIVLVGEPAAI 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLN 178 G L +++ +IP I +++ DL +I +I++ DI+ S Sbjct: 119 -RNNIGVLQRGLESLTVRAKPADIPHEIEINVEDLAEIDQTIYVADIKPSGNYKITSDPE 177 Query: 179 ITIATIVA 186 + IV Sbjct: 178 EMVVKIVP 185 >gi|332877495|ref|ZP_08445242.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684601|gb|EGJ57451.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 197 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 KE + R GK +AR +RK +P +YG D P ++ ++ +Y Sbjct: 1 MKEINVKGTARAAFGKKAAREIRKANAVPCNLYGEAKDENGAPVALPFTVTNDELRNLIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 S + + L+I + I K+ Q PV D ++H DF ++++ + + VP++ Sbjct: 61 SPDIYA--VNLNIDGKECKAILKEIQFHPVKDNVLHVDFYEITDTKPIVMEVPIKLNG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GG+L ++ + NIP+ + +D+ L +G +I + ++ E ++ Sbjct: 117 LAEGVKAGGRLAASVRKLKVKAVYTNIPERLNIDVTSLGLGKTIKVGELHF-EGLELVTS 175 Query: 177 LNITIATI 184 + + + Sbjct: 176 KEVVVCQV 183 >gi|238650660|ref|YP_002916512.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] gi|259646696|sp|C4K1L3|RL25_RICPU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|238624758|gb|ACR47464.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] Length = 203 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|34581435|ref|ZP_00142915.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] gi|28262820|gb|EAA26324.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] Length = 203 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + T + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFV 178 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 179 LATIIGRRGA 188 >gi|258647538|ref|ZP_05735007.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] gi|260852318|gb|EEX72187.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] Length = 206 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 99/188 (52%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K+ +S V R +VGK + + LR+ G IP +YG + A+S KD K +Y Sbjct: 1 MKQISISGVKRTEVGKRATKALRREGLIPCNLYGQQKNENGEAVAMAFAISEKDAQKLIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ ++I E + ++ Q PV D ++H DFL+V + + VP++ + Sbjct: 61 TPHIY--LVDINIDGEDHKAVLRESQFHPVKDNILHIDFLEVHAERPIVIGVPIQ--TQG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG+L + ++++ +IP+ + +D+ +LK+G SI + D+ + ++ Sbjct: 117 LAEGVRAGGRLMTLIRKINVRALYQDIPEKLQIDVTELKLGKSIKVGDLSYDK-LELVTP 175 Query: 177 LNITIATI 184 ++ + ++ Sbjct: 176 KDVIVVSV 183 >gi|213692446|ref|YP_002323032.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254801035|sp|B7GS74|RL25_BIFLI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|213523907|gb|ACJ52654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458591|dbj|BAJ69212.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 207 Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL R + GKG AR LR +IPA IY +P + L ++ + L N + Sbjct: 4 TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ + KD Q +PV I+ H DFL+V G + V VPV K + Sbjct: 61 FTIAFDGNTKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V + L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDIEDPEESVVT 175 Query: 184 IVAP 187 + P Sbjct: 176 VEVP 179 >gi|15608155|ref|NP_215531.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Rv] gi|15840443|ref|NP_335480.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CDC1551] gi|31792206|ref|NP_854699.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis AF2122/97] gi|121636944|ref|YP_977167.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660797|ref|YP_001282320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|148822224|ref|YP_001286978.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis F11] gi|167968126|ref|ZP_02550403.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|215402830|ref|ZP_03415011.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|215410617|ref|ZP_03419425.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 94_M4241A] gi|215426293|ref|ZP_03424212.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T92] gi|215429876|ref|ZP_03427795.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis EAS054] gi|215445164|ref|ZP_03431916.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T85] gi|218752686|ref|ZP_03531482.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis GM 1503] gi|219556883|ref|ZP_03535959.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T17] gi|224989416|ref|YP_002644103.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799955|ref|YP_003032956.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|254231309|ref|ZP_04924636.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|254363931|ref|ZP_04979977.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|254550000|ref|ZP_05140447.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185926|ref|ZP_05763400.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CPHL_A] gi|260200044|ref|ZP_05767535.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T46] gi|260204233|ref|ZP_05771724.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis K85] gi|289442436|ref|ZP_06432180.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289446596|ref|ZP_06436340.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289555202|ref|ZP_06444412.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289568993|ref|ZP_06449220.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289573655|ref|ZP_06453882.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289744751|ref|ZP_06504129.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289749545|ref|ZP_06508923.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289753076|ref|ZP_06512454.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289757097|ref|ZP_06516475.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|289761151|ref|ZP_06520529.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|294995204|ref|ZP_06800895.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 210] gi|297633541|ref|ZP_06951321.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN 4207] gi|297730526|ref|ZP_06959644.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN R506] gi|298524511|ref|ZP_07011920.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|306775150|ref|ZP_07413487.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|306781935|ref|ZP_07420272.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|306783710|ref|ZP_07422032.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|306788065|ref|ZP_07426387.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|306792398|ref|ZP_07430700.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|306796801|ref|ZP_07435103.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|306802687|ref|ZP_07439355.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|306806866|ref|ZP_07443534.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|306967067|ref|ZP_07479728.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|306971257|ref|ZP_07483918.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|307078986|ref|ZP_07488156.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|307083546|ref|ZP_07492659.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|313657855|ref|ZP_07814735.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN V2475] gi|54039135|sp|P66122|RL25_MYCBO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54041837|sp|P66121|RL25_MYCTU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|1870013|emb|CAB06864.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium tuberculosis H37Rv] gi|13880614|gb|AAK45294.1| ribosomal L25p family protein [Mycobacterium tuberculosis CDC1551] gi|31617794|emb|CAD93903.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium bovis AF2122/97] gi|121492591|emb|CAL71059.1| Probable 50S Ribosomal protein L25 rplY [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600368|gb|EAY59378.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|134149445|gb|EBA41490.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|148504949|gb|ABQ72758.1| 50S ribosomal protein L25 [Mycobacterium tuberculosis H37Ra] gi|148720751|gb|ABR05376.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis F11] gi|224772529|dbj|BAH25335.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321458|gb|ACT26061.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|289415355|gb|EFD12595.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289419554|gb|EFD16755.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289439834|gb|EFD22327.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289538086|gb|EFD42664.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289542747|gb|EFD46395.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289685279|gb|EFD52767.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289690132|gb|EFD57561.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289693663|gb|EFD61092.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289708657|gb|EFD72673.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|289712661|gb|EFD76673.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|298494305|gb|EFI29599.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|308216300|gb|EFO75699.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|308325326|gb|EFP14177.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|308331493|gb|EFP20344.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|308335299|gb|EFP24150.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|308339107|gb|EFP27958.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|308342779|gb|EFP31630.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|308346688|gb|EFP35539.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|308350603|gb|EFP39454.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|308355236|gb|EFP44087.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|308359191|gb|EFP48042.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|308363093|gb|EFP51944.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|308366757|gb|EFP55608.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|323720515|gb|EGB29597.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CDC1551A] gi|326904758|gb|EGE51691.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis W-148] gi|328459698|gb|AEB05121.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 4207] Length = 215 Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G+IPA++YG+ ++P+ + L D + L + +LT Sbjct: 8 QLRVTVRTETGKGASRRARRAGKIPAVLYGHGAEPQHLELPGHDYAAVLRH-SGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V G V V V V + + Sbjct: 67 LDIAGKEQLALTKALHIHPIRRTIQHADLLVVRRGEKVVVEVSVVVEGQAGPDTL----- 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + + G + I LP S +S ++ + +V Sbjct: 122 VTQETNSIEIEAEALSIPEQLTVSIEGAEPGTQLTAGQIALPAGVSLISDPDLLVVNVVK 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|73663564|ref|YP_302345.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581585|sp|Q49V10|RL25_STAS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72496079|dbj|BAE19400.1| 50S ribosomal protein L25 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 220 Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 96/175 (54%), Gaps = 4/175 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + LR G++PAI+YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSDLKTLRNTGKVPAIVYGYGTKNTSVKVDEVEFIKVIR-EVGRNGVIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + E + G K+GG Sbjct: 63 LGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVQLVGE--AVGTKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + +NIP+SI VD+++L+I DS+ +EDI++ + ++ + +I Sbjct: 121 VEQPLFNLEVTATPDNIPESIEVDISELEINDSLSVEDIKVSGDFTIENEASDSI 175 >gi|217076515|ref|YP_002334231.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] gi|226736370|sp|B7IFM6|RL25_THEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217036368|gb|ACJ74890.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] Length = 217 Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 103/194 (53%), Gaps = 10/194 (5%) Query: 3 QKECKLSAVMRDKVGKG-SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 ++ L A++R VGK + R LR+ G +P ++YG +P I++ ++ K L+ + Sbjct: 1 MEKHTLEALVRSVVGKKRAVRRLRRQGFVPGVVYGPDVEPLSISIKRSNLIK-LFHEVTE 59 Query: 62 TTILTLDIGKE------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 +I++L + E V K+ Q D ++D + H DF +G + +++P+ F+ Sbjct: 60 ASIISLTVKDENGKEVFSHDVFIKNVQYDKLTDEVKHVDFYAPEKGHKMKINLPLEFVG- 118 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 K+ G ++GG L + HE+ + N + + + +D+++L +G +++++D++LPE + Sbjct: 119 -KAKGEEKGGVLEIHHHELPVETLPNAVVEKLEIDVSNLDLGQALYVKDLKLPEGMEAEL 177 Query: 176 QLNITIATIVAPIS 189 IA + P Sbjct: 178 DEEEIIAIVSTPSG 191 >gi|325298380|ref|YP_004258297.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] gi|324317933|gb|ADY35824.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] Length = 198 Score = 170 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K ++ +R + GK + LRKN Q+P I+YG D P A++ + + +Y Sbjct: 1 MKSIDITGSLRTETGKKATHDLRKNNQVPCILYGMKKDENGNPAATPFAVTVEGLRNLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DF Q++E + + + VPV+ E Sbjct: 61 TPHIY--VVNLNIDGQVVNAIMKDIQFHPVTDAILHVDFYQINEENPIVMEVPVQL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GGKL + ++ + NNIP+ + +++ +L +G +I + ++ + ++ Sbjct: 117 LAEGVKAGGKLALQVRKLKVKALYNNIPERLVINVTNLGLGKTIKVGELHF-DNLELLNA 175 Query: 177 LNITIATI 184 + + + Sbjct: 176 KDTVVCAV 183 >gi|225351971|ref|ZP_03742994.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157218|gb|EEG70557.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 198 Score = 170 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 9/188 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR +R IPA +Y +P + L K+ + L N + Sbjct: 4 TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G E + KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 61 FTIKFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEESVVT 175 Query: 184 IVAPISGS 191 + P + Sbjct: 176 VEVPEDAA 183 >gi|291514751|emb|CBK63961.1| ribosomal protein L25, Ctc-form [Alistipes shahii WAL 8301] Length = 190 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + AV R GK +A+ +R+ G +P ++ GN + + ++ ++I +Y+ N Sbjct: 1 MKTISVKAVKRADFGKKAAKAIRREGMVPCVLCGNG-ETETFSVDPREIKPLIYTPNSY- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ DI + + ++ Q PV + ++H DF +++EG V++ +PVR + G+K Sbjct: 59 -IVEFDIEGKKEQAVLREAQFHPVREEILHLDFYRIAEGKPVSIAIPVRLTG--NAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + N+PD I VD+ +L +G +I + D+ E ++ + Sbjct: 116 VGGKLALSARKLVVSALVENLPDEIVVDVTELGVGKTIFVGDLEF-ENLKFITPATTAVC 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|156741060|ref|YP_001431189.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus castenholzii DSM 13941] gi|226736357|sp|A7NI71|RL25_ROSCS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|156232388|gb|ABU57171.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Roseiflexus castenholzii DSM 13941] Length = 218 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K LS R VGK + LR++G +PA +YG +P + + A+ +Y + Sbjct: 1 MSEK-YTLSLEPRAVVGKK-VKRLRRSGILPATVYGKGIEPISVQVDARSF-NAVYRRAG 57 Query: 61 MTTILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T ++ L I + + Q PV+ +IHADF V V V VP+ E SP Sbjct: 58 RTALVELHIAGRQPLAAFIHALQRHPVTRDIIHADFRAVDLSQEVEVAVPLHIEGE--SP 115 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKI-GDSIHMEDIRLPEKTSSMSQL 177 ++ G LN V + + + +NIP +TVD++ L SIH+ D+ LP + + Sbjct: 116 LVESGEAVLNQVLNAIEIRALPSNIPAHLTVDISGLDAFDKSIHVRDLALPPGVTLATPG 175 Query: 178 NITIATIV 185 + + ++ Sbjct: 176 DELVVSLA 183 >gi|72160820|ref|YP_288477.1| 50S ribosomal protein L25/general stress protein Ctc [Thermobifida fusca YX] gi|109893401|sp|Q47SW3|RL25_THEFY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71914552|gb|AAZ54454.1| LSU ribosomal protein L25P [Thermobifida fusca YX] Length = 194 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 9/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG+AR R+ G++PA++YG+ P+ I L D+ L + N Sbjct: 1 MSEVRIAAEPRTEFGKGAARRARRAGKVPAVLYGHGIAPRHINLPGHDLMLALKTPN--- 57 Query: 63 TILTLD-IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L+ + ++ V+PK Q DP+ L H D L V G V V VP+ E + Sbjct: 58 VLLRLEGVDEKESLVLPKSVQRDPIKGFLEHVDLLVVQRGEKVVVEVPLLVKGE-----V 112 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG LN+ + + A IP+ I VD++ L IG ++ D++LPE + Sbjct: 113 GAGGVLNLEMAQAEVRAEATRIPEGIEVDVDGLPIGTNVTAGDLKLPEGVELAMDPETIV 172 Query: 182 ATIV 185 ++V Sbjct: 173 MSVV 176 >gi|212716015|ref|ZP_03324143.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] gi|212661382|gb|EEB21957.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 9/188 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR +R IPA +Y +P + L K+ + L N + Sbjct: 4 TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G E + KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 61 FTIKFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEESVVT 175 Query: 184 IVAPISGS 191 + P + Sbjct: 176 VEVPEDAA 183 >gi|83816854|ref|YP_444950.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] gi|109893393|sp|Q2S4D1|RL25_SALRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83758248|gb|ABC46361.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] Length = 250 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 7/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R+ G +AR +R N ++P ++YG + P+ + ++K +Y ++ + + Sbjct: 25 IEAQPRE-TGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRSAP--VAEV 81 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + I KDY L P++D +HADF + EG VT+ VP+ + G + GG Sbjct: 82 EMNGDTWNCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYTG--IPVGQQNGGDT 139 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + E+++ NIP I VD+ +L IGDS+H+ D+ + + T+ T+VAP Sbjct: 140 QQIARELTISVLPENIPAQIEVDIGELVIGDSLHVYDLE--TDYEIKTSRDQTLVTVVAP 197 >gi|289551700|ref|YP_003472604.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315660332|ref|ZP_07913185.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] gi|289181231|gb|ADC88476.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315494621|gb|EFU82963.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] Length = 216 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L +++R K + + +R G++PA++YG + + + + K + + ++ Sbjct: 4 LKSIIRQGKQTRSELKKIRSLGKVPAVVYGYSTKNTSVKVDEVEFIKVIR-EVGRNGVID 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + E + G K+GG Sbjct: 63 LGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVHLVGE--AVGAKEGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + NIP++I VD+ DL+I DS + D+++ + + +I Sbjct: 121 VEQPLFYLQVTATPENIPEAIEVDVTDLQINDSYTVADVKVTGDYTIEDEPETSI 175 >gi|288574798|ref|ZP_06393155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570539|gb|EFC92096.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 207 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 2/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 +L+ RD VGK + LR++G IPA++YG + + + A+D + ++ T Sbjct: 4 VRLNLEKRDAVGKEACGRLRRSGYIPAVLYGPDYREAVSVQVKAEDFLPNIRGTHWNTLK 63 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + I +D + VSD ++H DF Q+ +G V+V VP+ + + G+K Sbjct: 64 FDAVLPDGSSEMCIIRDMNRNYVSDDVLHVDFYQLVKGHKVSVKVPIEIVGKETCAGVKA 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L ++ + IP+++ +++ + +GDSI + D+ LPE + + Sbjct: 124 GGLLEQRILDIEINVLPREIPENVVLNVESMNVGDSITLADLDLPESAEMDKDPSEIVVE 183 Query: 184 IV 185 +V Sbjct: 184 VV 185 >gi|157964747|ref|YP_001499571.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia massiliae MTU5] gi|157844523|gb|ABV85024.1| 50S ribosomal protein L25 [Rickettsia massiliae MTU5] Length = 211 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 9 MS-EILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKIPVSISLEEKEITKYYRKPAF 67 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G Sbjct: 68 ISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALG 126 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ Sbjct: 127 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFV 186 Query: 181 IATIVAPISG 190 +ATI+ Sbjct: 187 LATIIGRRGA 196 >gi|193215984|ref|YP_001997183.1| 50S ribosomal protein L25/general stress protein Ctc [Chloroherpeton thalassium ATCC 35110] gi|226736298|sp|B3QWH6|RL25_CHLT3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193089461|gb|ACF14736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chloroherpeton thalassium ATCC 35110] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R K + LR NG +PA +Y +++ + + K +Y+ Sbjct: 1 MQTIVLEAERRMPGKKSDLKQLRANGNVPATLYHKGEPSISLSVKEQSLRKVIYTTESHI 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G E V+ KDYQ +P++D + HADF + V V VP+ F G+ Sbjct: 61 INLRFTDGTEKPSVM-KDYQFNPLTDSITHADFQLLKSDEYVEVEVPILFTG--NPVGVV 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKT--SSMSQLN 178 +GG + H++ + C +++P+ ITVD++ + +G+S+H+ ++ ++ EK + ++ + Sbjct: 118 KGGMVQATLHKLEIRCLPSDMPEHITVDISSMDMGESLHVGELSSKIQEKIEFTVLTDSH 177 Query: 179 ITIATIVAPI 188 + +++AP Sbjct: 178 APVISVLAPR 187 >gi|294506808|ref|YP_003570866.1| 50S ribosomal protein L25 [Salinibacter ruber M8] gi|294343136|emb|CBH23914.1| 50S ribosomal protein L25 [Salinibacter ruber M8] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 7/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R+ G +AR +R N ++P ++YG + P+ + ++K +Y ++ + + Sbjct: 35 IEAQPRE-TGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRSAP--VAEV 91 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++ + + I KDY L P++D +HADF + EG VT+ VP+ + G + GG Sbjct: 92 EMNGDTWNCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYTG--IPVGQQNGGDT 149 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + E+++ NIP I VD+ +L IGDS+H+ D+ + + T+ T+VAP Sbjct: 150 QQIARELTISVLPENIPAQIEVDIGELVIGDSLHVYDLE--TDYEIKTSRDQTLVTVVAP 207 >gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium adolescentis ATCC 15703] gi|118765344|dbj|BAF39523.1| 50S ribosomal protein L25 [Bifidobacterium adolescentis ATCC 15703] Length = 204 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR +R IPA +Y DP + L K+ + L N + Sbjct: 6 TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEDPTFVQLPMKETTLALRHTN---AL 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G E + KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 63 FTIKYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 122 ----VDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEESVVT 177 Query: 184 IVAP 187 + P Sbjct: 178 VEVP 181 >gi|315161889|gb|EFU05906.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0645] Length = 202 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSQRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|299536725|ref|ZP_07050035.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727839|gb|EFI68404.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 3/185 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 LS R+ + + LRK G IPA+IYG D PI+++AKD K + KN ++ Sbjct: 2 STVLSVTKRETGHRSTLTQLRKGGAIPAVIYGYKVDSTPISIAAKDFKKSIQ-KNGQNSV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +L++ + V+ + + Q + D + H DFL ++ + VP++ + + S G+ +G Sbjct: 61 FSLELEGKKVNAVVSEVQQCSLKDEVNHIDFLAINMAEELEADVPIKLLGQ--SVGVSEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + +P+SI VD++ LKIG+S+ + DIR +S+ + + TI Sbjct: 119 GILMQPNLELKVKVKPTELPESIDVDISSLKIGESLTVADIRDATPVEIISEDDYMLVTI 178 Query: 185 VAPIS 189 VAP+S Sbjct: 179 VAPVS 183 >gi|212703171|ref|ZP_03311299.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] gi|212673437|gb|EEB33920.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] Length = 196 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 7/184 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E LS R+ GKG A R IP + Y D + A + K +Y++ T + Sbjct: 4 EKTLSVQKREGSGKGPAGRARTQDMIPGVFYTAKGDNIAVQAPALPLEK-MYTEMGRTAV 62 Query: 65 LTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L+I K + V+ + Q P H DF V V V VP+ F+ + G Sbjct: 63 FNLEIDDNGTKTVHPVMFWEVQKHPYKKAFTHVDFYGVDLDKEVKVDVPIEFVG--VARG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG + V L ++P +T+++ D+ I DS+ +E + LPE ++ N Sbjct: 121 VKLGGVMETYRESVRLCSKPLDMPKKVTINVTDMGINDSVTVETLTLPENVKAVFDKNFA 180 Query: 181 IATI 184 I ++ Sbjct: 181 IVSV 184 >gi|303246471|ref|ZP_07332750.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] gi|302492181|gb|EFL52056.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] Length = 207 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 7/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R +GKG+ R LR +P I Y P+ + + K LY+K + Sbjct: 2 KETLSLAVTTRTGLGKGANRKLRAKDMVPGIYYDATGANVPVMVEHLPLQK-LYAKTASS 60 Query: 63 TILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L I G+E + + P + H DF V + VH+PV K+ Sbjct: 61 HVFDLKIATDAGEETKPSLMWKVEHHPTKPRITHVDFYGVDLTKAIHVHIPVVVTG--KA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G +GG L V + ++C IPD + +D+ +L + +S+ + D+ LPE ++ + N Sbjct: 119 KGQVKGGALEVYRESIEVVCLPLAIPDRVVIDITNLDVNESVQVADLVLPEGVKAVYEDN 178 Query: 179 ITIATIV 185 ++ +V Sbjct: 179 FSLLAVV 185 >gi|257057204|ref|YP_003135036.1| 50S ribosomal protein L25P [Saccharomonospora viridis DSM 43017] gi|256587076|gb|ACU98209.1| LSU ribosomal protein L25P [Saccharomonospora viridis DSM 43017] Length = 212 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+ R + GKG+AR R+ G+IPA++YG SDP+ +AL A + ++ L ++ Sbjct: 1 MSEVRLTVEPRTEFGKGAARRTRRAGKIPAVLYGPGSDPRHLALPAIEFARVLR-EHGQN 59 Query: 63 TILTLDIG------KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 T++TLDI K +P+ + P+ + + H D L V G V V VPV ++ Sbjct: 60 TVITLDIDSNGNGEKASEMALPRAVAVHPLKNYIEHVDLLIVKRGEKVVVDVPVVLTGQS 119 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G + + + A ++PD + V + G I + LP +S Sbjct: 120 GP-----GTLVTQELDAIQVQAEALSLPDQLEVSVEGATAGTQITAAQVALPAGAELVSD 174 Query: 177 LNITIATIV-APISGS 191 + IA + AP + Sbjct: 175 PELLIAVVSEAPSEAA 190 >gi|154487414|ref|ZP_02028821.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] gi|154083932|gb|EDN82977.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] Length = 202 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR +R IPA +Y DP + L K+ + L N + Sbjct: 4 TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEDPVFVQLPMKETTLSLRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G E + KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 61 FTIKYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDIEDPEESVVT 175 Query: 184 IVAP 187 + P Sbjct: 176 VEVP 179 >gi|212691832|ref|ZP_03299960.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|237708038|ref|ZP_04538519.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|237724811|ref|ZP_04555292.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D4] gi|265756187|ref|ZP_06090516.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] gi|212665588|gb|EEB26160.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|229437006|gb|EEO47083.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides dorei 5_1_36/D4] gi|229457866|gb|EEO63587.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|263233778|gb|EEZ19387.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K ++ +R VGK + LRKN +P ++YG D ++ + + +Y Sbjct: 1 MKSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E Sbjct: 61 TPHIY--VVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GGKL + ++ + N IP+ + VD+ L +G +I + ++ E ++ Sbjct: 117 LAEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTIKVGELSY-EGLELINA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|315148326|gb|EFT92342.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4244] Length = 202 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 3/186 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 VAPISG 190 V + Sbjct: 179 VEAQTA 184 >gi|302530284|ref|ZP_07282626.1| ribosomal protein L25 [Streptomyces sp. AA4] gi|302439179|gb|EFL10995.1| ribosomal protein L25 [Streptomyces sp. AA4] Length = 205 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 7/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + ++ + +N + Sbjct: 9 EVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFARVVR-ENGTNAV 67 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLD+ + K + P+ + + H D L V G VTV VPV + Sbjct: 68 ITLDLEGSSELALTKTIVVHPLKNYIEHVDLLVVKRGEKVTVDVPVVVTGTAAPSTL--- 124 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + A +IP+ V + ++ G I I LP ++ + + Sbjct: 125 --VAQDIDTIQVEVEALHIPEQFEVSVEGIEAGTQITAGQISLPAGAELVTDPEALVVAV 182 Query: 185 -VAPIS 189 AP Sbjct: 183 NEAPRG 188 >gi|315166971|gb|EFU10988.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1341] Length = 202 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKSINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|124010550|ref|ZP_01695178.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] gi|123982281|gb|EAY23848.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] Length = 204 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK S++ LR++G +P ++YG +Y+ N Sbjct: 1 MKTLEIIGYHRANLGKKSSKDLRRDGNVPCVLYGGDKQ-VHFQSPMILFRDLVYTPNIHK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++ + I +D Q PVS+I++HADFLQ+SE + + VPV+++ SPG+ Sbjct: 60 VL--LNVEGDKYECILQDIQFHPVSEIIMHADFLQISEDKAIKMDVPVKYVG--TSPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L +++ + +P+ I VD+++L++G S+ + + E ++ IA Sbjct: 116 GGGRLVSKLNKLKVSALPTKMPEFIEVDISELELGKSVKVGALSTTE-FEILNSDRSPIA 174 Query: 183 TI 184 ++ Sbjct: 175 SV 176 >gi|299537535|ref|ZP_07050829.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727096|gb|EFI67677.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 211 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R K + S LR+NG IP ++YG + I L A+ +K L + + ++ L Sbjct: 5 LTASKRQKGRQSSLTQLRQNGGIPGVVYGFQMESTAIMLDARAFAKMLAT-HGTKSVFQL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + ++ + + Q + + H DF ++ + V +PV I + G+ GG L Sbjct: 64 DVEGKRINAVLTEVQRCALKGNVKHVDFKSINMSEELEVDIPVTVIG--DAVGVADGGFL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV + +IP++I +D+ + IG S+++ DIR + + + T+ TI P Sbjct: 122 LQPNREVRIKVKPTDIPETIEIDVTHVAIGTSLYVGDIRQQFSFEILQEDDYTLVTITPP 181 Query: 188 IS 189 + Sbjct: 182 AA 183 >gi|315645551|ref|ZP_07898675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315279029|gb|EFU42339.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 191 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 5/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + K + LR +G IPAI++G D I LSA + K +++N IL Sbjct: 3 VNLRAETRAVMNKTGLKQLRLSGLIPAIVFGAGEDNMMIQLSASEFGK--WARNGKGGIL 60 Query: 66 TLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + +E + V+ + Q DPV+ IH DFL++ V V + +I + G K G Sbjct: 61 ELCLDNQEPILVLLESVQRDPVTREYIHVDFLRIHINEVVRTRVNLDYIG--TAKGAKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + + + ++IP +I +D+++L+IGDS+H+ +++LP +S N + ++ Sbjct: 119 GVVQIQSTFIEIESFPDHIPAAIPIDISELEIGDSLHVGELKLPGGVVPISSANELLVSV 178 Query: 185 VAPI 188 V P Sbjct: 179 VTPK 182 >gi|328948675|ref|YP_004366012.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] gi|328448999|gb|AEB14715.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] Length = 184 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 3/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ ++A R + GK A+ +R G+IPA+ Y + + + A + SK S T Sbjct: 1 MEQFVINATTRTESGKKYAKKIRAQGKIPAVAYNEKGESFMLEIDANEFSKAWRSIT-KT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ L I KD + D +D +HADF VS T +R+ + G+ Sbjct: 60 TLIVLKIDGVENKAFIKDTEYDIKTDKSLHADFHIVSGQKKFTFVYKIRYSG--TAAGVL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + E+ + ++P+ I+ D++ L+IG + D L +K +S + Sbjct: 118 KGGFMVKHVPEIKVKALPQDLPEFISADVSKLEIGQKFTIADFNLGDKIEVLSDPAALVV 177 Query: 183 TIVAPI 188 +I P Sbjct: 178 SIAPPK 183 >gi|307289481|ref|ZP_07569429.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|306499577|gb|EFM68946.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|315164680|gb|EFU08697.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1302] Length = 202 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKITVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|322433960|ref|YP_004216172.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] gi|321161687|gb|ADW67392.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] Length = 232 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%) Query: 1 MDQKECK-LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + + A R K K AR +R G+IPA +YG D + + K ++K L+S+ Sbjct: 1 MASQKFEAVVATPRTGKFNKNHARRVRVAGKIPATVYGAGIDAVAVTVDPKVVTKILHSE 60 Query: 59 NFMTTILTLDIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + TI L++ + + D+Q +P+ L+HADF +++ + V VPV Sbjct: 61 SGHNTIFDLNVEGAPLAKAMIVDWQHEPIKGKLLHADFKRIAMDKAMRVSVPVLLSG--I 118 Query: 118 SPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G+K GG L+ + EV + C ++IPD I VD+ +L++ +IH+ D+ + Sbjct: 119 PVGVKTGGGVLDQIMREVEIECLPSDIPDHIDVDVANLELYGAIHISDLPHSGSIKFLGD 178 Query: 177 LNITIATIV 185 +A + Sbjct: 179 ETALVAHVT 187 >gi|126653926|ref|ZP_01725770.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589586|gb|EAZ83726.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 211 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R K + S LR+NG IP ++YG + I L A+ +K L + + ++ L Sbjct: 5 LTANKRQKGRQSSLTQLRQNGAIPGVVYGFQMESTAITLDARVFAKLL-AAHGTKSVFQL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + ++ + + Q + + H DF ++ + V +PV + G+ GG L Sbjct: 64 DVDGKRINAVLSEVQRCALKGNIKHVDFKSINMSEELEVEIPVTVTG--DAIGVADGGFL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 EV + IP++I +D+ ++ IG S+++ DIR + + + T+ TI P Sbjct: 122 LQPNREVRIKVKPTEIPETIEIDVTNVAIGTSLYVGDIRQQFSFEILQEDDYTLVTITPP 181 Query: 188 IS 189 + Sbjct: 182 SA 183 >gi|148270294|ref|YP_001244754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga petrophila RKU-1] gi|166223728|sp|A5ILV5|RL25_THEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|147735838|gb|ABQ47178.1| LSU ribosomal protein L25P [Thermotoga petrophila RKU-1] Length = 214 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTT 63 L A +R+ GK AR LR+NG++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRNGEVPAVVYGPATEPIPVKIKRSVLEKVFHTISEATPIQ 61 Query: 64 ILTLDIGKELV---HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ D V V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVSEKTVFLKMIQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + +N+P I VD++ L +GD I+ D++LPE + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDNVPQEIEVDVSSLDLGDVIYARDLKLPEGVKCLLGDEEV 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|227545903|ref|ZP_03975952.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213697|gb|EEI81543.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 206 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 9/188 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL R + GKG AR LR +IPA IY +P + L ++ + L N + Sbjct: 4 TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ + KD Q +PV I+ H DFL+V G + V VPV K + Sbjct: 61 FTIAFDGNTKMAVVKDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V + L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEAPEESVVT 175 Query: 184 IVAPISGS 191 + P S Sbjct: 176 VEVPEDAS 183 >gi|332826853|gb|EGJ99653.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286] Length = 193 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD--PKPIALSAKDISKRLYSKNF 60 K +L R +GK + + RK +IPA+IYG ++ ++ K +Y+ Sbjct: 1 MKTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGEKADKAIHFIVTNSEVRKLIYTPEI 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L +GK+ I KD Q+ PV+D ++H DFL V E +T+ VPV + + G Sbjct: 61 F--LVDLTVGKDNYKAILKDIQVHPVTDEILHLDFLHVFENKPITIDVPVVL--DGLAEG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GGKL++ ++ + + +P+ + VD++ L +G SI + ++ E ++ N Sbjct: 117 VKAGGKLSLDLRKLKVRALYDKVPEKVHVDVSGLALGKSIQVGELHF-EGLELLNAKNGV 175 Query: 181 IATI 184 + + Sbjct: 176 VCRV 179 >gi|328949924|ref|YP_004367259.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] gi|328450248|gb|AEB11149.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] Length = 209 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + + LR G++P ++Y + I + + K + + Sbjct: 2 EYRLKAYTRENE---NPKQLRAQGKLPGVLYNKEI-NRKIYVELNEFDKVFRKASIH-HV 56 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +TL++ + + LD H DF +S V ++VP++F+ + G++ Sbjct: 57 ITLELPDGTTYDTLVRQLNLDKRRRRPEHVDFFVLS-DEPVEMYVPLKFVG--TAEGVRL 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V H+V + NIP+ I VD++ L IG S+H+ DI LPE T+ T Sbjct: 114 GGVLEQVLHDVLVRVAPRNIPEFIEVDVSGLGIGQSLHLADITLPEGVELAMSPEETVVT 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis V583] gi|227517790|ref|ZP_03947839.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227554936|ref|ZP_03984983.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255973896|ref|ZP_05424482.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256617695|ref|ZP_05474541.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256761581|ref|ZP_05502161.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256957316|ref|ZP_05561487.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256959948|ref|ZP_05564119.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256964357|ref|ZP_05568528.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|257077688|ref|ZP_05572049.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|257081067|ref|ZP_05575428.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|257083739|ref|ZP_05578100.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|257086164|ref|ZP_05580525.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|257089237|ref|ZP_05583598.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257415387|ref|ZP_05592381.1| ribosomal protein L25 [Enterococcus faecalis AR01/DG] gi|257418421|ref|ZP_05595415.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|293384300|ref|ZP_06630186.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|293388464|ref|ZP_06632970.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294779202|ref|ZP_06744609.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|300859682|ref|ZP_07105770.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|307270120|ref|ZP_07551438.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|307271421|ref|ZP_07552694.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|307284347|ref|ZP_07564512.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|312901641|ref|ZP_07760911.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|312905053|ref|ZP_07764178.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|312907105|ref|ZP_07766098.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|312979316|ref|ZP_07791014.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|68053202|sp|Q837L6|RL25_ENTFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29342869|gb|AAO80633.1| ribosomal protein L25 [Enterococcus faecalis V583] gi|227074751|gb|EEI12714.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227175932|gb|EEI56904.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255966768|gb|EET97390.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256597222|gb|EEU16398.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256682832|gb|EEU22527.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256947812|gb|EEU64444.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256950444|gb|EEU67076.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256954853|gb|EEU71485.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|256985718|gb|EEU73020.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|256989097|gb|EEU76399.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|256991769|gb|EEU79071.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|256994194|gb|EEU81496.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|256998049|gb|EEU84569.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257157215|gb|EEU87175.1| ribosomal protein L25 [Enterococcus faecalis ARO1/DG] gi|257160249|gb|EEU90209.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|291078373|gb|EFE15737.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|291082154|gb|EFE19117.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294453713|gb|EFG22108.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|295113967|emb|CBL32604.1| LSU ribosomal protein L25P [Enterococcus sp. 7L76] gi|300850500|gb|EFK78249.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|306503287|gb|EFM72539.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|306511885|gb|EFM80882.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|306513555|gb|EFM82169.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|310626882|gb|EFQ10165.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|310631632|gb|EFQ14915.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|311287910|gb|EFQ66466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|311291252|gb|EFQ69808.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|315027593|gb|EFT39525.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2137] gi|315031326|gb|EFT43258.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0017] gi|315035357|gb|EFT47289.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0027] gi|315145201|gb|EFT89217.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2141] gi|315151610|gb|EFT95626.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0012] gi|315170844|gb|EFU14861.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1342] gi|315172713|gb|EFU16730.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1346] gi|315575275|gb|EFU87466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309B] gi|315576567|gb|EFU88758.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0630] gi|315581358|gb|EFU93549.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309A] gi|329577703|gb|EGG59130.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1467] Length = 202 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|320536078|ref|ZP_08036135.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] gi|320147078|gb|EFW38637.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] Length = 211 Score = 168 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 92/177 (51%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R +GK +A R+ G++PA++Y PI +S D K L+ +TI+T+ Sbjct: 6 LSGRRRTGLGKAAAARCRREGRLPAVMYDRFGKSIPIDVSQYDFYK-LFRNITESTIITV 64 Query: 68 DIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + V KDYQ + ++D + H DF +V G + + +R G++QG Sbjct: 65 KLDDKDEFEVFVKDYQHNIITDTVEHVDFYEVERGKVLRTKIQLRLSG--SPEGVRQGAV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 L ++ + C ++P+ I VD++ L + +++H+ DI++ + ++ ++ +AT Sbjct: 123 LEAGLTDIEVECLPKDLPERIIVDVSKLDLNEALHVRDIKVQGEVKILTDPDLPVAT 179 >gi|297243447|ref|ZP_06927379.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] gi|296888492|gb|EFH27232.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] Length = 208 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 9/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G+E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGEESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LP+ + Sbjct: 117 VAF-----VDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPQGVELDMDGEES 171 Query: 181 IATIVA 186 + ++ Sbjct: 172 VVSVTV 177 >gi|289433566|ref|YP_003463438.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169810|emb|CBH26348.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ D L+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLVG--NAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 L + H+V + +P++I +D++ L+IGD + D LPE Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDVSSLEIGDVLTTND--LPEN 162 >gi|313635141|gb|EFS01467.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL N1-067] gi|313639814|gb|EFS04543.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL S4-171] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ D L+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 L + H+V + +P++I +D++ L+IGD + D LPE Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTND--LPEN 162 >gi|296454050|ref|YP_003661193.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] gi|296183481|gb|ADH00363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL R + GKG AR LR +IPA IY +P + L ++ + L N + Sbjct: 4 TIKLEGEARSEFGKGVARRLRVAKKIPATIYAGGEEPAFVTLPMRETTLALRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ + KD Q +PV I+ H DFL+V G + V VPV K + Sbjct: 61 FTIAFDGNTKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V + L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEDPEESVVT 175 Query: 184 IVAP 187 + P Sbjct: 176 VEVP 179 >gi|327438089|dbj|BAK14454.1| ribosomal protein L25 [Solibacillus silvestris StLB046] Length = 217 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 97/184 (52%), Gaps = 6/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R+ + LR GQ+ ++YG ++ PI+L +D +K + + T++ + Sbjct: 5 LQATKRETGKRSILSQLRNEGQLAGVLYGYETETTPISLDYRDTAKAVQT-YGTTSVFKI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ + D Q D + + H DFL ++ + V VP+ FI S G+K+GG + Sbjct: 64 EVGGKRVNAVLTDIQRDALKGHVKHVDFLAINMKEELEVDVPIAFIG--TSVGVKEGGVI 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKTSSMSQLNITIATIV 185 H + + + IPD+I +D++DL +G+S+ + ++ + + + + T+AT+ Sbjct: 122 TQPNHTLKIKVNPSKIPDTIEIDVSDLAVGESLSVGNVRDQFTA-FTIVDNDDYTLATVT 180 Query: 186 APIS 189 P + Sbjct: 181 PPAA 184 >gi|229546665|ref|ZP_04435390.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256854329|ref|ZP_05559693.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|307276208|ref|ZP_07557338.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|307296166|ref|ZP_07575996.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|229308232|gb|EEN74219.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256709889|gb|EEU24933.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|306496140|gb|EFM65720.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|306507120|gb|EFM76260.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|315030511|gb|EFT42443.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4000] gi|315159965|gb|EFU03982.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0312] gi|323480002|gb|ADX79441.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 62] Length = 202 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 3/186 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 VAPISG 190 V + Sbjct: 179 VEAQTA 184 >gi|297565117|ref|YP_003684089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] gi|296849566|gb|ADH62581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] Length = 205 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR +G++P I+Y + + + + K + + Sbjct: 2 EYRLKAYHRESE---NPERLRDSGKLPGILYNKQM-NEKVYVDLGEFDKVFRQASIH-HV 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL++ + V+ + LD H DF +S V ++VP++F+ G++ G Sbjct: 57 ITLELDGKTQDVLVRQVNLDKRKRRPSHVDFYALS-DEPVAMYVPLKFVG--TPQGVRLG 113 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ V ++ + NIPD I VD++ L IGDS+H+ D++LP + + T+ TI Sbjct: 114 GVMDTVLRDIEVKVSPRNIPDFIEVDVSGLGIGDSLHLSDLKLPPGVKLNMKGDSTVVTI 173 Query: 185 VAPISGS 191 V P Sbjct: 174 VPPEDAE 180 >gi|183219660|ref|YP_001837656.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909797|ref|YP_001961352.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774473|gb|ABZ92774.1| 50S Ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778082|gb|ABZ96380.1| 50S ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 211 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 3/181 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ + A R GKG AR +R G +PA I G+ + K ++ K+I K + S Sbjct: 1 MEKISIKAQPRTSTGKGPARRMRVEGLVPANIIGSG-EAKSASVVEKEIQKLIDSGIRKA 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ L++ + V K+ Q P + + H DF +V+ G + V ++ + G K Sbjct: 60 TLIDLELDGKSEKVFVKEIQRFPHTGQIRHIDFYKVTPGKKIQTTVAIKTTG--VAKGSK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+ + HE+ + ++ D ITVD+ L IG I + ++ P+ + + +A Sbjct: 118 AGGQFEHLVHEIKVKSTPEDLTDVITVDVTGLDIGMMIKVSELPHPQSWEILVNGDPIVA 177 Query: 183 T 183 + Sbjct: 178 S 178 >gi|150006312|ref|YP_001301056.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides vulgatus ATCC 8482] gi|254885161|ref|ZP_05257871.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294776297|ref|ZP_06741781.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|319641348|ref|ZP_07996043.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] gi|166223663|sp|A6L6X0|RL25_BACV8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149934736|gb|ABR41434.1| putative 50S ribosomal protein L25 [Bacteroides vulgatus ATCC 8482] gi|254837954|gb|EET18263.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294449884|gb|EFG18400.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|317387029|gb|EFV67913.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] Length = 198 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K ++ +R VGK + LRKN +P ++YG D ++ + + +Y Sbjct: 1 MKSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ E Sbjct: 61 TPHIY--VVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GGKL + ++ + N IP+ + VD+ L +G ++ + ++ E ++ Sbjct: 117 LAEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTVKVGELSY-EGLELINA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] gi|227235227|gb|EEI85242.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] Length = 216 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 5/180 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ GK + +RKN IP +IY + + +A+D K L + +TI+ Sbjct: 4 IVLQAEKREATGKNQVKKIRKNELIPGVIYAKNQENVNVQFTARDFEKVLR-QAGTSTII 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TLDI E V+ K++ P + +H DF + + + V VPV +N + + G Sbjct: 63 TLDINGEGKEVLIKEFASHPYKNQFLHVDFQAIDQNQPIRVTVPVVLLNRDDMNEV--NG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 L V + C IP + +D+ +L+IGD+ + D+ + E + + + + + + Sbjct: 121 VLVQNLENVEVECLPKYIPQTAEIDVKELQIGDNKTVADLDIASNENITILVEEDEVVCS 180 >gi|118619723|ref|YP_908055.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium ulcerans Agy99] gi|118571833|gb|ABL06584.1| 50S ribosomal protein L25 RplY [Mycobacterium ulcerans Agy99] Length = 214 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G++PA++YG+ ++P+ + L A D + L + + +LT Sbjct: 8 QLVVTVRTETGKGASRRARREGKVPAVMYGHGAEPQHLELPAHDYAAVLRN-SGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + K + P+ + HAD + V G V V V V +PG Sbjct: 67 LDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEGH-AAPGT----L 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + + G I LP +S + + +V Sbjct: 122 VTQEANTIEIEAEAMSIPEQLTVSIEGAEPGTQFTAGQIELPAGVGLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] Length = 233 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++AV R K K AR +R +G IPA++YG D + + K I++ L+S++ TI Sbjct: 9 IAAVPRTGKFNKNHARRVRVSGLIPAVVYGAGQDSVAVTVDPKAITRILHSESGHNTIFD 68 Query: 67 LDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L + +V + D+Q +P+ L+H DF +++ + V VPV G+K G Sbjct: 69 LSVEGTGVVKAMIVDWQYEPIKGKLLHIDFKRIAMDKAMRVSVPVMLTG--VPVGVKNSG 126 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+ + EV + C +IP I VD+ L++ +IH+ D+ K + + +A + Sbjct: 127 GILDQILREVQIECLPGDIPSHIDVDVAGLELYGAIHVADLPHGGKIKFLEEETALVAHV 186 Query: 185 VA 186 Sbjct: 187 TV 188 >gi|224026159|ref|ZP_03644525.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] gi|224019395|gb|EEF77393.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] Length = 198 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K ++ +R + GK + LRKN +P ++YG D ++ + +Y Sbjct: 1 MKSIEIKGSLRTETGKKATHSLRKNNGVPCVLYGIQKDENGNPVATHFTVTTDGLRNLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DFLQ+ E + + + VPV+ E Sbjct: 61 TPHIY--VVDLNIDGKVVNAIMKDIQFHPVTDAILHVDFLQIDEANPIVMEVPVQL--EG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GGKL + ++ + N IP+ + VD+ L +G +I + ++ E ++ Sbjct: 117 LAEGVKAGGKLALQIRKLKVKALYNVIPERLIVDVTSLGLGKTIKVGELNY-EGLQLLNA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|183984442|ref|YP_001852733.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] gi|183177768|gb|ACC42878.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] Length = 214 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R + GKG++R R+ G++PA++YG+ +P+ + L A D + L + + +LT Sbjct: 8 QLVVTVRTETGKGASRRARREGKVPAVMYGHGEEPRHLELPAHDYAAVLRN-SGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI E + K + P+ + HAD + V G V V V V + +PG Sbjct: 67 LDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEG-DAAPGT----L 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + ++ G I LP +S + + +V Sbjct: 122 VTQEANTIEIEAEAMSIPEQLTVSIEGVEPGTQFTAGQIELPAGVGLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. ORS278] gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS278] Length = 191 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 91/145 (62%), Gaps = 1/145 (0%) Query: 46 LSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 + +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH DF+++ +G+T+ Sbjct: 1 MEDRELRQRILAGRFLTTIFDVTLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIR 60 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V VP+ + SPG+K+GG +N+V H + L C A NIP I D++ L+I S+H+ D+ Sbjct: 61 VSVPLHVVGSEGSPGVKRGGTVNIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDV 120 Query: 166 RLPEKTSSMSQ-LNITIATIVAPIS 189 +LP ++S+ + T+ TIV P Sbjct: 121 KLPTGVKTLSRGEDATLVTIVPPSG 145 >gi|327534405|gb|AEA93239.1| 50S ribosomal protein L25 [Enterococcus faecalis OG1RF] Length = 202 Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNSYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|310287383|ref|YP_003938641.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] gi|309251319|gb|ADO53067.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] Length = 208 Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N Sbjct: 1 MAN-TIKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFSISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + V E+ + N+P+ I V+++ L G + ++D+ LPE M Sbjct: 117 VAF-----VDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPEGAELDMDDPET 171 Query: 180 TIATIVAP 187 ++ ++ P Sbjct: 172 SVVSVEVP 179 >gi|224282940|ref|ZP_03646262.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|311064224|ref|YP_003970949.1| 50S ribosomal protein L25P RplY [Bifidobacterium bifidum PRL2010] gi|313140099|ref|ZP_07802292.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|310866543|gb|ADP35912.1| RplY LSU ribosomal protein L25P [Bifidobacterium bifidum PRL2010] gi|313132609|gb|EFR50226.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] Length = 208 Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N Sbjct: 1 MAN-TIKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFSISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + V E+ + N+P+ I V+++ L G + ++D+ LPE M Sbjct: 117 VAF-----VDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPEGAELDMDDPET 171 Query: 180 TIATIVAP 187 ++ ++ P Sbjct: 172 SVVSVEVP 179 >gi|119357476|ref|YP_912120.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides DSM 266] gi|166223674|sp|A1BH19|RL25_CHLPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119354825|gb|ABL65696.1| LSU ribosomal protein L25P [Chlorobium phaeobacteroides DSM 266] Length = 198 Score = 167 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 8/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRK G +PA+IY + ++++ + K ++S + Sbjct: 1 MEIIALGVEPR-IIRKKEAAKLRKTGIVPAVIYHKGEETISVSVNEIALKKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + V KD Q DPV+D +IH DF S V + VPV + G+ Sbjct: 58 HIIDLKFPDGKTVRSFIKDVQFDPVTDRIIHTDFQLFSADELVEMDVPVGTTG--DAVGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNI 179 ++GG++ ++ H ++L ++PD +D +L+IG SIH+ +I + + M + Sbjct: 116 EKGGRIQIIKHALTLKGMPADMPDHFLIDCTNLEIGHSIHVREIPMDARPGLTIMDDPDT 175 Query: 180 TIATIVAPI 188 + TIVAP Sbjct: 176 PVVTIVAPK 184 >gi|289642500|ref|ZP_06474644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] gi|289507674|gb|EFD28629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] Length = 213 Score = 167 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG AR RK G++PA++YG+ P+ I+L A D+ + Sbjct: 1 MSEVRIVAEPRTEFGKGGARRTRKAGKVPAVLYGHGQPPRHISLRAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L++ +PKD Q P+ H D + + G VTV VPV + +S + Sbjct: 61 VLLRLELSDGTQLALPKDVQRHPIKGSFEHVDLVIIRRGERVTVEVPVTVVGTAESDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++ VSL A +IP SI VD+ K G +I + +P T + + Sbjct: 120 ----VDQQLTSVSLQAAATDIPGSIEVDVTGFKAGANISAGQLVIPAGTVLETDPEQVVV 175 >gi|283783322|ref|YP_003374076.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] gi|283442055|gb|ADB14521.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] Length = 207 Score = 167 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 9/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ GKE + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 VAF-----VDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPEGVELDMDGEES 171 Query: 181 IATIVA 186 + ++ Sbjct: 172 VVSVTV 177 >gi|254416190|ref|ZP_05029945.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] gi|196177123|gb|EDX72132.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] Length = 210 Score = 167 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E K+ R + K + LR+ G IPA +YG+ ++ + + AK L + T Sbjct: 2 EVKVECHKRAEGSK--PKALRREGLIPATLYGHKGAESVALTVEAKAAETLLKQADINHT 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++I + ++ Q P IL H F V+ T+ + +PV + + G+ Sbjct: 60 AVQVNIPDLSWNGKALLREVQTHPWKPILYHLSFFSVASQDTIQISLPVNLVG--TAFGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG L V E+ + C ++IP++I VD+++L IG S+H+ +I LP ++M + Sbjct: 118 KQGGILEHVMTELQVECAPDSIPEAIEVDISNLDIGASLHVHEILLPSGATAMDDPQRPV 177 Query: 182 ATIV-API 188 I+ AP Sbjct: 178 VNILGAPT 185 >gi|325954510|ref|YP_004238170.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] gi|323437128|gb|ADX67592.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] Length = 206 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + V R+ VGK + R LR Q+P ++YG + A K +Y+ T Sbjct: 1 MKSITIQGVKRESVGKVATRALRNAEQVPCVVYG-GQETIHFAADEKAFKGLVYTPEAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ VH I +D Q PV+D ++HADF Q+ + +T+ VPVR + ++ G+ Sbjct: 60 VNVELN-DGTKVHAILQDIQFHPVTDRILHADFYQLKDDKEITIEVPVRLVG--RARGVV 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD + +D+ ++IG ++E ++ + + N + Sbjct: 117 AGGVLRFNMRKLKVRAIPANLPDEVVIDITSMRIGAKKYVESLKNDK-YTFAHPDNSVVV 175 Query: 183 TI 184 I Sbjct: 176 AI 177 >gi|222099805|ref|YP_002534373.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] gi|254801063|sp|B9K7S4|RL25_THENN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221572195|gb|ACM23007.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] Length = 215 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 L +R GK A+ LR+ G++PA++YG +DP P+ + + K ++ T I Sbjct: 2 VSLEVRLRTPKGKREAKRLRRRGEVPAVVYGPATDPIPVKIKRSLLEKVFHTITETTPIR 61 Query: 65 LTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + +E V K Q D VS+ ++H DF + +G + ++VP++ + K G Sbjct: 62 LVIKDDEERTVSEKTVFLKMIQRDKVSEAIVHVDFYEPVKGHRMRINVPLKVVG--KPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVYHEEIPVETDPDRVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEDEEA 179 Query: 181 IATIVAPI 188 + +I+ P Sbjct: 180 VVSILVPK 187 >gi|167579760|ref|ZP_02372634.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis TXDOH] gi|167617836|ref|ZP_02386467.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis Bt4] Length = 167 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C ++P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAESSPAVKLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSS---MSQLNITIATIVAPISG 190 +DI LP + + N +A+ P Sbjct: 121 AKDIVLPNGVALTPHVDAENPVVASATIPAGA 152 >gi|312889384|ref|ZP_07748938.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] gi|311298261|gb|EFQ75376.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+LLR G++PA++YG + +A+S D+ +Y+ Sbjct: 1 MKSITISGSPRESVGKRDAKLLRYEGKVPAVLYGGATQ-THLAVSVTDLKAVVYTPVVHF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++ + I KD Q P+++ +IH DFL++ VT+ +P+R SPG+K Sbjct: 60 --INLEVAGKTAQAIIKDIQFHPLTEEIIHVDFLELDAAKPVTIEIPIRLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + + D+I V + L++G S+ + D++L EK + + TI Sbjct: 116 TGGKLVQKLRKLRIKALPGDHIDNIDVSIATLEVGKSVRVSDLKL-EKLIITNAIEDTIV 174 Query: 183 TIV 185 ++ Sbjct: 175 SVT 177 >gi|296122874|ref|YP_003630652.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] gi|296015214|gb|ADG68453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] Length = 216 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+S R K+G R LR +G +P I+YG+ +P+P+ + I + S + ++ Sbjct: 6 KVSVKKRQKLGTAETRRLRLSGLVPGIVYGHQQEPQPVVVDETLIHPIVVSGH---KVVD 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ L I +D Q+DP + ++ H DF++V VTV V + +PGI GG Sbjct: 63 LDVEGVLEKAIIRDVQVDPFTRLIQHIDFMRVDPNERVTVDVAIELKG--TAPGILSGGM 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H + + C A IPDSI V ++DL++G IH+ ++ +P +Q + + +V Sbjct: 121 LEHQLHSIKVDCLAYQIPDSIVVKVSDLQLGGVIHVNELEIPPGVHVQTQGELIVVHVV 179 >gi|149280711|ref|ZP_01886821.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] gi|149228535|gb|EDM33944.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] Length = 192 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG A+ ++ +YS Sbjct: 1 MKTVAISGSTRENVGKRDAKELRYEGKVPAVLYGGKEQA-HFAVVTTELKDAIYSPEASF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL+ + I K+ Q P++D L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 60 VEITLN--GTKTNAIIKELQFHPLTDQLLHVDFLQLFDDKEILMEIPVKLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITI 181 GGKL ++ + ++P ++ V + L++G+ + D+ + ++ TI Sbjct: 116 MGGKLVQKLRKLRVRSFPKDMPQAVEVSIAKLEVGNLFRVRDLE--KGNYVVTNTPEDTI 173 Query: 182 ATI 184 ++ Sbjct: 174 VSV 176 >gi|224438056|ref|ZP_03658995.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter cinaedi CCUG 18818] gi|313144501|ref|ZP_07806694.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] gi|313129532|gb|EFR47149.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] Length = 178 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG + A D K + K+ T I + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQENIHCAFKLNDFIKAVKHKS--TLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + + V+ ++YQ DPV++ +IH D L +G VPV + G+K G L Sbjct: 60 KVDGKTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSVKG--SAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C A +P++ +D++DL +GDSI + D+ + S +++ ++ + ++ Sbjct: 118 FISTKRISVKCTAEKLPNTYELDVSDLDVGDSILIRDLPQLDGVSVLNRPSVAVVGVI 175 >gi|329917506|ref|ZP_08276486.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] gi|327544536|gb|EGF30044.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] Length = 176 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 4/151 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I+L + L + F ++IL L+I ++ V+ +D+Q+ +++HADF +V Sbjct: 2 NISLDHNALYHALKKETFHSSILDLEIDGKVEKVLLRDFQVHAYKQLVLHADFQRVDASQ 61 Query: 103 TVTVHVPVRFINENKSPGIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + V VP+ FIN SP +K G ++ V E+ + C ++P+ +TVDL L+IG SIH Sbjct: 62 KIHVKVPLHFINGEASPAVKMSAGIISHVVSELEVTCLPADLPEFLTVDLGALEIGSSIH 121 Query: 162 MEDIRLPEKTSSMS---QLNITIATIVAPIS 189 + D+++P + + N TIA P Sbjct: 122 LADLQMPNGVTPVIHGGDDNPTIAAASVPAG 152 >gi|212696420|ref|ZP_03304548.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] gi|212676592|gb|EEB36199.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] Length = 214 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L + R+ VGK LR+ +P ++YG + + +++D K L S+ +TI Sbjct: 3 DIVLKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKVL-SQAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD+ E V V+ KDYQ+ P H DF ++ + V VPV + + Sbjct: 62 IDLDLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIR--VEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIA 182 L V + C IP V + +++IGD+ + D+ + E + + + + + Sbjct: 120 SVLVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFTVADLDIAKDENINILLEDDEVVC 179 Query: 183 TIVAP 187 ++ P Sbjct: 180 SLQEP 184 >gi|229548761|ref|ZP_04437486.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257421071|ref|ZP_05598061.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|312951809|ref|ZP_07770700.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|229306101|gb|EEN72097.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257162895|gb|EEU92855.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|310630212|gb|EFQ13495.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|315154236|gb|EFT98252.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0031] gi|315156368|gb|EFU00385.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0043] Length = 202 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + ++ ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKITVDEKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] Length = 155 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 82/144 (56%) Query: 46 LSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 +S + K L F++T++ L++ + V+ + Q V D+ H DFL+++ + V Sbjct: 1 MSFNVLLKTLRQGGFLSTLIDLNVDGKTERVVCRGVQRHVVKDLPTHVDFLRLAPTTRVK 60 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 +H+PV F NE +PG+K GG + V E+ L AN+IP+ +TVDL KIGD IH++D+ Sbjct: 61 LHIPVHFENEAAAPGVKLGGTVVHVRSEIELEVTANDIPEFVTVDLTGRKIGDVIHIQDV 120 Query: 166 RLPEKTSSMSQLNITIATIVAPIS 189 LP+ + N IA I AP Sbjct: 121 TLPKGAVPTTDRNFAIANISAPSG 144 >gi|315301103|ref|ZP_07872397.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] gi|313630524|gb|EFR98363.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] Length = 207 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTKLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ DIL+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDILVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 L + H+V + +P++I +D++ L+IGD + D LPE Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTND--LPEN 162 >gi|298252739|ref|ZP_06976533.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] gi|297533103|gb|EFH71987.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] Length = 207 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 9/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAQLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ GKE + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 VAF-----VDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPEGVELDMDGEES 171 Query: 181 IATIVA 186 + ++ Sbjct: 172 VVSVTV 177 >gi|332711867|ref|ZP_08431797.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] gi|332349195|gb|EGJ28805.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] Length = 183 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K R LR++G IP ++YG+ ++ + ++AK L + + T+ Sbjct: 3 VTVECQKRPEGSK--PRALRRSGLIPTVLYGHNGAESVSLTMTAKAAEDLLKTASVNNTL 60 Query: 65 LTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L I + V+ ++ Q P + L H F V+ + V V VP++ + E + G+K Sbjct: 61 IELSIPDISWNGPVLLREIQSHPWKNSLYHLSFFSVASQNKVEVVVPLKLVGE--AVGVK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QGG L V + CP + IP++I +D+++L+ G +++ ++ LPE M + +++ Sbjct: 119 QGGILQQRLTTVKVQCPPDKIPETIDIDISNLEQGKMLYIYELVLPEGIEVMDEPKLSVL 178 Query: 183 TIV 185 I Sbjct: 179 AIT 181 >gi|261405174|ref|YP_003241415.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281637|gb|ACX63608.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 191 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 5/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + K + LR +G+IPA+++G + I LSAK+ K +++N IL Sbjct: 3 VNLRAEARAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGK--WARNGKGGIL 60 Query: 66 TLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L E + V+ + Q DPV+ IH DFL+++ V V + +I + G K G Sbjct: 61 ELHFEDREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIG--TAKGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + V + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++ Sbjct: 119 GVVQIQSTFVEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSV 178 Query: 185 VAPI 188 V P Sbjct: 179 VTPK 182 >gi|15827041|ref|NP_301304.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae TN] gi|221229519|ref|YP_002502935.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae Br4923] gi|13633840|sp|Q9CD48|RL25_MYCLE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13092588|emb|CAC29753.1| putative 50S ribosomal protein L25 [Mycobacterium leprae] gi|219932626|emb|CAR70338.1| putative 50S ribosomal protein L25 [Mycobacterium leprae Br4923] Length = 215 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 8/190 (4%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + KLS +R GKG++R R++G++PA++YG+ +P+ + L A S L Sbjct: 1 MAKSTVNKLSVSVRTNTGKGASRRARRDGKVPAVLYGHGEEPQHLELPAHAFSAVLRH-V 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTL++ + + K + P+ ++HAD L V G + V VPV + Sbjct: 60 GTNAVLTLEVAGKEQLALTKAIDVHPIRHTIMHADLLVVRSGEKIVVEVPVEVEGDAGPD 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + A +IP+ +T+ + + G I LP + +S + Sbjct: 120 IL-----VTQETTSIEIEAEALSIPEQLTMSIEGAEPGTQFTARQIPLPVGVTLVSDPEM 174 Query: 180 TIATIV-API 188 + +V AP Sbjct: 175 LVVNVVNAPT 184 >gi|330995949|ref|ZP_08319844.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] gi|329574288|gb|EGG55863.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] Length = 197 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSA--KDISKRLY 56 KE + +R GK +AR +R+ +P +YG D P +A + ++ +Y Sbjct: 1 MKEINVKGTVRTVFGKKAARDIRRANAVPCNLYGEAKDENGAPVALAFTTTNDELRNLIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 S + ++ L+I + + K+ Q PV D ++H DF +++E + + VP++ Sbjct: 61 SPDIY--VVNLNIDGKEYKAVLKELQFHPVKDNVLHVDFYEITETKPIIMEVPIKLNG-- 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GG+L ++ + IP+ + +D+ L +G +I + ++ + ++ Sbjct: 117 LAEGVKAGGRLAASVRKLKVKSVYTQIPERLNIDVTSLGLGKTIKVGELHF-DGLELVTS 175 Query: 177 LNITIATI 184 + + + Sbjct: 176 KEVVVCQV 183 >gi|325478656|gb|EGC81767.1| ribosomal protein L25, Ctc-form [Anaerococcus prevotii ACS-065-V-Col13] Length = 216 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 5/181 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A R+ GK LR +PA+IY + + +++++ K L K +TI Sbjct: 3 EIVLQAQKREATGKNKVNKLRNEELVPAVIYAKGEENINVQVTSREFEKVLK-KAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLD G E V+ K YQ P +I +H DF +++ T+ V VPV + + + Sbjct: 62 ITLDFGDEKKDVLIKAYQNHPFKNIFLHVDFQAINQNETIRVQVPVVLVGRDDIR--VEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIA 182 L V + C IP + V+++DL+IGD+ + D+ + + + + + + I Sbjct: 120 SVLVQNIDVVEVECLPRYIPQTADVEVSDLQIGDNRTVSDLDIAKVDDITILLEDDEVIC 179 Query: 183 T 183 + Sbjct: 180 S 180 >gi|167561485|ref|ZP_02354401.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis EO147] gi|167568715|ref|ZP_02361589.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis C6786] Length = 167 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF +V Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C +P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSSMSQ---LNITIATIVAPISG 190 +DI LP + ++ N +A+ P Sbjct: 121 AKDIALPNGVALVAHVDAENPVVASATIPAGA 152 >gi|19552165|ref|NP_600167.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|62389830|ref|YP_225232.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|71153139|sp|Q8NRV2|RL25_CORGL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21323705|dbj|BAB98332.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] gi|41325165|emb|CAF19646.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] Length = 200 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 7/186 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMT 62 K + A +R + GKGSAR R GQIPA++YG + + + + + + + Sbjct: 3 KYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTIDHRTFAALVRQEGV-N 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + + K + ++ + H D L + G V V VPV E +PG Sbjct: 62 AVLELDIEGQKQLTMIKHIDQNVLTFHIDHLDLLAIKRGEKVEVDVPVIVEGEP-APGTM 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + +IP+ TV + L++G I DI+L T+ + I Sbjct: 121 W----VQDADTIKVEADVLSIPEEFTVSIEGLELGAQITAADIKLEGDTTLVEDPETLIV 176 Query: 183 TIVAPI 188 IV P Sbjct: 177 NIVLPA 182 >gi|226309687|ref|YP_002769581.1| 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] gi|226092635|dbj|BAH41077.1| probable 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] Length = 202 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 7/180 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L A R+K + ++LR G +P I+YG+ KPI + +++ L ++ Sbjct: 3 QLQAQSREKKTGNAVKVLRNEGWVPGIMYGSEVGNKPIQVKGRELDAALRQQS-TNKPFR 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + V+ + Q P+ ++HADF +++ + VPV + + G Sbjct: 62 LSVDGNTHDVMVYELQRHPLQGNILHADFKKINMNEKIHTSVPVLMTGDPEL------GV 115 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +V H V + C NIP+S VD++ IGD + + D+ +P + +++ Sbjct: 116 ATLVRHSVEVTCLPGNIPESFLVDVDGFNIGDVVLVGDLTVPPGVELGLDSTEVLISVLP 175 >gi|330836938|ref|YP_004411579.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] gi|329748841|gb|AEC02197.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] Length = 210 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M LSA +R G +R + ++G+IPA+IYG + P I + A++ + Sbjct: 1 MKDTSKTLSAELRTGDFGSSGSRRVVRSGKIPAVIYGKNT-PLHITIDAQEFRLK-RRYF 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++L++ + K+ + KD Q D +++ + H DF +V+ G T+ V + Sbjct: 59 TETSLLSIVLSKKKHECLVKDVQEDLLNNRIKHVDFYEVTSGQTLHTRVNIELTG--NPV 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + GG L + ++ + N+P+ I VD++ L + D + + D+ P +++ Sbjct: 117 GARDGGVLEHILFDIEIESLPANLPEVIRVDVSQLGLNDVLTVGDVVWPVGVKALADAET 176 Query: 180 TIATI 184 +AT+ Sbjct: 177 AVATV 181 >gi|240169901|ref|ZP_04748560.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L +R GKG++R R++G+IPA++YG+ ++P+ + L D + L + +LT Sbjct: 8 QLKVTVRTATGKGASRRARRDGRIPAVLYGHGAEPQHLELPGHDFAAVLRH-SGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V G V + G Sbjct: 67 LDIAGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVV-----VEVAVVVEGEAASGTL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + D + G I LP + +S + + +V Sbjct: 122 VTQEANAIEIEAEALSIPEHLTVSVEDAEPGTQFTAGKIALPRGVNLISDPELLVVNVVN 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|306822823|ref|ZP_07456199.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] gi|304553455|gb|EFM41366.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] Length = 212 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 9/181 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR LR IPA +Y P + L K+ + L N + Sbjct: 18 TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---AL 74 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G + I KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 75 FTIKYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 133 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 134 ----VDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEESVVT 189 Query: 184 I 184 + Sbjct: 190 V 190 >gi|313674668|ref|YP_004052664.1| LSU ribosomal protein l25p [Marivirga tractuosa DSM 4126] gi|312941366|gb|ADR20556.1| LSU ribosomal protein L25P [Marivirga tractuosa DSM 4126] Length = 214 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK A+ LR +PA++YG + +++ Sbjct: 1 MKTVEIIGYKRANLGKKEAKRLRAEAMVPAVLYGGD-EQIHFYAPMILFRPLVFTAEAHF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++I + I +D PVS+I++HADFLQ+ +G + +++PV E +PG+ Sbjct: 60 --VNINIEGDEYQAILQDVAFHPVSEIILHADFLQLHKGKNIKMNIPVHL--EGTAPGVT 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + + ++P+ IT+D++ L G SI +E + + E + +IA Sbjct: 116 KGGTLIHKRRSLLVKALPKDMPEHITLDISALDFGKSIKVESVSV-ENCEILDTPQASIA 174 Query: 183 TIVAPIS 189 + P + Sbjct: 175 VVEIPRA 181 >gi|297621050|ref|YP_003709187.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] gi|297376351|gb|ADI38181.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] Length = 186 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNFMT 62 KL R K +R LR G+IPA++Y D + IA+ A D L + T Sbjct: 1 MKLKFEQRTAEKKSDSRSLRNLGKIPAVLYVRGKDSEAIAVDAADFETVLRTVKKGRLST 60 Query: 63 TILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T L L G + +V+ KD Q + ++H DF ++ + + V VP+ + E GI Sbjct: 61 TKLALVDGTGKERNVLVKDIQYHVTTYNVLHLDFEELLDNVKIKVKVPIECVGEVDCVGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG L V + + C ++P+ +D+ L + +S + D+ +PE + LN Sbjct: 121 KLGGVLRRVIRYLRVHCLPKDLPEFFKMDVKTLGLKESRKLSDLEIPETVRPLMDLNEVA 180 Query: 182 ATIV 185 TI Sbjct: 181 VTIA 184 >gi|327542674|gb|EGF29145.1| Ribosomal protein L25 [Rhodopirellula baltica WH47] Length = 205 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + R+ G + R LR++G +PA++YG+ + +A+ + + K L + T L+ Sbjct: 5 IQVTKRESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQV-KGLLRHHSKTVQLSG 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + D Q DP+ ++H D ++V+ V + VP+ E + G+++GG L Sbjct: 64 DVD---ETALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVLHGE--AVGVREGGML 118 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 HEV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 119 LENVHEVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEA 177 >gi|32476153|ref|NP_869147.1| 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] gi|71153164|sp|Q7UKU9|RL25_RHOBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32446697|emb|CAD76533.1| probable 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] Length = 212 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 6/179 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + R+ G + R LR++G +PA++YG+ + +A+ + + K L + T L+ Sbjct: 12 IQVTKRESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQV-KGLLRHHSKTVQLSG 70 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + D Q DP+ ++H D ++V+ V + VP+ E + G+++GG L Sbjct: 71 DVD---ETALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVLHGE--AVGVREGGML 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 HEV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 126 LENVHEVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEA 184 >gi|150387891|ref|YP_001317940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947753|gb|ABR46281.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 204 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L + +R++ G ++ R G +PA+IYG + + + ++ + ++ ++ + Sbjct: 6 LVSSLRNETGSNASHRSRDLGNVPAVIYGKSINTLTVEIERTEVEAFVRNQGGKG-LVQV 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK- 126 ++G + K+ Q DPV+ +++H DF QV++ + VP+ +++GG Sbjct: 65 NVGGQPYTTFVKEMQRDPVTGMIMHVDFQQVNQDEQIHTMVPIILKGRGF---VEKGGVT 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + E+ + C A +IP+ D+++ + GD++ + D+ E+ S ++ L IA+I Sbjct: 122 VQQQVRELEVQCFAGSIPEKFEFDISNFRPGDTLKVSDVEFGEEVSIINNLESVIASIAT 181 Query: 187 PI 188 P Sbjct: 182 PA 183 >gi|171743014|ref|ZP_02918821.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] gi|171278628|gb|EDT46289.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] Length = 212 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 9/181 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR LR IPA +Y P + L K+ + L N + Sbjct: 18 TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---AL 74 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G++ I KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 75 FTIKYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 133 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 134 ----VDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEESVVT 189 Query: 184 I 184 + Sbjct: 190 V 190 >gi|257870925|ref|ZP_05650578.1| ribosomal protein L25 [Enterococcus gallinarum EG2] gi|257805089|gb|EEV33911.1| ribosomal protein L25 [Enterococcus gallinarum EG2] Length = 204 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G D PIA++A ++ + L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYQVDSTPIAVNAAELERLLR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+++ + V+ + K++Q D + L H +F+ V V + + + G+K G Sbjct: 61 ITMNLEGKKVNTLIKEFQSDTFTRALTHVEFISVDMNEETEVEAELTLVG--DAAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ L+IGD++ + D+ + + +++ I + Sbjct: 119 GVLTQNLYSVVVSATPDKLPERIEVDVTGLEIGDALTVGDLEKNDDYTIVTEAEEQIVAV 178 Query: 185 V 185 Sbjct: 179 A 179 >gi|294673023|ref|YP_003573639.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] gi|294474355|gb|ADE83744.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] Length = 198 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 96/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG--NMSDPKPIAL----SAKDISKRLY 56 KE +S R GK +++ +RK G +P +YG + P++L A + + +Y Sbjct: 1 MKEISVSGQKRATTGKKASKEMRKEGLVPCNMYGEAKGENGLPVSLSFAIPASQLRRVVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 S + ++ L I E + K+ Q P +D L+H DF +V+E +T+ +PV+ + Sbjct: 61 SPDVY--VVNLTIDGEAHKAVMKELQFHPTTDALLHVDFYEVNEEKPITIGIPVKLVGH- 117 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG+L+ +++ P IP+ + VD+ +LK+G +I + ++ + + Sbjct: 118 -AQGVRDGGRLSQAVRTLNVTAPYKQIPEVLNVDVTELKLGKAIKVAELNF-DGLQIATP 175 Query: 177 LNITIATI 184 + + ++ Sbjct: 176 AQVVVCSV 183 >gi|255023564|ref|ZP_05295550.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-208] gi|313611269|gb|EFR86036.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes FSL F2-208] Length = 207 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 5/165 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 L + H+V + +P++I +D++ L+IGD + LPE Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTN--NLPEN 162 >gi|332298401|ref|YP_004440323.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] gi|332181504|gb|AEE17192.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] Length = 185 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 100/190 (52%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQ ++AV R + GK A+ LR+NG++PA++Y + + + + + +K ++ Sbjct: 1 MDQ--LVVNAVTRTETGKRVAKKLRENGRLPAVMYNSKGEAVMLDIDEVEFTK-VWKSAT 57 Query: 61 MTTILTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 TT++ L + + + V KD + D +D +HADF + E + V + V Sbjct: 58 PTTLVNLKLDGKSDNLVFIKDTEYDIKTDRNLHADFHAIDEKKALKVTMKVLLSG--NPA 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+++GG L ++++ C N+P +T D++ L +G ++D+ L ++ + +S Sbjct: 116 GVREGGFLTTHQSQITIQCLPKNLPIRVTADISGLGVGQVFRVKDLGLAKEITVLSDPEA 175 Query: 180 TIATIVAPIS 189 +A++ AP + Sbjct: 176 ALASVSAPRT 185 >gi|294790835|ref|ZP_06755993.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] gi|294458732|gb|EFG27085.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] Length = 201 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 9/182 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L R++ GKG+AR +R G IPA IY ++P + L K+ + + N + Sbjct: 3 DITLEGEARNEFGKGAARRMRLAGFIPATIYEGGNEPAFVKLPQKEATLAMRHAN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + GKE + ++ Q +PV + H DF +V G V V VPV + K + Sbjct: 60 IEIKYGKESKLAVAREIQRNPVKRTIEHIDFYEVHAGEKVEVEVPVFIEGDPKGAAVAF- 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIAT 183 V +++ +N+P++IT+ + L GD + +D++LPE + +I + Sbjct: 119 ----VDVQNLTVRADVSNLPENITISVEGLVEGDHVFAKDVKLPENAELVIDDPEESIVS 174 Query: 184 IV 185 ++ Sbjct: 175 VM 176 >gi|32266993|ref|NP_861025.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter hepaticus ATCC 51449] gi|71153145|sp|Q7VG30|RL25_HELHP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32263045|gb|AAP78091.1| ribosomal protein L25 [Helicobacter hepaticus ATCC 51449] Length = 178 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG A D K + K T I + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQQNIHCAFKLNDFIKAMKQK--TTLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ ++YQ DPV++ LIH D L +G VPV + G+K G L Sbjct: 60 QVGGKTLEVVIQEYQKDPVTNTLIHVDLLLAQKGILNKYKVPVIVKG--NAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C A N+P++ +D++DL +GDSI + D+ + + +++ ++ + ++ Sbjct: 118 FISTKRISVKCAAENLPNAYEIDVSDLDVGDSILIRDLPQFDNVNVLNRPSVAVVGVI 175 >gi|255530495|ref|YP_003090867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] gi|255343479|gb|ACU02805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] Length = 192 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG + A+ D+ +Y+ Sbjct: 1 MKTIAISGSPRENVGKRDAKELRYEGKVPAVLYG-GKEQVHFAVVIADLRDAIYTPEANF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + I + I K+ Q P++D+L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 60 --VEIAINGNKIKAIIKELQFHPLTDVLLHVDFLQLFDDKEILMEIPVKLTG--TSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P ++ V + L++G+ + D+ + + + TI Sbjct: 116 MGGKLVQKLRKLRVKAFPKDMPQAVEVSIAKLEVGNLFRVRDLEKGK-YTVTNTGEDTIV 174 Query: 183 TI 184 ++ Sbjct: 175 SV 176 >gi|327403219|ref|YP_004344057.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] gi|327318727|gb|AEA43219.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +LS R VGK A+ LR G +P ++YG + +L + K +++ + Sbjct: 1 MKVAQLSGSPRANVGKKDAKALRDAGLVPCVLYGQGTQ-THFSLPDIKVEKLIFNPDVFK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + LDI + + I ++ Q +P++D ++H DFL++ V V +PVR S G+ Sbjct: 60 --IELDIDGKKSNAIIQEIQQNPITDKVVHIDFLELDAKKPVKVALPVRLTG--ASRGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L V + ++ ++P++I +D+ L+IG S+ ++D+ + + N + Sbjct: 116 AGGRLMQVFRRLRVVGLPADLPEAIVIDITKLRIGQSVRVKDLEN-DGLTISEAKNAVVV 174 Query: 183 TIVAPISGS 191 ++ S Sbjct: 175 SVKMARGAS 183 >gi|167835375|ref|ZP_02462258.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis MSMB43] Length = 167 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C ++P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSS---MSQLNITIATIVAPISG 190 ++DI LP + + N +A P Sbjct: 121 VKDIALPNGVALTPHVDAENPVVALATIPAGA 152 >gi|309801272|ref|ZP_07695401.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] gi|308222161|gb|EFO78444.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] Length = 198 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 9/181 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR LR IPA +Y P + L K+ + L N + Sbjct: 4 TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G + I KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 61 FTIKYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEESVVT 175 Query: 184 I 184 + Sbjct: 176 V 176 >gi|329930032|ref|ZP_08283657.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328935431|gb|EGG31903.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 191 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + K + LR +G+IPA+++G + I LSAK+ K +++N IL L Sbjct: 5 LRAETRAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGK--WARNGKGGILEL 62 Query: 68 DIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 E + V+ + Q DPV+ IH DFL+++ V V + +I + G K GG Sbjct: 63 HFEDREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIG--TAKGAKSGGV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + + + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++V Sbjct: 121 VQIQSTFIEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSVVT 180 Query: 187 PI 188 P Sbjct: 181 PK 182 >gi|51893432|ref|YP_076123.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153113|sp|Q67M16|RL252_SYMTH RecName: Full=50S ribosomal protein L25 2; AltName: Full=General stress protein CTC 2 gi|51857121|dbj|BAD41279.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 6/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R G ++R LR+ G +P IIYG +P +++ + + + + + ++ Sbjct: 1 MQLEATPR-GTGSRASRRLRQAGFVPGIIYGPGVEPLAVSVRSTQLERLVERQ-GRGHLI 58 Query: 66 TLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + E V+ K Q D ++ + H DFLQV T+T+ VP+ + E ++ ++ Sbjct: 59 HVQVEGEANPRQVVIKQLQRDILTQQVTHVDFLQVDMNRTITLTVPIVVVGEEQAR--RR 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + EV + C IP+++T+D++ L + + P + + + + Sbjct: 117 GLLITHELDEVEVECRPTEIPEAVTLDVSGLTEPGPVTAASLSAPPGVRVLEDPDTVVVS 176 Query: 184 IVAPISGS 191 G Sbjct: 177 CTVIGGGE 184 >gi|225848300|ref|YP_002728463.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurihydrogenibium azorense Az-Fu1] gi|225644287|gb|ACN99337.1| ribosomal protein L25, Ctc-form [Sulfurihydrogenibium azorense Az-Fu1] Length = 196 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 4/178 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + + A+ R K K + R G IPA +YG + + K + R + NF+ Sbjct: 3 QTIEWKALPRKKGTKSEVKQNRMKGLIPAEVYGKGHPNVSVYIQKKALLSRPH-GNFLIN 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L ++ E I KD Q + + D IH D +V+ G + VPV F+ K+ G+++ Sbjct: 62 LL-VEGDPEPKLCILKDIQYNYLGDEPIHVDLYEVTSGVEFDIEVPVEFVG--KAKGVEK 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG H + + NIP+ I VD+++L IGD +H+ DI PE M+ + + Sbjct: 119 GGIFEAHLHSIIVRTEPKNIPEKIVVDVSNLDIGDVLHVRDITPPEGVKIMTHGDEVL 176 >gi|88608536|ref|YP_506196.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] gi|109893370|sp|Q2GEA0|RL25_NEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600705|gb|ABD46173.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + + R G+ SA +LR++G +PA+IYG + +A+S +D+SK + + ++ Sbjct: 3 VSIECIPRTSFGRNSANVLRRSGFVPAVIYGKERENINVAISVRDVSKHFAVLSG-SGVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L ++ V+PK Y+L PVS +++H DF+ E ++ VP+ F+N KS I+ G Sbjct: 62 ELSCEGKVYKVVPKAYELHPVSSVVLHLDFVFAGEHAS-KFQVPLNFVNSGKSEAIRLGA 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 LN+V V + C A N+P SI VD+ + K+GDSI D+ P+ ++ N +AT+ Sbjct: 121 MLNIVKRTVLVRCTAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATV 180 Query: 185 VA 186 V Sbjct: 181 VG 182 >gi|194336703|ref|YP_002018497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] gi|226736345|sp|B4SAJ4|RL25_PELPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194309180|gb|ACF43880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] Length = 199 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 8/187 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K +A LRKNG +P +IY + I+++ + K ++S + Sbjct: 1 METIVLGVEPR-VIKKKNAEKLRKNGIVPGVIYHKGEETIAISVNELALRKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L ++ KD Q PV+D +IH DF S + + VPV E S G+ Sbjct: 58 HIIDLQFPDGKIKRSFIKDVQFHPVTDRIIHTDFQLFSAEEIIELEVPVAVSGE--SAGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNI 179 ++GGKL ++ H +++ ++PD + VD+ L+IG SIH+++I L M + Sbjct: 116 EKGGKLLIILHALTIKGKPEDMPDHLVVDVTALEIGHSIHVKEIPLDAYTGLQIMDDPDT 175 Query: 180 TIATIVA 186 + T++A Sbjct: 176 PVITVLA 182 >gi|255526076|ref|ZP_05392999.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296187125|ref|ZP_06855523.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255510262|gb|EET86579.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296048319|gb|EFG87755.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 202 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L R+K AR RK+G+IP IIYG + + +++K++ S +L Sbjct: 3 ELELHKRNKNTVHEARKERKSGKIPGIIYGKNINNLMFEIGELELNKKI-SSTGEHGVLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++G E + ++ Q +PV+ +IH D ++ + + VP+ F+ E+ ++GG Sbjct: 62 VELGSEKHSTLIREVQRNPVNHKIIHIDLEEIPKNQAIQTDVPILFMGEDFVS--RKGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + C IP I VD++ L+IGDS + DI L ++ + + LN IA + Sbjct: 120 VQKERTNVKVQCKYEYIPKHIDVDVSKLEIGDSYRVADIELSQEITFIDDLNTLIAFVT 178 >gi|283780445|ref|YP_003371200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] gi|283438898|gb|ADB17340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] Length = 208 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+ RDK+G + R LR G++PA++YG+ + +++++I + Sbjct: 1 MSAE--TLNVTKRDKLGTANNRRLRYTGKVPAVLYGHGEASISLTVASEEIWAAVKHGG- 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L G + + Q D S +IH D ++VS V+ + V + G Sbjct: 58 --KLVNLK-GDVTESALIRAVQWDVWSKEIIHIDLMRVSASEKVSTTIAVELKG--TAAG 112 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +GG L + HE+ +LCPA IP+ + V++N+L +G +IH ++ LP+ ++ ++ Sbjct: 113 LTEGGVLQFITHELEILCPAAEIPEKLIVNVNNLHLGKAIHANEVTLPKDGELVTPGSVV 172 Query: 181 IATIVAPI 188 + + VAP Sbjct: 173 VVSCVAPK 180 >gi|51599037|ref|YP_073225.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia garinii PBi] gi|71153124|sp|Q65ZY8|RL25_BORGA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51573608|gb|AAU07633.1| general stress protein [Borrelia garinii PBi] Length = 182 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRI-LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNDVLHLKIKSNEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFIKDVSENIASKLIYHIDFYEVDRRVELEKYVPIKLIG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + N+ Sbjct: 117 VKEGGILTVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVRLAENDENL 176 Query: 180 TIATI 184 + TI Sbjct: 177 EVVTI 181 >gi|148654602|ref|YP_001274807.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus sp. RS-1] gi|226736358|sp|A5UQF4|RL25_ROSS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148566712|gb|ABQ88857.1| LSU ribosomal protein L25P [Roseiflexus sp. RS-1] Length = 218 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 8/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K LS R +GK + LR++G +PA +YG +P + + A+ +Y + Sbjct: 1 MSEK-FTLSLEPRSVLGKK-VKRLRRSGILPATVYGKGIEPIAVQIDARSFQ-AIYRQAG 57 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+++ L I + Q PV+ +IHADF V V V VP+ E KSP Sbjct: 58 RTSLIELHIAGHPPLAAFIHALQRHPVTRDIIHADFRAVDLRQEVEVAVPLHI--EGKSP 115 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQL 177 ++ G LN V + + IP ITVD++ L SIH D+ LP + ++ Sbjct: 116 LVESGEAVLNQVLSTIEIRALPTAIPAHITVDISALDSFDKSIHARDLMLPPGVTLVTPG 175 Query: 178 NITIATIV 185 + + Sbjct: 176 EELVVGLA 183 >gi|46447228|ref|YP_008593.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Protochlamydia amoebophila UWE25] gi|71153157|sp|Q6MAT1|RL25_PARUW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46400869|emb|CAF24318.1| putative general stress protein ctc [Candidatus Protochlamydia amoebophila UWE25] Length = 184 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 4/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS---KRLYSKNFMTTI 64 + A++R K LR+ G IPA++Y + + +A+++ + + + + S + TTI Sbjct: 1 MKAILRTGKSKSEINRLRREGMIPAVLYVRGKEGETLAINSAEFNSYLRHVKSGHLPTTI 60 Query: 65 LTL-DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 TL D V+ KD Q + ++H DF ++ + + V VP+ G+K Sbjct: 61 FTLVDEKGSERRVLVKDIQYAITTYQVMHLDFEELIDDHKINVKVPIECTGTVDCVGVKL 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V + C ++P +D+ +L + S ++D+ +PE + +N +A Sbjct: 121 GGVLRQVIRHARIRCLPKDMPSFFELDVQELGLKQSKRLKDMNIPETVRPLIDMNEVVAV 180 Query: 184 IV 185 IV Sbjct: 181 IV 182 >gi|283455970|ref|YP_003360534.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] gi|283102604|gb|ADB09710.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] Length = 198 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 9/181 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R + GKG+AR LR IPA +Y P + L K+ + L N + Sbjct: 4 TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN---AL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ G++ I KD Q +PV I+ H DF +V G + V VPV K + Sbjct: 61 FTIKYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAF- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V E+ + N+P+ I V+++ L G + +D+ LPE + ++ T Sbjct: 120 ----VDIQELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEESVVT 175 Query: 184 I 184 + Sbjct: 176 V 176 >gi|187251696|ref|YP_001876178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] gi|254801048|sp|B2KE95|RL25_ELUMP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186971856|gb|ACC98841.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] Length = 219 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 4/187 (2%) Query: 3 QKECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +E K++ +R+K G KG +R ++PA+IYG +P ++++ KD+ L K Sbjct: 1 MEEIKVNVELREKAGVKGVLSAIRAEKKVPAVIYGGQKEPISVSITEKDLKAIL--KAGS 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++TL I K+ Q V D H DF ++S + V VP++ E+ I Sbjct: 59 NSVVTLSTPAGKETAIIKEVQYHVVKDTPNHVDFQRISLKEKIDVVVPLKLTGESADVKI 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G +N V EV++ IP I VD++ L I +IH+ D+ L + + I Sbjct: 119 -YGALINQVLREVAIRALPTAIPHEIAVDISALTIHKAIHISDLSLSKDIEVLGDPERAI 177 Query: 182 ATIVAPI 188 ++ P Sbjct: 178 VHLMVPR 184 >gi|78187201|ref|YP_375244.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium luteolum DSM 273] gi|109893376|sp|Q3B380|RL25_PELLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78167103|gb|ABB24201.1| LSU ribosomal protein L25P [Chlorobium luteolum DSM 273] Length = 202 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 8/187 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R+ + K +A LRK G++PA++Y ++++ ++K ++S + Sbjct: 1 METIVLGVAPRE-IKKNAAGKLRKTGEVPAVVYHKGEATIAVSVNEIALNKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + KD Q DPV+D +IH DF VS + + VPV E + G+ Sbjct: 58 HIIDLKFPDGNVKRSFIKDVQFDPVTDRVIHTDFQLVSANEVIEMDVPVAV--EGDAIGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNI 179 ++GGKL ++ H +++ ++P +T+D+ L+IG SIH+ +I M + Sbjct: 116 EKGGKLQIIRHSLTVKGKPGDMPAHVTIDVTALEIGHSIHVREIPATAFPGLEIMDDRDT 175 Query: 180 TIATIVA 186 + T++A Sbjct: 176 PVVTVLA 182 >gi|225621394|ref|YP_002722653.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] gi|225216215|gb|ACN84949.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] Length = 196 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K R LR G A +YG + IA+ K+ K ++S Sbjct: 1 MS-ENYTIKALQRDTKFKSVGRKLRNEGYALATLYGRENQ-YSIAVELKEFVK-VFSLAG 57 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+TLDI + V+ KDYQ+D + I+ H DF ++ + +VP+ E Sbjct: 58 QHDIITLDIQNDKTREVLVKDYQIDGIKRIIRHIDFYEIDRNKKIKTYVPIHI--EGTPE 115 Query: 120 GIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG L V + +++ +IP + VD+++LK+GDS+H+ DI+ PE + + Sbjct: 116 GVRLGGGTLEQVEYGLNIKAFPGSIPRELVVDVSELKVGDSLHISDIKFPEGVDPVGDAS 175 Query: 179 ITIATIV 185 I T+V Sbjct: 176 KAIVTVV 182 >gi|189218769|ref|YP_001939410.1| ribosomal protein L25 [Methylacidiphilum infernorum V4] gi|189185627|gb|ACD82812.1| Ribosomal protein L25 [Methylacidiphilum infernorum V4] Length = 219 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 9/196 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q L A +R VGK + + LR IPAI+YG + P+ +SA + + K Sbjct: 1 MAQ-PITLRASIRKAVGKSAVKKLRSKDNIPAILYGKKT-LLPLEISATEFKNLFHGKRV 58 Query: 61 MTTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 +L L+I K+ ++ QL P++D L+H D ++S V + + F+ E Sbjct: 59 EKVLLNLEIAADQEKKSTLAFLQEIQLHPITDKLLHLDLHELSADEKVHAEIDLVFLGEP 118 Query: 117 KSPGIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +S +K G L++ + + C ++PDSI V++ LK G+SIH+ DI LP SM+ Sbjct: 119 QS--LKSGTANLDISLRRLKISCFPKDLPDSIQVEIGHLKTGESIHVGDIPLPPGVESMN 176 Query: 176 QLNITIATIVAPISGS 191 N + ++VA G Sbjct: 177 PKNQVVLSLVAAKGGE 192 >gi|145295097|ref|YP_001137918.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum R] gi|166223676|sp|A4QCR9|RL25_CORGB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|140845017|dbj|BAF54016.1| hypothetical protein [Corynebacterium glutamicum R] Length = 202 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 7/185 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMT 62 K + A +R + GKGSAR R GQIPA++YG + + + + + + + Sbjct: 3 KYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTVDHRTFAALVRQEGV-N 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + + K + ++ + H D L + G V V VPV E +PG Sbjct: 62 AVLELDIEGQKHLTMIKHIDQNVLTFNIDHLDLLAIKRGEKVEVDVPVIVEGEP-APGTM 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + +IP+ V + L+ G + DI L T+ + I Sbjct: 121 W----VQDADTIKVEADVLSIPEEFKVSIEGLEFGAQVTAADIELDGDTTLVEDPETLIV 176 Query: 183 TIVAP 187 IV P Sbjct: 177 NIVYP 181 >gi|159027424|emb|CAO89389.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 185 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 5/168 (2%) Query: 22 RLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK--ELVHVIP 78 R LR+ G IPA++YG+ ++ + + K L + T++ +++ + + Sbjct: 17 RALRRQGLIPAVLYGHNGTESVSLVVGEKAALTLLKKASVNNTLVDVNVPEMPWTGKALL 76 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 ++ Q P L H F VS + + VP++ I E + G KQGG + +EV++ C Sbjct: 77 QEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAIGE--AIGTKQGGLIEQFVNEVNVSC 134 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 A+NIP+ I D++ + +G S+ + D+++PE + + T+ IVA Sbjct: 135 IADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTLKDDPHTTVFAIVA 182 >gi|237785153|ref|YP_002905858.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium kroppenstedtii DSM 44385] gi|237758065|gb|ACR17315.1| 50S ribosomal protein L25 [Corynebacterium kroppenstedtii DSM 44385] Length = 218 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M L A+ R + GKG++R LR+ G+IPA+IYG D P I++ + + L + + Sbjct: 1 MATNITDLEALPRHEFGKGASRRLRRAGRIPAVIYGKELDAPIHISVDSIEFHAVLRN-H 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+ L++ E + K + ++ HAD L + G V V + Sbjct: 60 GANAIVDLNVDGEKHLTMVKAVDQNVLTLDADHADLLAIRRGEKVEVE-----VPVVTEG 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + G L + + +IP+ IT+D+ L++G I D+++P T+ +S Sbjct: 115 EVAPGAMLMQDVDVIDVEADVLSIPEEITIDVEGLEVGTQITAGDVQMPANTTLISDPET 174 Query: 180 TIATIVAP 187 I +V P Sbjct: 175 LIVNVVVP 182 >gi|225850827|ref|YP_002731061.1| 50S ribosomal protein L25/general stress protein Ctc [Persephonella marina EX-H1] gi|225645558|gb|ACO03744.1| ribosomal protein L25, Ctc-form [Persephonella marina EX-H1] Length = 199 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 8/184 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + + A+ R K + RK G IP +YG + + K L + Sbjct: 3 QRIEWQAIPRTVGKKSEVKSFRKKGYIPVEVYGKGRENAHAYI----YWKLLADRPKGMF 58 Query: 64 ILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L I E I KD Q + + D IH D +V+ G + V VPV + K G+ Sbjct: 59 LIDLKIEGEKEPRVCILKDIQYNYLGDQPIHIDLYEVTFGVELDVDVPVELVG--KPKGL 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG L H +++ IPD I VD++DL +GD +H+ DI PE M + I Sbjct: 117 EVGGVLEQHLHTITIRTVPRKIPDRIEVDVSDLDVGDVLHVRDITPPEGVRIMENPDEVI 176 Query: 182 ATIV 185 A ++ Sbjct: 177 AVVI 180 >gi|325849223|ref|ZP_08170674.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480223|gb|EGC83290.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 214 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L + R+ VGK LR+ +P ++YG + + +++D K L S+ +TI Sbjct: 3 DIVLKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKVL-SQAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD+ E V V+ KDYQ+ P H DF ++ + V VPV + + Sbjct: 62 IDLDLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIR--VEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIA 182 L V + C IP V + +++IGD+ + D+ + E + + + + + Sbjct: 120 SVLVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFIVADLDIAKDENINILLEDDEVVC 179 Query: 183 TIVAP 187 ++ P Sbjct: 180 SLQEP 184 >gi|283955211|ref|ZP_06372712.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] gi|283793248|gb|EFC32016.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] Length = 178 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKK--TTLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D + VPV+ + G+K G L Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKDVISKYMVPVKITG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ + DI +P+ + + + + + Sbjct: 118 IQSKRRLKVKCTAENLPNFFELDVSKLDVGDALLVRDIVVPKGVTMIDADRVAVVGV 174 >gi|255971277|ref|ZP_05421863.1| ribosomal protein L25 [Enterococcus faecalis T1] gi|255962295|gb|EET94771.1| ribosomal protein L25 [Enterococcus faecalis T1] Length = 202 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ + T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGVNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I E S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + + + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIAHLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|305682167|ref|ZP_07404971.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] gi|305658640|gb|EFM48143.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] Length = 204 Score = 163 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTT 63 E ++A R + GKG AR LR G++P +IY + D P A S DI L + Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLDTPIHFAASRIDI-HALLRNHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGEPTP----- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L V + +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 118 GTMLVQDSDTVLVEADVLSIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|188575471|ref|YP_001912400.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519923|gb|ACD57868.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 179 Score = 163 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 6/156 (3%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 +YG +P I L+ + I ++ F ++IL L++ ++ V+ +D Q P +++H Sbjct: 1 MYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGDVQQVLLRDIQRHPFKQLIMHI 60 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLN 152 DF +VS ++ VP+ FINE SP K + +EV ++C ++P+ I VDL Sbjct: 61 DFQRVSANQKLSAAVPLHFINEEASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLG 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMS-----QLNITIAT 183 L++G+ IH+ +I+LP + ++ + Sbjct: 121 ALEVGNVIHLSEIKLPAGVEIPELKLGKERDVAVVA 156 >gi|288817436|ref|YP_003431783.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|288786835|dbj|BAI68582.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|308751043|gb|ADO44526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobacter thermophilus TK-6] Length = 192 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L + R+ K + +R+ G IP +YG + + +S KD+ + T Sbjct: 1 MRKVSLKLIPRELGKKSEIKRMRREGYIPVEVYGKDVENRHAYVSLKDLMSL---PHGET 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ D+ E + KD Q+ + D +H D +S + + VP+ F+ G+ Sbjct: 58 FLIEADVDGEKRVCLLKDIQVGYLGDDPVHVDLYDISHTKEIEIEVPLEFVG--TPAGVG 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG V+ H +++ ++IPD ITVD++ + +GD +H+ DI P M IA Sbjct: 116 LGGTFEVMMHTLTVKASVDSIPDKITVDVSAMNVGDVLHVRDITPPSGCVIMDSPEEVIA 175 Query: 183 TIV 185 ++ Sbjct: 176 VVL 178 >gi|320450996|ref|YP_004203092.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] gi|320151165|gb|ADW22543.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] Length = 206 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ K +A LR+ G++P +IY + + + + K + + Sbjct: 2 EYRLKAQYREGE-KPAA--LRRAGKLPGVIYNKHL-NRKVYVELGEFDKVFRQASIH-HV 56 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L++ + + + + LD H DF +S V +++P+RF+ G+++ Sbjct: 57 IVLELPDGQELPTLVRQVNLDKRRRRPEHVDFYVLS-DEPVEMYIPLRFVG--TPQGVRE 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA Sbjct: 114 GGVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAISPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|294101746|ref|YP_003553604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] gi|293616726|gb|ADE56880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] Length = 217 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 93/185 (50%), Gaps = 2/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 K+ R++ GK + + LR G +PA+ YG D + + A DI+ + S ++ T Sbjct: 5 VKIVLEERNEKGKQAVKKLRPTGYVPAVFYGPEYRDAVTVKVKASDIAAVIRSGHWETVR 64 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + ++ Q + +++ +IH DF+Q+ +G + V++PV G+K Sbjct: 65 FNASLPNGREEMCLMRNIQRNLLNNEIIHIDFIQLLKGHKIAVNIPVVLEGREDCVGLKH 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + +EV + IP+S+++D++ L +G+ ++D+ LP+ + L + T Sbjct: 125 GGIIEQLLYEVEIEVLPTEIPNSVSIDVSGLNVGEGFSVKDLALPKSADILVDLEELVVT 184 Query: 184 IVAPI 188 + P Sbjct: 185 VAQPK 189 >gi|268678853|ref|YP_003303284.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] gi|268616884|gb|ACZ11249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] Length = 178 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR++G + A IYG A A + K SK+ + I + Sbjct: 2 LEGIIRDSIEKKATKALRRDGYLIANIYGKGEQNINAAFKANEFIKAAKSKD--SLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + +V+ +DYQ DPV+ L+H D G VPV+ + G K G L Sbjct: 60 KVAGTEYNVVIQDYQRDPVNSNLLHVDLRIALPGVLTKYLVPVKTVG--IPKGTKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C A N+P+ TVD+++L +G++I + DI++P M + ++IA ++ Sbjct: 118 IQSKKRLAVKCTAENLPNDFTVDVSELDVGETILVRDIQVPANVKIMDETRVSIAGVI 175 >gi|311898015|dbj|BAJ30423.1| putative ribosomal protein L25 [Kitasatospora setae KM-6054] Length = 200 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+A R + GKG+AR R+ G +P ++YG+ P + L D+ L + N Sbjct: 1 MSEIRLAAESRTEFGKGAARRARRAGFVPGVVYGHGHAPVHLNLPGHDLMMALKTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L + I + V+PK Q + + + H D L V G VTV +PV E +PG Sbjct: 58 ALLVVPIEGKDEFVLPKAVQREAIKRTIEHVDLLLVKRGEKVTVEIPVHTEGE-LAPG-- 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + V + + + A ++P+S+TV + L+ G +I DI LP S + + + Sbjct: 115 -GNLIENVLNALPIEAEATHLPESVTVSVEGLEAGAAITAGDIALPSGVSLAVEADAVVL 173 Query: 183 TIVA 186 ++ Sbjct: 174 QVIG 177 >gi|254424497|ref|ZP_05038215.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] gi|196191986|gb|EDX86950.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] Length = 216 Score = 163 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 101/174 (58%), Gaps = 6/174 (3%) Query: 22 RLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK--ELVHVIP 78 + LR+ G +PA++YG+ ++ P+ LS D L + +++T+++ VI Sbjct: 17 KRLRREGTLPAVLYGHDGANSLPLKLSNYDAEALLRKASVNKSVITVNVPDVPWSGKVIL 76 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLL 137 ++ Q P + L H F ++ S + V +P+ F+ + G+ +GG L+ V E+ L Sbjct: 77 REVQKHPWKNKLHHLSFFSIASQSEIEVSMPINFVG--DAVGVTDEGGTLDTVMTEIQLK 134 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISGS 191 CP + IP S+ VD+++LKIGD++H+ +I+LP+ TS + ++ + +++AP + + Sbjct: 135 CPPDAIPQSLDVDVSELKIGDALHVGEIKLPKGTSVTVEPSLLVVSVLAPRTAA 188 >gi|256545294|ref|ZP_05472658.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] gi|256398975|gb|EEU12588.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] Length = 215 Score = 163 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L++ R+ VGK LR+ +P ++Y + + +++D K L S+ TTI Sbjct: 3 DIVLNSEKREAVGKNKVNKLRQQAIVPGVVYAKDKENINVQFTSRDFEKVL-SQAGTTTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E V V+ KDYQ+ P H DF ++ + V VPV + + Sbjct: 62 IDLDIDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLNGRDDIR--VEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHME--DIRLPEKTSSMSQLNITIA 182 L V + C IP +++ D++IGDS + DI E + + + + + Sbjct: 120 SVLVQNIDSVEVECLPMYIPQYAELEVTDMQIGDSFTVADFDIAKDENINILLEEDEVVC 179 Query: 183 TIVAP 187 ++ P Sbjct: 180 SLQEP 184 >gi|167463174|ref|ZP_02328263.1| ribosomal protein L25 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381193|ref|ZP_08055196.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154769|gb|EFX47040.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 199 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 5/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+K +G LRK G+IPAI+YG P+AL K + L + ++ Sbjct: 3 IMLQGTTRNKGTRGELNKLRKEGKIPAIVYGKTLVSSPLALEKKHVLALLKTH--PNAVI 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI V+ Q DP++ ++H D Q++ V V + F E +K+G Sbjct: 61 DLDIPEVGKRPVMISQVQRDPINGDVVHLDLHQINLDEPVRTAVALEFTGEPAD--VKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + E+ + C + +P+ + VD++ L + ++ + DI +P+ ++ N + TI Sbjct: 119 GILQIQTAELEVRCLPDRLPEQLKVDISKLGVNQNLLVSDIEVPQGVEVVTDGNEVLITI 178 Query: 185 VAP 187 + P Sbjct: 179 LVP 181 >gi|283955736|ref|ZP_06373227.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] gi|283792691|gb|EFC31469.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] Length = 178 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKK--TTLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGV 174 >gi|315636066|ref|ZP_07891323.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] gi|315479635|gb|EFU70311.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] Length = 178 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L +K + + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLRNKETLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + + G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVG--TAKGLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + N+P+ I +D+ +L GD+I + DI+ PE + + ++ Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFPENVDCYLDPRVPVVGVI 175 >gi|225023009|ref|ZP_03712201.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] gi|224944232|gb|EEG25441.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] Length = 203 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTT 63 E ++A R + GKG AR LR G++P +IY + D P A S DI L + Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLDTPIHFAASRIDI-HALLRNHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGEPTP----- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L V + +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 118 GTMLVQDSDTVLVEADVLSIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|218129918|ref|ZP_03458722.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|317476861|ref|ZP_07936104.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] gi|217988028|gb|EEC54353.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|316907036|gb|EFV28747.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] Length = 197 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVRALYNAIPERLVVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|166364701|ref|YP_001656974.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] gi|189042362|sp|B0JXF5|RL25_MICAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166087074|dbj|BAG01782.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] Length = 185 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 5/168 (2%) Query: 22 RLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK--ELVHVIP 78 R LR+ G IPA++YG+ ++ + + K L + T++ +++ + + Sbjct: 17 RALRRQGLIPAVLYGHNGTESISLVVGEKAALTLLKKASVNNTLVDVNVPEMPWTGKALI 76 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 ++ Q P L H F VS + + VP++ I E + G KQGG + +EV++ C Sbjct: 77 QEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAIGE--AIGTKQGGLIEQFVNEVNVSC 134 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 A+NIP+ I D++++ +G S+ + D+++PE + + T+ IVA Sbjct: 135 IADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTLKDDPHTTVFAIVA 182 >gi|167762594|ref|ZP_02434721.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] gi|167699700|gb|EDS16279.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] Length = 197 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDETKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNAIPEKLIVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|257867045|ref|ZP_05646698.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257873380|ref|ZP_05653033.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] gi|257801101|gb|EEV30031.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257807544|gb|EEV36366.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ + + V+ + K+YQ D + L H +FL V V V I E S G+K G Sbjct: 61 ITISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|57237362|ref|YP_178375.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni RM1221] gi|86149073|ref|ZP_01067305.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151425|ref|ZP_01069640.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153932|ref|ZP_01072135.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597453|ref|ZP_01100688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|153950943|ref|YP_001398644.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. doylei 269.97] gi|157414608|ref|YP_001481864.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81116] gi|205356039|ref|ZP_03222807.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218561970|ref|YP_002343749.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315123880|ref|YP_004065884.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|68053031|sp|Q5HWG0|RL25_CAMJR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153129|sp|Q9PII8|RL25_CAMJE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223672|sp|A7H564|RL25_CAMJD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|172047037|sp|A8FKA0|RL25_CAMJ8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57166166|gb|AAW34945.1| ribosomal protein L25 [Campylobacter jejuni RM1221] gi|85840431|gb|EAQ57688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841772|gb|EAQ59019.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|85842893|gb|EAQ60105.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190514|gb|EAQ94488.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359676|emb|CAL34462.1| putative 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|152938389|gb|ABS43130.1| ribosomal protein L25 [Campylobacter jejuni subsp. doylei 269.97] gi|157385572|gb|ABV51887.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81116] gi|205346163|gb|EDZ32798.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284925583|gb|ADC27935.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni IA3902] gi|307747248|gb|ADN90518.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni M1] gi|315017602|gb|ADT65695.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057732|gb|ADT72061.1| LSU ribosomal protein L25p [Campylobacter jejuni subsp. jejuni S3] gi|315928388|gb|EFV07702.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930528|gb|EFV09571.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 305] gi|315931612|gb|EFV10578.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 327] Length = 178 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKK--TTLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGV 174 >gi|257877122|ref|ZP_05656775.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] gi|257811288|gb|EEV40108.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ + + V+ + K+YQ D + L H +FL V V V I E S G+K G Sbjct: 61 ITISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|212550489|ref|YP_002308806.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226736279|sp|B6YQC3|RL25_AZOPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212548727|dbj|BAG83395.1| 50S ribosomal protein L25 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 189 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 93/182 (51%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L RD +GK + + RK IP ++YG + + +++ K +Y+ + Sbjct: 1 MKTFQLKGFRRDFLGKKAVKAYRKESLIPCVLYGGNENVIHFNVFRENLRKLVYTPDVF- 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L I ++L I K+ Q PV+D ++H DFL++ + V + +PV E + GIK Sbjct: 60 -IVNLCIEEKLYLSILKEIQFHPVNDEILHVDFLRIFKNKPVIIEIPVVL--EGLAEGIK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + + P+ + +++ +L++G +I + + + ++ + +A Sbjct: 117 AGGKLCSEMRKLKVKGFYKDFPERLVINVENLELGKTIQVGKLSF-DNLELLNAKDNVVA 175 Query: 183 TI 184 ++ Sbjct: 176 SV 177 >gi|168186990|ref|ZP_02621625.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169295085|gb|EDS77218.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 194 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M Q ++ R+K A +R+NGQ+P I+YG ++ PI ++ ++ K L KN Sbjct: 1 MSQAAIAIN--EREKTDT--ANKIRRNGQVPCIMYGEHLEKAIPIKVNYNELMKLLR-KN 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +IL L++ E+ + + K+ Q D +S +IH DF V++ + + +P+ F+ + Sbjct: 56 SKGSILKLELNNEIRNCVIKEIQNDTLSGKIIHVDFQNVNKNEVIKMTIPIDFVGIDNLQ 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K L E+ + IP++I +D + + D I + DI+LPE +S+ + Sbjct: 116 LRKL--ILETFITEIEMQGKVEEIPENIVIDASTMNCDDKIFVRDIKLPEGIRLLSEPDA 173 Query: 180 TIATIVAPISGS 191 +A + + S S Sbjct: 174 LVAVVNSTESTS 185 >gi|257066620|ref|YP_003152876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] gi|256798500|gb|ACV29155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] Length = 217 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A R+ GK LR IP +IY + + ++ +D K L + +TI Sbjct: 3 ELVLQAEKREATGKNKVNKLRAAELIPGVIYAKDEENINVQVTTRDFEKVLR-QAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLD G E V+ K YQ P + +H DF +++ + V VPV + ++ + Sbjct: 62 ITLDFGDEKKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLVGRDEIR--VEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNITIA 182 L V + C IP + V+++DL+IGD + D+ + + + + + + + I Sbjct: 120 SVLVQNIDVVEVECLPKYIPQTADVEVSDLQIGDVRTIADLDIAKVDEITILEEDDEVIC 179 Query: 183 T 183 + Sbjct: 180 S 180 >gi|313886398|ref|ZP_07820120.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332299899|ref|YP_004441820.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] gi|312924144|gb|EFR34931.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332176962|gb|AEE12652.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] Length = 211 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 K KLSA +R D++GK + + LR G +P ++YG S+ + + + A DI+K +Y+ + Sbjct: 1 MKHFKLSATVRKADQLGKKATKGLRSEGLVPVVLYG-GSETQHLIVKADDINKLIYTPDI 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LDI + V + K+ Q PVSD +HAD +VSE + + VPV + G Sbjct: 60 Y--LIELDIEGKQVKAVLKEVQFHPVSDKTLHADLYEVSEDKPIVMSVPVVLDGH--AVG 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GGKL + + + IP+++ +D+ +LK+G +I + ++ E + Sbjct: 116 VRAGGKLVREKRNLRVRAIYDKIPETLVIDVTNLKLGKTIQVHELSF-EGLELVDAPQAV 174 Query: 181 IATI 184 + + Sbjct: 175 VCAV 178 >gi|157163952|ref|YP_001466456.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter concisus 13826] gi|112801679|gb|EAT99023.1| ribosomal protein L25, Ctc-form [Campylobacter concisus 13826] Length = 178 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K + + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ +V+ DYQ D V+ L H D G +PV+ + G+K G L Sbjct: 60 KVGGKVYNVVIVDYQRDVVTSDLKHVDLKVALPGVLSKYMIPVKPVG--TPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + C A N+P+S VD++ L I D+I + DI P+ + + + + ++ Sbjct: 118 IQSKRRLCVKCTAENLPNSFDVDVSKLDIDDTILVRDITAPKGVTIIDADRVAVLGVI 175 >gi|312127690|ref|YP_003992564.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor hydrothermalis 108] gi|311777709|gb|ADQ07195.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor hydrothermalis 108] Length = 200 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDVFTKSNLNRLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|227499767|ref|ZP_03929867.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] gi|227218153|gb|EEI83419.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] Length = 215 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L A R+ GK LR N +P +IY + + ++A+D K L + +TI Sbjct: 3 DIVLQAQKREATGKNKVNKLRANELVPGVIYAKDEENINVQVTARDFEKVLR-QAGTSTI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TLDI E V+ K YQ P + +H DF +++ + V VPV + + + + Sbjct: 62 ITLDIDGENKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLVGRDDI--VVEP 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIA 182 L V + C IP + V++ DL+IGD + D+ + + + + + I Sbjct: 120 SVLVQNIDVVEVECLPKFIPQTAEVEVKDLQIGDVRTIADLDIFKNADITILEEEDAVIC 179 Query: 183 T 183 + Sbjct: 180 S 180 >gi|224538934|ref|ZP_03679473.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] gi|224519452|gb|EEF88557.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] Length = 196 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG S+ +SA + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYG-GSENIHFTVSADGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + ++ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKINAIMKDIQFHPVKDTILHVDFYQIDESKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV++ L +G ++ + ++ E M+ Sbjct: 116 AEGVKAGGKLVLQMRKLKVKALYNIIPEKLTVNVAHLGLGKTVKVGELNF-EGLELMNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|333031443|ref|ZP_08459504.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] gi|332742040|gb|EGJ72522.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] Length = 200 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRD-----KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ + R +R NG +P ++YG + A D+ +Y+ Sbjct: 1 MKTIELKGSAREIAERSSDQTRAIREIRNNGGVPCVLYG-GETNHHFTVKASDLRGLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ +D+ + I +D Q PVSD ++H DF +++E + + + VP++ + Sbjct: 60 PDIH--VVNIDLEGKQFMAILQDIQFHPVSDKILHVDFKEINETNPIVMEVPIKL--QGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL ++ + NIP+ + +D+ L++G +I + ++ E ++ Sbjct: 116 AKGVKAGGKLQSQMRKLKVRALYTNIPERLVIDVTKLELGKTIKVGEVSF-ENLDILNAK 174 Query: 178 NITIATI 184 I + Sbjct: 175 EAVICAV 181 >gi|57242055|ref|ZP_00369995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315638227|ref|ZP_07893409.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] gi|57017247|gb|EAL54028.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315481763|gb|EFU72385.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] Length = 178 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K T I + Sbjct: 2 LEGIIRESIGRKAAKALKRDGYLIANIYGKGLENIHAAFKVNDFIKEVRKK--TTLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGAKTLSVVVVDYQKDPVTSDLKHVDLKVAQKGVVSKYMVPVKVVG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ ++DI +P+ S + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVKDIVVPQGVSIIEADRVAVVGV 174 >gi|189347042|ref|YP_001943571.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium limicola DSM 245] gi|226736294|sp|B3EDG7|RL25_CHLL2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189341189|gb|ACD90592.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium limicola DSM 245] Length = 196 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 8/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRKNG +PA+IY + ++++ ++K ++S + Sbjct: 1 METIALGVEPR-VIRKKEAAKLRKNGIVPAVIYHKGEETVAVSVNEIALNKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + + KD Q DPVSD +IH DF + V + VPV S G+ Sbjct: 58 HIIDLQFPDGKTLRSFIKDVQFDPVSDRIIHTDFQLFAADEVVEMEVPVAISG--DSIGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNI 179 ++GGK+ ++ H +++ N+PD +T+D+ +L +G IH+ +I + S M + Sbjct: 116 EKGGKILILRHALTIQGLPANMPDHVTIDVTNLDMGHIIHVREIPMDAYTGLSIMDEPET 175 Query: 180 TIATIVAPI 188 + +I P Sbjct: 176 PVISIAPPK 184 >gi|57168447|ref|ZP_00367581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|305432866|ref|ZP_07402024.1| 50S ribosomal protein L25 [Campylobacter coli JV20] gi|57020255|gb|EAL56929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|304444020|gb|EFM36675.1| 50S ribosomal protein L25 [Campylobacter coli JV20] Length = 178 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNDFIKEVRKKTTLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKITG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGV 174 >gi|312135063|ref|YP_004002401.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor owensensis OL] gi|311775114|gb|ADQ04601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor owensensis OL] Length = 201 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LR+ G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDVFTKSNLNKLRREGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + KD Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKDVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENTEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMSYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|157736889|ref|YP_001489572.1| 50S ribosomal protein L25/general stress protein Ctc [Arcobacter butzleri RM4018] gi|166987889|sp|A8ESH9|RL25_ARCB4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157698743|gb|ABV66903.1| 50S ribosomal protein L25 [Arcobacter butzleri RM4018] Length = 178 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L +K + + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLRNKETLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + + G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVG--TAKGLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + N+P+ I +D+ +L GD+I + DI+ P + + ++ Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFPANVDCYLDPRVPVVGVI 175 >gi|283853056|ref|ZP_06370312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] gi|283571523|gb|EFC19527.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] Length = 198 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 7/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R +GKG+ R LR +P + Y P+ + + K+LY+K Sbjct: 2 KETHSLAVKTRAGIGKGANRKLRAEDMVPGVYYDATGVNIPVMVEHLPL-KKLYAKTASA 60 Query: 63 TILTL----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L + GKE + + P + H DF V + VH+PV K+ Sbjct: 61 HVFDLLIESENGKETKPALVWKLEHHPTKPRITHVDFYGVDLTKAIRVHIPVEVTG--KA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G +GG + + + + +IPD + +D+ DL + +++ + D+ LPE ++ N Sbjct: 119 KGQVKGGAMVLHRETIEVTSLPLSIPDKVVIDVTDLDLNETVQVADLALPEGVKAVYDDN 178 Query: 179 ITIATIV 185 I I+ Sbjct: 179 YAILGIL 185 >gi|46199527|ref|YP_005194.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB27] gi|55981558|ref|YP_144855.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB8] gi|62287407|sp|Q5SHZ1|RL25_THET8 RecName: Full=50S ribosomal protein L25; Short=TL5 gi|71153670|sp|Q72IA7|RL25_THET2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116668257|pdb|2J01|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668318|pdb|2J03|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|119389755|pdb|2HGJ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. gi|119389812|pdb|2HGQ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. gi|119389868|pdb|2HGU|Y Chain Y, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgr. gi|149240905|pdb|1VSA|T Chain T, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|157836540|pdb|2V47|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836596|pdb|2V49|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|160285447|pdb|1VSP|T Chain T, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156539|pdb|3D5B|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156593|pdb|3D5D|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938876|pdb|2JL6|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938934|pdb|2JL8|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit. gi|218766816|pdb|3F1F|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766872|pdb|3F1H|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887455|pdb|2WDI|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887487|pdb|2WDJ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887544|pdb|2WDL|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887601|pdb|2WDN|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823587|pdb|2WH2|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823646|pdb|2WH4|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100031|pdb|3HUX|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100087|pdb|3HUZ|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824545|pdb|2WRJ|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824607|pdb|2WRL|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824666|pdb|2WRO|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824725|pdb|2WRR|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307213|pdb|3KIR|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307271|pdb|3KIT|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307329|pdb|3KIW|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307387|pdb|3KIY|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965650|pdb|3KNI|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965682|pdb|3KNK|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965714|pdb|3KNM|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965746|pdb|3KNO|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979494|pdb|3I8F|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979578|pdb|3I8I|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979632|pdb|3I9C|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979686|pdb|3I9E|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982133|pdb|2X9S|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982192|pdb|2X9U|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|300508650|pdb|3MRZ|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508705|pdb|3MS1|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307568019|pdb|2XG0|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568077|pdb|2XG2|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|309320306|pdb|3OH5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320336|pdb|3OH7|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320408|pdb|3OHJ|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320438|pdb|3OHK|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320489|pdb|3OHZ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320540|pdb|3OI1|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320591|pdb|3OI3|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320642|pdb|3OI5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207731|pdb|2XQE|Z Chain Z, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754055|pdb|2XTG|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754113|pdb|2XUX|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533460|pdb|2Y0V|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533519|pdb|2Y0X|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533578|pdb|2Y0Z|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533637|pdb|2Y11|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533696|pdb|2Y13|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533755|pdb|2Y15|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533814|pdb|2Y17|Z Chain Z, Ef-Tu Complex 3 gi|325533873|pdb|2Y19|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|46197153|gb|AAS81567.1| LSU ribosomal protein L25P [Thermus thermophilus HB27] gi|55772971|dbj|BAD71412.1| 50S ribosomal protein L25 (TL5) [Thermus thermophilus HB8] Length = 206 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR+ G++P ++Y + + + + K + + Sbjct: 2 EYRLKAYYREGEKPSA---LRRAGKLPGVMYNRHL-NRKVYVDLVEFDKVFRQASIH-HV 56 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L++ + + + + LD H DF +S V ++VP+RF+ G++ Sbjct: 57 IVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVG--TPAGVRA 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA Sbjct: 114 GGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|152990133|ref|YP_001355855.1| 50S ribosomal protein L25/general stress protein Ctc [Nitratiruptor sp. SB155-2] gi|166223697|sp|A6Q1Y9|RL25_NITSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151421994|dbj|BAF69498.1| 50S ribosomal protein L25 [Nitratiruptor sp. SB155-2] Length = 178 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 4/170 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ GK + + LR++G + A IYG A D + + K + + Sbjct: 2 LEGIVRESTGKKATKALRRDGYLIANIYGKDFPNIHAAFKKGDFIRTVRHKEKLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ ++YQ DPV+ L+H D + G VP++ + G+K G L Sbjct: 60 KVGDKELEVVVQEYQKDPVTYDLLHVDLMVAQPGVVTYYMVPIKTVG--TPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + + NIPDSIT+D+++L +GD+I + DI LPE M+ Sbjct: 118 VTSKRRIKVKGAIENIPDSITLDVSNLDVGDAILIRDIELPEGVEHMTAP 167 >gi|332687114|ref|YP_004456888.1| 50S ribosomal protein L25p [Melissococcus plutonius ATCC 35311] gi|332371123|dbj|BAK22079.1| LSU ribosomal protein L25p [Melissococcus plutonius ATCC 35311] Length = 209 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 3/186 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+ R + LR+ G++PAI+YG+ PI K++ L++ N + Sbjct: 2 SVSLAVKERAVRPRSIRNQLRRKGKVPAIVYGHEIKSIPIFFDEKELLYILHN-NGSNVV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ I + ++ + + QLD + + HA+FL V+ V V E + G+K G Sbjct: 61 ITMTINNKKINTLLTNTQLDTFNKQMRHAEFLSVNMNEATEVETDVVLTGE--ASGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + + +P++I VD+++L IG++I + D+ ++ + IA++ Sbjct: 119 GILTQNLYTILVSTTPEQLPENIEVDISNLGIGEAITVGDLPKNPTYELVTSPDEQIASV 178 Query: 185 VAPISG 190 + Sbjct: 179 AEATTA 184 >gi|255321864|ref|ZP_05363014.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] gi|255300968|gb|EET80235.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] Length = 178 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ +YQ DPV++ L H D G +PV+ G+K G L Sbjct: 60 KVGGKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPVKPYG--TPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V +++ C A N+P+S +D++ L I D++ + DI +P + + + + ++ Sbjct: 118 IVSKRRLAVKCTAENLPNSFDIDVSGLDIDDTVLVRDITVPAGVTMIDADRVAVLGVI 175 >gi|189467496|ref|ZP_03016281.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] gi|189435760|gb|EDV04745.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] Length = 196 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENIHFTVPADGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + ++ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKINAIMKDIQFHPVKDTILHVDFYQIDESKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +T+++ L +G ++ + ++ E M+ Sbjct: 116 AEGVKAGGKLVLQMRKLKVKALYNVIPEKLTINVAHLGLGKTVKVGELSF-EGLELMNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|302534901|ref|ZP_07287243.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] gi|302443796|gb|EFL15612.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] Length = 196 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KLSA +RD GKGSAR R++ P +IYG+ + PK + + A + L + N Sbjct: 1 MNMSEIKLSAKLRDSFGKGSARQSRRDALTPGVIYGHGTTPKHVGVEAHALMMALKTPN- 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L+LDI + VI K Q P+ ++H DFL V +G VTV VPV + + Sbjct: 60 --ALLSLDIEGDGTELVISKAVQRHPLKRNILHVDFLIVQKGEKVTVEVPVVTEG-DLAA 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G G L + +++ A +IP +TV + L+ G SIH +D+ LP T+ Sbjct: 117 G---GNLLETLLTTITVEAEATHIPTEVTVSIEGLEAGASIHAKDLVLPAGTTLAVDGET 173 Query: 180 TIATIV 185 + +V Sbjct: 174 AVLQVV 179 >gi|224510801|pdb|3FIN|Z Chain Z, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 50s Subunit Length = 177 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 9/183 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R+ + LR+ G++P ++Y + + + + K + ++ Sbjct: 1 YRLKAYYREGEKPSA---LRRAGKLPGVMYNRHL-NRKVYVDLVEFDKVFRQASIH-HVI 55 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++ + + + + LD H DF +S V ++VP+RF+ G++ G Sbjct: 56 VLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVG--TPAGVRAG 112 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 113 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 172 Query: 185 VAP 187 V P Sbjct: 173 VPP 175 >gi|29349997|ref|NP_813500.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides thetaiotaomicron VPI-5482] gi|253572757|ref|ZP_04850157.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298384351|ref|ZP_06993911.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] gi|71153118|sp|Q89YZ1|RL25_BACTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29341908|gb|AAO79694.1| putative 50S ribosomal protein L25 [Bacteroides thetaiotaomicron VPI-5482] gi|251837657|gb|EES65748.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298262630|gb|EFI05494.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] Length = 196 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGAG-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LDI + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLDIDGKKVNAILKDIQFHPVKDNILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|145219519|ref|YP_001130228.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris vibrioformis DSM 265] gi|189042365|sp|A4SE17|RL25_PROVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145205683|gb|ABP36726.1| LSU ribosomal protein L25P [Chlorobium phaeovibrioides DSM 265] Length = 203 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 8/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A +RK+G +PA++Y + ++++ +++K +++ + Sbjct: 1 METTVLGVQPR-IIKKNDAEKIRKSGNVPAVVYHKGEETVAVSVNELELNKLVHTAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L ++ K Q PV+D +IH DF + + + VPV E S G+ Sbjct: 58 HIIDLRFPDGKVKRSFIKAVQFHPVTDRIIHTDFQLFAADEVIEMDVPVSVTGE--SVGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNI 179 +GGKL ++ H ++L ++PD + +D+ D++IG +H++DI E M Sbjct: 116 DKGGKLQILRHNLTLKGKPTDMPDHLVIDITDMEIGSIVHVKDIPAQSYENLEIMIDPET 175 Query: 180 TIATIVAPI 188 + ++VAP Sbjct: 176 PVVSVVAPK 184 >gi|146296817|ref|YP_001180588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166223670|sp|A4XKG2|RL25_CALS8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145410393|gb|ABP67397.1| LSU ribosomal protein L25P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 203 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L R+ K + LRK G IPA+ YG+ P +S K+ K LY + + Sbjct: 2 EPVLVYNKRETFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYKQKGLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q V +IH DF +SE + V VP+ F N +G Sbjct: 61 IKILIDGKERTALIKEVQTHYVKGNIIHVDFQILSENKPIYVEVPIVFENAEILK--SRG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + + +I + DI+LPE L+ +A I Sbjct: 119 LVLQRQIDTVEIEGLPKDIPEHLVIDLMEYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|222824358|ref|YP_002575932.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] gi|254801040|sp|B9KDP2|RL25_CAMLR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222539579|gb|ACM64680.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] Length = 178 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K + + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKINEFIKEVRKKTTLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++++V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGGKVLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIVG--TAMGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D+ L +GD++ + D+ +PE + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNYFELDVTKLDVGDALLVRDVVVPEGVTMVDADRVAVVGV 174 >gi|257459024|ref|ZP_05624143.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] gi|257443409|gb|EEV18533.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] Length = 178 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD +GK +++ L+++G + A IY D A D K + +K + + Sbjct: 2 LEGIVRDSIGKRASKSLKRDGYLIANIYAKGFDNINAAFKVNDFIKAMRAKEDL--PFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + VI ++YQ PV++ L H D V + VPV+ + G+K G L Sbjct: 60 SVGGKTYRVIVQEYQKHPVTNTLTHVDLRVVQDDVVSKYLVPVKVTG--VAKGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C ++P+ T+D++DL +GDS+ + DI + E S + ++ + + Sbjct: 118 VQSKRRIAVKCAGKDLPNDFTLDVSDLDVGDSLLIRDIPVKEGVSIILDGSVAVVGVT 175 >gi|302871951|ref|YP_003840587.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] gi|302574810|gb|ADL42601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] Length = 200 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|325568384|ref|ZP_08144751.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] gi|325158153|gb|EGC70306.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] Length = 204 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + V+ + K+YQ D + L H +FL V V V I E S G+K G Sbjct: 61 IMISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLIGE--SAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|312793426|ref|YP_004026349.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180566|gb|ADQ40736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 198 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|154174063|ref|YP_001408881.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter curvus 525.92] gi|112803724|gb|EAU01068.1| ribosomal protein L25, Ctc-form [Campylobacter curvus 525.92] Length = 178 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K + + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKETLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ +V+ DYQ D V++ L H D G +PV I G+K G L Sbjct: 60 KVGGKVYNVVIVDYQRDVVTNDLKHVDLKVALPGVLSKYMIPVNPIG--TPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + C A N+P+S +D++ L + D+I + DI P S + + + ++ Sbjct: 118 IQSKRRLCVKCTAENLPNSFDIDVSKLDVDDTILVRDITAPAGVSIVDADRVAVLGVI 175 >gi|322812593|pdb|3PYO|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812646|pdb|3PYR|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|322812699|pdb|3PYT|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812752|pdb|3PYV|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome Length = 188 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 9/183 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R+ + LR+ G++P ++Y + + + + K + ++ Sbjct: 1 YRLKAYYREGEKPSA---LRRAGKLPGVMYNRHL-NRKVYVDLVEFDKVFRQASIH-HVI 55 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++ + + + + LD H DF +S V ++VP+RF+ G++ G Sbjct: 56 VLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVG--TPAGVRAG 112 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 113 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 172 Query: 185 VAP 187 V P Sbjct: 173 VPP 175 >gi|256420579|ref|YP_003121232.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] gi|256035487|gb|ACU59031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] Length = 193 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + +R + GK + R R GQ+P +IYG ++ + A +Y+ +F Sbjct: 1 MKTITIEGQLRSEFGKKATRQARSEGQVPCVIYG-GAETVSFSAPAVSFKNLIYTPDF-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + +G ++ + KD Q D V+D L H DFL++ E V V +P+R + + S G+K Sbjct: 58 QLAEIKLGSKVYRCVLKDKQFDTVTDELSHIDFLELVEDKPVAVTLPIRIVGQ--SEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL V + + + ++I V +++L++ +I +ED+ + E ++ I IA Sbjct: 116 AGGKLVVKIKALKVKALPKYLRENIEVSIDNLELNGNIRVEDV-VAENIEILNSPRIPIA 174 Query: 183 TIV 185 ++V Sbjct: 175 SVV 177 >gi|218249528|ref|YP_002375285.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225549827|ref|ZP_03770790.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|226736282|sp|B7J0N2|RL25_BORBZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218164716|gb|ACK74777.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225369584|gb|EEG99034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|312147892|gb|ADQ30551.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi JD1] Length = 182 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|226321217|ref|ZP_03796751.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] gi|226233371|gb|EEH32118.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] Length = 182 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|226321251|ref|ZP_03796779.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] gi|226233283|gb|EEH32034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] Length = 182 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDISHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|148927895|ref|ZP_01811306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] gi|147886757|gb|EDK72316.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] Length = 231 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++ R GK + LR++GQ+P ++YG +P + + K + + Sbjct: 1 MANNDLTITLEKRAVAGKK-VKNLRRDGQVPGVVYGQGFEPISVQAPLVPLQKLVKT-AG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+I + K+ +DPV ++L H F V + VT +PV +SP Sbjct: 59 KHHPVQLNIAGSKKTAMIKEISMDPVKNLLRHVAFHAVRQDEKVTADIPVVLEGLGESPA 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNI 179 + G + + + ++P+++TV + L + G + + D+ +P ++ Sbjct: 119 ERAGLVILTTVESLQVKAFPGDLPNALTVSTSTLSEAGQHLTVADLSIPSGVEIDAEPEQ 178 Query: 180 TIATIVAPIS 189 +A++ P + Sbjct: 179 VLASVYEPSA 188 >gi|329955544|ref|ZP_08296452.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] gi|328525947|gb|EGF52971.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] Length = 197 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + ++++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNAIPEKLIINVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|172040259|ref|YP_001799973.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium urealyticum DSM 7109] gi|226736300|sp|B1VFK0|RL25_CORU7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171851563|emb|CAQ04539.1| 50S ribosomal protein L25 [Corynebacterium urealyticum DSM 7109] Length = 212 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ V+R + GKG++R LR++G+IP ++YGN DP + + D+ + ++ + Sbjct: 5 TRIEGVLRTEFGKGASRRLRRDGRIPLVVYGNELDPVHVHVDTLDLHALVRNEGV-NAVF 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I E V+ K + ++ + HAD L V G V V VPV +PG Sbjct: 64 ELNIDGEDNLVMVKAIDQNVLTLDIDHADLLNVKRGERVEVEVPVIHEGLP-APGAMVVQ 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++V+ EV +L +IP+ I +D+N L+IG+ I +D+++P +S + IV Sbjct: 123 DVDVLLLEVDVL----DIPEEIVLDINGLEIGEQILAKDVKMPSNAVLVSDAEELVINIV 178 >gi|153807759|ref|ZP_01960427.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] gi|149129368|gb|EDM20582.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] Length = 196 Score = 160 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + + + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGGN-EVVHFTVPNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E MS Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELMSAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|34558363|ref|NP_908178.1| 50S ribosomal protein L25/general stress protein Ctc [Wolinella succinogenes DSM 1740] gi|71153675|sp|Q7M7U7|RL25_WOLSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34484082|emb|CAE11078.1| PUTATIVE 50S RIBOSOMAL PROTEIN L25 [Wolinella succinogenes] Length = 178 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K + + LR +G + A IYG + A D + + SK I + Sbjct: 2 LEGIIRESISKSAVKALRNDGYLIANIYGKGQENTHCAFKKNDFIRAVKSK--TNIIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQ DP++ L+H D + V G VPV+ + G+K G L Sbjct: 60 KVGGKEINVVVQEYQKDPITSDLLHVDLMLVQPGVETKFLVPVKTAG--SAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + C N+P S +D++DL +GD+I + D+ + + ++ I ++ Sbjct: 118 ILSKKRVKVKCSPENLPASYELDVSDLDVGDAILVRDLPELPNVKVIEKESVAIVGVI 175 >gi|195953330|ref|YP_002121620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] gi|226736331|sp|B4U931|RL25_HYDS0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|195932942|gb|ACG57642.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] Length = 197 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + + R+ KG + RK G +P IYG + KD++ + T Sbjct: 1 MKRVSIELLEREASTKGDKKSKRKEGLVPVEIYGKGVQNIHAYMRIKDLAAM---PHGTT 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ +G E++ + KD Q + D +H D +S + V VP+ F+ K G++ Sbjct: 58 FLIEAKLGNEVLPCLLKDIQYGWLGDNPVHVDLYNISNVTETDVEVPLEFVGTPK--GVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + H + L NIP+ ITVD++++ +G +H++D+ +P M + Sbjct: 116 LGGTLEIHLHSIELKVDPRNIPEKITVDISNVDLGGVLHVKDLNIPANCRLMEDPEEVVL 175 Query: 183 TIV 185 + Sbjct: 176 VVA 178 >gi|163783324|ref|ZP_02178317.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] gi|159881432|gb|EDP74943.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] Length = 201 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 5/178 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R K + +R+ G IP IYG + +SAKD + T Sbjct: 1 MKRVSVKLSERVPGKKSETKRMRREGFIPVEIYGKGVNNSHAWMSAKDFLSL---PHGET 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ + I KD Q + D IH D ++ + + V VP+ F G++ Sbjct: 58 FLIETEVNGDKRVCILKDIQFGWLGDNPIHVDLYDLANVTEIEVEVPIEFTG--TPAGVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 GG V+ H ++ ++PD I +D++ L +G+++H+ D+ PE + T Sbjct: 116 LGGTFEVLMHSFTVKAKPADLPDKIVIDVSGLGLGEALHVRDVAPPEGCVILDNPEET 173 >gi|121612154|ref|YP_001000021.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|148927012|ref|ZP_01810688.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] gi|167004979|ref|ZP_02270737.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|166223673|sp|A1VY30|RL25_CAMJJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87250228|gb|EAQ73186.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81-176] gi|145844420|gb|EDK21529.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 178 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 4/177 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKK--TTLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ D V+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDSVTAELKHVDLKVAQKGVISKYMVPVKITG--TAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGV 174 >gi|216264210|ref|ZP_03436202.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] gi|215980683|gb|EEC21490.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] Length = 182 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|218295193|ref|ZP_03496029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] gi|218244396|gb|EED10921.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] Length = 205 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ + LR+ G++P ++Y + + + + K + + Sbjct: 2 EYRIKAYYREGEKPQA---LRRAGKLPGVMYNKSL-NRKVYVDLSEFDKVFRQASIH-HV 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ V + + L+ H DF +S V ++VP+RF+ G+++G Sbjct: 57 IVLELPDGEVPTLVRQVNLNKRRRRPEHVDFFVLS-DEPVEMYVPLRFVG--TPVGVREG 113 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA + Sbjct: 114 GVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAINPEETIAAV 173 Query: 185 VAP 187 V P Sbjct: 174 VPP 176 >gi|300871526|ref|YP_003786399.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] gi|300689227|gb|ADK31898.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] Length = 198 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K L +G A +YG + IA+ K+ K ++S Sbjct: 1 MS-ENYTIKALQRDTTKKSVGHKLINDGYALATLYGRGKE-YAIAVELKEFVK-IFSLAG 57 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+TLDI + V+ KDYQLD + + H DF ++ + VP+R E Sbjct: 58 QHDIITLDIQNDQKREVLVKDYQLDGIKRTIRHIDFYEIDRNKKIKTFVPIRI--EGIPE 115 Query: 120 GIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG L V +E+ + +IP ITVD+ +LK+G S+H+ DI+ PE + + Sbjct: 116 GVRLGGGTLEQVEYELPIKAFPGSIPREITVDVTELKVGSSLHISDIKFPEGVDPVGDGS 175 Query: 179 ITIATIV 185 + T+V Sbjct: 176 KAVVTVV 182 >gi|329961417|ref|ZP_08299540.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] gi|328531894|gb|EGF58717.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] Length = 196 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPVEGLRNLIYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNLIPEKLTVNVAHLGLGKTVKVGELSY-ENLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|312622515|ref|YP_004024128.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kronotskyensis 2002] gi|312202982|gb|ADQ46309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kronotskyensis 2002] Length = 200 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMSYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|255034233|ref|YP_003084854.1| 50S ribosomal protein L25/general stress protein Ctc [Dyadobacter fermentans DSM 18053] gi|254946989|gb|ACT91689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dyadobacter fermentans DSM 18053] Length = 188 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +GK A+ LR G +P+++YG + + L++ + Sbjct: 1 MKKHEIVGFKRANLGKVEAQNLRAQGYVPSVLYGGD-EQVHFYAPNMLFRELLFTPDIFN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL+I + I ++ Q PV+D LIHADFLQ+ G + V VP++ S G+ Sbjct: 60 --VTLNIEGTEYNAILQETQYHPVNDALIHADFLQIIPGKEIKVEVPIKLTG--TSTGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGK+N ++ + A NIPD + VD+ +L +G S+ + ++ E ++ + IA Sbjct: 116 KGGKMNQKLRKLRVQGLAENIPDYVNVDVTELDLGKSVKVGALK-AENFVILTATSNPIA 174 Query: 183 TIVAPIS 189 ++ P + Sbjct: 175 SVDIPRA 181 >gi|195942003|ref|ZP_03087385.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi 80a] gi|312149616|gb|ADQ29687.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi N40] Length = 182 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVRVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|224532913|ref|ZP_03673524.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] gi|224512151|gb|EEF82541.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] Length = 182 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSSVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|78189123|ref|YP_379461.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium chlorochromatii CaD3] gi|109893352|sp|Q3ARF7|RL25_CHLCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78171322|gb|ABB28418.1| LSU ribosomal protein L25P [Chlorobium chlorochromatii CaD3] Length = 195 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 8/187 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRK+G +PA++Y + +++ ++K ++S + Sbjct: 1 METIVLGVEPR-VIKKNEAEKLRKSGLVPAVVYHKGEETVAVSIQELALTKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L +L K+ Q PV+D +IHADF S V + VPV E S G+ Sbjct: 58 HIIDLQFPDGKLKRSFIKEVQFHPVTDRIIHADFQLFSADEIVEMVVPVSVSGE--SVGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNI 179 ++GGKL ++ H ++L ++P+ +D+ L + SIH+ +I + + M + + Sbjct: 116 EKGGKLQIIMHSLTLKGKPTDMPEHFVIDITALDLAHSIHVREIPMTNYPGLTIMDEPDA 175 Query: 180 TIATIVA 186 + T++A Sbjct: 176 PVITVLA 182 >gi|222529238|ref|YP_002573120.1| 50S ribosomal protein L25/general stress protein Ctc [Caldicellulosiruptor bescii DSM 6725] gi|254801034|sp|B9MRP3|RL25_ANATD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222456085|gb|ACM60347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor bescii DSM 6725] Length = 200 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IPA+ YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMAYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|154149398|ref|YP_001406855.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter hominis ATCC BAA-381] gi|166223671|sp|A7I2W4|RL25_CAMHC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|153805407|gb|ABS52414.1| ribosomal protein L25, Ctc-form [Campylobacter hominis ATCC BAA-381] Length = 178 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ S++ LR++G + A IY A D K + +K T + Sbjct: 2 LEGIVRESIGRKSSKALRRDGYLIANIYAKGFKNINAAFKVNDFIKVVKAK--TTLPFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + V+ +DYQ PV++ L H D V + VPV+ + + G++ G L Sbjct: 60 KIADKTYKVVVQDYQKHPVTNALKHVDLRIVLDNEISHYLVPVKIVG--VAKGLRNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C ++P+ +D++DL + DS+ + DI+LP+ S + ++ + + Sbjct: 118 VQSKRRLTVKCAGKDLPNEFVLDVSDLDVNDSLLVRDIKLPDNVSIVENNSVAVVGVS 175 >gi|169824827|ref|YP_001692438.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302379682|ref|ZP_07268167.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|303234532|ref|ZP_07321169.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] gi|226736323|sp|B0S2F8|RL25_FINM2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167831632|dbj|BAG08548.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302312589|gb|EFK94585.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|302494366|gb|EFL54135.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] Length = 212 Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 5/185 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL RDKVG + R LR IP +IYG +P + + K++ K ++ ++++ Sbjct: 4 YKLDMQKRDKVGSNAVRKLRVKELIPGVIYGKDFEPINVTVDEKELRK-VHLMAGTSSLI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + E VI KD Q P + +H DF ++ G +PV ++ Q Sbjct: 63 DVKVDGEEHTVIIKDVQKHPFKNHYVHVDFKEIKMGEVANFTIPVVLEGRDEIR--LQPS 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L + EV + C N+P+ V + D++ GD+ ++D+ + ++ + + Sbjct: 121 VLMQLLDEVEIECLPKNLPNEAAVSVIDMQYGDTFEVKDLDVFKNPDIKVLNDETEAVCS 180 Query: 184 IVAPI 188 + P Sbjct: 181 LSEPK 185 >gi|319901552|ref|YP_004161280.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] gi|319416583|gb|ADV43694.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] Length = 196 Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGGG-ENIHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALFNLIPEKLVVNVAHLGLGKTVKVGELNY-ENLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|298246012|ref|ZP_06969818.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] gi|297553493|gb|EFH87358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] Length = 212 Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K+ ++ R+ GK + LR+ G IP I G+ +D I AK + KRL +N + Sbjct: 3 KQIEMDVAPREVFGKK-TKSLRRQGLIPGNIGGHKADSVAIQFEAK-VFKRLQHENRAGS 60 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I L++ GK V+ + + VS + H DF +VS V++ VP+ F+ E SP +K Sbjct: 61 IYALNLPGKGAETVLVHHVEHNTVSGEIQHVDFSRVSMDEQVSIKVPLHFVGE--SPALK 118 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNIT 180 G L + + C A++I +I VDL+ LK + D+I+ DI+LP+ + + Sbjct: 119 DTKGTLLH-MDALEVQCRASDILPAIEVDLSPLKTLDDTIYARDIKLPKGFKLVGDPEES 177 Query: 181 IATIVAPI 188 +A + P Sbjct: 178 VAKVAPPK 185 >gi|296125818|ref|YP_003633070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] gi|296017634|gb|ADG70871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] Length = 196 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K R LR G A +YG + IA+ K+ K ++S Sbjct: 1 MS-ENYTIKALQRDTKFKSVGRKLRNEGYALATLYGRENQ-YSIAVELKEFVK-VFSLAG 57 Query: 61 MTTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+TLDI + V+ KDYQ+D + + H DF ++ + +VP+ E Sbjct: 58 QHDIITLDIENDKAREVLVKDYQIDGIKRSIRHIDFYEIDRNKKIKTYVPIHI--EGIPE 115 Query: 120 GIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG L V + + + +IP + VD+++LK+GDS+H+ DI+ PE + + Sbjct: 116 GVRLGGGTLEQVEYGLPIKAFPGSIPRELIVDVSELKVGDSLHISDIKFPEGVDPVGDGS 175 Query: 179 ITIATIV 185 + T+V Sbjct: 176 KAVVTVV 182 >gi|62297563|sp|P56930|RL25_THETH RecName: Full=50S ribosomal protein L25; Short=TL5 gi|14719583|pdb|1FEU|A Chain A, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|14719586|pdb|1FEU|D Chain D, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|5640135|emb|CAA64209.1| ribosomal protein TL5 [Thermus thermophilus] Length = 206 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR+ G++P ++Y + + + + K + + Sbjct: 2 EYRLKAYYREGEKPSA---LRRAGKLPGLMYNRHL-NRKVYVDLVEFDKVFRQASIH-HV 56 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + L++ + + + + LD H DF +S V ++VP+RF+ G++ Sbjct: 57 IVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVG--TPAGVRA 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA Sbjct: 114 GGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAA 173 Query: 184 IVAP 187 +V P Sbjct: 174 VVPP 177 >gi|219684926|ref|ZP_03539867.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] gi|219671664|gb|EED28720.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] Length = 176 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG ++ + + + + +K+ ++K T+L L Sbjct: 1 LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNNVSHLKIKSSEFNKK-FAKFTDNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 60 DDGKLERCVFVKDVAENVARKLIYHIDFYEVDRRVELEKYVPIKLIG--ASVGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 V+ +V + ++P+ I +DL + GDS+ ++D+ LP + N+ + TI Sbjct: 118 TVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVKLAENDENLEVVTI 175 >gi|254796686|ref|YP_003081522.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] gi|254589925|gb|ACT69287.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] Length = 194 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + + R +G SA +LR++G +PA++YG + +A+S +D+SK + + ++ Sbjct: 3 VSIECIPRTSLGGNSADVLRRSGFVPAVVYGKERENMNVAISVRDVSKHFAVLSG-SGVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L ++ V+PK Y+L PVS +++H DF+ E S+ VP+ F+N KS I+ G Sbjct: 62 ELSCEGKVYKVVPKAYELHPVSSVVLHLDFVFAGEHSS-KFQVPLNFVNSGKSEAIRLGA 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 LN+V V + C A N+P SI VD+ + K+GDSI D+ P+ ++ N +AT+ Sbjct: 121 MLNIVKRTVLVRCAAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATV 180 Query: 185 VA 186 V Sbjct: 181 VG 182 >gi|312128896|ref|YP_003996236.1| lsu ribosomal protein l25p [Leadbetterella byssophila DSM 17132] gi|311905442|gb|ADQ15883.1| LSU ribosomal protein L25P [Leadbetterella byssophila DSM 17132] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +G+ SA+ LR G +P I+YG + A +YS + Sbjct: 1 MKVTEIVGFKRANLGRQSAQELRAEGYVPGILYG-GEEQISFYAPAYLFRPVVYSIDAYE 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L I + I +D Q PV+D LIH D L+++ +T +PVR + G K Sbjct: 60 --IKLTIDGKEYRAILQDKQFHPVNDSLIHVDLLEINPDKVITTTIPVRLTG--TAKGAK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QGGKL +V + PA IP+ + +D+ +L +G SI ++ I LPE + + +A Sbjct: 116 QGGKLVQTLRKVRVKGPAKLIPEFVNLDVTELGLGKSIRVKSIELPE-LTIIDPAANPVA 174 Query: 183 TIVAPIS 189 T+ P + Sbjct: 175 TVTIPRA 181 >gi|68052993|sp|O51727|RL25_BORBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 3/185 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MVENSRVLSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFT 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 60 DNTVLILDDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 118 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 177 Query: 181 IATIV 185 I+ Sbjct: 178 EVVII 182 >gi|76789542|ref|YP_328628.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis A/HAR-13] gi|109893354|sp|Q3KKP2|RL25_CHLTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76168072|gb|AAX51080.1| LSU ribosomal protein L25P [Chlamydia trachomatis A/HAR-13] Length = 185 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V +++P+R+IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNIPIRYINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|161511075|ref|NP_212920.2| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi B31] Length = 182 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|313203697|ref|YP_004042354.1| LSU ribosomal protein l25p [Paludibacter propionicigenes WB4] gi|312443013|gb|ADQ79369.1| LSU ribosomal protein L25P [Paludibacter propionicigenes WB4] Length = 191 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L +R +GK + + R +P ++YG +++ + +I K +YS Sbjct: 1 MKTFDLKGTVRTDLGKKATKAERTVDNVPCVLYG-VAENVHFTTTVSEIRKLVYSPEVF- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+IG ++ I K Q PV+D ++H DFL ++E V V++PV+ E + G+K Sbjct: 59 -VVNLEIGGKVTKAIMKALQFHPVTDKVLHMDFLAITEDKPVVVNLPVKL--EGLAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + + IP++I +D+ +L +G SI + + +P ++ N +A Sbjct: 116 AGGKLALEMRNLKVKGLYTQIPENIVIDVTELGLGKSIQVAKVSVP-NLEILNAKNAVVA 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|51893419|ref|YP_076110.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153112|sp|Q67M29|RL251_SYMTH RecName: Full=50S ribosomal protein L25 1; AltName: Full=General stress protein CTC 1 gi|51857108|dbj|BAD41266.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 205 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 6/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R+ G ++R LR+ G +P IIYG +P I++ + + + + ++ Sbjct: 5 LQLEARTRE-TGSRASRRLRQAGFVPGIIYGPGVEPLAISVPTIQLERLVDR-HGRGHLI 62 Query: 66 TLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + E V+ K Q D ++ + H DFLQV T+T+ VP+ + E ++ ++ Sbjct: 63 NAHVEGEANPRQVVIKQLQRDVLTAQVTHVDFLQVDIHRTITLTVPIAVVGEEQAK--RR 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G + EV + C IP++IT+D++ + + + + P + + + + Sbjct: 121 GLIVTHELAEVEIKCRPTEIPEAITLDISGVTEPGPVTVASLAAPPGVEVLEDPDTVVLS 180 >gi|227550850|ref|ZP_03980899.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257887897|ref|ZP_05667550.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257893303|ref|ZP_05672956.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257896485|ref|ZP_05676138.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|293379263|ref|ZP_06625409.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] gi|227179948|gb|EEI60920.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257823951|gb|EEV50883.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257829682|gb|EEV56289.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257833050|gb|EEV59471.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|292642059|gb|EFF60223.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] Length = 202 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESIGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|284037806|ref|YP_003387736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] gi|283817099|gb|ADB38937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] Length = 188 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +G+ ++ +R G +P ++YG + A +Y+ N Sbjct: 1 MKKIEIVGYQRANLGRTESQAIRAEGNVPCVLYG-GEEQVHFYAPAILFRDLIYTPNIFE 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I I ++ Q PVSD+L+HADFL V++ + + VPVR + +PG++ Sbjct: 60 --VALNIEGAEYRAILQEAQFHPVSDVLLHADFLLVTDKKPIKIAVPVRLVG--TAPGVQ 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGKL ++ + NIPD I VD+ L +G S+ + I + + + + + +A Sbjct: 116 KGGKLVTRVRKLRVKGTVENIPDFIDVDVTGLDLGKSVRVGQIPV-KNIEMLEEASNPVA 174 Query: 183 TIVAPIS 189 +I P + Sbjct: 175 SIEIPRA 181 >gi|188997588|ref|YP_001931839.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932655|gb|ACD67285.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] Length = 197 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 4/173 (2%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + + A+ R+K K + RK G +PA +YG + ++ K + + + NF+ + Sbjct: 3 QTIEWKALPREKAVKSELKNYRKKGYLPAEVYGKGHPNISVYINKKSLLSKPH-GNFLIS 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++ ++ E I KD Q + D IH D +V++G + + VPV F K+ G+++ Sbjct: 62 LV-VEGDPEPKLCILKDIQYSYLGDEPIHVDLYEVTQGLELDIEVPVEFTG--KAIGLEK 118 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 GG H + + NIP+ I +D+++L +GD +H+ DI+ PE M+ Sbjct: 119 GGIFEAHLHSILVRTTPRNIPEKIVIDVSNLDLGDVLHVRDIQAPEGVKIMTH 171 >gi|293573041|ref|ZP_06683983.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] gi|291606943|gb|EFF36323.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] Length = 202 Score = 158 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|227876326|ref|ZP_03994439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269976098|ref|ZP_06183097.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|306817217|ref|ZP_07450964.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] gi|227843099|gb|EEJ53295.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269935691|gb|EEZ92226.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|304650019|gb|EFM47297.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] Length = 208 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K L R + GKG AR R N QIPA++YG+ +DP + L D + Sbjct: 1 MAEKHI-LKVSERTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTFLLVKDN-- 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L+ K+ V+ KD Q PV L+H D L V V V VPV + E Sbjct: 58 PNAVISLEGLKKPAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGEPA--- 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G N+ V +L P +IP++I V+++ ++ G+ + + +++LP +++ Sbjct: 115 --VGTVANLDLLHVEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETV 172 Query: 181 IATIVAP 187 + ++ P Sbjct: 173 VLSVAVP 179 >gi|166154141|ref|YP_001654259.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 434/Bu] gi|166155016|ref|YP_001653271.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335381|ref|ZP_07223625.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2tet1] gi|226736297|sp|B0B926|RL25_CHLT2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736299|sp|B0BAQ5|RL25_CHLTB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|165930129|emb|CAP03613.1| LSU ribosomal protein L25 [Chlamydia trachomatis 434/Bu] gi|165931004|emb|CAP06567.1| LSU ribosomal protein L25 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 185 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V ++VP+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNVPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|317152594|ref|YP_004120642.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] gi|316942845|gb|ADU61896.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] Length = 199 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 7/185 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+ R K GKG R LR +P I Y + + + K Y+K + Sbjct: 5 LQLNVQERTKTGKGHNRRLRLKEMVPGIYYDQKGANIAVQVKLVPLQKA-YAKVGNAKVF 63 Query: 66 TL----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + E + + + +PV+ + H DF V + V V + S G+ Sbjct: 64 ELVLEREGKTETMPALLWRVRNEPVTGMPEHVDFFGVDLTKDIKVAVHYELVG--TSKGV 121 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG+L + ++C IP+SI +D+ DL I DS+++E I PE + + N + Sbjct: 122 KLGGRLQQFRDTIEVICKPMTIPESIVIDITDLDILDSVYIESIAFPEGVTPVFDENYAV 181 Query: 182 ATIVA 186 I Sbjct: 182 LHIAG 186 >gi|111115620|ref|YP_710238.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia afzelii PKo] gi|122956313|sp|Q0SM66|RL25_BORAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110890894|gb|ABH02062.1| general stress protein [Borrelia afzelii PKo] Length = 182 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRF-LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + + ++P++ + S G Sbjct: 59 DNTVLILDDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLVG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVKLAESDDNL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|237713464|ref|ZP_04543945.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262407250|ref|ZP_06083798.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|293370794|ref|ZP_06617340.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|294644676|ref|ZP_06722426.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294809063|ref|ZP_06767785.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|298482671|ref|ZP_07000855.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] gi|229446446|gb|EEO52237.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262354058|gb|EEZ03150.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|292634154|gb|EFF52697.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|292640010|gb|EFF58278.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294443788|gb|EFG12533.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|295087142|emb|CBK68665.1| LSU ribosomal protein L25P [Bacteroides xylanisolvens XB1A] gi|298271134|gb|EFI12711.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] Length = 196 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGGN-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|239618100|ref|YP_002941422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] gi|239506931|gb|ACR80418.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] Length = 215 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A RD K A+ L KNG+IPA++YG + PI++ ++ + + T I Sbjct: 3 EVRLPAEKRDTSVK--AKDLLKNGKIPAVVYGPDVESFPISVDKVEVMRHINHIVETTPI 60 Query: 65 ---LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + K+ H K Q D VSD +IH DF ++G + +H+P+ FI K+ G+ Sbjct: 61 VFEIEENGEKKEYHGFLKAVQRDRVSDAIIHMDFYIPAKGHKMEIHIPIHFIG--KAKGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG L + + + + I +++ V++ L +GD + ++DI LPE ++ + Sbjct: 119 EKGGILEHIITHLPVETLPSTIVEALEVNIEHLDLGDVLRVKDIPLPEGMKVLADPEEPV 178 Query: 182 ATIVAPIS 189 I P S Sbjct: 179 VVIEVPRS 186 >gi|224531516|ref|ZP_03672148.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] gi|224510981|gb|EEF81387.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] Length = 182 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCEYRSSFGSSNARRIRAKYEIPAVVYGQGNDVSHLQIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L+ GK V KD + S ++ H DF +V + +VP++ S G Sbjct: 59 DNTVLILNDGKLERCVFVKDVAENIASKLIYHIDFYEVDRHVELERYVPIKLTG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVKSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|2688715|gb|AAC67123.1| general stress protein (ctc) [Borrelia burgdorferi B31] Length = 214 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 3/178 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 39 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 97 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 98 DDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGIL 155 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V+ +V + ++P+ I +DL + GDS+ ++D+ LP I+ Sbjct: 156 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 213 >gi|289547989|ref|YP_003472977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] gi|289181606|gb|ADC88850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] Length = 193 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ + R K + +RK G +P IYG + + KD+ + T Sbjct: 1 MKRIEVKLIPRKPGKKSEIKRMRKEGYVPVEIYGKDVENTHAYMKVKDLLSL---PHGET 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +I E + K+ Q + D +H D +S + + VPV F+ G+ Sbjct: 58 FLLVAEIEGEKRVCLLKEVQTGWLGDDPLHVDLYDISHVRELELEVPVEFVG--TPAGVG 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG V +++ P + IPD I VD++ L +GD++H+ DI+ PE M +A Sbjct: 116 LGGTFEAVLTTLTVKAPIDRIPDKIVVDVSSLGLGDALHVRDIQPPEGCIIMDNPEEVVA 175 Query: 183 TIV 185 ++ Sbjct: 176 VVL 178 >gi|42524123|ref|NP_969503.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] gi|71153121|sp|Q6MJR4|RL25_BDEBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39576331|emb|CAE80496.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] Length = 212 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 8/184 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+ R+ GK ++R LR + +PA+IYG P +++ K+I K ++ + + Sbjct: 5 IDLTVEPRE-TGKHNSRGLRTSRNVPAVIYGA-VTPTNVSVGEKEIVKY-NTRAYENALF 61 Query: 66 TLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L + + V+ K + P++ H DF + V V+V VR E K+ G+ Sbjct: 62 NLKSSDKTANGIVVLIKSVDVHPLTRRPQHVDFFALDLKKAVRVNVEVRL--EGKAIGLS 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG LNVV V + C IP+ T D+++L +GD++H+ DI++ ++ TIA Sbjct: 120 EGGLLNVVLRSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKVSGSVKMITGAEQTIA 179 Query: 183 TIVA 186 + A Sbjct: 180 VVNA 183 >gi|110639011|ref|YP_679220.1| 50S ribosomal protein L25/general stress protein Ctc [Cytophaga hutchinsonii ATCC 33406] gi|122966643|sp|Q11RT6|RL25_CYTH3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110281692|gb|ABG59878.1| LSU ribosomal protein L25P [Cytophaga hutchinsonii ATCC 33406] Length = 192 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 94/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +GK ++ LR + +P ++YG S + +Y+ T Sbjct: 1 MKQVEIIGYSRANLGKKGSKDLRLDSNVPCVLYGGESQ-LHFHVPMFLFRDIIYTGVACT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L+ + + ++ Q P++++L+H DFL + + V +++PV+F E SPG+ Sbjct: 60 VLLNLE--GKQYKCVVQEVQFHPINEMLLHVDFLLLDDKKQVKMNIPVKF--EGTSPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGKL + + ++PD I D++ L++ S+ + DI+ + ++ +I + Sbjct: 116 KGGKLVQKVATLQVKAFPKDLPDVILADISQLELAKSVKVGDIKT-NNYTILNAKSIPVC 174 Query: 183 TIVAPIS 189 T+ P S Sbjct: 175 TVTIPRS 181 >gi|15605533|ref|NP_220319.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D/UW-3/CX] gi|237803230|ref|YP_002888424.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/Jali20/OT] gi|237805151|ref|YP_002889305.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/TZ1A828/OT] gi|255311635|ref|ZP_05354205.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276] gi|255317936|ref|ZP_05359182.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276s] gi|255349199|ref|ZP_05381206.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70] gi|255503736|ref|ZP_05382126.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70s] gi|255507417|ref|ZP_05383056.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D(s)2923] gi|7674229|sp|O84805|RL25_CHLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3329265|gb|AAC68394.1| General Stress Protein [Chlamydia trachomatis D/UW-3/CX] gi|231273451|emb|CAX10366.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274464|emb|CAX11259.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/Jali20/OT] gi|289525844|emb|CBJ15325.1| LSU ribosomal protein L25 [Chlamydia trachomatis Sweden2] gi|296435426|gb|ADH17604.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/150] gi|296436350|gb|ADH18524.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9768] gi|296437281|gb|ADH19451.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11222] gi|296438209|gb|ADH20370.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11074] gi|296439143|gb|ADH21296.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/11023] gi|297140710|gb|ADH97468.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9301] gi|297748927|gb|ADI51473.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-EC] gi|297749807|gb|ADI52485.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-LC] Length = 185 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V +++P+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNIPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|289704880|ref|ZP_06501297.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] gi|289558376|gb|EFD51650.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] Length = 212 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N + T+ Sbjct: 4 QLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNALLTV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + E V+PKD Q + D + H D ++V G V V + +PG + Sbjct: 64 V--NEAGEEHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVE-VTVQVEGEVAPGTEY- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V V + A ++P+++T+ + + GD ++ D+++P + + +I IAT+ Sbjct: 120 -VLDYV--TVPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIVIATV 176 Query: 185 V 185 Sbjct: 177 S 177 >gi|300814301|ref|ZP_07094573.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511568|gb|EFK38796.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 211 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GK LR G +P +IYG +P ++ +++ +L+ + + I+ + Sbjct: 4 LKLSSRKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVS-GHENVILKLFQEVGTSVIIEV 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ Q L Sbjct: 63 EIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDEIK--VQPSNL 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 V +EV + C +P + V++ D++IGD+I + D+ + E + +AT+ Sbjct: 121 IQVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALDADEVVATLS 180 Query: 186 API 188 AP Sbjct: 181 APR 183 >gi|297587210|ref|ZP_06945855.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] gi|297575191|gb|EFH93910.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] Length = 211 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 85/185 (45%), Gaps = 5/185 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL RD+VG + R LR +P +IYG +P + + K++ K ++ ++++ Sbjct: 4 YKLDMQKRDEVGSNAVRKLRVKEMVPGVIYGKDLEPINVCVDEKELRK-VHLMAGTSSLI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + E VI ++ Q P + +H DF + G +PV ++ Q Sbjct: 63 DVKVDGEDHTVIIREVQKHPFKNQYVHVDFKAIKMGEVANFTIPVVLEGRDEIR--VQPS 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L + E+ + C N+P+ V + D++IG+++ ++D+ + +++ + + Sbjct: 121 VLMQLLDEIEIECLPKNLPNEAVVSVVDMQIGETLEVKDLDVFKNADIKVLNEETEAVCS 180 Query: 184 IVAPI 188 + P Sbjct: 181 LSEPK 185 >gi|323490990|ref|ZP_08096184.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] gi|323395346|gb|EGA88198.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] Length = 214 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 4/185 (2%) Query: 6 CKLSAVMRDKVGKGSA-RLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K++A R+ K SA LR G +P ++YG ++ P+ ++ D+ K L ++ + Sbjct: 2 VKMTAQKRESSNKNSALTELRSQGNVPGVVYGFKTETTPVTVTEIDLIKTLR-ESGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I +V+ DYQ+D + H DFL ++ + V V E S G K+G Sbjct: 61 IKLEIDGTTKNVVLSDYQMDALKGSFKHVDFLAINMSDELEVSAAVHLTGE--SAGEKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + EV++ ++IPD++ VD+ DL IG++I + DIR + + + + + Sbjct: 119 GFITQPNREVNIRVKPSDIPDALEVDITDLAIGETITVGDIRGTVSYEILDEDDFILVSA 178 Query: 185 VAPIS 189 AP + Sbjct: 179 TAPRT 183 >gi|119953561|ref|YP_945771.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia turicatae 91E135] gi|254801036|sp|A1R0K9|RL25_BORT9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119862332|gb|AAX18100.1| LSU ribosomal protein L25P [Borrelia turicatae 91E135] Length = 182 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD L R G AR +R +IPA++YG SD I +++ + +KR ++K Sbjct: 1 MDSSRI-LKYESRLNFGSLCARRIRAKSEIPAVVYGKESDVLHIKIASNEFNKR-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L GK V KD + ++ H DF +V + ++ ++F+ S G Sbjct: 59 DNTVLILSDGKVERCVFIKDVSENITKGLIYHVDFYEVDRNRDIERYIAIKFVG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 +K+GG L+V+ ++ + ++P+ + VDL +K G I +DI LPE + Sbjct: 117 VKEGGTLSVLRTKIKVKALPLDLPEFVEVDLTPVKKGHQITFKDIVLPENVKLAEEDE 174 >gi|320160883|ref|YP_004174107.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] gi|319994736|dbj|BAJ63507.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] Length = 210 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 7/178 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L A R A+ LR+ G +PA++YG PI L A + +L +K + Sbjct: 1 MEKIVLQAQRRTLERT--AKALRREGYLPAVMYGAHFPSTPILLDAHNAGLKL-AKVSSS 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ +++ E + ++ Q D + + L+H DF VS + V + F E SP +K Sbjct: 58 TLVYIELDGETHAALVREKQRDYIKNRLLHVDFQVVSLTEKIRTTVSLHF--EGVSPAVK 115 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLN 178 G + EV + ++P+ I VDL+ L IGD+IH+ D+ + + ++ + Sbjct: 116 DYNGVVVTSLDEVEVEALPQDLPERIVVDLSKLARIGDTIHVRDLEVAKGVKVLNDPD 173 >gi|223038596|ref|ZP_03608889.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] gi|222879998|gb|EEF15086.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] Length = 178 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKESLA--FDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G++ + V+ +YQ DPV++ L H D G +PV+ G+K G L Sbjct: 60 KVGEKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPVKPYG--TPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V +++ C A N+P+S +D++ L + D++ + DI +P + + + + ++ Sbjct: 118 IVSKRRLAVKCAAENLPNSFDIDVSGLDVDDTVLVRDIAVPAGVTIVDADRVAVLGVI 175 >gi|312876056|ref|ZP_07736045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] gi|311797254|gb|EFR13594.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] Length = 198 Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 3/172 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 RD K + LRK G IP + YG+ P +S K+ K LY + + + + I + Sbjct: 10 RDVFTKSNLNKLRKEGYIPTVAYGDDIKSLPGYVSKKEFEK-LYHQKGLAGKIKISIDGK 68 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 69 ERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILK--SRGLVLQRQMD 126 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 127 TVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|307324318|ref|ZP_07603526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] gi|306890049|gb|EFN21027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] Length = 199 Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 7/182 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+SA R + GKG+AR R ++P ++YG+ DP + L A D+ L + N + + Sbjct: 3 EVKISAKPRTEFGKGAARRTRAANRVPGVVYGHGVDPLHVTLPAHDLLMALKTPNVLLRV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 G + VIPK Q P+ +L H D L V +G VTV VP+ + +PG Sbjct: 63 KV--EGGKDELVIPKAVQRHPIKIGVLEHVDLLLVKKGEKVTVEVPI-LTEGDLAPG--- 116 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L + + + + A +IP+S+TV + L G +IH +DI LP T+ + + + Sbjct: 117 GNLLEHLLNALPVETEATHIPESVTVSIAGLDAGATIHAKDITLPAGTTLAVEEDAAVLQ 176 Query: 184 IV 185 +V Sbjct: 177 VV 178 >gi|297624374|ref|YP_003705808.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] gi|297165554|gb|ADI15265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] Length = 208 Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 9/182 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R LR G++P ++Y P+++ ++ K S+ +++ Sbjct: 1 MNLTAQRRTPGKTSD---LRAQGRLPGVVYNKEL-NIPVSVELREFDKAFRSQGV-ASLI 55 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + E V+ K Q+D +H DF V+ G V V VP+ F+ + G ++GG Sbjct: 56 NLQLDGESHDVLVKAVQMDKRRREPLHVDFYAVTAGQPVDVFVPINFVG--TAIGAREGG 113 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKTSSMSQLNITIAT 183 +++ H+V + IP+ I VD++ L I DS+H++D+ LP + + L T+ T Sbjct: 114 QVDAQRHQVHIRILPRLIPNHIDVDVSALAINDSLHLKDVLSALPSEAEVLDDLEETLIT 173 Query: 184 IV 185 I+ Sbjct: 174 IL 175 >gi|307701513|ref|ZP_07638531.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] gi|307613305|gb|EFN92556.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] Length = 208 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K L R + GKG AR R N QIPA++YG+ +DP + L D + Sbjct: 1 MAEKHI-LKVSERTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTFLLVKDN-- 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L+ K+ V+ KD Q PV L+H D L V V V VPV + E Sbjct: 58 PNAVISLEGLKKPAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGEPA--- 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G N+ V +L P +IP++I V+++ ++ G+ + + +++LP +++ Sbjct: 115 --VGTVANLDLLHVEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETV 172 Query: 181 IATIVAP 187 + ++ P Sbjct: 173 VLSVAVP 179 >gi|116332055|ref|YP_801773.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280213|sp|Q04Q05|RL25_LEPBJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116125744|gb|ABJ77015.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 212 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R + GK LR +G IP I G A++ K+++K ++S Sbjct: 1 MSQSTIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVA-TSGAVNEKELAKMVHSGI 59 Query: 60 FMTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ + V K+ Q P D + H DF +V G + + + + Sbjct: 60 RQSTLIELDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTG--VA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 118 KGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPASWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|15834802|ref|NP_296561.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270284968|ref|ZP_06194362.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270288992|ref|ZP_06195294.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Weiss] gi|301336365|ref|ZP_07224567.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum MopnTet14] gi|13633862|sp|Q9PLC2|RL25_CHLMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7190219|gb|AAF39056.1| general stress protein Ctc [Chlamydia muridarum Nigg] Length = 185 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMT 62 +L R+ K + +R+ G IPA++Y + + A+ +K L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANVVIDARVFNKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVEDREVRLNIPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DIR+PE ++ L Sbjct: 121 LGGSLRQVIRYMRVVCKPKDIVPFLELDVQSLGLSQTLKLSDIRIPEGIKPVTPLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|253681263|ref|ZP_04862061.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253562501|gb|EES91952.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 192 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M Q ++ R+K LR+NGQ+P I+YG ++ PI ++ + + L + N Sbjct: 1 MSQVAIAIN--EREKTDTNG--RLRRNGQVPCIMYGEHLEKAVPIKVNYNQLMRILKN-N 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +IL L + E+ + + K+ Q D V+ +IH DF VS+ + + +P+ F NK Sbjct: 56 SKGSILKLQLNNEIKNCVIKEIQQDIVTGKVIHVDFQNVSKDEIIKMTIPIEFTGINKLQ 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L E+ + IP++I +D + L G+ + + DI+LPE +S N Sbjct: 116 SKRL--ILETFITEIDMQGKVQEIPEAIKIDASKLDFGNKLFVHDIKLPEGIRLLSDPNA 173 Query: 180 TIATI 184 +A + Sbjct: 174 LVAVV 178 >gi|216263570|ref|ZP_03435565.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] gi|215980414|gb|EEC21235.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] Length = 182 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ ++K Sbjct: 1 MENSRV-LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + + ++P++ + S G Sbjct: 59 DNTVLILDDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLVG--ASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVKLAESDDNL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|239917085|ref|YP_002956643.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|281414453|ref|ZP_06246195.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|259646691|sp|C5C9D7|RL25_MICLC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239838292|gb|ACS30089.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] Length = 207 Score = 157 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 7/180 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N + T+ Sbjct: 4 QLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNALLTV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + E V+PKD Q + D + H D ++V G V V + +PG + Sbjct: 64 V--NEAGEEHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVE-VTVQVEGEVAPGTEY- 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V V + A ++P+++T+ + + GD ++ D+++P + + +I IAT+ Sbjct: 120 -VLDYV--TVPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIVIATV 176 >gi|182438175|ref|YP_001825894.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778825|ref|ZP_08238090.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] gi|178466691|dbj|BAG21211.1| putative 50S ribosomal protein L25 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659158|gb|EGE44004.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] Length = 195 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ ++PA++YG+ ++P + L ++ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRVRRADRVPAVVYGHGAEPVHVTLPGHELLLALRTAN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ + VIPK Q P+ + H D L V G V V + V + +PG Sbjct: 60 IGLELDGKDALVIPKAVQRHPLKGTIEHVDLLTVKRGEKVQVEIAVHAEG-DLAPGA--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+S+TV + L GDSI +DI LP+ + + + + Sbjct: 116 NLLEFVQNTLLVEAEATHIPESVTVSVAGLDAGDSIVAKDIALPKGSVLAGDEDAIVIQV 175 Query: 185 V 185 V Sbjct: 176 V 176 >gi|282881840|ref|ZP_06290493.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] gi|281298332|gb|EFA90775.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] Length = 210 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GK LR G +P +IYG +P ++ +++ +L+ + + I+ + Sbjct: 4 LKLSSRKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVS-GHENVILKLFQEVGTSVIIEV 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ Q L Sbjct: 63 EIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDEIK--VQPSNL 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 V +EV + C +P + V++ D++IGD+I + D+ + E + + +AT+ Sbjct: 121 IQVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALEADEVVATLS 180 Query: 186 API 188 AP Sbjct: 181 APR 183 >gi|160892146|ref|ZP_02073149.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270296234|ref|ZP_06202434.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|317480855|ref|ZP_07939936.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] gi|156858624|gb|EDO52055.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270273638|gb|EFA19500.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|316902940|gb|EFV24813.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] Length = 196 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKN +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKNNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAIMKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQM--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + +++ L +G ++ + +++ E ++ Sbjct: 116 AEGVKAGGKLVLQMRKLKVRALYNVIPERLIINVAHLGLGKTVKVGELQY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|255692808|ref|ZP_05416483.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] gi|260621437|gb|EEX44308.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] Length = 196 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEMRKNGGVPCVLYGGN-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + ++++ L +G +I + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIINVSHLGLGKTIKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|15639363|ref|NP_218812.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum str. Nichols] gi|189025605|ref|YP_001933377.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum SS14] gi|68052994|sp|O83387|RL25_TREPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694581|sp|B2S2W9|RL25_TREPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3322650|gb|AAC65357.1| general stress protein (ctc) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018180|gb|ACD70798.1| general stress protein [Treponema pallidum subsp. pallidum SS14] gi|291059763|gb|ADD72498.1| ribosomal protein L25, Ctc-form [Treponema pallidum subsp. pallidum str. Chicago] Length = 196 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD++ +L R ++GK +A RK G++PA++Y + P+ L+ +D RL+ Sbjct: 1 MDER--RLKGKRRVQLGKYAAVRGRKEGRLPAVMYDHRGVSVPLELAQQDFD-RLFRALT 57 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+L+L++ G E+ V KDYQ + VSD + H DF V E + + + ++ Sbjct: 58 RSTVLSLELDGGEVFCVFVKDYQHNMVSDRVEHVDFYAVEESVPLRMRIRLQLCG--SPE 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ G +L + + N+PD + +D++ L GD + D+ LP +S + Sbjct: 116 GVRYGARLEKGLSYIEVESLPRNLPDRVVLDISGLGAGDVRRVRDVPLPASVVVLSDPDA 175 Query: 180 TIATIVAPIS 189 I + + S Sbjct: 176 VIVALSSSAS 185 >gi|110597921|ref|ZP_01386203.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] gi|110340498|gb|EAT58984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] Length = 199 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRKNG +PA+IY + P++++ + K ++S + Sbjct: 1 METIVLGVEPR-VIKKKDAEKLRKNGIVPAVIYHKGEETIPVSVNEIALKKLVHSAE--S 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + K Q PV+D +IH DF + + + VPV S G+ Sbjct: 58 HIIDLQFPDGRIKRSFIKQVQFHPVTDRIIHTDFQLFAADEVIELEVPVSVTG--DSIGV 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNI 179 ++GG+L ++ H +++ ++PD + VD+ L+IG SIH+ +I + + Sbjct: 116 EKGGRLQIIRHALTIKGKPEDMPDHLIVDVTALEIGHSIHVREIPMTAYAGLVISDDPDT 175 Query: 180 TIATIVA 186 + T++A Sbjct: 176 PVITVLA 182 >gi|257881467|ref|ZP_05661120.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257885739|ref|ZP_05665392.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260558395|ref|ZP_05830591.1| ribosomal protein L25 [Enterococcus faecium C68] gi|261207102|ref|ZP_05921791.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289565896|ref|ZP_06446336.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|293556880|ref|ZP_06675441.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|294616087|ref|ZP_06695898.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|294619422|ref|ZP_06698877.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|294621228|ref|ZP_06700413.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|314938857|ref|ZP_07846128.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] gi|314943662|ref|ZP_07850416.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|314952190|ref|ZP_07855208.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|314994548|ref|ZP_07859814.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|314996547|ref|ZP_07861584.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|257817125|gb|EEV44453.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257821595|gb|EEV48725.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260075569|gb|EEW63875.1| ribosomal protein L25 [Enterococcus faecium C68] gi|260078730|gb|EEW66432.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289162269|gb|EFD10129.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|291591050|gb|EFF22748.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|291594334|gb|EFF25756.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|291599224|gb|EFF30256.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|291600964|gb|EFF31255.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|313589288|gb|EFR68133.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|313591070|gb|EFR69915.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|313595722|gb|EFR74567.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|313597699|gb|EFR76544.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|313641868|gb|EFS06448.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] Length = 202 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|116327330|ref|YP_797050.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284866|sp|Q054X8|RL25_LEPBL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116120074|gb|ABJ78117.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 212 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R + GK LR +G IP I G A++ K+++K ++S Sbjct: 1 MSQSTIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVA-TSGAVNEKELAKMVHSGI 59 Query: 60 FMTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ + V K+ Q P D + H DF +V G + + + + Sbjct: 60 RQSTLIELDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTG--VA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 118 KGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPASWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|257899451|ref|ZP_05679104.1| ribosomal protein L25 [Enterococcus faecium Com15] gi|257837363|gb|EEV62437.1| ribosomal protein L25 [Enterococcus faecium Com15] Length = 202 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ + Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANKV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|51246585|ref|YP_066469.1| 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] gi|71153141|sp|Q6AJL8|RL25_DESPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50877622|emb|CAG37462.1| related to 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] Length = 183 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +++A +R+ GKG R LR+ G PA++YG P+ + AK + +L + + T+ Sbjct: 3 QVEMTASVREAFGKGPMRRLRQQGITPAVVYGAGKAALPLQMDAKILMTQLLEFSRVNTV 62 Query: 65 LTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++L + + +V+ + Q DPV+D L+H DF ++ VPV F E G+ Sbjct: 63 VSLSVDGQDAKNVVIAEIQSDPVTDALVHVDFCEIDLDQAREFTVPVTF--EGTPKGVDL 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG+L V L +IP+ +++ DL I + + + D+ L E ++ + Sbjct: 121 GGRLESHLTSVILKAKPLDIPNEFVINIADLAIDEQLTVADVALAENVVMVTPAARVMVA 180 Query: 184 IV 185 ++ Sbjct: 181 VL 182 >gi|297572063|ref|YP_003697837.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] gi|296932410|gb|ADH93218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] Length = 193 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A +R + GKG+AR LR+ ++P ++YG+ +P + L + +L+ Sbjct: 4 TLKADIRKEFGKGAARRLRREEKLPGVLYGHEEEPMHLELDYHTTFLAVRGNA--NALLS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ E I KD Q +P+S ++ H D L+V +G V V VPV E I Sbjct: 62 IEVEGEKHLAIVKDVQRNPLSRLIEHIDLLRVKKGEKVDVEVPVVVEGEPAGDAIATVEL 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V+ PA IP++ITV++ L+ G + + D++LPE + I Sbjct: 122 LQVMA-----KAPAIAIPEAITVNVEGLEEGTHVTVADLKLPEDVEVELDPETIVVVIAV 176 Query: 187 P 187 P Sbjct: 177 P 177 >gi|328958225|ref|YP_004375611.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] gi|328674549|gb|AEB30595.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] Length = 209 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 95/186 (51%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K++A +R +VG +A R+ ++ A++ G + L +K++ L + Sbjct: 4 ENNMKVNATLRTEVGSSAANRARREKKVTAVVNGKGITSTAVLLDSKELDNVLKTL-GKN 62 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I + + E VI K+ Q + + ++ + + +G +TV VP+ +N + + Sbjct: 63 AIFDVAVQDGETHQVIIKEIQNATLVNQILDVELQVIQKGEKLTVTVPINVLN---ADAV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+ G ++ +E+ + NIP TVD++ L+IGD++++ DI++ + + +S ++ Sbjct: 120 KR-GIVSQTLNELEIETLPANIPTEFTVDVSKLEIGDALYVSDIKVDKAITVLSDAEQSV 178 Query: 182 ATIVAP 187 +++ P Sbjct: 179 VSVLPP 184 >gi|255007966|ref|ZP_05280092.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis 3_1_12] gi|313145682|ref|ZP_07807875.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] gi|313134449|gb|EFR51809.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] Length = 196 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +R NG +P ++YG + ++ + + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKEIRNNGGVPCVLYGGG-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIH--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLALQMRKLKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|69249937|ref|ZP_00605063.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257878830|ref|ZP_05658483.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257890689|ref|ZP_05670342.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|258615099|ref|ZP_05712869.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecium DO] gi|293563627|ref|ZP_06678071.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|314949097|ref|ZP_07852457.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] gi|68194053|gb|EAN08602.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257813058|gb|EEV41816.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257827049|gb|EEV53675.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|291604427|gb|EFF33917.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|313644513|gb|EFS09093.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] Length = 201 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|331268280|ref|YP_004394772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329124830|gb|AEB74775.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 192 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M Q ++ R+K LR+NGQ+P I+YG ++ PI ++ + + L + N Sbjct: 1 MSQVAIAIN--EREKTDTNG--RLRRNGQVPCIMYGEHLEKAIPIKVNYNQLIRILKT-N 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +IL L + + + + K+ Q D V+ +IH DF VS+ + + +P+ F +K Sbjct: 56 SKGSILKLQLNNQTKNCVIKEIQKDTVTGKIIHIDFQNVSKDEIIKMTIPIEFTGIDKLQ 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L E+ + IP++I +D + + + + + DI+LPE +S N Sbjct: 116 SKRL--ILETFITEIDMQGKVQEIPETIKIDASKMNFNNKLFIHDIKLPEGIRLLSDPNA 173 Query: 180 TIATI 184 +A I Sbjct: 174 LVAVI 178 >gi|53712489|ref|YP_098481.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis YCH46] gi|60680689|ref|YP_210833.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis NCTC 9343] gi|253563480|ref|ZP_04840937.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|265762652|ref|ZP_06091220.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|68053087|sp|Q64X29|RL25_BACFR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81316243|sp|Q5LG55|RL25_BACFN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52215354|dbj|BAD47947.1| putative 50S ribosomal protein L25 [Bacteroides fragilis YCH46] gi|60492123|emb|CAH06886.1| putative ribosomal L25p family stress protein [Bacteroides fragilis NCTC 9343] gi|251947256|gb|EES87538.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|263255260|gb|EEZ26606.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|301162216|emb|CBW21761.1| putative ribosomal L25p family stress protein [Bacteroides fragilis 638R] Length = 196 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +R NG +P ++YG + ++ + + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKEIRNNGGVPCVLYG-GEEVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +T++++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLALQMRKLKVKALYNIIPEKLTINVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|307299263|ref|ZP_07579064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915059|gb|EFN45445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] Length = 214 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L A +R+ K AR L G+IPA++YG + P++L +I + + T++ Sbjct: 3 EINLVAELRNGEMK--ARSLLNQGKIPAVVYGPELETVPVSLDKVEILRIMNRIAETTSV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + H K Q D V+D +IH DF S G + + +P+R G+++G Sbjct: 61 V-ISIDGKEYHTFLKGVQRDKVTDSVIHLDFYVPSSGHKMELRIPIRLKG--TPIGVEKG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ + +E+ + +I + I VD++ +G + + D+ +PE + I I Sbjct: 118 GIVDHIINELPVSVLPKDIVEEIIVDVSSFDVGHVLRVGDLEIPEGIKPLLDDEDAIMLI 177 Query: 185 VAPISG 190 P + Sbjct: 178 ALPRAA 183 >gi|227832720|ref|YP_002834427.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|262182791|ref|ZP_06042212.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|227453736|gb|ACP32489.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R + GKG AR LR G+IP ++YG+ D A+ +++ + + + Sbjct: 1 MANTRPVLKAEVRSEFGKGFARRLRAAGKIPGVVYGHAVDVLHFAVDRLEMTALVRN-HG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L++ E V+ K + ++ + H D L + G V V V + +PG Sbjct: 60 VNAVFELELEGEQHLVMVKHIDQNVLTFNIDHIDLLSIKRGEKVEVEV-PVVLEGEPAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +V+ + NIP+ I V + L+ G + ++ LPE T+ ++ + Sbjct: 119 LMFIQDADVLL----VEADVLNIPEEIVVSIEGLEDGTVVTAGEVSLPEGTTLAAEEDTV 174 Query: 181 IATIVAP 187 I +I P Sbjct: 175 IVSISEP 181 >gi|24216520|ref|NP_714001.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45656329|ref|YP_000415.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|71153147|sp|Q72V72|RL25_LEPIC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153148|sp|Q8EZN1|RL25_LEPIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|24197831|gb|AAN51019.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45599563|gb|AAS69052.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 212 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R GK LR +G +P I G A++ K++ K ++S Sbjct: 1 MSQNTIHKIAVKKRTTTGKNENNRLRSSGMVPVNIIGGGVA-TSGAVNEKELEKMVHSGI 59 Query: 60 FMTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ + V K+ Q P D + H DF +V G + + + + Sbjct: 60 RQSTLIELDVEGQGAQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTG--IA 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 118 KGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPTSWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|291286406|ref|YP_003503222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] gi|290883566|gb|ADD67266.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] Length = 207 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 8/187 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + K A R ++ G +R+ G +PAII D + L+AKDI KR F Sbjct: 3 QTIKWDATKRKQMTDGELNDMRRQGFVPAIISIRGEDSVSVFLNAKDIQKRP----FGNF 58 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L + E K Q + SD +IHAD + +G + + V F+ E G+ Sbjct: 59 RIELKVKGIKEPFDCFLKTLQYNHTSDKVIHADLQALVKGQEIDIDVHFDFVGE--PAGL 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG LN V + NIP+ ITVD++ L IGDSIH+ DI+ E+ + + TI Sbjct: 117 KMGGILNTGHTSVKIRTLPRNIPEKITVDISGLNIGDSIHISDIKFSEEHTLLEPTEGTI 176 Query: 182 ATIVAPI 188 A + P Sbjct: 177 AYVSEPR 183 >gi|269838096|ref|YP_003320324.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] gi|269787359|gb|ACZ39502.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] Length = 218 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 7/174 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 +L A R +GK R LR+ G +P +IYG + P+P+A+ K+ RLY TT++ Sbjct: 6 QLQAQQRAVLGKK-VRQLRRQGLLPGVIYGPAVETPRPVAIDGKEFD-RLYRNVGPTTLV 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ V + D + L+H DF + V V + + E + G Sbjct: 64 DLDLDGTTHTVFIRGVDRDSLGKELLHVDFYAPNLNEPTVVSVAINVVGELPA---SVDG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLN 178 L +V + NIP I VD++ L +IH+ D+++PE ++ + Sbjct: 121 VLTYGRQDVEIRALPENIPSQIEVDISGLTNENRAIHVSDLQVPEGCEILTPGD 174 >gi|228469534|ref|ZP_04054527.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] gi|228308884|gb|EEK17559.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] Length = 200 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 6/171 (3%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL 73 D++GK + + LR+ +P ++YG S+ K + + A D++K +Y+ ++ LD+ + Sbjct: 5 DQLGKKATKALRREELVPVVLYG-GSETKHLVVKADDLNKLIYTPEIY--LIELDVEGKQ 61 Query: 74 VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE 133 + KD Q PVSD +HAD +VSE + + VPV I E + G++ GGKL Sbjct: 62 HKAVLKDVQFHPVSDKTLHADLYEVSEEKPIVMRVPV--ILEGHAIGVRAGGKLVREKRT 119 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + IP+++ +D+N+LK+G +I + ++ E + + + Sbjct: 120 LRVRAIYDKIPENLVIDVNNLKLGKTIQVHELSF-EGLELVDAPQAVVCGV 169 >gi|295694755|ref|YP_003587993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] gi|295410357|gb|ADG04849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] Length = 212 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R + + LR++G+IP ++YG +P P+A+ + K + Sbjct: 1 MSAQVLPLEA--RADLRRSVLTHLRRSGRIPGVVYGKGREPVPVAVEEALLVKMQTGQET 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L G+ + + ++ Q DPV+ ++H DF V V V VPV+ + Sbjct: 59 ALVDIELP-GQGRLPAVIQEIQRDPVTRKILHVDFHVVMLDEPVDVEVPVQVQGIEEVD- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K+G V+ + + C IP+ + VD++ + GD I D++LP+ + + + Sbjct: 117 -KRGLVAQVLLRHLRIRCLPTEIPEHLRVDVSRAEEGDVIRAADVQLPDGAHLLEEADEV 175 Query: 181 IATIV 185 + I Sbjct: 176 VVNIS 180 >gi|203284680|ref|YP_002222420.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|203288213|ref|YP_002223228.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] gi|226736283|sp|B5RMX8|RL25_BORDL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736286|sp|B5RQC3|RL25_BORRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|201084123|gb|ACH93714.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|201085433|gb|ACH95007.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] Length = 182 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R K G AR+LR +IPA++YG SD I +++ + K+ ++K T+L L Sbjct: 7 LKYEGRSKFGSSCARILRAKSEIPAVVYGKESDVLHIKINSNEFDKK-FAKFTDNTVLLL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + G V KD + + H DF +V + + ++FI S G+K+GG L Sbjct: 66 NDGMVEKCVFIKDVSENLTKKFIYHIDFYEVDRTREIERDISIKFIG--ASVGVKEGGTL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 +V+ + V + N+P+ + VDL +K GD I ++DI L + + N+ + + Sbjct: 124 SVLRNTVKVKALPLNLPEFVEVDLTPVKKGDQITLKDIVLSDNVKLSETDENLAVLFV 181 >gi|160887365|ref|ZP_02068368.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|237722654|ref|ZP_04553135.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|299148941|ref|ZP_07042003.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] gi|156107776|gb|EDO09521.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|229448464|gb|EEO54255.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|298513702|gb|EFI37589.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] Length = 196 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGGN-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|118444097|ref|YP_877070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] gi|118134553|gb|ABK61597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 194 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKN 59 M Q +S ++ +A +R+NG++P IIYG ++ P+ +S + + L +N Sbjct: 1 MSQAAIAIS----ERQKTDTANKIRRNGEVPCIIYGEHLEKSIPVKVSYNKLMRLLK-EN 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +I L + E+ + + K+ Q D +S +IH DF V++ + + +PV F Sbjct: 56 SKGSIFKLKLNDEIRNCVIKEIQNDALSGNVIHVDFQNVNKNEVIKMTIPVEFTGIESLQ 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K L E+ + IP++I +D + + D I + DI+LPE +S+ + Sbjct: 116 SRKL--ILETFITEIEMQGKVEEIPENIVIDASTMNFDDKIFVHDIKLPEGIRLLSEADA 173 Query: 180 TIATI 184 +A + Sbjct: 174 LVAVV 178 >gi|297172152|gb|ADI23133.1| ribosomal protein L25 (general stress protein Ctc) [uncultured gamma proteobacterium HF0770_09E07] Length = 238 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Query: 3 QKECKLSAVMRDKVGKGSARL-LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + KL A R+++G + + + K+ ++P IIYG P+PI + ++ K + ++ Sbjct: 1 METLKLKAEKREEIGGLAPKKAIYKDNKVPGIIYGGKDQPQPIYVQKNELLKIISNEGLF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I+ ++I + +V+ K+ Q P ++ H D +V +G+ VTV VPV N++ G+ Sbjct: 61 NSIVEIEIESKKENVVFKEVQKHPSKNVFTHIDLQRVVKGTQVTVTVPVVLKNQDNCYGV 120 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT---SSMSQL 177 K +GG +N VC E+++L +IP+SI VD+ ++K +++ + + L E +++ + Sbjct: 121 KMEGGVINHVCKEITVLSSPESIPESIEVDMEEIKTKENVRLSSLSLNEGYDFPTNLKEQ 180 Query: 178 NITIATIVAPISG 190 + + +++ G Sbjct: 181 DPVLVSVLTARGG 193 >gi|298372822|ref|ZP_06982812.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] gi|298275726|gb|EFI17277.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] Length = 221 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 28/211 (13%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---------MSDPKPIALS------ 47 K +L R ++GK + + LR G IPA++YG+ + + + Sbjct: 1 MKTFQLEGKPRKEIGKKAVKALRGEGLIPAVLYGHRSVELPYSGKLEDGQVLVENQGKGV 60 Query: 48 --------AKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 + K +YS I+ L+IG + KD QL PV+D ++H DFL V Sbjct: 61 VVTNFTVTTDAVRKLIYSPEVF--IVELNIGGHKQTAMLKDLQLHPVTDEILHIDFLAVF 118 Query: 100 EGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS 159 +T+ VPV + + G++ GGKLN++ ++ + + +IP+ + +++ +L++G + Sbjct: 119 PDIPMTIEVPVVL--DGFAAGVRAGGKLNLISKKLKVKGLSKDIPEKLHINVENLELGKA 176 Query: 160 IHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 I ++ + + + ++ + + + Sbjct: 177 IQIKHLNF-DNLTLLNAPDNVVCVVAVTRGA 206 >gi|237751112|ref|ZP_04581592.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] gi|229373557|gb|EEO23948.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] Length = 178 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +RD +GK +A+ L+++G + A IYG + A D K + +K T I + Sbjct: 2 LEGKLRDSIGKTNAKALKRDGYLVANIYGKGKENIHCAFKRNDFIKYMRAK--QTLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + V+ ++YQ DPV+ ++H D + ++G VPV+ G+K G L Sbjct: 60 KIDGNVYDVVVQEYQKDPVTSDILHVDMMFATKGCVAKYKVPVKVTG--SPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V++ C A +P+ T+D++ L +G +I + D+ S + + ++ I ++ Sbjct: 118 VFSRKRVAVKCDAAVLPNDYTLDVSGLDVGHAILVRDLPEIAGVSVIEKPSVAIVGVI 175 >gi|260171341|ref|ZP_05757753.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D2] gi|315919652|ref|ZP_07915892.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693527|gb|EFS30362.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 196 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+G +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKDGGVPCVLYGGN-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ E Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQL--EGL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|239941864|ref|ZP_04693801.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|239988326|ref|ZP_04708990.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 11379] gi|291445312|ref|ZP_06584702.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|291348259|gb|EFE75163.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] Length = 196 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL+ +R + GKG+AR +R+ ++P ++YG+ ++P + L ++ L + N + Sbjct: 3 EIKLATEVRTEFGKGAARRVRRADRVPGVVYGHGAEPVHVTLPGHELLLALRTAN---VL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I + VIPK Q P+ + H D L V G V V + V + +PG Sbjct: 60 IGLEIDGKDALVIPKAVQRHPLKGTIEHVDLLTVKRGEKVEVEIAVHAEG-DLAPGA--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + + + A +IP+S+TV + L G SI +DI LP+ + + + + Sbjct: 116 NLLEFVQNTLLVEAEATHIPESVTVSVAGLDAGASIVAKDIPLPKGSVLAGDEDAIVIQV 175 Query: 185 V 185 V Sbjct: 176 V 176 >gi|154249290|ref|YP_001410115.1| 50S ribosomal protein L25/general stress protein Ctc [Fervidobacterium nodosum Rt17-B1] gi|189042356|sp|A7HKM5|RL25_FERNB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154153226|gb|ABS60458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fervidobacterium nodosum Rt17-B1] Length = 219 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 11/193 (5%) Query: 5 ECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMT 62 E +SA +R VG K + R LR G IPA+ YG + P + L+ D K ++ + Sbjct: 2 EHVVSAQLRSIVGNKRAVRRLRATGAIPAVAYGPGLEKPLSLVLNKTDFLK-IFKHITES 60 Query: 63 TILTLDIGKE------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 T LTL + E K Q D V+D + H DF + ++VP+ + Sbjct: 61 TPLTLVVKDENDKEVLKHLAFIKMVQYDKVTDEVKHVDFYVPEAHHKMRINVPIEIVG-- 118 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 K+ G+++GG + ++ HEV + + +P+ I +D+ +L++G+++ ++D+ LPE Sbjct: 119 KAIGVEKGGIMEIIHHEVPVKALPDRVPEVIKIDVTNLELGETLRVKDVVLPEGVEIDMD 178 Query: 177 LNITIATIVAPIS 189 + T+V P Sbjct: 179 DEDVLITVVVPRG 191 >gi|189501903|ref|YP_001957620.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Amoebophilus asiaticus 5a2] gi|226736276|sp|B3ERN9|RL25_AMOA5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189497344|gb|ACE05891.1| hypothetical protein Aasi_0482 [Candidatus Amoebophilus asiaticus 5a2] Length = 196 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK +++ LR + Q+P ++YG + + +Y+ Sbjct: 1 MKTIEIIGYRRANLGKQASKQLRNDAQVPGVLYG-GKEQVHFYTPMAILKDLVYTPQAYF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL++ + + I +D Q PV+++++H D LQ+ E + + +P+ + +PG+ Sbjct: 60 --VTLNLEGAIYNCILQDIQFHPVNEVILHIDLLQIFEDKQIKMDIPIVLVG--DAPGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L ++S++ ++PD+I VD++ L +G + I+ E + ++ +A Sbjct: 116 KGGNLVHKKKKLSVVAYPKDMPDTIPVDISGLDVGQMTRVSHIK-AENYTILAVPGTPVA 174 Query: 183 TI 184 + Sbjct: 175 VV 176 >gi|84683373|ref|ZP_01011276.1| Ribosomal protein L25 [Maritimibacter alkaliphilus HTCC2654] gi|84668116|gb|EAQ14583.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2654] Length = 180 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 1/157 (0%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL-VHVIPKDYQLDPVSDILIH 92 +YG DP PI ++ + K+L F++T+ L + + V VI ++ Q D V D+ H Sbjct: 1 MYGGDVDPLPININFNMLLKKLKDGRFLSTLFNLKVEGQDDVRVICRNVQRDVVKDLPTH 60 Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DFL++ S + + +PV FINE K+PG+K+GG + V EV L A +IP+ I VDL Sbjct: 61 VDFLRLRRTSRINLFIPVEFINEEKAPGVKKGGVVVHVRPEVELDVVAGDIPEKIVVDLA 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 IGD IH+ D+ LP+ + + IA I AP Sbjct: 121 GRDIGDVIHISDVELPQGAKPTVERDFVIANISAPSG 157 >gi|229915838|ref|YP_002884484.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sp. AT1b] gi|259646687|sp|C4L193|RL25_EXISA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229467267|gb|ACQ69039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sp. AT1b] Length = 215 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 3/178 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ + LRK G+ ++YG D PI D+ K L + ++ Sbjct: 4 KLQVSKRELRPRSLRTKLRKEGKALGVVYGYKVDSTPIVFDEMDLRKILR-DHGDNALIE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L ++ + + DP ++ H +F+ V V + + + G+K+GG Sbjct: 63 LHYDGNKINTLVHGSETDPFTNFYQHVEFMAVKMDEETEVEADIVLVG--DAKGVKEGGY 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L ++V++ NIP+ I +D+++L IGDS+ + D+ + +S+ ++ IA++ Sbjct: 121 LAQSLYKVTVAATPANIPERIELDVSELGIGDSVTVADLPEEKSYKIVSEPDMHIASV 178 >gi|226355167|ref|YP_002784907.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus deserti VCD115] gi|259646682|sp|C1CZB5|RL25_DEIDV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226317157|gb|ACO45153.1| putative 50S ribosomal protein L25 (General stress protein CTC) [Deinococcus deserti VCD115] Length = 239 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 12/185 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K + G IPA+ Y + AL K + ++ T + Sbjct: 1 MELNAKPRKSQEKLA------EGLIPAVAYNKD-NNISFALDRKAFDRAFRQQS-TTGLF 52 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G E + K Q+D IH DF V+ G + V VPV KS G G Sbjct: 53 DITVEGGETFPALVKTVQMDKRRRTPIHVDFYMVTYGEPIEVSVPVHTTG--KSQGEIMG 110 Query: 125 GKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G +++V H +S++ P IP +TVD++ L IGD I D++LPE + + + + Sbjct: 111 GLVDIVLHNLSIVAPGPRRIPQELTVDVSRLNIGDHITAGDVKLPEGCTLAVAADSVVIS 170 Query: 184 IVAPI 188 ++ P Sbjct: 171 VLPPR 175 >gi|225873665|ref|YP_002755124.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] gi|225791486|gb|ACO31576.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] Length = 220 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 5/159 (3%) Query: 30 IPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK--ELVHVIPKDYQLDPVS 87 IPA++YG P+ I L K I++ L+S+ +I L+IG + D+Q +P+ Sbjct: 30 IPAVVYGAAEPPQAIELDPKQITRILHSETGHNSIFDLEIGGVKTQTKAMIVDWQYEPIK 89 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDS 146 LIH D +++ + V VPV+ G+K QGG L+ V EV + C N+IP Sbjct: 90 GNLIHIDLKRIALDKPIRVSVPVQLTG--TPVGVKTQGGILDQVLREVEVECLPNDIPSH 147 Query: 147 ITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 I VD+ +L G + + D+ +K +S + T+A IV Sbjct: 148 IDVDITELAFGTILRVADLPHGDKLKYISDESNTVAHIV 186 >gi|256828485|ref|YP_003157213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] gi|256577661|gb|ACU88797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] Length = 196 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 6/193 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R++ GKG LR NG +P + Y + + + K + Sbjct: 1 MS-EVTSLQLTPREERGKGPCSRLRSNGLVPGVFYNAKGENISFVVENLALGKAFEKVRY 59 Query: 61 MTTI-LTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I L +++ + + + K PV H DF+ + V V +PV + + Sbjct: 60 SKMIELQIEVDGQLQTRNALFKKLVKHPVKRRYDHVDFIGIDLDKEVQVTIPVETVG--R 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+ GGKL ++ V + C IPDS+ V++ +L+IG + ++ + LPE ++ Sbjct: 118 AKGVVLGGKLEILEERVMVRCLPTAIPDSVVVEVTELEIGGKVLVDQLVLPEGVKAVYDR 177 Query: 178 NITIATIVAPISG 190 N + I Sbjct: 178 NFPVIAIQTARGA 190 >gi|89160905|gb|ABD62995.1| ribosomal protein L25 [Borrelia burgdorferi N40] Length = 189 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ ++K T+L L Sbjct: 31 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLIL 89 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 90 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGIL 147 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 148 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPS 189 >gi|37519968|ref|NP_923345.1| 50S ribosomal protein L25/general stress protein Ctc [Gloeobacter violaceus PCC 7421] gi|68053196|sp|Q7NNL2|RL25_GLOVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|35210960|dbj|BAC88340.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421] Length = 211 Score = 154 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 91/172 (52%), Gaps = 5/172 (2%) Query: 22 RLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIG-KELVHVIPK 79 R +R+ G+IPA++YG+ + + L + L TIL L + V+ + Sbjct: 17 RAMRREGRIPAVLYGHRGTQSLALELEQRTAEDLLKRVTINNTILPLKVERGWSGDVLLR 76 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLC 138 + Q D V L+H F V+ ++T+ +P+ F E + G+K GG L V ++++ Sbjct: 77 EVQHDAVGGKLLHLSFFAVAGHGSITLDLPLVFTGE--AVGVKMDGGLLEKVLTQLTVNT 134 Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 P ++P++I VD++ +++GD ++++D+ LP ++ ++ +A + +G Sbjct: 135 PPTDVPEAIEVDISTMQVGDMLYVKDLVLPPGIEVVNTPDLVVAHLTPSPTG 186 >gi|319441660|ref|ZP_07990816.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium variabile DSM 44702] Length = 216 Score = 154 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++A R + GKG+AR LR+ ++PA++Y N +P ++ + L + + Sbjct: 1 MATKIIDIAAQPRTEFGKGAARRLRRAWRVPAVVYANHQEPVHVSFDLLEFQGILRN-HG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ +D+ E + K + ++ + HAD L V TV V VPV E Sbjct: 60 VNALVDVDVDGEKHLALIKSVDQNVLTFDIDHADLLAVKRDETVEVDVPVIVEGEPTP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + V++ +IP+ +TV L +IGD I DI LP + S Sbjct: 118 ---GTEYIQDADTVTVEANVLSIPEELTVSLEGKEIGDQILAGDITLPAGVTLTSDAETL 174 Query: 181 IATIVAP 187 + AP Sbjct: 175 VVNFTAP 181 >gi|237752463|ref|ZP_04582943.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] gi|229375952|gb|EEO26043.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] Length = 178 Score = 154 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + K + I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGKENLHCAFKRNDFIREVKKKTDL--IFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + +G V VR I K G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQKGIEAKYSVKVRTIGTPK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + N+P ++++DL +GD + + D+ + + ++ I ++ Sbjct: 118 MMSKKRIKVKAAPENLPKDYEINVSDLDVGDVVLVRDLPAFNGVKIVERDDVAIVGVI 175 >gi|172057598|ref|YP_001814058.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sibiricum 255-15] gi|226736322|sp|B1YGY0|RL25_EXIS2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171990119|gb|ACB61041.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sibiricum 255-15] Length = 225 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + + LR G+ ++YG + PI+ K++ K + + + Sbjct: 2 SVTLKVEEREVRPRSLRKQLRHEGKALGVVYGYKVESTPISFDEKELVKVIR-DHGENVL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L IG + V+ + +D + + H +F+ V V + + E + G K G Sbjct: 61 VALQIGGKKVNTLINKLDMDIFTPTIKHVEFIAVKMDEETEVETDIVLVGE--AAGAKLG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+ +V++ + +P+ I VD+ +L IGDSI + D+ + +++ +I +A + Sbjct: 119 GFLSQTLFKVTVAATPDKLPERIEVDVTELAIGDSITVADLPEEKDFRVVTEGDIQVAAV 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|293567818|ref|ZP_06679159.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] gi|291589403|gb|EFF21210.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] Length = 202 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVVDLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|15805454|ref|NP_294150.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus radiodurans R1] gi|28948939|pdb|1NKW|T Chain T, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans gi|51247392|pdb|1SM1|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin gi|66361038|pdb|1YL3|V Chain V, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4. gi|88192275|pdb|2B66|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400 gi|88192338|pdb|2B9N|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf2, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400. gi|88192393|pdb|2B9P|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site. This File Contains The 50s Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site And Is Described In Remark 400. gi|6458107|gb|AAF10004.1|AE001902_4 general stress protein Ctc, putative [Deinococcus radiodurans R1] Length = 253 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 12/189 (6%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 D +L+A R K I A+ Y N + AL K + ++ Sbjct: 13 DTATMELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQS-T 64 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + + + G E + K Q+D IH DF V+ G V V VPV +S G Sbjct: 65 TGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTG--RSQG 122 Query: 121 IKQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 QGG +++V H + ++ P IP + VD+ + IGD I DI+LPE + + + Sbjct: 123 EVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPEL 182 Query: 180 TIATIVAPI 188 T+ +++ P Sbjct: 183 TVVSVLPPR 191 >gi|315453575|ref|YP_004073845.1| Ribosomal protein L25, ctc protein-like protein [Helicobacter felis ATCC 49179] gi|315132627|emb|CBY83255.1| Ribosomal protein L25, ctc protein homolog [Helicobacter felis ATCC 49179] Length = 178 Score = 153 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R K+ K + LRK G + A +YG+ D + L K T + Sbjct: 2 LEGQVRAKLSKSERKTLRKEGYLLANLYGHNVPNVYATFHTNDFIRFLKHK--PTLDFQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G++ V+ ++YQ DPVS+ L+H D L ++ G+ HVPV+ G+K G L Sbjct: 60 KVGEKAYQVVVQNYQKDPVSNALMHVDLLVLNTGAVSKFHVPVKV--HGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + C ++ S +D++ L +GD I + D+++P + N + ++ Sbjct: 118 MISKSRVQVACKPEDLISSFELDVSSLDVGDVILVRDLKVPASVKILENPNNAVVGVI 175 >gi|311746128|ref|ZP_07719913.1| ribosomal protein L25 [Algoriphagus sp. PR1] gi|126576349|gb|EAZ80627.1| ribosomal protein L25 [Algoriphagus sp. PR1] Length = 196 Score = 153 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K ++ R + + +R +G +P ++YG + A +Y+ Sbjct: 1 MKTLEIIGFKRANLDSATLNEIRDSGNVPCVVYGPGIPEQIHFYAPAILFRDLIYTPEVH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I +V + K+ Q PVS++L+HADF+ + + +PV+ SPG+ Sbjct: 61 --VVELNIEGTIVKAVLKEAQFHPVSEVLLHADFMAFTNDKPIKFEIPVKVSG--SSPGL 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GGKL + + A ++PD I D++ L +G S + +++ E ++ N+++ Sbjct: 117 AKGGKLEFKTRSLKVKGLAGDLPDYIEADISKLDLGKSFKVSELK-AEGFEILTSPNVSL 175 Query: 182 ATIVAPIS 189 TI P + Sbjct: 176 VTIGIPRA 183 >gi|320354572|ref|YP_004195911.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] gi|320123074|gb|ADW18620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] Length = 185 Score = 153 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 6/184 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + + +R GKG R LR PA +Y + + + + K L + + Sbjct: 3 QVNVESSVRTVFGKGPMRQLRMQSITPANLYSGGNKSVSLQVETAKLYKSLLFIHGRNAV 62 Query: 65 LTLDIGKE---LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +TL I + HV+ ++ Q PV+ L+H DFL++ VPV ++ + G+ Sbjct: 63 ITLKIEGDDKGERHVLVQEIQKAPVTGSLLHVDFLEIDLNKAAKFTVPVEYVG--TAKGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNIT 180 GG+L V V L +IPD I VD+ L+ G + I D+ LPEK + + + Sbjct: 121 DLGGELQVFRDSVQLRGCPLDIPDVIQVDITPLEQGGAGITYGDLPLPEKVEMLEKASTV 180 Query: 181 IATI 184 + Sbjct: 181 CVAV 184 >gi|160902897|ref|YP_001568478.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] gi|160360541|gb|ABX32155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] Length = 219 Score = 153 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 12/192 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 K++ RD K A+ R IPA +YG + K I + K++ L K TT+ Sbjct: 5 FKMNVNRRDSKVK--AKKFRNEKLIPAEVYGPALKENKHINIPYKELESML-EKVSETTL 61 Query: 65 LTLDIGKE----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ E K Q VSD IH DF EG + + +P+ F E G Sbjct: 62 IELNVKGEDSEEKFTCFVKSVQRHKVSDQPIHVDFYVPEEGRKMNLRIPLEFEGE--PIG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLN 178 + QGG LN HE+ + ++I DSI VD++ LK+G+S+ + DI+ LP+ S+ + Sbjct: 120 VTQGGYLNTYVHEIPVAILPSDIVDSIKVDISALKLGESLSVSDIKSLLPKSAESLLEDE 179 Query: 179 ITIATIVAPISG 190 + +++ P S Sbjct: 180 ELVISVIEPKSA 191 >gi|329943160|ref|ZP_08291934.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|332287742|ref|YP_004422643.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|313848313|emb|CBY17316.1| putative 50S ribosomal protein L25 [Chlamydophila psittaci RD1] gi|325506971|gb|ADZ18609.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|328814707|gb|EGF84697.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|328914996|gb|AEB55829.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila psittaci 6BC] Length = 185 Score = 153 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYQVTSYKVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI+LP ++ L + Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQLPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|282891672|ref|ZP_06300159.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498462|gb|EFB40794.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 186 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KNFMT 62 KL A R+ + + LR+ G+IPA+IY S + +++ + + L + T Sbjct: 1 MKLKAFKRNVEKRCNVNKLRREGKIPAVIYKKGSSGEELSVDSIMFTAALRKVEPGHLST 60 Query: 63 TILTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TI L+ VI K+ Q + + +IH DF ++ +G+ V V VP+ + PGI Sbjct: 61 TIFILEDENGAERRVIVKEIQYNVTNYDVIHLDFEELIDGTPVNVKVPIEIVGVADCPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG V + + C +IP S +D++ L +G+S + D+ + + L+ Sbjct: 121 KLGGVPRQVIRSLKVRCLPKDIPASFPIDISTLSLGESRRLSDLEIANTLRPLMNLSEVA 180 Query: 182 ATIV 185 IV Sbjct: 181 VAIV 184 >gi|197725521|gb|ACH72973.1| 5S rRNA-binding protein [Aquifex aeolicus] Length = 202 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ + R K + R+ G +P IYG + K ++ KD + + + F Sbjct: 1 MRRVKVKLLPRKPGRKSDLKRKRREGWLPVEIYGKGVENKHAWINVKDFASLPHGEAF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ E + KD Q + + IH D +S + V VP+ F+ G++ Sbjct: 59 -LIEAELDGETRVCLLKDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVG--TPAGVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG V H +++ P IP+ I VD++ L +G+++H+ DI PE + T+A Sbjct: 116 AGGTFEPVMHTLTIKAPPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDNPEETVA 175 Query: 183 TI 184 + Sbjct: 176 VV 177 >gi|154494974|ref|ZP_02033979.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] gi|154085524|gb|EDN84569.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] Length = 194 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVG-----KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 1 MKTFQLEGKSREVAATSADQKRALKAMRKNNEIPAVLYGGEKVS-HFTITKDSVRNLVYS 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + I KD Q PV+D ++H DFL+VSE V + VPV E Sbjct: 60 PEIF--VVELTIDGKKTMAIVKDIQFQPVTDAILHMDFLEVSENKPVVMEVPVVL--EGH 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKLN+ ++ + IP+ + ++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATI 184 N + + Sbjct: 175 NAVVCAV 181 >gi|295398795|ref|ZP_06808798.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] gi|294972963|gb|EFG48787.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] Length = 211 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A RD G +A+ LRK +P ++Y + DP I+LS D+ ++ + + ++ Sbjct: 1 MKFTAQKRDGAGTSAAKQLRKEDLVPGVVYASDLDPINISLSVSDVE-QIRRELGLNSVF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V ++ + + + + +G + + + + +NE+ + G Sbjct: 60 DLELDGKTHTVYVREISQSALKPTIYNISLQAIKKGQKLEMPLSIVIVNEDALA--DKEG 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + E++++ PDS+ VD+ L IGDS+ D++L ++ + I Sbjct: 118 VASTTTLEINVVADPATAPDSVEVDVTGLAIGDSVTAGDLKLASDIELVTDAEEVVVAIS 177 Query: 186 API 188 AP+ Sbjct: 178 APV 180 >gi|224418392|ref|ZP_03656398.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter canadensis MIT 98-5491] gi|253827710|ref|ZP_04870595.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313141923|ref|ZP_07804116.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|253511116|gb|EES89775.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313130954|gb|EFR48571.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] Length = 178 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + +K + I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGRENIHCAFKRNDFIREVKNKTDL--IFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ + H D + +G V VR + + G+K G L Sbjct: 60 EVGTQKYPVVIQEYQKDPITSEITHVDLMLAQKGVEAKYSVKVRIVG--IAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + N+P +++ DL +GD + + D+ + + ++ I ++ Sbjct: 118 MVSKKRIKVKAAPENLPKDYEINVTDLDVGDVVLVRDLPQNNGVKIVERDDVAIVGVI 175 >gi|224534151|ref|ZP_03674731.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] gi|224514576|gb|EEF84890.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] Length = 176 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + +++ + +K+ ++K T+L L Sbjct: 1 LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKINSSEFNKK-FAKFTDNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + + ++P++ I S G+K+GG L Sbjct: 60 DDGKFERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLIG--ASIGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 V+ +V + ++P+ I +DL + GD + ++D+ LP S N+ + I Sbjct: 118 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDRVLLKDLLLPSNVRLAESDENLEVVII 175 >gi|242309277|ref|ZP_04808432.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] gi|239524318|gb|EEQ64184.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] Length = 178 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + +K + I + Sbjct: 2 LSGIIRESISKADTKSLRKNGYLIANIYGKGRENIHCAFKRNDFIREVKNKTDL--IFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + G V VR + + G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQNGVEAKYSVKVRIVG--IAKGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + +P +++ DL +GD + + D+ E + + ++ I ++ Sbjct: 118 MVSKKRIKVKAAPEKLPKDYEINVTDLDVGDVVLVRDLPQNEGVKIVERDDVAIVGVI 175 >gi|28476663|gb|AAO44751.1| 50S ribosomal protein L25 [Tropheryma whipplei str. Twist] Length = 208 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR R G+IPA+ YG P+ + L A +S + N +L L Sbjct: 27 VEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQL 83 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G Sbjct: 84 KIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVT 138 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 139 SVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 195 >gi|301166403|emb|CBW25979.1| 50S ribosomal protein L25 [Bacteriovorax marinus SJ] Length = 204 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R++ + +RK G +P ++YG + + + I K L+ + + Sbjct: 5 LKTEWREE----PVKAIRKEGYVPGVVYGKGIESVNFKVPSIAIRKFLHHSG---KVFEV 57 Query: 68 DIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ V + Q D + D ++H F ++S TV +P+ F E + G K+GG Sbjct: 58 EVAGRGKHLVSLDNVQWDHMGDRMLHVSFHKISANEKTTVTLPIHFEGE--AAGKKEGGV 115 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 ++ V HEV + +IP+ I+VD+ L + ++DI P+ + + + Sbjct: 116 VHHVLHEVEVTGLPGDIPEFISVDITALGMHGHFSLKDIPCPKGLEWAHDVEANVVSCHP 175 Query: 187 PI 188 P Sbjct: 176 PK 177 >gi|317120947|ref|YP_004100950.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] gi|315590927|gb|ADU50223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] Length = 207 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 10/187 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L AV R+ G AR +R+ G IPA++YG P+ L A++ + L S + Sbjct: 2 QAVLRAVPREP---GHARRVRREGGIPAVLYGPSG-NFPVRLDAREFHRLLASGRARGVL 57 Query: 65 -LTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L + + K+ Q P L+H D +V E V VP+ ++ Sbjct: 58 TVELVRDGQTRQLSAMVKELQWHPARGDLLHVDLFEVREDEPVRAVVPIALTGTEEAE-- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + G + E+ + C IP + D+ +L +G+ + ++D+ +P + ++ + + Sbjct: 116 -KRGIVQHQLAELEIECLPRYIPPVVEADVANLPVGEEVRVKDLVVPPQVRVLNDPDEIV 174 Query: 182 ATIVAPI 188 A ++ P Sbjct: 175 AVLLPPK 181 >gi|94984577|ref|YP_603941.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus geothermalis DSM 11300] gi|166223677|sp|Q1J162|RL25_DEIGD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94554858|gb|ABF44772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Deinococcus geothermalis DSM 11300] Length = 241 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 12/185 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K + G IPA+ Y N A+ K + + T + Sbjct: 1 MELKATPRKSQEKLAP------GMIPAVAY-NKEKNVTFAIERKAFDRAFRQQ-GTTGLF 52 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + I G E + K Q+D IHADF V+ G V V VPV KS G QG Sbjct: 53 DIVIEGGETFPALVKAVQMDKRRREAIHADFYMVTYGEPVEVSVPVHTTG--KSQGEIQG 110 Query: 125 GKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G ++VV H ++++ P IP ITVD+ +L IGD + I+LPE + ++ + + Sbjct: 111 GLVDVVVHSLNVIAPGPRRIPQEITVDVTNLNIGDHVTAGQIKLPEGVKLAVEPDLVVLS 170 Query: 184 IVAPI 188 ++ P Sbjct: 171 VLPPR 175 >gi|62185394|ref|YP_220179.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila abortus S26/3] gi|81312456|sp|Q5L563|RL25_CHLAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|62148461|emb|CAH64231.1| putative 50S ribosomal protein L25 [Chlamydophila abortus S26/3] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V + +P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYHVTSYRVIHLDFEELIEDRDVKLKIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI++P ++ L Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQIPAGLRPITPLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|330443834|ref|YP_004376820.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] gi|328806944|gb|AEB41117.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] Length = 185 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKNFMT 62 +L R+ K + +R+ G IPA++Y + I + A K L S + Sbjct: 1 MELVVTRRETGKKSFLKKIRQTGGIPAVVYSSGKSIANITVDALVFKKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ L+ ++ + KD Q + + H DF ++ E V + +PVR +N G+K Sbjct: 61 TVFFLEYEGRVIKALVKDIQYQVTTYEVSHLDFEELVENRPVKLSIPVRCVNTVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +PE +S L Sbjct: 121 LGGSLRQVIRAIRVVCLPKDIVPFLELDVQSLGLSQTRKLSDIVIPEGIKPISSLREVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|227548215|ref|ZP_03978264.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079689|gb|EEI17652.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] Length = 226 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A R++ GKG+AR LR++G+IP ++Y + + ++ +++ + + + Sbjct: 1 MATTPPVVKAHKREEFGKGAARRLRRDGRIPGVLYESGIENVHFSVDRIEMTALVRN-DG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 IL LD+ + + + K + ++ + H D L V G VTV VPV E Sbjct: 60 TNAILRLDVDGKELLCMVKHVDQNVLTLEIDHIDLLGVKRGEKVTVEVPVVTEGEAVDDA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + A NIPD I V++ +IG+ I ++ LP S + Sbjct: 120 VVL-----QETDVLEIEVDALNIPDEIVVNIEGKEIGEQIVASEVVLPAGAELTSDPDAL 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVT 179 >gi|218262818|ref|ZP_03477176.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] gi|218223113|gb|EEC95763.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] Length = 194 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVG-----KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 1 MKTFQLEGKSREVAATSADQKRALKAMRKNNEIPAVLYGGEKVS-HFTITKDSVRNLVYS 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + I KD Q PV+D ++H DFL+VS+ V + VPV E Sbjct: 60 PEIF--VVELAIDGKKTMAIVKDIQFQPVTDAILHMDFLEVSDNKPVVMEVPVVL--EGH 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKLN+ ++ + IP+ + ++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATI 184 N + + Sbjct: 175 NAVVCAV 181 >gi|161486568|ref|NP_787782.2| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei str. Twist] Length = 186 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR R G+IPA+ YG P+ + L A +S + N +L L Sbjct: 5 VEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G Sbjct: 62 KIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVT 116 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 117 SVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 173 >gi|304439505|ref|ZP_07399413.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372013|gb|EFM25611.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 209 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 5/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L RD+ GK LR+ G +P ++Y + I + KD+ K Y +N ++ I Sbjct: 3 LKLQKRDQHGKNKVDKLRQEGLVPGVVYSKGEEAVSITVVEKDLVKA-YEENGLSNIFKA 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ ++ K+ Q P + ++H D + + V +PV + Q + Sbjct: 62 DLDGAQKDLLIKEIQKHPFKNQILHFDAYLIDMTQKIRVTIPVVLEGRDNIKA--QPSVI 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIATIV 185 + + + C ++P V++ D++IGD++ + D+ + EK +A + Sbjct: 120 MQIIDSIEIECLPGDLPSEAVVNVVDMQIGDNMTVADLDIAGNEKIHIHVDPEEVVAVLS 179 Query: 186 AP 187 P Sbjct: 180 EP 181 >gi|189485712|ref|YP_001956653.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226694582|sp|B1GYU9|RL25_UNCTG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170287671|dbj|BAG14192.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 239 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 KE L A R KG LRK+G+IPAI YG P+ IA+S+K + + N Sbjct: 1 MKEVILDAQARTVGSKGDLAFLRKSGKIPAIFYGKGIKPEAIAVSSKVFVSIMEA-NGAN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L+ I K D ++ IH DF +S + V VPV + G+K Sbjct: 60 VIINLNFKDGKKAAIVKSLDRDFLTQHTIHIDFHAISLEDKIEVLVPVHIAG--VADGVK 117 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG + + EV + NIP I+VD+ L+IG I + D+ + + + I Sbjct: 118 NFGGVMEFIVREVKVEAIPRNIPQKISVDVKALRIGQGITVADLPELDGVKYVQDSSTLI 177 Query: 182 ATIVA 186 ++A Sbjct: 178 VHVIA 182 >gi|168187378|ref|ZP_02622013.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169294743|gb|EDS76876.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 199 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K SAR RK G +P ++YG + ++++ + I Sbjct: 2 YVLKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVLKHGEYGGI- 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L I I K+ Q DPV+ ++H D ++ + + +P+ FI E K+G Sbjct: 61 DLQIDNNHHKAILKEVQKDPVTKKILHIDLQEIDKDEVIQTEIPINFIGEEFIA--KRGD 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + +NIP SI VD++ + GD + D+ + + + +N +A ++ Sbjct: 119 IVQKEKSNIKVQGKYDNIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMNTILAVVM 178 Query: 186 A 186 Sbjct: 179 G 179 >gi|89898001|ref|YP_515111.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila felis Fe/C-56] gi|109893353|sp|Q255S2|RL25_CHLFF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89331373|dbj|BAE80966.1| 50S ribosomal protein L25 [Chlamydophila felis Fe/C-56] Length = 185 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSVANIVVDAHVFSKFLSGLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRIIRALVKDIQYQVTTYQVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +P ++ L + Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPFLELDVRSLGLSQTRKLSDINIPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|307721573|ref|YP_003892713.1| 50S ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] gi|306979666|gb|ADN09701.1| LSU ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] Length = 178 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG + A + + + +K+ + + Sbjct: 2 LEGIVRESIGKKGTKALRRDGYLIANIYGKGLENINAAFKENEYIRTVRNKDTLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I ++V+ + Y+ PV+ L+H D + G VPV + E + G+K G + Sbjct: 60 SINGNEMNVVVQSYESHPVTGKLLHVDLMVAQPGVVTHYMVPVEPVGE--AIGVKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 NV + + ++P +I +D+ D+ +GD+ + DI E + + +I+ Sbjct: 118 NVSKRRLRVKAKIEDLPKTIVIDVTDMDVGDAKLIRDIDASENVKFTDADRVAVLSII 175 >gi|319956047|ref|YP_004167310.1| LSU ribosomal protein l25p [Nitratifractor salsuginis DSM 16511] gi|319418451|gb|ADV45561.1| LSU ribosomal protein L25P [Nitratifractor salsuginis DSM 16511] Length = 178 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A IY N D A + + + K + + Sbjct: 2 LEGIVRESIGKSNAKKLRRDGYLVANIYANGVDNVHAAFKQGEFIRTVRRKEKL--DFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +V+ ++YQL PV+ ++H D G VPV + GIK G L Sbjct: 60 KVGDTEYNVVIQEYQLHPVTGEIMHVDLRVAIPGHVTDYLVPVETVG--LPKGIKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + P IP T+D++DL +SI + DI PE M + ++++ ++ Sbjct: 118 VITKRRLRVRGPIEKIPAKFTLDVSDLDRDESILVRDIEAPEGCRLMDRPHVSVCGVI 175 >gi|68053203|sp|Q83FQ8|RL25_TROWT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 187 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR R G+IPA+ YG P+ + L A +S + N +L L Sbjct: 6 VEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G Sbjct: 63 KIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVT 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 118 SVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 174 >gi|257456706|ref|ZP_05621896.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] gi|257445899|gb|EEV20952.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] Length = 223 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E L+A R GK +A R+ ++PA+IY + I + +D K L+ + Sbjct: 12 MEERVLTACRRTGFGKAAAAKCRRASRLPAVIYDHTGHSTAIDVPYRDFEK-LFKTVTES 70 Query: 63 TILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T++T+ + ++ V KDYQ D VSD + HADF V G + + +R ++ Sbjct: 71 TLITVKVDEKDEYEVFIKDYQYDIVSDKVSHADFYAVERGQLLRTKIQIRLSGSPEA--C 128 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +QG L E+ + C ++P+ I V++ L ++IH+ DI++PE ++ ++ + Sbjct: 129 RQGAVLETGIAELEVECLPRDLPERIIVNVETLGANEAIHVRDIKVPEGVKILTDADLAV 188 Query: 182 ATI 184 A + Sbjct: 189 AMV 191 >gi|28572818|ref|NP_789598.1| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei TW08/27] gi|71153673|sp|Q83HD6|RL25_TROW8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28410951|emb|CAD67336.1| 50s ribosomal protein L25 [Tropheryma whipplei TW08/27] Length = 187 Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR R G+IPA+ YG P+ + L A +S + N +L L Sbjct: 6 VEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ + G Sbjct: 63 KIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQSYA-----GTVT 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 118 SVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKV 174 >gi|261416824|ref|YP_003250507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373280|gb|ACX76025.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326515|gb|ADL25716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 207 Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R LRK GQIPA+ YG + K I++S D+ K L + Sbjct: 1 MELTTLKAASRVLGANRDNARLRKAGQIPAVYYGKGIEAKNISVSEIDLRKVL-APGKRY 59 Query: 63 TILTLDIGKELVH-VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+L L+I + + + Q D ++ + H DF+++++ V V +PV+ G+ Sbjct: 60 TLLDLEIDGKAGNPALVYSVQKDALTQKITHVDFIKIADDEFVKVRIPVKLSG--LPVGV 117 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K QGG + + L +IP + +D+++ + + + +D +LPE + S Sbjct: 118 KTQGGLFSQEARYLMLAAKPASIPSVLELDISNFETNVTFYAKDFKLPENVTLASGPRTV 177 Query: 181 IATIV 185 I TI Sbjct: 178 IFTIS 182 >gi|150006997|ref|YP_001301740.1| 50S ribosomal protein L25/general stress protein Ctc [Parabacteroides distasonis ATCC 8503] gi|255015967|ref|ZP_05288093.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 2_1_7] gi|256841992|ref|ZP_05547497.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262384248|ref|ZP_06077383.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298377422|ref|ZP_06987375.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|301308837|ref|ZP_07214789.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] gi|166223700|sp|A6L8V4|RL25_PARD8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149935421|gb|ABR42118.1| putative 50S ribosomal protein L25 [Parabacteroides distasonis ATCC 8503] gi|256736308|gb|EEU49637.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262293951|gb|EEY81884.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298265836|gb|EFI07496.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|300833361|gb|EFK63979.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] Length = 194 Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVG-----KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ V K + + +RKN +IPA++YG ++ + + K +Y+ Sbjct: 1 MKTFELEGKGREIVARSADQKRALKAMRKNNEIPAVLYG-GEKVTHFTVTKEAVRKLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I I KD Q PV+D ++H DFL+VS+ V + VPV E Sbjct: 60 PEIF--VVELSIDGNKTMAIVKDMQFQPVTDEILHMDFLEVSKDKAVVMEVPVVL--EGH 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL++ ++ + + IP+ +T++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLSLQMRKLKVKAIYDQIPEKLTINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATI 184 N + + Sbjct: 175 NAVVCAV 181 >gi|45477205|sp|Q9RX88|RL25_DEIRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28948894|pdb|1NJM|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) And The Antibiotic Sparsomycin gi|28948900|pdb|1NJP|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) gi|29726807|pdb|1NWX|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 gi|29726838|pdb|1NWY|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin gi|61680355|pdb|1XBP|T Chain T, Inhibition Of Peptide Bond Formation By Pleuromutilins: The Structure Of The 50s Ribosomal Subunit From Deinococcus Radiodurans In Complex With Tiamulin gi|190613508|pdb|2ZJP|S Chain S, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613538|pdb|2ZJQ|S Chain S, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613569|pdb|2ZJR|S Chain S, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613676|pdb|3CF5|S Chain S, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282475|pdb|3DLL|S Chain S, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714559|pdb|3PIO|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714589|pdb|3PIP|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit Length = 237 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 12/185 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K I A+ Y N + AL K + ++ T + Sbjct: 1 MELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQS-TTGLF 52 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G E + K Q+D IH DF V+ G V V VPV +S G QG Sbjct: 53 DITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTG--RSQGEVQG 110 Query: 125 GKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G +++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T+ + Sbjct: 111 GLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVS 170 Query: 184 IVAPI 188 ++ P Sbjct: 171 VLPPR 175 >gi|225551705|ref|ZP_03772649.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] gi|225371732|gb|EEH01158.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] Length = 172 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 3/173 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R G +AR +R +IPA++YG +D + + + + +K+ ++K T+L LD GK Sbjct: 2 RSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKK-FAKFTDNTVLILDDGKL 60 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V KD + S ++ H DF +V + +VP++ I S G+K+GG L V+ Sbjct: 61 ERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASVGVKEGGILTVLKE 118 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +V + ++P+ I +DL + GD + +D+ LP I+ Sbjct: 119 QVKVRSLPLDLPEFIELDLTPVNKGDGVLFKDLVLPSNVRLAENDENLEVVII 171 >gi|109948223|ref|YP_665451.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter acinonychis str. Sheeba] gi|123066070|sp|Q17V74|RL25_HELAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109715444|emb|CAK00452.1| 50S ribosomal protein L25 [Helicobacter acinonychis str. Sheeba] Length = 178 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVSCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV++ + G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVKY--QGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|301092281|ref|XP_002996999.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] gi|262112188|gb|EEY70240.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] Length = 251 Score = 150 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 9/189 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK----PIALSAKDISKRLYS--KNFM 61 L V+R+ G ++R LRK G +P ++YG + K ++L + + + Sbjct: 33 LQLVVREGEGSRASRRLRKKGLLPGVLYGEGEEGKDERMLVSLPTRAFEREHRKLWTSIE 92 Query: 62 TTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +G V +D QLDPV+D+ + +FL+ G TV +P+ ++NE SPG Sbjct: 93 NQVFHVQVGDHPPVKAYMRDVQLDPVTDVPLAVNFLRFKPGR--TVSIPITYLNEEGSPG 150 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG +N + H + + IP ++ +D+N L +GD +++E I+ PE Sbjct: 151 LKRGGFINHIHHSLDCTIFTDKIPITLQIDVNGLHVGDKVYLESIKFPEGVVPNIPEGSL 210 Query: 181 IATIVAPIS 189 +A I Sbjct: 211 VAKIAGRRG 219 >gi|317011631|gb|ADU85378.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SouthAfrica7] Length = 178 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|187918701|ref|YP_001884204.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia hermsii DAH] gi|226736284|sp|B2S1C8|RL25_BORHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119861549|gb|AAX17344.1| LSU ribosomal protein L25P [Borrelia hermsii DAH] Length = 182 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 4/182 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD L R G AR +R +IPA++YG SD I + + + + + ++K Sbjct: 1 MDSSRI-LRYEGRLDFGSLRARRIRAESEIPAVVYGKESDVLHIKIKSSEFNNK-FAKFT 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L GK V KD + ++ H DF +V + + + ++F+ S G Sbjct: 59 DNTVLILSDGKIEKCVFIKDVSENLTKRLIYHVDFYEVDKTKDIERDIAIKFVG--ASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+V+ ++ + N+P+ + VDL +K GD + +DI LP+ + + Sbjct: 117 VKEGGTLSVLRTKIKVKSLPLNLPEFVEVDLTPVKKGDQVTFKDIVLPDNVKLSEENENS 176 Query: 181 IA 182 + Sbjct: 177 VV 178 >gi|206895312|ref|YP_002247107.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] gi|206737929|gb|ACI17007.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] Length = 211 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 7/171 (4%) Query: 8 LSAVMRDKV--GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + + R + G + +RKNG +PA++YG + P+ L + + + + L Sbjct: 3 VKVIKRTETQTGTRKVKKIRKNGYVPAVLYGQDMEATPLLLERSQV---IRERVTLGRSL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ ++V VI K+ Q+DP+S +IH DF +S GSTVTV +P+ + E GIK+GG Sbjct: 60 ELDVDGKIVRVIVKEEQVDPISQEVIHLDFQALSAGSTVTVSIPIVLVGE--PVGIKKGG 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 L E+ + P + + +TVD++++ IGD IH+ ++ LP + + Sbjct: 118 ILEFPTREIEVELPTEKLVEQVTVDVSNMDIGDIIHIGELDLPPEAKIFAD 168 >gi|118443386|ref|YP_877848.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium novyi NT] gi|118133842|gb|ABK60886.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 197 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 3/179 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + ++++ + I L Sbjct: 4 LKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVLKNGEYGGI-DL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I I K+ Q DPV+ ++H D ++ + + +P+ F+ E K+G + Sbjct: 63 QINNNHHKAIVKEIQKDPVTKKILHIDLQEIDKNEVIQTEIPINFVGEEFIA--KRGEIV 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP SI VD++ + GD + D+ + + + ++ +A ++ Sbjct: 121 QKEKSNIKVQGKYDDIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMDTILAVVMG 179 >gi|300088474|ref|YP_003758996.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528207|gb|ADJ26675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 217 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R+ GK R LR+ G P IYG+ + + + + + + + Sbjct: 1 MEKISLAVARRETTGKK-NRFLRRAGVTPCHIYGHSIASETVQADTAALEQVIAT-AGSS 58 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++L+ GK+ ++ Q PV + ++H DF QV + +P+ E S + Sbjct: 59 RLVSLEFKGKKPRMAFVREVQRPPVGNSILHVDFYQVKMTEKIAARIPLHLTGE--SAAL 116 Query: 122 KQGGK-LNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNI 179 K G+ L + + NIP S+TVD++ L+ + D+I++ D+ L + + ++ Sbjct: 117 KAKGRYLTNPIDHIEVESLPANIPASVTVDISVLETLDDAIYVSDLGLDKSVTLLTDPET 176 Query: 180 TIATIV 185 +A I Sbjct: 177 LVAKIA 182 >gi|261838770|gb|ACX98536.1| ribosomal protein L25 [Helicobacter pylori 51] Length = 178 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|208435364|ref|YP_002267030.1| ribosomal protein L25 [Helicobacter pylori G27] gi|226736329|sp|B5Z9B5|RL25_HELPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|208433293|gb|ACI28164.1| ribosomal protein L25 [Helicobacter pylori G27] gi|307638152|gb|ADN80602.1| LSU ribosomal protein L25p [Helicobacter pylori 908] gi|325996751|gb|ADZ52156.1| 50S ribosomal protein L25 [Helicobacter pylori 2018] gi|325998346|gb|ADZ50554.1| 50S ribosomal protein L25 [Helicobacter pylori 2017] Length = 178 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|15612454|ref|NP_224107.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori J99] gi|7674253|sp|Q9ZJC4|RL25_HELPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4156009|gb|AAD06970.1| putative ribosomal protein L25 [Helicobacter pylori J99] Length = 178 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGVENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|296272451|ref|YP_003655082.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] gi|296096625|gb|ADG92575.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] Length = 178 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K SA+ L+++G I A IYG + A D + L +K T + Sbjct: 2 LEGIVRDSITKQSAKQLKRDGYILANIYGKGVENINAAFKRNDFVRYLKNK--TTVAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ K+YQ P++ L+H D + G VPV E G+K G Sbjct: 60 KVGDTVCKVVVKEYQKAPITSELLHVDLMMALPGVKTNYLVPVTV--EGTPKGLKNKGLF 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V++ C N+P++ + ++DL GD++ + ++ +PE + I ++ Sbjct: 118 VFHKKRVAVKCTIENLPENFHIKISDLDTGDNVLVRNLTMPEGVDCYLDPRVPIVGVI 175 >gi|317013266|gb|ADU83874.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Lithuania75] Length = 178 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|15644375|ref|NP_229427.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga maritima MSB8] gi|7674238|sp|Q9X1W2|RL25_THEMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4982200|gb|AAD36694.1|AE001806_4 general stress protein Ctc [Thermotoga maritima MSB8] Length = 215 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS--KNFMTT 63 L A +R+ GK AR LR+ G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRRGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 64 ILTLDIGKELV---HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ D V V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVG--KPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|317179673|dbj|BAJ57461.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F30] gi|332674266|gb|AEE71083.1| 50S ribosomal protein L25 [Helicobacter pylori 83] Length = 178 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|291296896|ref|YP_003508294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] gi|290471855|gb|ADD29274.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] Length = 206 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R G LR G++P ++Y N + + + K+ +K + + Sbjct: 2 EYRIKAQTR---GNEKPAALRDAGKLPGVVY-NRQENYKVVVDLKEFNKVFLAAGIH-HV 56 Query: 65 LTLDIG-KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +TL++ + V + + LD H DF +S V + +P++ E + G+++ Sbjct: 57 ITLELENGKTVDTLVRQVNLDKRRRRPDHVDFYALS-DEPVLMWIPIKI--EGTAQGVRE 113 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L +V ++V + IP I VD++ L+IGDSIH ++RLP + + TI Sbjct: 114 GGVLQLVNNDVQVKVSPKAIPPHIEVDVSHLRIGDSIHANELRLPPGVTLAMNPSDTIVA 173 Query: 184 IVAP 187 IV P Sbjct: 174 IVPP 177 >gi|313683047|ref|YP_004060785.1| LSU ribosomal protein l25p [Sulfuricurvum kujiense DSM 16994] gi|313155907|gb|ADR34585.1| LSU ribosomal protein L25P [Sulfuricurvum kujiense DSM 16994] Length = 178 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + + R++G + A IYG + A D + + +K T + Sbjct: 2 LEGIVRESIGKAATKAYRRDGYLIANIYGKGLENVHAAFKMNDFIRTVRNKE--TVAFAV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++++ + Y+ PVS L+H D + G HVPV+ + G+K G L Sbjct: 60 KVDGKEMNLVVQGYESHPVSGNLLHVDLMVAQPGVVTHYHVPVKAVG--TPVGLKNKGML 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V + + N+P SIT+D+ L +GDS+ + D+ E + +++ +I+ Sbjct: 118 FVAKKRLRVKAAIENLPTSITIDVAPLDLGDSVLVRDLPRVENVTFTDSDRVSVLSII 175 >gi|213965445|ref|ZP_03393640.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] gi|213951829|gb|EEB63216.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] Length = 213 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 K+ A R + GKG+AR R G IP +IYG D PK I + D + + + + + Sbjct: 7 IKIEARNRTEFGKGAARRARVAGDIPVVIYGADLDAPKHILVDTLDFHAVIRN-HGVNAV 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++I E + K +P++ + HAD L + V V VPV E G Sbjct: 66 LDVNIEGESQLSMVKAVDQNPLTLDIDHADLLAIHRDEKVEVEVPVVPTGELAP-----G 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + + P IP+ I V + ++G +H D+ LPE ++ I I Sbjct: 121 ALLMQDAETILVNAPVLAIPEEIEVSVEGAEVGTMVHAGDVTLPEGLVLTDDADLLIFNI 180 Query: 185 VAP 187 V P Sbjct: 181 VEP 183 >gi|167044231|gb|ABZ08912.1| putative ribosomal L25p family protein [uncultured marine microorganism HF4000_APKG5H11] Length = 297 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 4/190 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ R+ +GK R LR+ G +P +YG +P+ + + + + L Sbjct: 80 MTTNAVEIELDPRELMGKKVGR-LRRAGIVPVHLYGPGMEPRALQCNTSQLIRVLAKAGG 138 Query: 61 MTTI-LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T I +T+ ++ Q DP D L+H D L VT VP+ + E+ + Sbjct: 139 ATPIHITIQGESGTHLAFAREIQWDPKRDDLLHVDLLAADISRPVTAQVPIILVGES-AG 197 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLN 178 G + V + +P I +D++ ++ DS I + D+ +PE + +S + Sbjct: 198 ARTVSGTVMHQLRTVDIQALPLEMPSQIELDISVMEEPDSVIRVSDLAIPENATLLSDVE 257 Query: 179 ITIATIVAPI 188 + I P Sbjct: 258 DLVVRIELPR 267 >gi|269302741|gb|ACZ32841.1| ribosomal protein L25, Ctc-form [Chlamydophila pneumoniae LPCoLN] Length = 185 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVQSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|322379486|ref|ZP_08053852.1| 50S ribosomal protein L25 [Helicobacter suis HS1] gi|322380467|ref|ZP_08054666.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321147112|gb|EFX41813.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321148093|gb|EFX42627.1| 50S ribosomal protein L25 [Helicobacter suis HS1] Length = 180 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R ++ K + +RK G + A +YG + D + + K + Sbjct: 4 LEGEIRGELSKSERKAVRKQGMLLANLYGRKTPNVYATFKINDFIRFVKHK--PNLDFMV 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 IG+ +V+ + YQ DP+S+ L+H D + + +G ++PV+ + GIK G L Sbjct: 62 KIGENAYNVVIQSYQKDPISNTLMHVDLMVLQKGVKSKFYIPVKI--HGVAVGIKNKGIL 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + H + + C ++ + +D+++L +GD+I + D+++P + N + ++ Sbjct: 120 MLSKHRIHVECTPEHLFSNFDLDVSNLDVGDAILVRDLQIPAHVKVLENPNNAVVGVI 177 >gi|298735534|ref|YP_003728055.1| 50S ribosomal protein L25 [Helicobacter pylori B8] gi|298354719|emb|CBI65591.1| large subunit ribosomal protein L25 [Helicobacter pylori B8] Length = 178 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKFKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|308809493|ref|XP_003082056.1| putative protein (ISS) [Ostreococcus tauri] gi|116060523|emb|CAL55859.1| putative protein (ISS) [Ostreococcus tauri] Length = 218 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 10/195 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTT-- 63 +L+ R GKG A R+ G++PA+++ S + + S ++++ + T Sbjct: 23 RLTCETRAGTGKGIAGRTRREGRVPAVLFRPGSVEKTLLTASERELNAAVRRHTLAGTQC 82 Query: 64 -ILTLDIGK-----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + L++ +V + K + + + + FL+V + V V VPV + E+ Sbjct: 83 EVFELEVTDGDGTPRIVRALAKQVHMHAYNKSVENVCFLEVEPETEVRVRVPVETLGEDV 142 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-Q 176 SPG+K+GG + ++ V + C +++IP TVD++ L G I + D+++ E + Sbjct: 143 SPGVKRGGFVQILRKTVPVKCRSDSIPKKFTVDVSALDAGKIIRIRDVKVAEGIKLLDAN 202 Query: 177 LNITIATIVAPISGS 191 L++ + I + + Sbjct: 203 LDLPLIIIAGKVKSA 217 >gi|15618858|ref|NP_225144.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae CWL029] gi|4377274|gb|AAD19087.1| General Stress Protein [Chlamydophila pneumoniae CWL029] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E + +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPIKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|188528267|ref|YP_001910954.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|226736330|sp|B2UVP2|RL25_HELPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|188144507|gb|ACD48924.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|297380649|gb|ADI35536.1| ribosomal protein L25, Ctc-form [Helicobacter pylori v225d] gi|308062760|gb|ADO04648.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Cuz20] gi|308064256|gb|ADO06143.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Sat464] Length = 178 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|210135663|ref|YP_002302102.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori P12] gi|226736328|sp|B6JNZ4|RL25_HELP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|210133631|gb|ACJ08622.1| 50S ribosomal protein L25 [Helicobacter pylori P12] Length = 178 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVI 175 >gi|317181179|dbj|BAJ58965.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F32] Length = 178 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|317014911|gb|ADU82347.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Gambia94/24] Length = 178 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|262341258|ref|YP_003284113.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272595|gb|ACY40503.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 211 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + R +R +G+IP I+YG P S + + K +Y+ Sbjct: 1 MKYVNIYGQKRN-VGKKAVRSIRLSGKIPCILYGKNI-NIPFLTSLESLKKIVYTTEVYG 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ ++ + ++ + K+ Q DP+SD ++H DF Q+ E + + +PV I + G+ Sbjct: 59 VIVQIEGYNKNINAVQKEIQFDPISDKILHVDFFQIDESKPLVLEIPV--IPFGRPIGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG+ ++ + +NIP+ I ++++ L IGD I +ED+ + ++ + IA Sbjct: 117 KGGEYYSPIRKLKIKAFPSNIPEYIKLNISSLDIGDRITVEDLYQDQYV-ILNPSHTLIA 175 Query: 183 TI 184 + Sbjct: 176 RV 177 >gi|108563842|ref|YP_628158.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori HPAG1] gi|217031842|ref|ZP_03437345.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254780006|ref|YP_003058113.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori B38] gi|308185266|ref|YP_003929399.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] gi|122980429|sp|Q1CRD8|RL25_HELPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|107837615|gb|ABF85484.1| ribosomal protein L25 [Helicobacter pylori HPAG1] gi|216946494|gb|EEC25096.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254001919|emb|CAX30172.1| 50S ribosomal subunit protein L25 [Helicobacter pylori B38] gi|261840172|gb|ACX99937.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 52] gi|308061186|gb|ADO03082.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] Length = 178 Score = 148 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|15836482|ref|NP_301006.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae J138] gi|16752081|ref|NP_445447.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|33242317|ref|NP_877258.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae TW-183] gi|12644491|sp|Q9Z6V7|RL25_CHLPN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7189823|gb|AAF38695.1| general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|8979323|dbj|BAA99157.1| general stress protein [Chlamydophila pneumoniae J138] gi|33236828|gb|AAP98915.1| general stress protein [Chlamydophila pneumoniae TW-183] Length = 185 Score = 148 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|15646105|ref|NP_208287.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 26695] gi|2500311|sp|P56078|RL25_HELPY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|2314675|gb|AAD08537.1| general stress protein (ctc) [Helicobacter pylori 26695] Length = 178 Score = 148 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VP++ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPIK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|300932604|ref|ZP_07147860.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium resistens DSM 45100] Length = 222 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 6/179 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L +R + GKG++R LR++ ++P ++YGN DP + + ++ L ++ ++ Sbjct: 5 TRLKGEVRTEFGKGASRRLRRDFRVPVVVYGNHLDPMHVHVDILELQAILRNEGV-NAVI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ K + ++ + HAD L V G V V V +N +PG + Sbjct: 64 ELEVEGQDHLVMIKAVDQNVLTLDVDHADMLNVKRGEKVEVEV-PVVVNGEPAPGAQVMQ 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + V +L +IP+ I V + +IGD I D+++P S +S+ + I + Sbjct: 123 DADFVL----VLADVLDIPEEIEVSVEGKEIGDQILAGDLQIPGNASLVSEEDTLIVNV 177 >gi|187776969|ref|ZP_02993442.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] gi|187775628|gb|EDU39430.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] Length = 178 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R+ G++P IIYG + + +++ + S+ + Sbjct: 3 KLFVEKRNC---KNSNKIRREGKVPGIIYGKNLNNLMFEVGEIELNSMI-SQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G V+ K+ Q DPV +IH D V + + + +P+ F + +K+GG Sbjct: 59 VNYGGADYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I +DL+ IG + + D+ L E + M L+ TIA+I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMIDLSQYNIGKTFRISDLELGEDITFMESLDSTIASI 175 >gi|317010130|gb|ADU80710.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori India7] Length = 178 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVI 175 >gi|331269172|ref|YP_004395664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329125722|gb|AEB75667.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 224 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 3/179 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + +++K + I + Sbjct: 27 LKAEERIKNSVHSARRERKKGMVPGVLYGAGMQNLLFEVGELELNKEILKHGEHGGI-NV 85 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI I K+ Q DPV+ +IH D +V+ V +P+ F K+G + Sbjct: 86 DINNRKHQAIVKEVQKDPVTKKIIHVDLQEVNNEEVVQTEIPIVFKGGELIS--KRGDTI 143 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP I +DL+ + GD + D+ + + + + ++ +A ++ Sbjct: 144 QKEKSNIKVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMSSEITCLDDMDTILAVVMG 202 >gi|154509584|ref|ZP_02045226.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] gi|153799218|gb|EDN81638.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] Length = 202 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 7/177 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ + ++ L Sbjct: 7 LLAEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV + E+ +PG Sbjct: 65 KIEGKTQLALVKDVQVHPVRRDILHADFLAVKAGEKVDVEVPVVVVGES-APGTVH---- 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + + PA +IP+S+ V + ++ G ++H+ D++LP I + Sbjct: 120 SVEEFTILVKAPATSIPESLEVSIEGVEAGSAVHVSDLKLPAGVEVELDPETVIVAV 176 >gi|315585883|gb|ADU40264.1| 50S ribosomal protein L25 [Helicobacter pylori 35A] gi|317178201|dbj|BAJ55990.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F16] gi|317182701|dbj|BAJ60485.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F57] Length = 178 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|163789595|ref|ZP_02184033.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] gi|159875127|gb|EDP69193.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] Length = 203 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++A++R +VG +A RK ++ A+I G P++L +KD+ L + I Sbjct: 1 MKVNAILRTEVGSAAANRDRKEKKVTAVINGKGITSTPVSLDSKDLDNVLKTL-GKNAIF 59 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + E VI K+ Q + + ++ + V +G +TV V + N +K+ Sbjct: 60 DVVVKDGETHQVIIKEIQSATLVNQILDVELQVVQKGEKLTVTVQINVENAEN---VKR- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ +E+ + NIP T+D L+IGDS+ + DI++ + + +S T+ ++ Sbjct: 116 GIVSQTLNELEIETLPANIPTEFTLDACALEIGDSLTVSDIKVDKSITVLSDPEQTVVSV 175 Query: 185 VAP 187 + P Sbjct: 176 LPP 178 >gi|153938247|ref|YP_001392394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152934143|gb|ABS39641.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland] gi|295320385|gb|ADG00763.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613] Length = 178 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P I+YG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIVYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|148381066|ref|YP_001255607.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153931183|ref|YP_001385439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153935360|ref|YP_001388846.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|148290550|emb|CAL84678.1| putative general stress protein [Clostridium botulinum A str. ATCC 3502] gi|152927227|gb|ABS32727.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152931274|gb|ABS36773.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] Length = 178 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F ++ +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDDLI--MKKGGIVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|170757176|ref|YP_001782751.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169122388|gb|ACA46224.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra] Length = 178 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|160879949|ref|YP_001558917.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] gi|189042350|sp|A9KSE6|RL25_CLOPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160428615|gb|ABX42178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] Length = 193 Score = 147 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 Q+ L+ V R KG+ +LLR NG +P I+G + IA+ + K + + Sbjct: 2 QETALLNMVPRTSTSKGANKLLRNNGYLPGNIFGKGMESISIAVKKDEFKKSIK-EYGRN 60 Query: 63 TILTL-DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L D + V+ K+ + P+ + + H +F VS + V + I Sbjct: 61 AVFKLVDTNNKEYTVMTKEITVAPLINEISHLNFQLVSLSEAIKQEVAFKIIGTEFLESK 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + LN V + ++IP + +D++ + GDS+ +DI+LPE +S + I Sbjct: 121 RL--LLNSHVDSVPVSGLPHDIPHELEIDVSSMNSGDSLLFKDIKLPEGITSDVDPELKI 178 Query: 182 ATI 184 T+ Sbjct: 179 ITV 181 >gi|254518677|ref|ZP_05130733.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226912426|gb|EEH97627.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 198 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+ RD +A+ LR+ G++P I+YG + + ++ + + SKN +L Sbjct: 3 NLNLNKRDSNISNNAKKLRRAGKVPGILYGKSLNDFMFEVGELELCREI-SKNGEHGVLD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D+ + KD Q DPVS +IH D ++ + + VP+ ++ E+ K+G Sbjct: 62 FDLNGCAHKALIKDVQRDPVSHKIIHLDLEELQQNQKIVSSVPIHYVGESHLG--KRGMV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C A+ +P + +++N G + D+ + + S + LN IA++ Sbjct: 120 LQKEKDSIRVECTADTLPKHVDININRSDDGYVYRVGDLEIASELSIIDDLNTVIASVS 178 >gi|297799630|ref|XP_002867699.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] gi|297313535|gb|EFH43958.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] Length = 257 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYS---K 58 + AV R GK + RK G++P+II+ + + + I++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +++ E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIVA 186 + + I + Sbjct: 233 LKLIKSKDEPIVKVAG 248 >gi|253681485|ref|ZP_04862282.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253561197|gb|EES90649.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 196 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 3/179 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P I+YG + +++K + + L Sbjct: 4 LKAEERVKDSVHSARRERKKGMVPGILYGAGIQNLLFEIGELELNKEILKHGEHGGV-NL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + I K+ Q DPV+ +IH D +V+ V +P+ F E K+G + Sbjct: 63 EINNKQHQAIVKEVQKDPVTKKIIHVDLQEVNNEEIVQTEIPIVFTGEELIS--KRGDTI 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + ++IP I +DL+ + GD + D+ + + + ++ +A I+ Sbjct: 121 QKEKSNIRVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMANEIICLDDMDTILAVIMG 179 >gi|225426106|ref|XP_002272347.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742259|emb|CBI34408.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 16/195 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + A+ R GK + RK G++P+I++ + + + I++ I K L Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G E V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPAL 233 Query: 172 SSMSQLNITIATIVA 186 + + + I+ Sbjct: 234 KLLRSKDEPVCKIMG 248 >gi|34811573|pdb|1PNU|T Chain T, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. gi|34811626|pdb|1PNY|T Chain T, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. gi|56966365|pdb|1VOR|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966418|pdb|1VOU|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966471|pdb|1VOW|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966524|pdb|1VOY|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966577|pdb|1VP0|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400 Length = 173 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K I A+ Y N + AL K + ++ T + Sbjct: 1 MELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQS-TTGLF 52 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G E + K Q+D IH DF V+ G V V VPV +S G QG Sbjct: 53 DITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTG--RSQGEVQG 110 Query: 125 GKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G +++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T+ + Sbjct: 111 GLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVS 170 Query: 184 IVA 186 ++ Sbjct: 171 VLP 173 >gi|168179611|ref|ZP_02614275.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226950546|ref|YP_002805637.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum A2 str. Kyoto] gi|182669554|gb|EDT81530.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226843949|gb|ACO86615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] Length = 178 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNSMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|15236554|ref|NP_194093.1| 50S ribosomal protein-related [Arabidopsis thaliana] gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis thaliana] gi|7269210|emb|CAB79317.1| putative protein [Arabidopsis thaliana] gi|18253005|gb|AAL62429.1| putative protein [Arabidopsis thaliana] gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis thaliana] gi|21594031|gb|AAM65949.1| unknown [Arabidopsis thaliana] gi|332659385|gb|AEE84785.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 264 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYS---K 58 + AV R GK + RK G++P+II+ + + + I++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +++ E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIVA 186 + + I + Sbjct: 233 LKLIKSKDEPIVKVAG 248 >gi|315226512|ref|ZP_07868300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] gi|315120644|gb|EFT83776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] Length = 223 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 9/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N + Sbjct: 20 DITLEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN---AL 76 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + GKE + ++ Q +PV + H DF +V G V V VPV K + Sbjct: 77 IEIKYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEVEVPVFVEGTPKGAAVAF- 135 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V + + +N+P+SIT++++ + G+ + +D+ LP+ + + ++ + Sbjct: 136 ----VDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQGSELAIEDPEESVVS 191 Query: 184 IVA 186 + Sbjct: 192 VTV 194 >gi|168181809|ref|ZP_02616473.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|237796572|ref|YP_002864124.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum Ba4 str. 657] gi|182675191|gb|EDT87152.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|229262239|gb|ACQ53272.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 178 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLSNLMFEVGEIELNNMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F + +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDELI--MKKGGVVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|322807425|emb|CBZ04999.1| ribosomal protein L25 general stress protein [Clostridium botulinum H04402 065] Length = 178 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNSMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + + +P+ F ++ +K+GG + + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILFSGDDLI--MKKGGIVQKEKNSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|29840577|ref|NP_829683.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila caviae GPIC] gi|71153132|sp|Q821W5|RL25_CHLCV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29834927|gb|AAP05561.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila caviae GPIC] Length = 185 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A K L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFGKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYQVTSYRVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +P ++ L + Sbjct: 121 LGGSLRQVIRAMRVVCKPKDIVPCLELDVRSLGLSQTRKLADINIPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|125526661|gb|EAY74775.1| hypothetical protein OsI_02667 [Oryza sativa Indica Group] Length = 271 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + +++ +K I K L Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 245 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 246 LKLLQSPEQPICSIIGSRA 264 >gi|297735240|emb|CBI17602.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 16/195 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + A+ R GK + RK G++P+I++ + + + I++ I K L Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G E V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPAL 233 Query: 172 SSMSQLNITIATIVA 186 + + + I+ Sbjct: 234 KLLRSKDEPVCKIMG 248 >gi|313902507|ref|ZP_07835908.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] gi|313467193|gb|EFR62706.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] Length = 210 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 10/187 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFM 61 + L AV R+ G AR +R+ G +PA++YG P+ L A++ + L ++ + Sbjct: 2 QAVLRAVPREP---GHARRVRREGGLPAVLYGPSG-NFPVRLDAREFHRLLASGRARGIL 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T L D + + K+ Q P L+H D +V E V VP+ ++ Sbjct: 58 TVELVQDGSTRSLSAMVKELQYHPARGDLLHVDLFEVREDEPVRAEVPIVLRGVEEAE-- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + G L E+ + ++P ++ D+ L +G+ + + D+ +P + ++ + + Sbjct: 116 -KRGILQHQLAELEIESLPRHMPAAVEGDVARLPVGEELRVRDLEVPAQVRVLNDPDEIV 174 Query: 182 ATIVAPI 188 A ++ P Sbjct: 175 AVLLPPK 181 >gi|217033872|ref|ZP_03439296.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] gi|216943635|gb|EEC23080.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] Length = 178 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + + +A+ L+K+G + A +YG + A K L K I + Sbjct: 2 LEGVIRESITRANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVI 175 >gi|308183599|ref|YP_003927726.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] gi|308065784|gb|ADO07676.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] Length = 178 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K I + Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNGAFKLNPFIKYLKEK--KHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ ++YQ +PV++ LIH D L V++G VPV+ ++ G+K G L Sbjct: 60 KLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVK--HQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +S+ C ++P VD+ L + +SI + D++ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPVHYLVDVAPLDVNESILVRDLKKHENVKILDHDSIAVIGVI 175 >gi|186701238|gb|ACC91264.1| 50S ribosomal protein [Capsella rubella] Length = 257 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYS---K 58 + AV R GK + RK G++P+II+ + + + +++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIRKLVTHLGYS 112 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +++ E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIVA 186 + + I I Sbjct: 233 LKLIKPKDEPIVKIAG 248 >gi|255537627|ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 252 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSK 58 + A+ R GK A RK G++P+I++ + + + I++ A I L Sbjct: 47 TIEAIPRATSGKSIAVKERKAGRVPSIVFEQENGQHGGNKRLISVQANQIRNMINKLGRS 106 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L++ E V V+P+ L +SD I+ F++ + + V VP+ Sbjct: 107 FFLSKLFNLEVRPEFGSDEIIEKVRVLPRLVHLHAISDTPINVTFIRAPSDAWLKVDVPL 166 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 + E+ SPG+++G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 167 VYRGEDVSPGLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPS 226 Query: 171 TSSMSQLNITIATIVA 186 + ++ + I+ Sbjct: 227 LKLIQPEDLPVVKIMG 242 >gi|115438116|ref|NP_001043461.1| Os01g0593500 [Oryza sativa Japonica Group] gi|113532992|dbj|BAF05375.1| Os01g0593500 [Oryza sativa Japonica Group] gi|125571028|gb|EAZ12543.1| hypothetical protein OsJ_02444 [Oryza sativa Japonica Group] Length = 271 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + +++ +K I K L Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 245 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 246 LRLLQSPEQPICSIIGSRA 264 >gi|218961881|ref|YP_001741656.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] gi|167730538|emb|CAO81450.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] Length = 188 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 5/167 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR +G IPA+IYG + +++ D ++ + +++ + H I KD Q+ Sbjct: 4 LRASGMIPAVIYGPELESISVSIPKGDFTQLYKKSFAEVSFWDIELNGDQFHTILKDKQI 63 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV+ ++H DF+ VS + + V VP+ E G+K+GG + +V V + C AN I Sbjct: 64 HPVTREMLHLDFMVVSAEAIIEVEVPIIITGE--PIGVKEGGMMEIVQRNVKISCKANEI 121 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVAPIS 189 PD +T+D+++LKIG+S+H+ D LP+ ++T+ I AP + Sbjct: 122 PDELTLDVSNLKIGESLHIRD--LPKGNWEVKEHSDVTLVAIHAPRA 166 >gi|260906161|ref|ZP_05914483.1| 50S ribosomal protein L25P [Brevibacterium linens BL2] Length = 213 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 6/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + KL A R + GKG+AR R+ G+IPA++YG+ DP I++ L N + I Sbjct: 3 DFKLIAEPRTEFGKGAARRTRRAGRIPAVVYGHGGDPVHISIDGHATMMALKHANALFEI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + D G + V I +D Q D V+ + H D + V G V V VPV I E+ G Sbjct: 63 ESTD-GAKNVLAIARDVQTDAVTREIEHLDLIIVKRGEKVEVDVPVHLIGESAP-----G 116 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + A +P+ I V ++ G+ + I L + + + + Sbjct: 117 TMVQQEESTILIKADATKLPEYIEVTIDGRAAGEHVLAGQIELASGIELAADPEMLVVNV 176 Query: 185 V 185 Sbjct: 177 S 177 >gi|294786876|ref|ZP_06752130.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] gi|294485709|gb|EFG33343.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] Length = 206 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 9/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N + Sbjct: 3 DITLEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN---AL 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + GKE + ++ Q +PV + H DF +V G V V VPV K + Sbjct: 60 IEIKYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEVEVPVFVEGTPKGAAVAF- 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 V + + +N+P+SIT++++ + G+ + +D+ LP+ + + ++ + Sbjct: 119 ----VDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQGSELAIEDPEESVVS 174 Query: 184 IVA 186 + Sbjct: 175 VTV 177 >gi|242057875|ref|XP_002458083.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] gi|241930058|gb|EES03203.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] Length = 264 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PA+++ + + +++ +K I K L Sbjct: 59 ILAVPRASSGRHVAAKERKAGRVPAVVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 118 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 119 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 178 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 179 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 238 Query: 171 TSSMSQLNITIATIVAPIS 189 + + I I+ + Sbjct: 239 LKLLQSPDQPICNIIGSRA 257 >gi|168211678|ref|ZP_02637303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] gi|170710354|gb|EDT22536.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] Length = 202 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ L S +L+ Sbjct: 3 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 62 INSQESSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 120 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 178 >gi|18310856|ref|NP_562790.1| general stress protein [Clostridium perfringens str. 13] gi|170764102|ref|ZP_02632078.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170764291|ref|ZP_02640532.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|182420441|ref|ZP_02641127.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] gi|182626124|ref|ZP_02953884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|71153135|sp|Q8XJ87|RL25_CLOPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|18145538|dbj|BAB81580.1| probable general stress protein [Clostridium perfringens str. 13] gi|170662463|gb|EDT15146.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170713646|gb|EDT25828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|177908561|gb|EDT71086.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|182382196|gb|EDT79675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] Length = 203 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ L S +L+ Sbjct: 4 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLS 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 63 INSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 121 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 179 >gi|226499442|ref|NP_001141875.1| hypothetical protein LOC100274018 [Zea mays] gi|194706262|gb|ACF87215.1| unknown [Zea mays] Length = 258 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + I++ A I K L Sbjct: 58 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSF 117 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 118 FLSRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 177 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + LCPA+ +P I VDL++L +G + M D+++ Sbjct: 178 MFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 237 Query: 171 TSSMSQLNITIATIVAPIS 189 + + I S Sbjct: 238 LKLLHSPDQPICNFTGSRS 256 >gi|150387890|ref|YP_001317939.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947752|gb|ABR46280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 200 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 5/180 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R++ G G A R+ G++PA++Y +P+ L+ K++ K L + I L Sbjct: 6 LKYTIREEAGTGGASKARRAGEVPAVLYSKGEVTQPVYLNTKELEKILSIYGGSSRI-AL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D + I K+ Q + + + L+H D ++ E + + +P+ +N+ + + + Sbjct: 65 DHEGKKCFAIIKEIQKNMLKNSLLHVDLQKLDENQKIRMTIPIYILNKEAVETLAE--IV 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIATIV 185 + EV + ++P+ I VD + LK ++ M+D+ + + L +AT+ Sbjct: 123 QIQQDEVEIQAYPRDLPEKIEVDASLLKDQANLTMKDLNIVGNTAIEILDDLENVVATLA 182 >gi|145352002|ref|XP_001420348.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580582|gb|ABO98641.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 239 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 16/199 (8%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSK-- 58 D + L +R G S+ R+ G++P +++ S+ I + ++++ + Sbjct: 33 DARGVVLRCALRVDGGTASSTRARREGRVPGVVFAPGSERGTMITVCEREMNAAVRKHTL 92 Query: 59 -NFMTTILTLDI-----------GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTV 106 + L++ V + K Q+ + ++ + FL+V + V V Sbjct: 93 AGVACEVFDLEVQTTTATGEESGETRRVRALAKQVQMHAYNQMVDNVCFLEVKPETEVKV 152 Query: 107 HVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR 166 VPV E+ SPG+K+GG + ++ V + C +++IP +D++ L G I + D+ Sbjct: 153 RVPVATQGEDVSPGVKRGGFVQIMRQTVPVRCRSDSIPKRFLMDVSTLDAGKVIKIGDVT 212 Query: 167 LPEKTSSMS-QLNITIATI 184 +PE + LN+ + I Sbjct: 213 VPEGVKLLDADLNLPLVRI 231 >gi|293189159|ref|ZP_06607884.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] gi|292821897|gb|EFF80831.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] Length = 202 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ + ++ L Sbjct: 7 LLAEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV + E+ +PG Sbjct: 65 KIEGKTQLALVKDVQVHPVRRHILHADFLAVKAGEKVDVEVPVVVVGES-APGTVH---- 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +V + + PA +IP+S+ V + ++ G ++H+ D+ LP I + Sbjct: 120 SVEEFTILVKAPATSIPESLEVSIEGVEAGSAVHVSDLLLPAGVEVELDPETVIVAV 176 >gi|110800820|ref|YP_696556.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens ATCC 13124] gi|123049713|sp|Q0TP84|RL25_CLOP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110675467|gb|ABG84454.1| 50S ribosomal protein L25 [Clostridium perfringens ATCC 13124] Length = 202 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ L S +L+ Sbjct: 3 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHAL-SVTGEHGLLS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 62 INSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 120 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 178 >gi|320335303|ref|YP_004172014.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] gi|319756592|gb|ADV68349.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] Length = 227 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 12/185 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A+ R K S G +PA+ Y + A+ K + + T + Sbjct: 1 MELKAIARTGQEKLS------EGYMPAVAY-HQGTNVMFAIERKAFDRAFRQQ-GKTGLF 52 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + I G E + K Q+D IHADFL V+ G V V VPV KS G G Sbjct: 53 DIAIEGGETFPALVKAVQMDKRKREAIHADFLMVTYGEPVQVDVPVHTTG--KSQGEIMG 110 Query: 125 GKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G ++VV H +S++ P IP I VD+ L IGD + DI LP+ S ++T+ + Sbjct: 111 GLVDVVVHNLSVIAPGPRRIPTEIAVDVTKLNIGDHVKAGDIALPDGVKLASDADLTVIS 170 Query: 184 IVAPI 188 ++ P Sbjct: 171 VLPPR 175 >gi|315641812|ref|ZP_07896816.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] gi|315482487|gb|EFU73026.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] Length = 204 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G+IPA++ G + I+L + +I K L ++ + T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKIPAVVNGYQIESTTISLDSAEIEKVLR-QHGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+ I + V+ + +Y D + L H +FL V+ V + ++ G++ G Sbjct: 61 LTMSIDGKKVNTLIHNYTTDTFTSKLTHIEFLSVNMNEVTEVE--AEVVLVGEAAGVRAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V++ + +P+++ VD+ DL+IG S+ + D+++ ++ + TI Sbjct: 119 GVLTQTLYSVTVAATPDKLPENVEVDVTDLEIGQSLSVADLKVDGDYEIITDAEEQVVTI 178 >gi|170760837|ref|YP_001788437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169407826|gb|ACA56237.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 178 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 4/167 (2%) Query: 19 GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIP 78 ++ +R++G++P IIYG + + +++ + S+ + ++ V+ Sbjct: 12 KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNSMI-SQVGEHGVTDINYEGTDYKVLI 70 Query: 79 KDYQLDPVSDILIHADFLQV-SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 K+ Q DPV +IH D V + + V +P+ F + +K+GG + V + Sbjct: 71 KEVQKDPVKKNVIHIDLENVTNSSNLVNAEIPILFSGDELI--MKKGGVVQKEKDSVKVR 128 Query: 138 CPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 129 CPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|38233497|ref|NP_939264.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium diphtheriae NCTC 13129] gi|71153137|sp|Q6NI77|RL25_CORDI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|38199757|emb|CAE49417.1| Putative 50S ribosomal protein L25 [Corynebacterium diphtheriae] Length = 205 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 7/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 ++A R++ GKG AR LR GQ+P +IYG + P +++ ++ + + + I Sbjct: 5 TTIAAQPRNEFGKGFARRLRVAGQVPGVIYGVDVEAPIHFSINRLEL-HAVLRAHGVNAI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E + K + ++ H D L + G V V VPV E +PG Sbjct: 64 IELDIEGEKHLTMIKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVVLTGE-TAPGTTLV 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +VV + +IP+ IT + L + + D+ +P TS ++ IA++ Sbjct: 123 QDADVVL----VEADVLSIPEEITFSVEGLDVDSKVLAGDLAMPANTSLVADAETVIASV 178 >gi|224053837|ref|XP_002298004.1| predicted protein [Populus trichocarpa] gi|222845262|gb|EEE82809.1| predicted protein [Populus trichocarpa] Length = 231 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSK 58 + A+ R GK + RK G++P+I++ + + + I++ I L Sbjct: 27 TIFAIPRSDSGKNVSAKERKAGRVPSIVFEQEDGQHGGNKRLISVKKNRIRNLVNELGRP 86 Query: 59 NFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + LD+ E V V+PK L +D ++ F++ + + V +P+ Sbjct: 87 FFLSRLFELDVRPQFESDEVIEKVRVLPKAIHLHAGTDEPLNVTFIRAPSHALLKVDIPL 146 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 F E+ SPG+++G LN + V +CPA+ IP I VDL++L +G + M D+++ Sbjct: 147 VFRGEDISPGLRKGAYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKVHPA 206 Query: 171 TSSMSQLNITIATIVA 186 + + + I Sbjct: 207 LKLVQSKELPVVKISG 222 >gi|291277022|ref|YP_003516794.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] gi|290964216|emb|CBG40065.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] Length = 178 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K + LR +G + A IYG + A D + + SK + + + Sbjct: 2 LEGKVRESISKAEVKALRNDGYLIANIYGKGVENIHCAFKLNDFIRTIKSKTHL--VFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +++ V+ ++YQ DPV+ ++H D + +G +PV+ + G+K G L Sbjct: 60 SVGGKMLDVVVQEYQKDPVTSNILHVDLMLAQKGVVAKYKIPVKAVG--VPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 VS+ ++ + +D++ L +GDSI + D+ M + ++ I ++ Sbjct: 118 IYPKKRVSVQAAPEHLINVYELDVSKLDVGDSILVRDLPEHPNIKVMEKPSVAIVGVI 175 >gi|169343699|ref|ZP_02864698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] gi|169298259|gb|EDS80349.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] Length = 203 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ L S +L+ Sbjct: 4 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHVL-SVTGEHGLLS 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 63 INSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 120 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 121 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 179 >gi|223889310|ref|ZP_03623897.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] gi|223885231|gb|EEF56334.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] Length = 163 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR +R +IPA++YG D + + + + +K+ ++K T+L LD GK V KD Sbjct: 1 ARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKK-FAKFTDNTVLILDDGKLERCVFVKD 59 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 + S ++ H DF +V + +VP++ I S G+K+GG L V+ +V + Sbjct: 60 VAENIASKLIYHIDFYEVDRNVELEKYVPIKLIG--ASIGVKEGGILTVLKEQVKVRSLP 117 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++P+ I +DL + GDS+ ++D+ LP I+ Sbjct: 118 LDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 162 >gi|168044236|ref|XP_001774588.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674143|gb|EDQ60656.1| predicted protein [Physcomitrella patens subsp. patens] Length = 206 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 102/200 (51%), Gaps = 15/200 (7%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIY----GN-MSDPKPIALSAKD---ISK 53 ++ E + R GK ++ R+ G++P+I++ G+ + + I++ K + K Sbjct: 5 EKAEEVILGFPRHGSGKIVSKKERRVGRVPSIVFSQENGHIGGNKQLISVETKQIERLIK 64 Query: 54 RLYSKNFMTTILTLDIGKE------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVH 107 RL +F+++ L++ + V+P+ L +D +++ F++ +++ V Sbjct: 65 RLGKSSFLSSTFDLEVYDDQGNVQAKERVLPRSIHLHAGTDKVMNVTFIRAPPTASLKVD 124 Query: 108 VPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 VP+ FI E+ PGI++GG + + V CP N+IP I VDL+ L +G+ I + D+ + Sbjct: 125 VPLIFIGEDACPGIRKGGYIYTMMRTVKYRCPGNSIPSGIEVDLSTLDMGEKILLRDLNV 184 Query: 168 PEKTSSM-SQLNITIATIVA 186 P + + ++ + ++ Sbjct: 185 PSELRLVKKDSSLPVCKVMG 204 >gi|167948535|ref|ZP_02535609.1| 50S ribosomal protein L25/general stress protein Ctc [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 148 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 54/100 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++A R GKG++R LR+ G +P IIYG +P I+L+ ++ L + F + I Sbjct: 21 SFEITAQPRSDTGKGASRRLRRTGMVPGIIYGGHQEPSMISLAHNELILHLDHEAFYSHI 80 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 L L +G V+ KD Q P ++H DF ++S G + Sbjct: 81 LNLKVGDATEQVVLKDLQRHPAKPFIMHIDFQRISAGEKI 120 >gi|302387238|ref|YP_003823060.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] gi|302197866|gb|ADL05437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] Length = 196 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 5/187 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ ++ +R KG L++ G + I G D IA+ KD+ +R + Sbjct: 1 MENTGV-MNVELRKSTRKGDNNQLKREGYLLGNIAGKGVDSISIAVK-KDVFRRSMKEFG 58 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L + + V+ K+ ++PV + + H DF VS + V ++F Sbjct: 59 RNGVFKLVVPDGQSYTVMAKEIHIEPVKNEISHLDFQMVSFSEKIKQEVAIKFTGAELLE 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + +N + L +IPD I +D+++++ G+SI DI+LPE +S Sbjct: 119 SKRL--LINSTIDSILLEGLPQDIPDEIEIDVSNMEAGESIQFSDIKLPEGLTSTIDPEQ 176 Query: 180 TIATIVA 186 + T+V Sbjct: 177 KMITVVG 183 >gi|78776666|ref|YP_392981.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurimonas denitrificans DSM 1251] gi|109893404|sp|Q30TD5|RL25_SULDN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78497206|gb|ABB43746.1| LSU ribosomal protein L25P [Sulfurimonas denitrificans DSM 1251] Length = 178 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG A + + + +K ++ + Sbjct: 2 LEGIIRESIGKKGTKALRRDGYLIANIYGKGLQNLHAAFKENEYIRTVRNKETLS--FPI 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ + Y+ PV+ L+H D + HVPV + E + G+K G + Sbjct: 60 KVDSKEMNVVVQAYEAHPVTGKLLHVDLMVAQPNVVTHYHVPV--VTEGDAIGLKNKGLI 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ + + N P+SI VD+ + +GD+ + DI + +++ +++ Sbjct: 118 HISKPRLRVKATIENTPNSIVVDVTKMDVGDAKMVRDIAKIANVTFTDADRVSVLSVI 175 >gi|326803940|ref|YP_004321758.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] gi|326650944|gb|AEA01127.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] Length = 210 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A RD G +++ LR+ +P ++Y + DP I++ D+ K + ++ Sbjct: 2 MKFVAKTRDAAGTSASKALRREDLVPGVVYASDLDPIKISMERPDVEK-IERDLGTNSVF 60 Query: 66 TLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L+I + V ++ + I+ + + +G + V+VPV + E K Sbjct: 61 ELEIEGQGSRTVFLREISRAAIKPIVYNISLQAIKKGEKLEVNVPVSIVGEEKLA--NPA 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIA 182 G + +EV+L P+ TVD++ L I DS+ +++ E ++ I Sbjct: 119 GVAAINVYEVTLRIDPAKAPEYFTVDVSGLDINDSVTAGEVKFEGMEDAELITDPEEVIV 178 Query: 183 TIV 185 ++ Sbjct: 179 SVS 181 >gi|115462913|ref|NP_001055056.1| Os05g0270000 [Oryza sativa Japonica Group] gi|55168097|gb|AAV43965.1| unknown protein [Oryza sativa Japonica Group] gi|113578607|dbj|BAF16970.1| Os05g0270000 [Oryza sativa Japonica Group] gi|125551610|gb|EAY97319.1| hypothetical protein OsI_19240 [Oryza sativa Indica Group] gi|215704308|dbj|BAG93148.1| unnamed protein product [Oryza sativa Japonica Group] Length = 265 Score = 143 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + +++ +K I K L Sbjct: 60 ILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 119 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 120 FLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 179 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 180 MFIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 239 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 240 LKLLQSPEQPICSIIGSRA 258 >gi|330887871|gb|EGH20532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 143 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 5/130 (3%) Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 1 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 58 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 59 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 118 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 119 LAIANVHAPR 128 >gi|325283580|ref|YP_004256121.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] gi|324315389|gb|ADY26504.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] Length = 238 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 12/183 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A R K G IPA+ Y N A+ K K ++ + ++ + + Sbjct: 3 INAKARKSGDKLE------QGMIPAVAY-NKEKNVSFAIERKVFDK-IFREQGISGLFDI 54 Query: 68 DIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 I E + K Q+D IH DF V+ G + VP+ KS G +GG Sbjct: 55 SIDGAEAFPALVKTVQMDKRRREPIHVDFYMVTYGQAIEASVPLHTTG--KSQGEIEGGL 112 Query: 127 LNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++V H V++L P IP I DL+ L IGD I ++LPE I + +I+ Sbjct: 113 VDIVHHNVTVLAPGPRRIPQEIVADLSGLNIGDHIAAGQLQLPEGVELAMDPEINVISIL 172 Query: 186 API 188 P Sbjct: 173 PPR 175 >gi|313887551|ref|ZP_07821234.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846429|gb|EFR33807.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] Length = 211 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL RD GK LR NG+IP ++Y + + ++ KD+ K YS+ + I Sbjct: 1 MKLVLNKRDAKGKNKVDKLRANGEIPGVLYSKGKEARMVSGLEKDLLKA-YSQEGYSNIF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +DI E V+ K+ Q+ + + ++H D ++ + ++V VP+ ++ Q Sbjct: 60 DIDIDGETTSVLFKEVQMHHIKNAMVHFDLYEIDMNTEISVEVPIVLEGRDEVK--VQPS 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMS-QLNITIA 182 L V +EV++ C +P V++ +++IG++ + D+ + E + + +A Sbjct: 118 SLIQVLNEVTVTCLPKYLPSEAIVNVVEMQIGETKTIADLDIFGDENIKIEHLEADEAVA 177 Query: 183 TIV 185 T+V Sbjct: 178 TLV 180 >gi|224096802|ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|222853645|gb|EEE91192.1| predicted protein [Populus trichocarpa] Length = 261 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---MSDP--------KPIALSAKD 50 + + A+ R+ VG + R+ G+IPA+++ +P + + K Sbjct: 27 SSRYHTIQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQ 86 Query: 51 ISKRLYS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVS 99 I L S F +T L I E V+P D + +++ F Sbjct: 87 ILAILKSVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWAD 146 Query: 100 EGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS 159 EG+ + V VPV F E PG+K+GG L ++ + LCPA +IP I VD+++L I D Sbjct: 147 EGTEMKVDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDG 206 Query: 160 IHMEDIRLPEKTSSMS-QLNITIATIVA 186 + M DI + +S N+ + IVA Sbjct: 207 LFMRDIEVHSSLKLLSKNENMPVCKIVA 234 >gi|255086031|ref|XP_002508982.1| predicted protein [Micromonas sp. RCC299] gi|226524260|gb|ACO70240.1| predicted protein [Micromonas sp. RCC299] Length = 226 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 7/192 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYS--- 57 D K + + R GK + LR++G +P +++G + + + +D+ + + Sbjct: 32 DLKGDNIDVMPRTGTGKTVTKRLRRDGLVPGVLFGPGDQTGELLQMPKQDVERLVRIYGL 91 Query: 58 KNFMTTILTLD--IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 ILTL+ G V+ K D + + + +F+ + V V VPVR + Sbjct: 92 SGIGARILTLNFPDGVRKQDVLAKQVIYDATNINVENVNFMPCGPETEVKVKVPVRVEGD 151 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-M 174 + PGIK+GG + +++ C +IP I +++ + +GD + + D+ +PE M Sbjct: 152 DACPGIKKGGFAWKLHKTLTVTCKGKDIPSEIVSNISAMDVGDKVFLRDLDIPEGVRVHM 211 Query: 175 SQLNITIATIVA 186 + + I I Sbjct: 212 TDDKVPIIKIAG 223 >gi|320095754|ref|ZP_08027401.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977310|gb|EFW09006.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] Length = 197 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 7/177 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG++R R+ +IPA++YG+ +DP I + D+ + ++ L Sbjct: 7 LIAETRTEFGKGASRRARRAAKIPAVLYGHGADPVHIDVPGHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + + K+ Q+ PVS L+HADFL V G V V VPV E+ +PG Sbjct: 65 KVDGKSQLALVKEVQVHPVSRNLLHADFLAVKAGEKVDVEVPVVVDGES-APGTAH---- 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + A IP+ + V + L+ G ++ + D+ LP I +I Sbjct: 120 TIEEFTILVKASATAIPEDLKVSIEGLEAGSAVRVADLVLPAGVEVELDPEQIIVSI 176 >gi|255562637|ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 253 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---MSDPKPIALSAKDISKRLYS----- 57 + A+ R+ G A R G+IPA+++ +P ++S K + Sbjct: 27 HTIQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQSI 86 Query: 58 ------KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 F +T L I E ++P D + +++ F+ +G+ Sbjct: 87 LTSVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIKVHRDEETGKILNLVFVWADDGTE 146 Query: 104 VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHME 163 + V VP+ F E PG+K+GGKLN + + +LCPA +IP + VD++ L IGD + M Sbjct: 147 LKVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVSMG 206 Query: 164 DIRLPEKTSSMS-QLNITIATIV 185 D+ + +S NI I IV Sbjct: 207 DVEVHPSLKLLSKNENIPICKIV 229 >gi|145687759|gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana] Length = 251 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 16/196 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSK 58 + A+ R K GK A RK G++P+I++ + + + I++ A I K L Sbjct: 46 TIHAIARAKSGKNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRS 105 Query: 59 NFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 +F++ + L++ E V V+P+ L+ SD ++ F++ + + V VP+ Sbjct: 106 HFLSRLFDLEVRPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPL 165 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 F E+ SPG+K+G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 166 IFRGEDVSPGLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPA 225 Query: 171 TSSMSQLNITIATIVA 186 + + + I+ Sbjct: 226 LKLVQPKDHPVVKIMG 241 >gi|225470469|ref|XP_002263685.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 251 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 24/205 (11%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY------GNMSDPKPIA------LSAKDISK 53 + A+ R+ G + R G+IPA+++ G + + ++ K I Sbjct: 34 HTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNMNGRSVSRKRLLTTERKQIQA 93 Query: 54 RLYS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 L S + +T L I E V+P D + +++ F EGS Sbjct: 94 ILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWADEGS 153 Query: 103 TVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD I M Sbjct: 154 ELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILM 213 Query: 163 EDIRLPEKTSSMSQLNI-TIATIVA 186 D+ + +S+ + IVA Sbjct: 214 HDVEVHPSLKLLSKNETMPVCKIVA 238 >gi|302144151|emb|CBI23278.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 24/205 (11%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY------GNMSDPKPIA------LSAKDISK 53 + A+ R+ G + R G+IPA+++ G + + ++ K I Sbjct: 34 HTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNINGRSVSRKRLLTTERKQIQA 93 Query: 54 RLYS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 L S + +T L I E V+P D + +++ F EGS Sbjct: 94 ILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWADEGS 153 Query: 103 TVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 + V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD I M Sbjct: 154 ELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILM 213 Query: 163 EDIRLPEKTSSMSQLNI-TIATIVA 186 D+ + +S+ + IVA Sbjct: 214 HDVEVHPSLKLLSKNETMPVCKIVA 238 >gi|309789906|ref|ZP_07684483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] gi|308228038|gb|EFO81689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] Length = 199 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 7/164 (4%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVH 75 GK + LR +G IP IYG + +SA++ ++ K TT++ L+IG + V Sbjct: 2 FGKK-VKYLRSSGIIPCTIYGKGFEAVSAQVSAREFD-LVFRKAGRTTLIDLNIGSQGVS 59 Query: 76 -VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG-GKLNVVCHE 133 V +D Q PVS ++H DF V V V VPV + E SP + +G LN Sbjct: 60 AVFVQDIQRHPVSRAILHIDFKVVDLKKLVHVEVPVIAVGE--SPLVARGDALLNHPLSM 117 Query: 134 VSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQ 176 V + N++P I +D+ L D +IH+ D+ ++ Sbjct: 118 VMVEALPNDLPQHIEIDVTCLDAMDKAIHVRDLAAQTGYKILND 161 >gi|152993638|ref|YP_001359359.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurovum sp. NBC37-1] gi|151425499|dbj|BAF73002.1| 50S ribosomal protein L25 [Sulfurovum sp. NBC37-1] Length = 178 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A +Y N + A + + + +K+ + + Sbjct: 2 LEGIVRESIGKTTAKKLRRDGYLTANLYANGVENIQAAFKRGEFMRAVRNKDSLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQL PV ++H D G VPV + G+K G L Sbjct: 60 KVGDKELNVVIQEYQLHPVHGEVVHVDLRITVPGQVTDFLVPV--VTHGTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + N+P +++ L DS+ + DI +P M + ++ + ++ Sbjct: 118 VMSKRRVKVRGAIENMPAKFDLNVEPLNRDDSLLIRDIEVPANCKMMDRPDVAVCGVI 175 >gi|315604958|ref|ZP_07880014.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313353|gb|EFU61414.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 197 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 7/177 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ ++P ++YG+ ++P+ + + D+ + ++ L Sbjct: 7 LLAEERTEFGKGAARRARRAAKVPTVLYGHGAEPRHLDVPEHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV E G Sbjct: 65 KIAGKTQLALVKDVQVHPVRRNILHADFLAVKAGEKVDVEVPVVVTGEPVP-----GTVH 119 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ +++ PA IP+S+ V + ++ G ++ + D+ LP I ++ Sbjct: 120 SLEEFTIAVKAPATAIPESLEVSIEGIEAGSAVRVADLALPSGVEVELDAETVIVSV 176 >gi|166033562|ref|ZP_02236391.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] gi|166026747|gb|EDR45504.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] Length = 193 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + A + + L + N + I+ Sbjct: 3 TLKAEKRTLAVK--AKKLRREGYVTGNVFGKEMKESIPVKMDAAAVDRLLKTSNKGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI E +V+ K+ +P+ + DF + + V + +N +K + G Sbjct: 61 -LDIDGESHNVLIKEVDYNPLKGRVDEMDFQALVKDEVVHSVAEIVLVNHDK----LESG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L EVS + + D + +D+ L+IGD+I ++D+ L + ++ T+ T Sbjct: 116 VLQQQLEEVSYKALPSALVDKVEIDVAKLRIGDTIKVKDLSLAQDKDVHLVTDPETTVVT 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|255527375|ref|ZP_05394251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296185632|ref|ZP_06854041.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255508947|gb|EET85311.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296049760|gb|EFG89185.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 195 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFM 61 ++ L+A R K K R+ G IPA+IYG+ ++ +P+ + K L +K+ Sbjct: 1 MEQIILNAEKRTKETK----KFREEGFIPAVIYGDCVAKSEPVKFEKMPLMKIL-AKHGS 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + G + K+ Q PVS+ +IH D VS+ V V VP+ F E Sbjct: 56 NVKLWIKRGDDKKFGFIKEIQRHPVSNKIIHLDVQLVSKDHEVKVQVPITFNGEEALA-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K +L + EV +L + IP+ I ++++ GDSI ++D+ L ++ + N Sbjct: 114 KNQLQLQIQKPEVDVLGKIDLIPEVIHINVSGKNAGDSITLKDLNLDKQLKIHDKENEIY 173 Query: 182 ATIV 185 ATI Sbjct: 174 ATIT 177 >gi|82523964|emb|CAI78775.1| ribosomal protein L25 [uncultured epsilon proteobacterium] Length = 192 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K LR++G + A IYG A + + + +K ++ + Sbjct: 16 LQGIIRESISKSGTNALRRDGYLIANIYGKGIANINAAFKENEYIRTVRNKETLS--FPV 73 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + ++V+ + Y+ V+ L+H D + G H+PV + + G+K G + Sbjct: 74 SVNGSEMNVVVQSYESHAVTGRLLHVDLMIAQPGVVTHYHIPV--TTKGIALGLKNKGLV 131 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+ + + N+P+SI VD+ + +GDS + D+ + + + + +I+ Sbjct: 132 NISKSRLRVKAAIENVPNSIVVDVTPMDVGDSRLIRDLPKIQNVTFTDSDRVAVVSII 189 >gi|297183229|gb|ADI19369.1| ribosomal protein l25 (general stress protein ctc) [uncultured Chloroflexi bacterium HF0500_03M05] Length = 219 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 10/192 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD KLS R+ GK + LR+ G +P +G + + + + A+ + + + S Sbjct: 1 MDTLNLKLS--PREVKGKK-VKRLRQAGVVPVHFFGGDIESQALQVEARVLRRLVKS-AG 56 Query: 61 MTTILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T+++ + ++ Q PV++ L+H DFL+V TVT +VP+ I + + Sbjct: 57 TNIPITVEVEGQDGENICFIREVQRHPVTEDLLHVDFLRVDVSQTVTANVPI--ILDGSA 114 Query: 119 PGIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKI-GDSIHMEDIRLPEKTSSMSQ 176 P ++ GG L + + NIP +I VD++DL SI + D+++ + ++ Sbjct: 115 PAVENSGGTLIQPLQTLVVESLPMNIPAAIHVDVSDLDDFEKSIRVRDVQVSSGVTLLAD 174 Query: 177 LNITIATIVAPI 188 L I ++ P Sbjct: 175 LGEMITRVLPPR 186 >gi|170758871|ref|YP_001788537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169405860|gb|ACA54271.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 189 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + K L +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESMKVKFEVPSLLKYL-NKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + +P+ I V++ + + GD+I + DI+L E + + Sbjct: 114 HKGFLLEEFTPYIEVAGKVGILPEIIVVNVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|307103465|gb|EFN51725.1| hypothetical protein CHLNCDRAFT_139900 [Chlorella variabilis] Length = 239 Score = 138 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 9/178 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDISKR---LYSKNFM 61 L+A R VG ++ LRK G+ P I++ G + +A +K + K L + Sbjct: 49 LTLAAEERGLVGSIASNKLRKAGKTPGIVFSGPGGEQHLLAFDSKALGKLVTKLGRTAWA 108 Query: 62 TTILTLDIGKE-----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ L I E V + + + +D + + F+ V V VP++ I E+ Sbjct: 109 CSVFDLQIQGEDGSSRTVRALGRQVHMTSTTDAVENVTFVFCPPERQVRVEVPLKVIGED 168 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 SPGIK GG++N + + L ++IP TVD++ +++ D ++ D+ +P+ Sbjct: 169 VSPGIKGGGRVNWIRRTIPCLARGDSIPRDFTVDISKMELNDKLYFTDLAVPQGAVLH 226 >gi|332659386|gb|AEE84786.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 277 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYS---K 58 + AV R GK + RK G++P+II+ + + + I++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDY-------------QLDPVSDILIHADFLQ 97 F++ + +++ E V +P+ L +D ++ F++ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIR 172 Query: 98 VSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG 157 G+ + V +P+ FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG Sbjct: 173 APPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIG 232 Query: 158 DSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + M D+++ + + I + Sbjct: 233 QKLVMGDLKVHPALKLIKSKDEPIVKVAG 261 >gi|148381166|ref|YP_001255707.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153932176|ref|YP_001385541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153937600|ref|YP_001388947.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|168179133|ref|ZP_02613797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|168183534|ref|ZP_02618198.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226950645|ref|YP_002805736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|237796673|ref|YP_002864225.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] gi|148290650|emb|CAL84779.1| putative ribosomal L25p family protein [Clostridium botulinum A str. ATCC 3502] gi|152928220|gb|ABS33720.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152933514|gb|ABS39013.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] gi|182670001|gb|EDT81977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|182673333|gb|EDT85294.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226844221|gb|ACO86887.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|229260688|gb|ACQ51721.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 189 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + + L +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + +P+ I V + + + GD+I + DI+L E + + Sbjct: 114 HKGFLLEEFTPYIEVAGKVGILPEIIVVSVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|303284975|ref|XP_003061778.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457108|gb|EEH54408.1| predicted protein [Micromonas pusilla CCMP1545] Length = 254 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 7/191 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDISKRLYSKNFM---TT 63 + +RD G+ +A+ LRK G++PAI++ + I+L+ KDI + + + T Sbjct: 64 IDVRLRDASGRIAAKKLRKEGRVPAILFRSGSRAGEHISLALKDIERLVTKHGHVGVGTR 123 Query: 64 ILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + VI K L + ++ +A F+ V + V V VPV FI E+ PG+ Sbjct: 124 VLKMRFEGTDRAEDVIAKQVHLTMGTGVVENATFMPVEPTTEVNVDVPVTFIGEDVCPGV 183 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNIT 180 KQGG V+ V + C +IP +D+++ +G + ++D+ +PE + + Sbjct: 184 KQGGFPWVMRRSVPVKCQVKDIPRVFNIDVSNFSVGKVVFLKDLHVPESVKLRLDNMMTP 243 Query: 181 IATIVAPISGS 191 + ++ P G Sbjct: 244 VFSMSRPGRGG 254 >gi|153855422|ref|ZP_01996553.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] gi|149752076|gb|EDM62007.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] Length = 197 Score = 137 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G M + P+ + + + L + + + ++ Sbjct: 3 TLKAEKRSMDIK--AKKLRREGYVTGNVFGREMKESVPVKMEKAAVDRLLKACHKGSQVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI E ++V+ KD + +P+ + DF + V + + K G G Sbjct: 61 -LDIEGEKMNVLIKDVEFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVGHEKDAG----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L + EV + + D + VD++++K+GDSI ++D+ L + M+ T+ T Sbjct: 116 VLEQLLEEVQFKAYPSALVDKVEVDVSNMKVGDSIKVKDLTLSSDKDVDVMTDPETTVVT 175 >gi|322807531|emb|CBZ05106.1| LSU ribosomal protein L25p [Clostridium botulinum H04402 065] Length = 189 Score = 137 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + + L +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + +P+ I + + + + GD+I + DI+L E + + Sbjct: 114 HKGFLLEEFTPYIEVAGKVGILPEIIVISVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|57235101|ref|YP_182157.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides ethenogenes 195] gi|109893358|sp|Q3Z6J2|RL25_DEHE1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57225549|gb|AAW40606.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides ethenogenes 195] Length = 218 Score = 137 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI- 64 L+ R G + LR G P I+G+ + + +++ + + Sbjct: 4 ISLALNPRQVFG-NKNKFLRAQGITPVHIFGHGLKSLALQANTQELESTISRAGSSHLVS 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LD K+ ++ Q PV L H DF Q++ VT +P+ F E SP +K+ Sbjct: 63 LKLDTDKKTRKAFIREIQRHPVKGYLQHVDFYQINLKEKVTAEIPIHFSGE--SPLLKEK 120 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNITIA 182 G KL +++ +++P I ++L+ + ++++DI LP +++ ++ +A Sbjct: 121 GHKLTAPFTHLTVEALPDDLPPEIHIELSQFDSPEKDLYIKDIVLPGNARILNEPDLLVA 180 Query: 183 TIV 185 + Sbjct: 181 KVS 183 >gi|325187175|emb|CCA21716.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] gi|325187320|emb|CCA21859.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] Length = 258 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 9/188 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYS- 57 + L +R + G +AR LRK G +P ++YG + ++L K + Sbjct: 34 TESIVLPLHIRTQDGSRAARKLRKKGYLPGLLYGEGMNGDDTKVLVSLEKKLFDRLHRKL 93 Query: 58 -KNFMTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 + + + + + + I +D Q PV+DI + +F++ G V +P+ +INE Sbjct: 94 WTSIDNQVFKVQVKDQPPILAIMRDVQFHPVTDIPLTVNFIRYKNGR--KVSIPITYINE 151 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 SPGIK+GG +N + HEV +P ++ +D+N L + +E I P+ + Sbjct: 152 EGSPGIKRGGYINHIYHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDGVVPVV 211 Query: 176 QLNITIAT 183 +A Sbjct: 212 PAGTLLAN 219 >gi|187776863|ref|ZP_02993336.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] gi|187775522|gb|EDU39324.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] Length = 189 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 10/186 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKN 59 M A++R+K GK RK G P IIYG + + + + L +K Sbjct: 1 MSNTSMT--AIIREKSGK----KCRKEGFAPGIIYGAEMKEAIKVKFEVPSLLRYL-NKA 53 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 54 GINSRLWLNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE 113 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +G L + + +P+ I V++ + + GD+I + DI+L E + Sbjct: 114 --HKGFLLEEFTPYIEVAGKVGILPEIIVVNVGENQPGDNIKVSDIKLDEDIKLYTDPEE 171 Query: 180 TIATIV 185 +AT+ Sbjct: 172 LLATVS 177 >gi|87162737|gb|ABD28532.1| Ribosomal protein L25 [Medicago truncatula] gi|217072210|gb|ACJ84465.1| unknown [Medicago truncatula] Length = 266 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 22/202 (10%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----GN-MSDPKPIALSAKDISKR---LYSK 58 + A+ R GK + RK G++P+I++ G+ + + I++ + I K L Sbjct: 53 TILAIPRKDSGKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRS 112 Query: 59 NFMTTILTLDIGK--------------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 F++ + L + E V V+P+ L +D ++ F++ + + Sbjct: 113 FFLSRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWL 172 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VP+ F ++ SPG+K+G LN + V LCPA+ IP I VDL++L +G + M D Sbjct: 173 KVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGD 232 Query: 165 IRLPEKTSSMSQLNITIATIVA 186 + + + + + I+ Sbjct: 233 LNVHPALKLLHPKDEAVCKIMG 254 >gi|150015868|ref|YP_001308122.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] gi|149902333|gb|ABR33166.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] Length = 189 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R K AR +R+ G+IP +IYG + + + K S + I+ Sbjct: 3 ELNLTKRIKTASHGARKVRREGKIPGVIYGKEIGNEIFTVDESALLKE-TSASGEHGIVK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + + K+ Q + + + IH DF +V+ T+ V ++ + + +G Sbjct: 62 FNLDGRKGNAVIKEIQRNALGNKAIHVDFEEVAANDTMHTEVLIKIVGKGILE--SKGLI 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + C A ++P + +D+++ + G ++++ E + L+ I +I Sbjct: 120 LQTQRDLVKVSCKAKDLPKDVELDVSNGQAGTVYTFKNLKFAEGIEVLDDLSTVIGSIS 178 >gi|118474948|ref|YP_891538.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter fetus subsp. fetus 82-40] gi|118414174|gb|ABK82594.1| ribosomal protein L25, Ctc-form [Campylobacter fetus subsp. fetus 82-40] Length = 178 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K S + LRK+G + A IY + A D K + K+ + + Sbjct: 2 LEGIVRESIDKRSTKALRKDGYLIANIYAKGVENINAAFKVNDFIKAVKVKSDLK--FQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ DYQ PV+ L H D V + +PV+ G K G L Sbjct: 60 SVGGKTYDVVVVDYQKHPVTSALKHVDLKVVLDDEVSKYMIPVKPFG--TPIGFKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C ++ +S VD++ L + D+I + DI+ + + + ++ Sbjct: 118 LQSKKRLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIKTVPGVRILDADRVAVLGVI 175 >gi|270308609|ref|YP_003330667.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] gi|270154501|gb|ACZ62339.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] Length = 218 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL-YSKNFMTTI 64 L+ R G +LLR G P I+G+ + + ++ + + + Sbjct: 4 ISLALNSRQIFG-NKNKLLRAQGLTPVHIFGHGLPSLALQANTLELESTINRAGSSHLVN 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD K+ ++ Q P+ L H DF Q++ VT +P+ F E SP +K+ Sbjct: 63 IKLDTDKKTRKAFIREIQRHPIKGYLQHVDFYQINLKEKVTAEIPIHFSGE--SPLLKEK 120 Query: 125 G-KLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIA 182 G KL +++ +++P I +DL+ + ++++DI LP K +++ ++ +A Sbjct: 121 GHKLTAPFTHLTVEALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGKARILNEPDLLVA 180 Query: 183 TIV 185 + Sbjct: 181 KVS 183 >gi|210613463|ref|ZP_03289722.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] gi|210151163|gb|EEA82171.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] Length = 194 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 10/185 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ K A+ LRK G + I+G + P+ + ++ + L S+ +L Sbjct: 3 TLKAETRNMSLK--AKALRKEGFVTGCIFGRELEKSIPLKMEKSEVERLLKSEGKGGRVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + + + K+ +P+ + DF + V + +NE+K G Sbjct: 61 -LQLEGKTYDALIKEVDYNPLKGFVEEIDFQALVSSEKVHSSAEIHLLNESKLVA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + HE++ ++ + I +D+ DLKIGD+I ++D+ + E ++ L+ T+ T Sbjct: 116 IPQQMLHEINYKALPASLVEKIELDVGDLKIGDTIRVKDLVIAKDENIDLITDLDSTVVT 175 Query: 184 IVAPI 188 + P Sbjct: 176 VTEPR 180 >gi|261749230|ref|YP_003256915.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497322|gb|ACX83772.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 209 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 92/179 (51%), Gaps = 5/179 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +S R+ +GK +R +G++P I+YG P + S + K +Y+ + Sbjct: 4 INISGKKRN-IGKKFIETIRLSGEVPCILYGKDI-NIPFSTSLETFKKLVYTPELYWVSI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ ++ + + K+ Q DP+S+ ++HADF ++ + + + +P++ + G+ +GG Sbjct: 62 QIEGEEKNIKAVKKEIQFDPISEKILHADFCKIEDCKPMILEIPIKTFG--RPIGVSKGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + ++ + ++ P I +D+ L IGD I ++D+ L ++ + + LN +A + Sbjct: 120 EYYSPIRKLKVKAFPSSFPKYIKLDVQSLDIGDRITVKDL-LKKEYNILHPLNTLVARV 177 >gi|187933675|ref|YP_001886412.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187721828|gb|ACD23049.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 182 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 82/187 (43%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKN 59 M R K + + LR+ G IP +I+G + + P+ + + +K + + N Sbjct: 1 MSN--LTFKVYERSV--KENKKALRRTGLIPCVIFGEFLKESIPVKMPTGEFNKMI-TNN 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +I+TL++ + ++ + K+ Q S ++H F V + + +P+++I + Sbjct: 56 NSGSIITLNLNDKKINCVVKEIQKLSPS-KILHVSFQSVKPNEKIKMRIPIKYIGQENLE 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L + IP+ + V+++++ D + +ED+ +P+ M+ Sbjct: 115 TKRL--LLETFTPFIDFQGDVEKIPEFLEVNVSEMSCEDKLFVEDVTVPDDVLVMTDPKT 172 Query: 180 TIATIVA 186 +A I Sbjct: 173 LLAVITP 179 >gi|164686888|ref|ZP_02210916.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] gi|164604278|gb|EDQ97743.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] Length = 192 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 13/185 (7%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M + R + GK +R G++PAI+YG + P P ++ +++ L S Sbjct: 1 MQNAVFNI--TERTEKGK----KVRMKGEVPAIMYGQSLEKPIPCQITKRELIDLLASD- 53 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++L+L + ++ + + K+ Q D ++H DF V +G +V + VPVRF Sbjct: 54 --SSVLSLKLNDKVENCVLKEVQRDAF-GNIVHLDFQYVKKGDSVKLKVPVRFAGTESLD 110 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L+ + EV L + +P+ I V++ L+ G I +D+ +PE Sbjct: 111 ARRL--LLDDIVTEVQLQGNPSEMPEHIEVNVEGLEHGAQILAKDLVIPETLKMDLDPET 168 Query: 180 TIATI 184 +A I Sbjct: 169 VVARI 173 >gi|153939671|ref|YP_001392568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152935567|gb|ABS41065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|295320554|gb|ADG00932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. 230613] Length = 189 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + + L +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q + + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + +P+ I V + + + GD+I + DI+L E + + Sbjct: 114 HKGFLLEEFTPYIEVAGKVGILPEIIVVSVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|182417130|ref|ZP_02625554.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667625|ref|ZP_04527609.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378972|gb|EDT76478.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237655973|gb|EEP53529.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 195 Score = 134 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L R K SA+ RK GQ+P IIYG + D+ L + ++ Sbjct: 3 ELILNKRMKNSSNSAKKERKKGQVPGIIYGKKLGNLMFEIGEMDLVSEL-NITGEHGVIN 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D I KD Q D ++ ++H D +VS V VP++F ++ ++G Sbjct: 62 FDFDGYNGTAIIKDIQKDALTHKVMHIDLEEVSSNENVIAEVPIKFNGKDFLS--QKGVV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V + C ++P SI +D++ G + + D+ + + S + L A++V Sbjct: 120 LQSQKDSVKVSCKPQDLPKSINIDVSKAHGGSTYKLSDLEVGAEISIVDDLATVCASVV 178 >gi|170754875|ref|YP_001782856.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169120087|gb|ACA43923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] Length = 189 Score = 134 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + + L +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESIKVKFEVPSLLRYL-NKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q + + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLE-- 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + +P+ I V + + + GD+I + DI+L E + + Sbjct: 114 HKGFLLEEFTPYIEVAGKVGILPEIIVVSVGENQPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|167765811|ref|ZP_02437864.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|167712528|gb|EDS23107.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|291559174|emb|CBL37974.1| ribosomal protein L25, Ctc-form [butyrate-producing bacterium SSC/2] Length = 193 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 10/186 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFMTTIL 65 L+A RD K A+ LRK G + ++G + P+ + +++ +K L I Sbjct: 3 TLTAEKRDLKTK--AKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFLKDNKKGAHI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 60 TLLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDA----VQNG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIAT 183 + E+ +I + + +DL +GD IH++D+ L S ++ + I Sbjct: 116 IVEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPLAANSKISLVTPEDTLIVN 175 Query: 184 IVAPIS 189 I P + Sbjct: 176 IAEPEA 181 >gi|73749132|ref|YP_308371.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. CBDB1] gi|147669894|ref|YP_001214712.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. BAV1] gi|289433106|ref|YP_003462979.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] gi|109893359|sp|Q3ZYZ2|RL25_DEHSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042353|sp|A5FPN6|RL25_DEHSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|73660848|emb|CAI83455.1| ribosomal protein L25 (General stress protein Ctc) [Dehalococcoides sp. CBDB1] gi|146270842|gb|ABQ17834.1| LSU ribosomal protein L25P [Dehalococcoides sp. BAV1] gi|288946826|gb|ADC74523.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] Length = 218 Score = 133 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 82/182 (45%), Gaps = 4/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL-YSKNFMTTI 64 L+ R G +L+R G P I+G+ + ++ + + + Sbjct: 4 ISLALKPRQVFG-NKNKLIRAQGLTPVHIFGHGLKSLALQADTLELESTINRAGSSHLVN 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD K+ V ++ Q +P+ L H DF Q++ VT +P+ F E+ S ++G Sbjct: 63 IKLDTDKKTRKVFIREIQRNPIKGYLEHVDFYQINLKEKVTAEIPIHFSGES-SLLKEKG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIAT 183 KL +++ +++P I +DL+ + ++++DI LP +++ ++ +A Sbjct: 122 HKLIAPFTHLTVEALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGGAKILNEADLLVAK 181 Query: 184 IV 185 + Sbjct: 182 VS 183 >gi|317496869|ref|ZP_07955199.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895881|gb|EFV18033.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] Length = 193 Score = 133 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 10/186 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFMTTIL 65 L+A RD K A+ LRK G + ++G + P+ + +++ +K L I Sbjct: 3 TLTAEKRDLKTK--AKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFLKDNKKGAHI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 60 TLLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDA----VQNG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIAT 183 + E+ +I + + +DL +GD IH++D+ L S ++ + + Sbjct: 116 IVEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPLAANSKISLVTPEDTLVVN 175 Query: 184 IVAPIS 189 I P + Sbjct: 176 IAEPEA 181 >gi|225430902|ref|XP_002276349.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 249 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 13/189 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + A+ R GK + RK G++P+I++ + + + I++ I K L Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGKELVHVIPK--DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 F++ L I + L +D +++ F++ + + V VP+ F E+ Sbjct: 114 FLSXXXXLIIWN---FCFLRYFQLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDV 170 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ + Sbjct: 171 SPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSK 230 Query: 178 NITIATIVA 186 + + I+ Sbjct: 231 DEPVCKIMG 239 >gi|310657484|ref|YP_003935205.1| 50S ribosomal protein L25 [Clostridium sticklandii DSM 519] gi|308824262|emb|CBH20300.1| putative 50S ribosomal protein L25 1 (General stress protein CTC 1) [Clostridium sticklandii] Length = 193 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 A LRK IP ++YG+ D + + K+ K Y K T +I + V KD Sbjct: 10 AGALRKQDMIPGVVYGHGIDAISVKVPRKEFVKS-YEKFRQTKTFNCEIDQSPHQVYIKD 68 Query: 81 YQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 Q D ++ + H D L+VS + +P+ + +QG + +++ + Sbjct: 69 VQRDVLNPEKITHFDLLKVSSSDKIHTRLPIVLLGRENIE--RQGLIVQQSLNDIDVKYQ 126 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPI 188 +SI +D+ + K GD + + DI++P+ + +++ +A+I P Sbjct: 127 VGKGLESIEIDIVNFKDGDMLKVSDIKVPDYVDVLEDMDMLVASIAHPK 175 >gi|116792350|gb|ABK26327.1| unknown [Picea sitchensis] Length = 249 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 95/191 (49%), Gaps = 18/191 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKP-------IALSAKD---ISKRLYS 57 + A+ R++ G+ A RK+G +P++++ + +++ + + ++ Sbjct: 41 IQAIPRERTGRFFASKERKSGLVPSVVFEQEENGLAAVRRKRLLSVESDQIRGLVNKVGH 100 Query: 58 KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 + F++ L++ E V+P+ L P ++ +++ F+ + + + V VP Sbjct: 101 QFFLSRTFELEVVAGPRSSHILEKGRVVPRKVHLRPGTEEILNVVFVWAPKCAKLKVDVP 160 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + F E+ PG+++GG LN + + LCPA+ IP I +DL++L IG+ +H+ DI + Sbjct: 161 LVFKGEDVCPGLRKGGYLNTIKKTIGYLCPADLIPPYIDIDLSNLDIGEKLHVRDINVHP 220 Query: 170 KTSSMSQLNIT 180 +S + Sbjct: 221 SLKLLSGDDSL 231 >gi|28210591|ref|NP_781535.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium tetani E88] gi|71153136|sp|Q896W8|RL25_CLOTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28203029|gb|AAO35472.1| LSU ribosomal protein L25P [Clostridium tetani E88] Length = 193 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 7/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R++ GK + RK G IP IIYG + + I + L K + + Sbjct: 5 LIATERNEKGKTA----RKKGFIPGIIYGKDREGQSINFERGKLIAFLKEKGEKSK-MNF 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E I K+ D V+ +IH D +VS V +P+ F + K+ + Sbjct: 60 QLNGENKQGIIKEVGRDAVTSSIIHIDIQEVSALEKVRWTIPIFFEGREQLK--KKELYI 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 V EV + A++IP++IT+++ +L++G+ + ++D+ + ++L TIA I Sbjct: 118 QVYLTEVEVEGKASDIPNNITLNVGNLELGEEVKVKDLNIGSNIRIFNELENTIAIIS 175 >gi|254519678|ref|ZP_05131734.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226913427|gb|EEH98628.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 188 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 5/164 (3%) Query: 23 LLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 LRK GQIP IIYG D PI + ++ + L N + I+ +++ + + + KD Sbjct: 25 KLRKTGQIPGIIYGEFLDHTIPIKMCNAELRRMLRKNNSGS-IIEVELDDKKFNCVVKDV 83 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 Q + + ++H DF + + + +P++ I + + L + L Sbjct: 84 QKNNLH-EIVHVDFQYIKPNEVIKMRIPIKIIGQENLESRRL--TLETHNLFIDLQGNVE 140 Query: 142 NIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 IP+SI ++++D+ + D + +EDI +PE + ++ +A + Sbjct: 141 KIPESIEINVSDMNVDDKVLIEDIVIPEDITILTDPKTLLAVVS 184 >gi|188589956|ref|YP_001921406.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|251780872|ref|ZP_04823792.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500237|gb|ACD53373.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] gi|243085187|gb|EES51077.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 181 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 78/187 (41%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKN 59 M R+ K S LRK G IP II+G + + P+ + ++ + + + N Sbjct: 1 MAN--VSFKVYERNT--KESKNKLRKAGLIPGIIFGEFLKESIPVKMCNAELHRMIRNNN 56 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+TLD+ + + + K+ Q ++H F V + + +P+++I + Sbjct: 57 SGS-IITLDLEDKKFNCVVKEIQKLSPR-EILHVSFQSVKANEKIKMRIPIKYIGQENLE 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L + IP+ + V+++ + D + +EDI +P+ + Sbjct: 115 TKRL--VLETFTPFIDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPKDILVTTDPKT 172 Query: 180 TIATIVA 186 +A I Sbjct: 173 LLAVINP 179 >gi|159899066|ref|YP_001545313.1| 50S ribosomal protein L25/general stress protein Ctc [Herpetosiphon aurantiacus ATCC 23779] gi|259646690|sp|A9B076|RL25_HERA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|159892105|gb|ABX05185.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Herpetosiphon aurantiacus ATCC 23779] Length = 199 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 7/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L+ R+ GK + LR G +P I G +P + ++ +K + ++ Sbjct: 1 MANETLRLALQPREITGKK-VQSLRDQGILPIGICGRGIEPYSAQVDEREFNKVI-NQAG 58 Query: 61 MTTILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L I + V + Q + V++ +IHAD V + V + + V EN Sbjct: 59 YSGLIELSIPGQKRQVAFLLEVQRNSVTNRIIHADLRVVDANAPVELDIHVALQGENDM- 117 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQL 177 + +G LN+V + + ++P I +D + L +IG I ++D+ LP + + Sbjct: 118 -VSRGNAVLNLVQSVIRVRALPGDVPHQIDIDASSLTEIGQQILVKDLSLPATVEILDDV 176 Query: 178 NITIATIVAP 187 I T+ P Sbjct: 177 ETLILTLGYP 186 >gi|251780174|ref|ZP_04823094.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084489|gb|EES50379.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 182 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 81/187 (43%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKN 59 M R K + + LR+ G IP +I+G + + P+ + + +K + + N Sbjct: 1 MSN--VTFKVYERSI--KENKKGLRRTGLIPGVIFGEFLKESVPVKMPTGEFNKMI-TNN 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +I+TL++ + ++ + K+ Q S ++H F V + + +P++++ + Sbjct: 56 NSGSIITLNLNDKKINCVVKEIQKLSPS-KILHVSFQSVKPNEKIKMRIPIKYVGQENLE 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L + IP+ + V+++ + D + +EDI +P+ ++ Sbjct: 115 TNRL--LLETFTPFIDFQGDVEKIPEFLEVNVSKMSCEDKLFVEDISVPDDVLVLTDPKT 172 Query: 180 TIATIVA 186 +A I Sbjct: 173 LLAVITP 179 >gi|187932531|ref|YP_001886413.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187720684|gb|ACD21905.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 181 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 79/187 (42%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKN 59 M R+ K S LRK G IP II+G +++ P+ + ++ + + + N Sbjct: 1 MAN--VSFKVYERNT--KESKNKLRKTGLIPGIIFGEFLTESIPVKMCNAELHRMIRNNN 56 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+TLD+ + + + K+ Q ++H F V + + +P+++I + Sbjct: 57 SGS-IITLDLEDKKFNCVVKEIQKLSPR-EILHVSFQSVKPNEKIKMRIPIKYIGQENLE 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L + IP+ + V+++ + D + +EDI +P+ + Sbjct: 115 TKRL--VLETFTPFLDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPKDILVTTDPKT 172 Query: 180 TIATIVA 186 +A I Sbjct: 173 LLAVINP 179 >gi|149200624|ref|ZP_01877628.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] gi|149136298|gb|EDM24747.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] Length = 197 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 5/182 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ VGK ++ LR+ IP + G + I ++ KD+ + + T I Sbjct: 2 SITLKAAKREIVGKK-SKKLRREAIIPGNLQGRKIENVNIQIAQKDLQVAIKA-AGTTNI 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD+ V+ ++ +H +F V VPV+ + +NK I G Sbjct: 60 IELDVDGTKHEVLLREVLRTTNQQHFVHVEFYAPDMDVAVKTSVPVKVVGDNKL--ITAG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L + L +P+ I VD++ L+ D I + + E +S +A Sbjct: 118 GILVTPQSNLELAALPKALPEFIEVDISSLQSFSDVITVASLPAIENVEYLSAPGTALAY 177 Query: 184 IV 185 I Sbjct: 178 IA 179 >gi|188588817|ref|YP_001921405.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|188499098|gb|ACD52234.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] Length = 182 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 81/187 (43%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKN 59 M R K + + LR+ G IP +I+G + + P+ + + +K + + N Sbjct: 1 MSN--VTFKVYERSV--KENKKGLRRIGLIPGVIFGEFLKESIPVKMPTGEFNKMI-TNN 55 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +I+TL++ + ++ + K+ Q S ++H F V + + +P++++ + Sbjct: 56 NSGSIITLNLNDKKINCVVKEIQKLSPS-KILHVSFQSVKPNEKIKMRIPIKYVGQENLE 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + L + IP+ + V+++ + D + +EDI +P+ ++ Sbjct: 115 TNRL--LLETFTPFIDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDISVPDDVLVLTDPKT 172 Query: 180 TIATIVA 186 +A I Sbjct: 173 LLAVITP 179 >gi|158319103|ref|YP_001511610.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139302|gb|ABW17614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 197 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 5/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ +RD GK R++G +P ++Y K + + +++ K L S+ + + L Sbjct: 6 LNIELRDFKGKNQMLKTRRSGNVPGVVYSRGEKTKKVLFNEREMEKIL-SRYGQSMKIAL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G E I K+ Q + + ++H DF + E V + +P++ I+ + + + Sbjct: 65 NLGGERFFAIIKEIQKGSIHNEILHIDFQTLDENEKVKIQMPIQIIHREEVESSVR--LM 122 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIAT 183 + +EV + +PD + +D L D + + D+ + E + IA+ Sbjct: 123 QMNMNEVEIQTYPRYLPDKVELDATKLNEKDVLTIADLDIAENEHIEILEDREKVIAS 180 >gi|323702322|ref|ZP_08113988.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323532812|gb|EGB22685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 188 Score = 130 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 E L A+ R + A R+ G P +IYG ++ I + + L + + Sbjct: 1 MSELLLRAIERTEK----ANKARRKGFAPGVIYGEGMAEGLCIKFEMNKLLRVLKN-HRE 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + IG+ + I K+ Q D ++ ++H D V++ TV V +PV F +N+ Sbjct: 56 GAKVQVKIGEHIKQCIVKEVQRDSITGKVLHIDLQTVTDNDTVRVKIPVLFKGKNRLEEK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED-IRLPEKTSSMSQLNIT 180 K L V EV + N +P+ ITVD+ + ++GD I + D +++ ++ +++ + Sbjct: 116 KL--LLQVFLPEVEVAGKVNLLPEFITVDVENKELGDKITVRDLLKVNDEIKILNEEDDI 173 Query: 181 IATIV 185 +A + Sbjct: 174 LAVVS 178 >gi|226528050|ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG38519.1| 5S rRNA binding protein [Zea mays] Length = 240 Score = 130 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 18/199 (9%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSDPKPI-ALSAKDISKRLY- 56 + AV R+ G +A R++G++PA++ GN + + + +++ L Sbjct: 37 HTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQ 96 Query: 57 SKNFMTTILTLDI-GKELVH-------VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHV 108 S F++T + L + E + V+P D S +++ ++ EG+ + V + Sbjct: 97 SPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKVDL 156 Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 PV F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI + Sbjct: 157 PVEFKGEDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVH 216 Query: 169 EKTSSMSQLNI-TIATIVA 186 +S+ + I+A Sbjct: 217 PSLKLLSKNETMPVCKILA 235 >gi|227542458|ref|ZP_03972507.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181656|gb|EEI62628.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 213 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY ++P D++ + + + Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYSKDTEPVHFTTDRLDLTSIVRN-HG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ +DI E + K + +S + H D L + G V V VPV + E Sbjct: 60 TNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEVEVPVVYEGEPAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + + +IPD +TV + L+IG I DI L + + + + ++ Sbjct: 118 ---GALVFQEVDTLRIESDVLSIPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDLL 174 Query: 181 IATIV 185 I IV Sbjct: 175 IINIV 179 >gi|227487817|ref|ZP_03918133.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092319|gb|EEI27631.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 213 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY ++P D++ + + + Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYSKDTEPVHFTTDRLDLTSIVRN-HG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ +DI E + K + +S + H D L + G V V VPV + E Sbjct: 60 TNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEVEVPVVYEGEPAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + + +IPD +TV + L+IG I DI L + + + + ++ Sbjct: 118 ---GALVFQEVDTLRIESDVLSIPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDLL 174 Query: 181 IATIV 185 I IV Sbjct: 175 IINIV 179 >gi|218508780|ref|ZP_03506658.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Brasil 5] Length = 116 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 64/90 (71%) Query: 101 GSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + V+V +PV FINE KSPG+K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSI Sbjct: 14 NTQVSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSI 73 Query: 161 HMEDIRLPEKTSSMSQLNITIATIVAPISG 190 H+ ++ LP+ + + + TIATIVAP +G Sbjct: 74 HISEVTLPKGVTPVIDRDFTIATIVAPAAG 103 >gi|303239071|ref|ZP_07325601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] gi|302593409|gb|EFL63127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILT 66 L A+ R K SA+ +RK G +P IYG+ D I + K+I++ L S + + Sbjct: 5 LDAMER----KESAKRIRKLGYVPCSIYGSGVDRNMDIQIEDKEINRFLKS-HSIGAKAK 59 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + I + + K Q +P+S +H +F SE V V VP +F + + K Sbjct: 60 VKINASELPCVIKSIQYEPISSKPMHIEFYASSEDKLVKVKVPFKFKGKEQLFSNKL--V 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 LN++ E+ + ++P+ + ++++ +K G I MEDI LPE +S+ + + Sbjct: 118 LNILEDEIEIQGVLKDLPEFVEINVSLMKDGSVITMEDIALPEGIRLLSRKDEVVV 173 >gi|291548563|emb|CBL24825.1| LSU ribosomal protein L25P [Ruminococcus torques L2-14] Length = 197 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD K A+ LR+ G + ++G D P+ +I K L ++ ++ Sbjct: 3 TLKAEKRDMSIK--AKKLRREGFVTGNLFGRELEDSIPLKFDKAEIEKLLKVESKGGQVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ E + K+ +P+ + DF + V + +N K G Sbjct: 61 -LEVAGETYDALIKEVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLEK----LSSG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + E+S + + + VD+ LKIGD+I + D+ + + M+ L+ T+ T Sbjct: 116 VPQQMLQEISFKALPAALVEKVEVDVGPLKIGDTIRVADLPIAKDKDVDLMTDLDATVVT 175 Query: 184 IV 185 I Sbjct: 176 IT 177 >gi|242033675|ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] gi|241918086|gb|EER91230.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] Length = 240 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 18/199 (9%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSD-PKPIALSAKDISKRLY- 56 + AV R+ G +A R++G++PA++ GN + + + +++ L Sbjct: 34 HTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRQLLTADRRQLAEMLKQ 93 Query: 57 SKNFMTTILTLDI-GKELVHVIPKD-------YQLDPVSDILIHADFLQVSEGSTVTVHV 108 S F++T + L + E + I D S +++ ++ EG+ + V + Sbjct: 94 SPYFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDETSGNILNLVMVKADEGTMLKVDL 153 Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 PV F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI + Sbjct: 154 PVEFKGEDTCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVH 213 Query: 169 EKTSSMSQLNI-TIATIVA 186 +S+ I I+A Sbjct: 214 PSLKLLSKNETMPICKILA 232 >gi|253579435|ref|ZP_04856705.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849533|gb|EES77493.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 198 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 10/175 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + + K L + N + I+ Sbjct: 3 TLKAEKRTMDTK--AKRLRREGYVTGNVFGREMEGSLPVKIEKSAVEKLLKTNNKGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ K+ Q +P+ + DF + V + +N +K G Sbjct: 61 -LDVDGQSYDVLIKEIQFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVNHDKLEA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLN 178 L E+S + + D I VD+ D+K+GD I ++D+ + + + L Sbjct: 116 VLQQHLEEISFRALPSALVDKIMVDVGDMKVGDVIKVKDLAIAQDKDVDLKTDLE 170 >gi|218193303|gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group] Length = 239 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 18/199 (9%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKP---IALSAKDISKRLY- 56 + A+ R+ G +A R++G++PA++ G + K + + L Sbjct: 36 HTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQ 95 Query: 57 SKNFMTTILTLDIGKELV--------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHV 108 S F++T + L + V+P D + +++ ++ EG+ + V++ Sbjct: 96 SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNL 155 Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 PV F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI + Sbjct: 156 PVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVH 215 Query: 169 EKTSSMSQLNI-TIATIVA 186 +S+ + I+A Sbjct: 216 PSLKLLSKNETMPVCKILA 234 >gi|108709804|gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 239 Score = 128 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 18/199 (9%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKP---IALSAKDISKRLY- 56 + A+ R+ G +A R++G++PA++ G + K + + L Sbjct: 36 HTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQ 95 Query: 57 SKNFMTTILTLDIGKELV--------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHV 108 S F++T + L + V+P D + +++ ++ EG+ + V++ Sbjct: 96 SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNL 155 Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 PV F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI + Sbjct: 156 PVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVH 215 Query: 169 EKTSSMSQLNI-TIATIVA 186 +S+ + I+A Sbjct: 216 PSLRLLSKNETMPVCKILA 234 >gi|197301913|ref|ZP_03166977.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] gi|197298981|gb|EDY33517.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] Length = 199 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD K A+ LR+ G + I+G M + P+ + D+ K L +N ++ Sbjct: 3 TLKAEKRDMSIK--AKKLRREGFVTGCIFGREMKESIPLKMEKADVEKLLKVENKGGQVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P+ + DF + V + +N +K G Sbjct: 61 -LEVDGQTYDALIKEVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLDKLAA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + E+S + + + VD+ DLK+GD+I + D+ + + M+ ++ T+ T Sbjct: 116 VPQQMLQEISFKALPAALVEKVEVDVGDLKVGDTIRVADLPIAKDKDVDLMTDVDATVVT 175 Query: 184 IV 185 I Sbjct: 176 IT 177 >gi|254458793|ref|ZP_05072217.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] gi|207084559|gb|EDZ61847.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] Length = 178 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R K S + LR++G + A IYG + A + + + K + + Sbjct: 2 LEGIIRKSTDKQSTKTLRRDGYLIANIYGKGLENINAAFKMNEYIRTVRKKETLA--FPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + ++++ + Y+ PV+ L+H D + G T +VPV + E + G+K G + Sbjct: 60 SIEGKEMNLVVQSYEAQPVTGTLLHVDLMVAQPGVVTTYNVPVVPVGE--AFGLKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + +++ N+P++ +D+ + GDS + D+ + + + +I+ Sbjct: 118 HKAKPRLTVKGAIENVPNTFEIDVTKMDTGDSKLIRDLDPIPNVVMLDSDRVAVISII 175 >gi|283797259|ref|ZP_06346412.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] gi|291075109|gb|EFE12473.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] Length = 193 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + I+ Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKADAERLLKTSGRGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 61 -LNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEK----VTTG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|295115799|emb|CBL36646.1| LSU ribosomal protein L25P [butyrate-producing bacterium SM4/1] Length = 193 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + I+ Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKVDAERLLKTSGRGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 61 -LNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEK----VTTG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|295092382|emb|CBK78489.1| LSU ribosomal protein L25P [Clostridium cf. saccharolyticum K10] Length = 193 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + I+ Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKVDAERLLKTSGRGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 61 -LNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEK----VTTG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|15240108|ref|NP_201487.1| unknown protein [Arabidopsis thaliana] gi|9758136|dbj|BAB08628.1| unnamed protein product [Arabidopsis thaliana] gi|15450930|gb|AAK96736.1| Unknown protein [Arabidopsis thaliana] gi|17978763|gb|AAL47375.1| unknown protein [Arabidopsis thaliana] gi|332010889|gb|AED98272.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain protein [Arabidopsis thaliana] Length = 249 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----------GNMSDPKPIALSAKDISKRL 55 + A+ R+ G+G + R G+IPA+++ +S + + K I + Sbjct: 35 TIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSII 94 Query: 56 YS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 S F +T L I E V+P D + +++ F+ +G + Sbjct: 95 DSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKL 154 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VPV F + PG+++GG L + + LL PA +IP I VD+++L I D + ++D Sbjct: 155 KVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQD 214 Query: 165 IRLPEKTSSMSQLNI-TIATIVA 186 + +S+ + IVA Sbjct: 215 VVFHPSLKLLSKNETMPVCKIVA 237 >gi|319776525|ref|YP_004139013.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] gi|317451116|emb|CBY87349.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] Length = 95 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|89893488|ref|YP_516975.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense Y51] gi|219666815|ref|YP_002457250.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense DCB-2] gi|122483720|sp|Q24ZL1|RL25_DESHY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801043|sp|B8FW28|RL25_DESHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89332936|dbj|BAE82531.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537075|gb|ACL18814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfitobacterium hafniense DCB-2] Length = 179 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E + AV R + K +R G +P +IYG D + K ++K L ++ Sbjct: 1 MSETAIQAVERKEKPK----EVRSKGFVPGVIYGKGMDSISVKFDEKRLNKALQGRSQKA 56 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I ++ + E + Q D S IH V + V + VP+ F K Sbjct: 57 KI-SVQVAGETKQCFVGEIQKDITSGKTIHISMQVVEDDQVVKMKVPITFGGSEALSERK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + E+ L P+ +IP+ + VD+ D +GD I + D + S + IA Sbjct: 116 L--IVLPYFSELELTGPSADIPEYVAVDVADKSLGDKITVADFMVSPSVSVLDDPEKIIA 173 Query: 183 TIVA 186 I Sbjct: 174 AITG 177 >gi|68249779|ref|YP_248891.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145635085|ref|ZP_01790791.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148826154|ref|YP_001290907.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229844811|ref|ZP_04464949.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] gi|81335793|sp|Q4QL66|RL25_HAEI8 RecName: Full=50S ribosomal protein L25 gi|166223686|sp|A5UCM3|RL25_HAEIE RecName: Full=50S ribosomal protein L25 gi|68057978|gb|AAX88231.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145267693|gb|EDK07691.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148716314|gb|ABQ98524.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229812192|gb|EEP47883.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] Length = 95 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|302770773|ref|XP_002968805.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] gi|300163310|gb|EFJ29921.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] Length = 264 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 19/198 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY--------GNMSDPKPIALSAKDISKRLYSKN 59 L A R + G + +R G IP I+ G+ + + K+ Sbjct: 57 LYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNSNKLNLLLKKFGQSF 116 Query: 60 FMTTILTLDIGKE----------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL-P 168 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ + P Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDLNVTP 236 Query: 169 EKTSSMSQLNITIATIVA 186 + IV Sbjct: 237 GLVVYAMDPRWPVCKIVG 254 >gi|302784798|ref|XP_002974171.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] gi|300158503|gb|EFJ25126.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] Length = 264 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 19/198 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY--------GNMSDPKPIALSAKDISKRLYSKN 59 L A R + G + +R G IP I+ G+ + + K+ Sbjct: 57 LYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNSNKLNLLLKKFGQSF 116 Query: 60 FMTTILTLDIGKE----------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL-P 168 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ + P Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDLNVTP 236 Query: 169 EKTSSMSQLNITIATIVA 186 + IV Sbjct: 237 GLVVYAMDPRWPVCKIVG 254 >gi|297794323|ref|XP_002865046.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] gi|297310881|gb|EFH41305.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] Length = 245 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 23/203 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----------GNMSDPKPIALSAKDISKRL 55 + A+ R+ G+G + R G+IPA+++ +S + + K I + Sbjct: 31 TIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLETDASKRGVSRKQLLTADNKQIKSII 90 Query: 56 YS---KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 S F +T L I E V+P D + +++ F+ +G + Sbjct: 91 DSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKIHRDEENGKILNLVFVWADDGEKL 150 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VPV F + PG+K+GG L + + LL PA +IP I VD+++L I D + ++D Sbjct: 151 KVDVPVVFNGLDNCPGLKKGGNLRSIRSTLKLLGPAEHIPSKIEVDVSELDIEDKVLLQD 210 Query: 165 IRLPEKTSSMSQLNI-TIATIVA 186 + +S+ + IVA Sbjct: 211 VVFHPSLKLLSKNETMPVCKIVA 233 >gi|24373672|ref|NP_717715.1| ribosomal protein L25 [Shewanella oneidensis MR-1] gi|24348022|gb|AAN55159.1|AE015652_8 ribosomal protein L25 [Shewanella oneidensis MR-1] Length = 148 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T++ Sbjct: 55 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSV 114 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 115 VTIVLDGKEVGVRAQAMQRHAFKPIIEHVDF 145 >gi|145633031|ref|ZP_01788763.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145637517|ref|ZP_01793175.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148828381|ref|YP_001293134.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229846264|ref|ZP_04466376.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|166223687|sp|A5UIZ5|RL25_HAEIG RecName: Full=50S ribosomal protein L25 gi|144986257|gb|EDJ92836.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145269323|gb|EDK09268.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148719623|gb|ABR00751.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229811268|gb|EEP46985.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|309973302|gb|ADO96503.1| 50S ribosomal protein L25 [Haemophilus influenzae R2846] Length = 95 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|315634254|ref|ZP_07889541.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] gi|315476844|gb|EFU67589.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] Length = 128 Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ F + ++ Sbjct: 36 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDEVNNAQAHDAFYSDVI 95 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 96 TLVIDGKEVAVKVQAMQRHPFKPKLVHVDFKRV 128 >gi|329124034|ref|ZP_08252581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] gi|327467459|gb|EGF12957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] Length = 95 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 52/93 (55%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVDGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|218133333|ref|ZP_03462137.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] gi|217992206|gb|EEC58210.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] Length = 198 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G ++ P+ + D+ + + + + + I+ Sbjct: 3 TLKAEKRSLDVK--AKRLRREGFVTGNVFGRELAESIPVKMQKVDVERMMKTDHKGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ E V+ KD +P+ I+ F + V V +N +K G Sbjct: 61 -LDVDGEQYDVLIKDIAFNPLKGIVEEISFQALVSNEMVHSVAEVILVNHDK----VAEG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + + +EVS + I DS+ VD++ +KIGD+I ++D+ + + + L + T Sbjct: 116 VVQQLLNEVSYKAYPSAIVDSVKVDVSQMKIGDTIRVKDLDIAADKDVEIHTDLEAPVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VTA 178 >gi|301170388|emb|CBW29994.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae 10810] Length = 95 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTVQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|251792509|ref|YP_003007235.1| 50S ribosomal protein L25 [Aggregatibacter aphrophilus NJ8700] gi|247533902|gb|ACS97148.1| ribosomal L25p family [Aggregatibacter aphrophilus NJ8700] Length = 95 Score = 123 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHDAFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|145627769|ref|ZP_01783570.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|145630952|ref|ZP_01786728.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145639243|ref|ZP_01794849.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145641796|ref|ZP_01797372.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|319897302|ref|YP_004135497.1| 50S ribosomal subunit protein l25 [Haemophilus influenzae F3031] gi|144979544|gb|EDJ89203.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|144983419|gb|EDJ90895.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145271546|gb|EDK11457.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145273610|gb|EDK13480.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.4-21] gi|309751124|gb|ADO81108.1| 50S ribosomal protein L25 [Haemophilus influenzae R2866] gi|317432806|emb|CBY81171.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3031] Length = 95 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 52/93 (55%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVDGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|332278657|ref|ZP_08391070.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|332101009|gb|EGJ04355.1| 50S ribosomal protein L25 [Shigella sp. D9] Length = 126 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 48/97 (49%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +++ ++A +R + GKG++R LR + PAIIYG P I L + F Sbjct: 30 EKEMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFY 89 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +LT+ + + + V +D Q P L H DF++ Sbjct: 90 SEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 126 >gi|253989145|ref|YP_003040501.1| 50S ribosomal protein L25 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780595|emb|CAQ83757.1| 50s ribosomal protein l25 [Photorhabdus asymbiotica] Length = 94 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 46/93 (49%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAI+YG +P I L + + F + IL Sbjct: 2 FTINAEVRKEQGKGASRRLRRANKFPAIVYGGKQEPVSIELDHDQVINMEHKAEFYSEIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P L H DFL+ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFLRA 94 >gi|110615712|gb|ABF04379.1| 50S ribosomal subunit protein L25 [Shigella flexneri 5 str. 8401] Length = 118 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 48/97 (49%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +++ ++A +R + GKG++R LR + PAIIYG P I L + F Sbjct: 22 EKEMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFY 81 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +LT+ + + + V +D Q P L H DF++ Sbjct: 82 SEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 118 >gi|57339950|gb|AAW49962.1| hypothetical protein FTT0675 [synthetic construct] Length = 131 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R+ +G G++R LR+ G+IPA+IYG + + L + K F Sbjct: 27 MAN--FVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAF 84 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TLDI + VI K Q P LIHADF++V Sbjct: 85 FSSEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 122 >gi|315274580|ref|ZP_07869458.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] gi|313615790|gb|EFR89040.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] Length = 124 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVG--DAPGVKAGG 119 Query: 126 KLNVV 130 L + Sbjct: 120 VLQQI 124 >gi|53792263|dbj|BAD52896.1| hypothetical protein [Oryza sativa Japonica Group] Length = 381 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + +++ +K I K L Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDL 151 FI E+ SPG+++G N + V LCPA+ +P I VDL Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDL 226 >gi|225028646|ref|ZP_03717838.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] gi|224954032|gb|EEG35241.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] Length = 194 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 LSA RD K A+ LR+ G + ++G + P+ + K+ + L + N + ++ Sbjct: 3 TLSAEKRDMQIK--AKKLRREGFVTGNVFGKNMEGSMPLKIEKKEAERILRTCNKGSQLI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + + + V+ K+ + + ++ DF + +G V V +N K + G Sbjct: 61 -LTVEGQKMPVLLKEIDYNAMKHEIVEMDFQALVKGEKVHSVAEVVLLNHEK----VKSG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + ++ E+S N+ + + +DL+ GD+I ++D+ + E + T+ Sbjct: 116 VVELLLEEISYEALPENLIEKVEIDLDGKTAGDTIRVKDLPIATAEGIHLKTNPEETVVQ 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|288871671|ref|ZP_06118530.2| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] gi|288862497|gb|EFC94795.1| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] Length = 212 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + + + L + N + IL Sbjct: 17 TLKAEKRSMSIK--AKRLRREGYVTGNVFGRDIQESIPVKIERTVVERLLKTCNKGSQIL 74 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ KD + + I+ DF + G V V +N +K G Sbjct: 75 -LDVDGQAYDVLIKDISFNAMKGIVEEIDFQALVRGEKVHSVAEVILVNHDK----VMNG 129 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLN 178 L E+S + D + +D+ D+K+GD+I + D+ + + ++ L+ Sbjct: 130 VLQQQLQEISYKALPEALIDKVRIDVGDMKVGDTIRVADLDIAKNKNVDLVTDLD 184 >gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] gi|91073049|gb|ABE07930.1| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|307554254|gb|ADN47029.1| 50S ribosomal subunit protein L25 [Escherichia coli ABU 83972] Length = 126 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +++ ++A +R + GKG++R LR + PAIIYG P + L + F Sbjct: 30 EKEMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFY 89 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +LT+ + + + V +D Q P L+H DF++ Sbjct: 90 SEVLTIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA 126 >gi|255283668|ref|ZP_05348223.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] gi|255265733|gb|EET58938.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] Length = 195 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ ++ KD + L + N + I+ Sbjct: 3 TLKAEKRSLDTK--AKKLRREGYVTGNVFGKELKESIPVQITKKDAERLLKTCNKGSQIM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ K+ + + + DF + G V V +N K G Sbjct: 61 -LDVEGRKLDVLIKEIDYNSMKRQIDEIDFQALVSGEEVHSVAEVVLLNHEKVV----NG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 + + HE++ + D + +++ ++KIGD++ ++D+ + EK M+ + T Sbjct: 116 LIQLKLHEIAYKAVPEALVDKVEINMENMKIGDTVLVKDLDIASNEKIHLMTDPEAVVVT 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|16273519|ref|NP_439772.1| 50S ribosomal protein L25 [Haemophilus influenzae Rd KW20] gi|260580405|ref|ZP_05848234.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260582164|ref|ZP_05849958.1| ribosomal protein L25P [Haemophilus influenzae NT127] gi|1173000|sp|P45281|RL25_HAEIN RecName: Full=50S ribosomal protein L25 gi|1574477|gb|AAC23277.1| ribosomal protein L25 (rpL25) [Haemophilus influenzae Rd KW20] gi|260093082|gb|EEW77016.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260094796|gb|EEW78690.1| ribosomal protein L25P [Haemophilus influenzae NT127] Length = 95 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 52/93 (55%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|300122709|emb|CBK23275.2| Ribosomal protein L25 [Blastocystis hominis] Length = 253 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 8/168 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS----DPKPIALSAKDISKRLYSKNF--M 61 + A R+K GK +R LRKNG IP ++YG+ + IA+ A ++ + N Sbjct: 44 IPAFRREKDGKNYSRFLRKNGAIPGVLYGSDGNGHDERILIAVPASEVDRFTKRLNLALE 103 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+ LD+ E + P+ P++D + +FL++++ + V +P+R+ N+ K+ I Sbjct: 104 CTLFELDLEGERILCFPRQLSCHPLTDKPENLNFLRMNKKTGTMVQIPIRYYNQTKNREI 163 Query: 122 KQGGKLNVVCH--EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 K GG L+ +V + +P I +L L + +ED+ Sbjct: 164 KLGGFLSTATRYLDVRVKGDVTYVPPFINCNLEKLTHKRAFGVEDLDF 211 >gi|56707795|ref|YP_169691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670266|ref|YP_666823.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118497599|ref|YP_898649.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida U112] gi|134302021|ref|YP_001121990.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|187931857|ref|YP_001891842.1| 50S ribosomal protein L25 [Francisella tularensis subsp. mediasiatica FSC147] gi|195536299|ref|ZP_03079306.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208779400|ref|ZP_03246746.1| ribosomal L25p family [Francisella novicida FTG] gi|224456866|ref|ZP_03665339.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|254369280|ref|ZP_04985292.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|254370293|ref|ZP_04986298.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254372963|ref|ZP_04988452.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida GA99-3549] gi|254374414|ref|ZP_04989896.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|254874608|ref|ZP_05247318.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|71153143|sp|Q5NH01|RL25_FRATT RecName: Full=50S ribosomal protein L25 gi|123169478|sp|Q14IF3|RL25_FRAT1 RecName: Full=50S ribosomal protein L25 gi|166223682|sp|A0Q6N0|RL25_FRATN RecName: Full=50S ribosomal protein L25 gi|166223683|sp|A4IY68|RL25_FRATW RecName: Full=50S ribosomal protein L25 gi|226736324|sp|B2SH55|RL25_FRATM RecName: Full=50S ribosomal protein L25 gi|56604287|emb|CAG45308.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320599|emb|CAL08691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118423505|gb|ABK89895.1| 50S ribosomal protein L25 [Francisella novicida U112] gi|134049798|gb|ABO46869.1| ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|151568536|gb|EDN34190.1| hypothetical protein FTBG_00046 [Francisella tularensis subsp. tularensis FSC033] gi|151570690|gb|EDN36344.1| 50S ribosomal protein L25 [Francisella novicida GA99-3549] gi|151572134|gb|EDN37788.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|157122230|gb|EDO66370.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|187712766|gb|ACD31063.1| 50S ribosomal L25p family [Francisella tularensis subsp. mediasiatica FSC147] gi|194372776|gb|EDX27487.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208745200|gb|EDZ91498.1| ribosomal L25p family [Francisella novicida FTG] gi|254840607|gb|EET19043.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158969|gb|ADA78360.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis NE061598] gi|332678303|gb|AEE87432.1| LSU ribosomal protein L25p [Francisella cf. novicida Fx1] Length = 96 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R+ +G G++R LR+ G+IPA+IYG + + L + K F Sbjct: 1 MAN--FVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TLDI + VI K Q P LIHADF++V Sbjct: 59 FSSEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|332290495|ref|YP_004421347.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] gi|330433391|gb|AEC18450.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] Length = 94 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R+ GKG++R LRK G+IPAI+YG P I L+ +++ +F + ++ Sbjct: 2 FKFNAEIRETQGKGASRRLRKAGKIPAIVYGGNEAPVSIVLNHNELNNAQVEDSFYSEVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF + Sbjct: 62 TLVINGKEVAVKVQAMQRHPFKPKLVHIDFKRA 94 >gi|291517978|emb|CBK73199.1| ribosomal protein L25, Ctc-form [Butyrivibrio fibrisolvens 16/4] Length = 195 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 12/181 (6%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILTL 67 RD K A+ LR+ G + ++G + P+ K+ SK+ T +TL Sbjct: 5 KVQRRDMEKK--AKRLRREGYVTGNLFGRDIEQSIPLQFEVKEAEALRKSKH---TQMTL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + +V+ K+ D ++ DF ++ +G + V N+ G L Sbjct: 60 DLEGKKYNVLLKELHFDAAKHQIVEMDFQELVKGEVIHATAEVVLENKEA----VTEGVL 115 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIATIV 185 + EV+ A ++ + I +D + L++GD+I + D+ + + ++ + + ++ Sbjct: 116 EQLVSEVAYKAKAEDVVEKIEIDCSSLRLGDTITVADLAIAKNKKVEVTTRADQVVVEVI 175 Query: 186 A 186 A Sbjct: 176 A 176 >gi|89256299|ref|YP_513661.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115314748|ref|YP_763471.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|156502367|ref|YP_001428432.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367634|ref|ZP_04983655.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|290953135|ref|ZP_06557756.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|295313663|ref|ZP_06804247.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|109893364|sp|Q2A3P1|RL25_FRATH RecName: Full=50S ribosomal protein L25 gi|122325232|sp|Q0BM50|RL25_FRATO RecName: Full=50S ribosomal protein L25 gi|166223681|sp|A7NBX3|RL25_FRATF RecName: Full=50S ribosomal protein L25 gi|89144130|emb|CAJ79389.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115129647|gb|ABI82834.1| ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|134253445|gb|EBA52539.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|156252970|gb|ABU61476.1| Ribosomal L25p family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 96 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R+ +G G++R LR+ G+IPA+IYG + + L + K F Sbjct: 1 MAN--FVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKEF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TLDI + VI K Q P LIHADF++V Sbjct: 59 FSSEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|328675846|gb|AEB28521.1| LSU ribosomal protein L25p [Francisella cf. novicida 3523] Length = 96 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R+ +G G++R LR+ G+IPA+IYG + + L + K F Sbjct: 1 MAN--FVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TLDI + VI K Q P LIHADF++V Sbjct: 59 FSSEITLDIDGKEEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|152979370|ref|YP_001344999.1| 50S ribosomal protein L25 [Actinobacillus succinogenes 130Z] gi|171704325|sp|A6VQ17|RL25_ACTSZ RecName: Full=50S ribosomal protein L25 gi|150841093|gb|ABR75064.1| ribosomal protein L25 [Actinobacillus succinogenes 130Z] Length = 95 Score = 120 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQVHDSFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF + Sbjct: 63 TLVIDGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|182417185|ref|ZP_02625555.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667957|ref|ZP_04527941.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379027|gb|EDT76533.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237656305|gb|EEP53861.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 190 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L R K SAR R+ G IP +IYG + D+ + L + + +L Sbjct: 3 ELLLSKRVKGNGHSARKERRKGAIPGVIYGKEIGNVLFDVDVLDLEREL-AVSGEHGVLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D + + K+ Q + + +IH D +VS +T V ++ + + Sbjct: 62 FDFEGKKGTAVIKELQKNHFGNKVIHMDLEEVSAKEKMTTEVSIKISGKGLLE--SKALI 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L V V + C A ++P +D+++ G ++D+++ +K L+ I +IVA Sbjct: 120 LQVQKDLVKVTCTAADLPKEFNLDVSEGTAGTVYTLKDLKISDKVIVDDDLSSVIGSIVA 179 >gi|114562619|ref|YP_750132.1| ribosomal protein L25 [Shewanella frigidimarina NCIMB 400] gi|122300188|sp|Q084M1|RL25_SHEFN RecName: Full=50S ribosomal protein L25 gi|114333912|gb|ABI71294.1| LSU ribosomal protein L25P [Shewanella frigidimarina NCIMB 400] Length = 95 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 50/92 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R ++GKGS+R LR G++PA+IYG +P I KDI + +F TT Sbjct: 2 SYTINAVTRTEIGKGSSRRLRHAGKVPAVIYGPGKEPVSIKFEHKDIINIQLNDDFYTTD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ I + V V K Q ++ H DF+ Sbjct: 62 LTVSIEGKEVKVRVKAIQRHAFKQLVEHIDFM 93 >gi|260598644|ref|YP_003211215.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] gi|260217821|emb|CBA32311.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] Length = 94 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRHANKFPAIIYGGTEAPVAIELDHDKLMNMQAKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L H DF++ Sbjct: 62 TLAIDGKEVKVKVQAVQRHPYKPKLQHIDFVRA 94 >gi|167627805|ref|YP_001678305.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189042358|sp|B0TZF1|RL25_FRAP2 RecName: Full=50S ribosomal protein L25 gi|167597806|gb|ABZ87804.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 96 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F Sbjct: 1 MAN--FSLKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TL+I + VI K Q P L+HADF++V Sbjct: 59 FSSEITLEIDGQEERVIIKALQRHPYKVKLVHADFMRV 96 >gi|153813481|ref|ZP_01966149.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] gi|149830425|gb|EDM85517.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] Length = 199 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ +S ++ K L + + + ++ Sbjct: 3 TLKAEKRSMDVK--AKRLRREGYVTGNVFGREIEGSIPVKMSKSEVDKLLKTDHKGSQVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P++ + DF + V + +N +K G Sbjct: 61 -LEVDGQTYDALIKEVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDK----VADG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 L E++ + + D + VD+ LK+GD+I ++D+ L + + T Sbjct: 116 VLQENMEEINYRAYPSALVDKVEVDVAGLKVGDTIRVKDLSLAKDKDVDIKDDPEAVVLT 175 Query: 184 IVA 186 +VA Sbjct: 176 VVA 178 >gi|226324228|ref|ZP_03799746.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] gi|225206676|gb|EEG89030.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] Length = 194 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ K A+ LR+ G + ++G + P+ ++ K+ K L + N + + Sbjct: 3 TLKAEKRNMQTK--AKKLRREGYVTGNVFGREIEGSIPVQMTQKEAEKFLKA-NGKGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ E + V+ K+ D + ++ DF + G V V N++K G Sbjct: 60 MLDLDGEQMDVLVKEVDYDSMGSKVLEIDFQALVSGEMVHSVAEVVIHNQSKVVT----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + + E+ + + + + VD+ DLK+G++I ++D+ + + ++ +A Sbjct: 116 VVEELLDEIEYKALPSALVEKVIVDVGDLKVGETIKVKDLDIAKDKDVKLITDPEADVAG 175 Query: 184 IVA 186 + A Sbjct: 176 VAA 178 >gi|157375586|ref|YP_001474186.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] gi|189042373|sp|A8FW35|RL25_SHESH RecName: Full=50S ribosomal protein L25 gi|157317960|gb|ABV37058.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] Length = 95 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 48/91 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F ++ Sbjct: 2 SYTIAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKEPISIKFDHKDIINIQENADFYSSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V + Q ++ H DF Sbjct: 62 LTITVDGKDVKVRVQAMQRHAFKGLIEHIDF 92 >gi|52425171|ref|YP_088308.1| 50S ribosomal protein L25 [Mannheimia succiniciproducens MBEL55E] gi|68053090|sp|Q65TI7|RL25_MANSM RecName: Full=50S ribosomal protein L25 gi|52307223|gb|AAU37723.1| RplY protein [Mannheimia succiniciproducens MBEL55E] Length = 95 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG D I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRSAQGKGASRRLRHNGQIPAIVYGGNEDAVSIVLNHDELNNAQAHDSFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF + Sbjct: 63 TLVINGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|241668366|ref|ZP_04755944.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876899|ref|ZP_05249609.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842920|gb|EET21334.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 96 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F Sbjct: 1 MAN--FSLKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAF 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TL+I + VI K Q P L+HADF++V Sbjct: 59 FSSEITLEIDGQEEKVIIKALQRHPYKVKLVHADFMRV 96 >gi|170726508|ref|YP_001760534.1| 50S ribosomal protein L25 [Shewanella woodyi ATCC 51908] gi|226736368|sp|B1KDP2|RL25_SHEWM RecName: Full=50S ribosomal protein L25 gi|169811855|gb|ACA86439.1| ribosomal protein L25 [Shewanella woodyi ATCC 51908] Length = 95 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHADKVPAVIYGPGKEPVAIVFDHKDIINIQENEDFYTST 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+++ V V K Q ++ H DF Sbjct: 62 LTINLDGSDVKVSVKAMQRHAFKPLIEHVDF 92 >gi|325578128|ref|ZP_08148263.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] gi|325159864|gb|EGC71993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] Length = 97 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F + ++ Sbjct: 5 FKFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQAHDSFYSDVI 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q P L+H DF + Sbjct: 65 TLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKRA 97 >gi|15602504|ref|NP_245576.1| 50S ribosomal protein L25 [Pasteurella multocida subsp. multocida str. Pm70] gi|68053230|sp|Q9CN10|RL25_PASMU RecName: Full=50S ribosomal protein L25 gi|12720914|gb|AAK02723.1| RpL25 [Pasteurella multocida subsp. multocida str. Pm70] Length = 94 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F T ++ Sbjct: 2 FKFNAEVRQSQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDDLNNAQVHDAFYTDVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 62 TLVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|113970172|ref|YP_733965.1| 50S ribosomal protein L25 [Shewanella sp. MR-4] gi|114047638|ref|YP_738188.1| 50S ribosomal protein L25 [Shewanella sp. MR-7] gi|117920337|ref|YP_869529.1| 50S ribosomal protein L25 [Shewanella sp. ANA-3] gi|123130433|sp|Q0HJ59|RL25_SHESM RecName: Full=50S ribosomal protein L25 gi|123326513|sp|Q0HUS4|RL25_SHESR RecName: Full=50S ribosomal protein L25 gi|166223722|sp|A0KWF4|RL25_SHESA RecName: Full=50S ribosomal protein L25 gi|113884856|gb|ABI38908.1| LSU ribosomal protein L25P [Shewanella sp. MR-4] gi|113889080|gb|ABI43131.1| LSU ribosomal protein L25P [Shewanella sp. MR-7] gi|117612669|gb|ABK48123.1| LSU ribosomal protein L25P [Shewanella sp. ANA-3] Length = 95 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T++ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINIQTNEDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q ++ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHAFKPMIEHVDF 92 >gi|117619381|ref|YP_856743.1| ribosomal L25p family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560788|gb|ABK37736.1| ribosomal L25p family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 122 Score = 118 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR Q+PAI+YG + + I + K F ++ Sbjct: 29 SFVFQAEVRSDLGKGASRRLRHADQVPAIVYGAGKEAQSITVDHKKFILAQEKPEFYESV 88 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I E V+V K Q PV L+H DF++V Sbjct: 89 LTLVINGEEVNVKVKAIQRHPVRYKLVHLDFVRV 122 >gi|113461016|ref|YP_719083.1| 50S ribosomal protein L25 [Haemophilus somnus 129PT] gi|170717588|ref|YP_001784672.1| 50S ribosomal protein L25 [Haemophilus somnus 2336] gi|123327292|sp|Q0I3J3|RL25_HAES1 RecName: Full=50S ribosomal protein L25 gi|189042361|sp|B0UU73|RL25_HAES2 RecName: Full=50S ribosomal protein L25 gi|112823059|gb|ABI25148.1| LSU ribosomal protein L25P [Haemophilus somnus 129PT] gi|168825717|gb|ACA31088.1| ribosomal protein L25 [Haemophilus somnus 2336] Length = 95 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 50/94 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K +A +R K GKG++R LR NGQIPAI+YG P I L+ +++ +F + Sbjct: 2 SFKFNAEVRSKQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQIHDSFYSDT 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + + V + Q P L+H DF +V Sbjct: 62 IILVIEGKEISVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|34499512|ref|NP_903727.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] gi|71153134|sp|Q7NQT0|RL25_CHRVO RecName: Full=50S ribosomal protein L25 gi|34105362|gb|AAQ61717.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] Length = 95 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R +G G++R LR+ G++PA++YG D + L + + +F T++ Sbjct: 2 SYELIAAKRVDLGTGASRRLRRAGKLPAVVYGAGKDAVSLELDHNTLYHAVKHADFHTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L L I + V +Q+ P ++H DF +V Sbjct: 62 LELVIDGQKEQVKVAAFQMHPYKQQVLHIDFARV 95 >gi|221633140|ref|YP_002522365.1| 50S ribosomal protein L25, Ctc-form [Thermomicrobium roseum DSM 5159] gi|254801064|sp|B9L0T5|RL25_THERP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221156354|gb|ACM05481.1| ribosomal protein L25, Ctc-form [Thermomicrobium roseum DSM 5159] Length = 223 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 7/173 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTILT 66 ++ R GK + LR+ G+ P +I G + +P P+A+ ++ + + ++ Sbjct: 7 VNGERRTVFGKK-VKRLRRLGRTPGVIAGPVVPEPIPVAVDEREFERAFHH-VGTARLVD 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + V ++ L PV+ +++ +F VTV VPV + E + G Sbjct: 65 LVVDGTTYPVFIREVALHPVTREILNVEFYAPDLARPVTVTVPVLTVGELAPDVV---GV 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIG-DSIHMEDIRLPEKTSSMSQLN 178 + + E+ + + +P+ I VDL+ L IH +I LP + + Sbjct: 122 VTIQTPELEIRALPDAVPEHIEVDLSLLSTERTVIHAGEIPLPVGVELETDPD 174 >gi|212635580|ref|YP_002312105.1| 50S ribosomal protein L25 [Shewanella piezotolerans WP3] gi|226736367|sp|B8CPE2|RL25_SHEPW RecName: Full=50S ribosomal protein L25 gi|212557064|gb|ACJ29518.1| Ribosomal protein L25 [Shewanella piezotolerans WP3] Length = 95 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F TT Sbjct: 2 SYTIAAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQANEDFYTTD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTISLDGKDVAVRVQDMQRHAFKPLIEHIDF 92 >gi|94502332|ref|ZP_01308804.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833659|ref|YP_001597855.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] gi|94451109|gb|EAT14062.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206148|gb|ABS30458.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] Length = 188 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 5/179 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L + + K + R LR G IP I+YG + + K +Y+ IL Sbjct: 4 VNLQGKTKKFLKKINNRELRNYGYIPCIVYGINK-NIKFYILLSILKKVIYTFKVYKVIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + + K+ Q +P++D +IH DF ++ + + + VP+ + S G+ +GG Sbjct: 63 EIK-NEYKIEALLKEIQFNPINDDVIHVDFYELKKNKYIIISVPIISVGH--SLGVSKGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + +++L I D + +D+++L IGD++ +++I P+ + N IA++ Sbjct: 120 EYKIFIKKINLKVIPEFILDHMDIDISNLDIGDNLSIKNIYNPKYI-ILHNCNDVIASV 177 >gi|37526759|ref|NP_930103.1| 50S ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] gi|68053195|sp|Q7N352|RL25_PHOLL RecName: Full=50S ribosomal protein L25 gi|36786191|emb|CAE15243.1| ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 94 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAI+YG + I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRRANKFPAIVYGGNQELVSIELDHDQVINMEQKAEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P L H DFL+ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFLRA 94 >gi|68053216|sp|Q8EF74|RL25_SHEON RecName: Full=50S ribosomal protein L25 Length = 95 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T++ Sbjct: 2 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHAFKPIIEHVDF 92 >gi|269139661|ref|YP_003296362.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|267985322|gb|ACY85151.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|304559531|gb|ADM42195.1| LSU ribosomal protein L25p [Edwardsiella tarda FL6-60] Length = 94 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG + L F T IL Sbjct: 2 FTINAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLDHDTTMNMSEKDGFYTDIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + + V + Q P + H DF++ Sbjct: 62 TLSVDGKEIKVKIQAVQRHPYKPKITHIDFVRA 94 >gi|240948487|ref|ZP_04752862.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] gi|240297150|gb|EER47716.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] Length = 95 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + Sbjct: 2 SFKFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNLNNAQIHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|126174127|ref|YP_001050276.1| 50S ribosomal protein L25 [Shewanella baltica OS155] gi|153000452|ref|YP_001366133.1| 50S ribosomal protein L25 [Shewanella baltica OS185] gi|160875049|ref|YP_001554365.1| 50S ribosomal protein L25 [Shewanella baltica OS195] gi|217973559|ref|YP_002358310.1| 50S ribosomal protein L25 [Shewanella baltica OS223] gi|304411331|ref|ZP_07392945.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|307305347|ref|ZP_07585095.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|166223718|sp|A3D3U4|RL25_SHEB5 RecName: Full=50S ribosomal protein L25 gi|166223719|sp|A6WMN1|RL25_SHEB8 RecName: Full=50S ribosomal protein L25 gi|189042370|sp|A9KZ17|RL25_SHEB9 RecName: Full=50S ribosomal protein L25 gi|254801061|sp|B8E7C8|RL25_SHEB2 RecName: Full=50S ribosomal protein L25 gi|125997332|gb|ABN61407.1| LSU ribosomal protein L25P [Shewanella baltica OS155] gi|151365070|gb|ABS08070.1| ribosomal protein L25 [Shewanella baltica OS185] gi|160860571|gb|ABX49105.1| ribosomal protein L25 [Shewanella baltica OS195] gi|217498694|gb|ACK46887.1| ribosomal protein L25 [Shewanella baltica OS223] gi|304350186|gb|EFM14590.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|306911650|gb|EFN42075.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|315267281|gb|ADT94134.1| Ribosomal protein L25-like protein [Shewanella baltica OS678] Length = 95 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 47/91 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T+ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFDHKDIINIQANADFYTST 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V + Q ++ H DF Sbjct: 62 LTIVVDGKEVGVRAQAMQRHVFKPLIEHVDF 92 >gi|301156484|emb|CBW15955.1| 50S ribosomal subunit protein L25 [Haemophilus parainfluenzae T3T1] Length = 95 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQVHDSFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKRA 95 >gi|238920497|ref|YP_002934012.1| hypothetical protein NT01EI_2608 [Edwardsiella ictaluri 93-146] gi|259646686|sp|C5BG54|RL25_EDWI9 RecName: Full=50S ribosomal protein L25 gi|238870066|gb|ACR69777.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 94 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG + L F T +L Sbjct: 2 FTINAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLDHDSTMNLSEKDGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + + V + Q P + H DF++ Sbjct: 62 TLSVDGKEIKVKIQAVQRHPYKPKITHIDFVRA 94 >gi|167624264|ref|YP_001674558.1| 50S ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] gi|189042371|sp|B0TIW4|RL25_SHEHH RecName: Full=50S ribosomal protein L25 gi|167354286|gb|ABZ76899.1| ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] Length = 95 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTIALEGKDVKVRVQDMQRHAFKPMIEHVDF 92 >gi|260914051|ref|ZP_05920524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] gi|260631684|gb|EEX49862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] Length = 94 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ +F + ++ Sbjct: 2 FKFTAEVRQAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDLNNAQVHDSFYSEVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 62 TLVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|317492527|ref|ZP_07950955.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919519|gb|EFV40850.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 94 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 42/93 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R + GKG++R LR +G+ PAI+YG +P + + + F ++ Sbjct: 2 FTIEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V + Q P L H DF++ Sbjct: 62 ALMIDGKETKVKVQAVQRHPFKRKLTHVDFVRA 94 >gi|32035070|ref|ZP_00135129.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207971|ref|YP_001053196.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae L20] gi|303250281|ref|ZP_07336481.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252046|ref|ZP_07533946.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166223658|sp|A3MZK5|RL25_ACTP2 RecName: Full=50S ribosomal protein L25 gi|126096763|gb|ABN73591.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650897|gb|EFL81053.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860515|gb|EFM92528.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 95 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 47/94 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|260060920|ref|YP_003194000.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] gi|88785052|gb|EAR16221.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] Length = 170 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%) Query: 55 LYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 +Y+ N T ++ + + + +D Q PV+D ++H DF Q+ VT+ +PVR + Sbjct: 1 MYTPNAHTVVIEFE-DGRKIDAVLQDIQFHPVTDNILHVDFYQLFPDKEVTMKIPVRLLG 59 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 SPG++ GG+L ++ + N+PD VD+++LKIGD + ++ ++ E T + Sbjct: 60 --NSPGVRNGGRLLFRKRKLVIRALPKNLPDFFNVDISNLKIGDLVAVDTLKSDEFT--I 115 Query: 175 SQLNITIAT 183 + T+ Sbjct: 116 LHPDTTVVV 124 >gi|295109370|emb|CBL23323.1| LSU ribosomal protein L25P [Ruminococcus obeum A2-162] Length = 199 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + ++ K L + + + ++ Sbjct: 3 TLKAEKRSMDVK--AKRLRREGYVTGNVFGREIEGSIPVKMLKTEVDKLLKTDHKGSQVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P++ + DF + V + +N +K G Sbjct: 61 -LEVDGQTYDALIKEVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDK----VADG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 L EV+ + + D + VD+ LK+GD+I ++D+ L + + T Sbjct: 116 VLQENMEEVNYKAYPSALVDKVEVDVAGLKVGDTIRVKDLSLAKDKDVDIKDDPEAVVLT 175 Query: 184 IVA 186 +VA Sbjct: 176 VVA 178 >gi|261867995|ref|YP_003255917.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293389976|ref|ZP_06634310.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413327|gb|ACX82698.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290950510|gb|EFE00629.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 95 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDVNNAQVHDTFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I ++ V V + Q P L+H DF +V Sbjct: 63 TLVIDEKEVAVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|307245327|ref|ZP_07527415.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254280|ref|ZP_07536120.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258740|ref|ZP_07540472.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853668|gb|EFM85885.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862759|gb|EFM94713.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867091|gb|EFM98947.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 95 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 47/94 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|119774751|ref|YP_927491.1| 50S ribosomal protein L25 [Shewanella amazonensis SB2B] gi|166223717|sp|A1S615|RL25_SHEAM RecName: Full=50S ribosomal protein L25 gi|119767251|gb|ABL99821.1| LSU ribosomal protein L25P [Shewanella amazonensis SB2B] Length = 95 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 50/91 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR+ G++PA+IYG +P I KDI + +F T++ Sbjct: 2 SYTIPAQTRTEIGKGSSRRLRREGKVPAVIYGVGKEPVSIVFDHKDIINIQANDDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V+V + Q ++ H DF Sbjct: 62 LTIVLDGKEVNVRAQAMQRHVFKPMIDHVDF 92 >gi|194434195|ref|ZP_03066462.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|194417524|gb|EDX33626.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|332096170|gb|EGJ01173.1| ribosomal L25p family protein [Shigella dysenteriae 155-74] Length = 94 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSKVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|15605861|ref|NP_213238.1| general stress protein Ctc [Aquifex aeolicus VF5] gi|68051943|sp|O66678|CTC_AQUAE RecName: Full=General stress protein ctc gi|2983034|gb|AAC06644.1| general stress protein Ctc [Aquifex aeolicus VF5] Length = 151 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ ++ E + KD Q + + IH D +S + V VP+ F+ Sbjct: 2 PHGEAFLIEAELDGETRVCLLKDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVG--T 59 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G++ GG V H +++ P IP+ I VD++ L +G+++H+ DI PE + Sbjct: 60 PAGVEAGGTFEPVMHTLTIKAPPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDNP 119 Query: 178 NITIATI 184 T+A + Sbjct: 120 EETVAVV 126 >gi|120598921|ref|YP_963495.1| 50S ribosomal protein L25 [Shewanella sp. W3-18-1] gi|146292993|ref|YP_001183417.1| 50S ribosomal protein L25 [Shewanella putrefaciens CN-32] gi|166223721|sp|A4Y6N5|RL25_SHEPC RecName: Full=50S ribosomal protein L25 gi|166223723|sp|A1RJU6|RL25_SHESW RecName: Full=50S ribosomal protein L25 gi|120559014|gb|ABM24941.1| LSU ribosomal protein L25P [Shewanella sp. W3-18-1] gi|145564683|gb|ABP75618.1| LSU ribosomal protein L25P [Shewanella putrefaciens CN-32] gi|319426477|gb|ADV54551.1| Ribosomal protein L25-like protein [Shewanella putrefaciens 200] Length = 95 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T++ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFEHKDIINIQANEDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHVFKPIIEHVDF 92 >gi|16130123|ref|NP_416690.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30063628|ref|NP_837799.1| 50S ribosomal protein L25 [Shigella flexneri 2a str. 2457T] gi|56480061|ref|NP_708084.2| 50S ribosomal protein L25 [Shigella flexneri 2a str. 301] gi|74312706|ref|YP_311125.1| 50S ribosomal protein L25 [Shigella sonnei Ss046] gi|82776212|ref|YP_402561.1| 50S ribosomal protein L25 [Shigella dysenteriae Sd197] gi|89109003|ref|AP_002783.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. W3110] gi|157158450|ref|YP_001463538.1| 50S ribosomal protein L25 [Escherichia coli E24377A] gi|157161667|ref|YP_001458985.1| 50S ribosomal protein L25 [Escherichia coli HS] gi|170019498|ref|YP_001724452.1| 50S ribosomal protein L25 [Escherichia coli ATCC 8739] gi|170081807|ref|YP_001731127.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188493756|ref|ZP_03001026.1| ribosomal L25p family [Escherichia coli 53638] gi|191165343|ref|ZP_03027185.1| ribosomal L25p family [Escherichia coli B7A] gi|193062225|ref|ZP_03043320.1| ribosomal L25p family [Escherichia coli E22] gi|193068236|ref|ZP_03049200.1| ribosomal L25p family [Escherichia coli E110019] gi|194427121|ref|ZP_03059672.1| ribosomal L25p family [Escherichia coli B171] gi|194436155|ref|ZP_03068257.1| ribosomal L25p family [Escherichia coli 101-1] gi|209919645|ref|YP_002293729.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218554755|ref|YP_002387668.1| 50S ribosomal protein L25 [Escherichia coli IAI1] gi|218695800|ref|YP_002403467.1| 50S ribosomal protein L25 [Escherichia coli 55989] gi|229774940|ref|YP_689684.2| 50S ribosomal protein L25 [Shigella flexneri 5 str. 8401] gi|238901362|ref|YP_002927158.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|253772888|ref|YP_003035719.1| 50S ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162200|ref|YP_003045308.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|256017646|ref|ZP_05431511.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|256022130|ref|ZP_05435995.1| 50S ribosomal protein L25 [Escherichia sp. 4_1_40B] gi|260844791|ref|YP_003222569.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|260856159|ref|YP_003230050.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|260868886|ref|YP_003235288.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|291283439|ref|YP_003500257.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|293415471|ref|ZP_06658114.1| ribosomal L25p family protein [Escherichia coli B185] gi|293446537|ref|ZP_06662959.1| ribosomal L25p family protein [Escherichia coli B088] gi|297521512|ref|ZP_06939898.1| 50S ribosomal protein L25 [Escherichia coli OP50] gi|300819118|ref|ZP_07099320.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300822638|ref|ZP_07102776.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300902162|ref|ZP_07120162.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300918833|ref|ZP_07135402.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300926293|ref|ZP_07142096.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300930421|ref|ZP_07145830.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300950050|ref|ZP_07163997.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300956856|ref|ZP_07169116.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|301024317|ref|ZP_07188006.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|301306202|ref|ZP_07212277.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|301328669|ref|ZP_07221730.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301644211|ref|ZP_07244219.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|307138845|ref|ZP_07498201.1| 50S ribosomal protein L25 [Escherichia coli H736] gi|307311235|ref|ZP_07590879.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|309786647|ref|ZP_07681267.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309793069|ref|ZP_07687497.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|312973561|ref|ZP_07787733.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|331642814|ref|ZP_08343949.1| ribosomal L25p family protein [Escherichia coli H736] gi|331653619|ref|ZP_08354620.1| ribosomal L25p family protein [Escherichia coli M718] gi|331668889|ref|ZP_08369737.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331678139|ref|ZP_08378814.1| ribosomal L25p family protein [Escherichia coli H591] gi|60393657|sp|P68918|RL25_SHIFL RecName: Full=50S ribosomal protein L25 gi|60393658|sp|P68919|RL25_ECOLI RecName: Full=50S ribosomal protein L25 gi|109893395|sp|Q32HY5|RL25_SHIDS RecName: Full=50S ribosomal protein L25 gi|109893396|sp|Q3Z022|RL25_SHISS RecName: Full=50S ribosomal protein L25 gi|166987891|sp|A7ZP09|RL25_ECO24 RecName: Full=50S ribosomal protein L25 gi|166987892|sp|A8A248|RL25_ECOHS RecName: Full=50S ribosomal protein L25 gi|189042355|sp|B1IY84|RL25_ECOLC RecName: Full=50S ribosomal protein L25 gi|226736315|sp|B7M535|RL25_ECO8A RecName: Full=50S ribosomal protein L25 gi|226736316|sp|B1X883|RL25_ECODH RecName: Full=50S ribosomal protein L25 gi|226736318|sp|B6I184|RL25_ECOSE RecName: Full=50S ribosomal protein L25 gi|254801046|sp|B7LAK9|RL25_ECO55 RecName: Full=50S ribosomal protein L25 gi|259646685|sp|C4ZU30|RL25_ECOBW RecName: Full=50S ribosomal protein L25 gi|6573331|pdb|1D6K|A Chain A, Nmr Solution Structure Of The 5s Rrna E-LoopL25 COMPLEX gi|6730329|pdb|1DFU|P Chain P, Crystal Structure Of E.Coli Ribosomal Protein L25 Complexed With A 5s Rrna Fragment At 1.8 A Resolution gi|14278052|pdb|1GIY|V Chain V, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix gi|28373738|pdb|1ML5|VV Chain v, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|33357920|pdb|1P85|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357948|pdb|1P86|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754063|pdb|2AW4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754119|pdb|2AWB|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666572|pdb|1VS6|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666624|pdb|1VS8|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116667453|pdb|2GYA|T Chain T, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667505|pdb|2GYC|T Chain T, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|118138112|pdb|2I2T|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138166|pdb|2I2V|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|119390366|pdb|2J28|V Chain V, Model Of E. Coli Srp Bound To 70s Rncs gi|157836058|pdb|2QOV|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836110|pdb|2QOX|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836162|pdb|2QOZ|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836214|pdb|2QP1|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157884251|pdb|487D|N Chain N, Seven Ribosomal Proteins Fitted To A Cryo-Electron Microscopic Map Of The Large 50s Subunit At 7.5 Angstroms Resolution gi|158429733|pdb|2QAM|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429785|pdb|2QAO|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429843|pdb|2QBA|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429895|pdb|2QBC|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429947|pdb|2QBE|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430000|pdb|2QBG|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430053|pdb|2QBI|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430106|pdb|2QBK|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431406|pdb|2Z4L|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431459|pdb|2Z4N|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988752|pdb|2VHM|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) gi|168988783|pdb|2VHN|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) gi|169404604|pdb|2RDO|V Chain V, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound gi|197107302|pdb|3DF2|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107354|pdb|3DF4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|209870355|pdb|3BBX|V Chain V, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex gi|224510751|pdb|3FIK|V Chain V, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|256032375|pdb|3E1B|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre- Accommodation State gi|256032432|pdb|3E1D|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Post- Accommodation State gi|257097363|pdb|3I1N|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097415|pdb|3I1P|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097469|pdb|3I1R|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097523|pdb|3I1T|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097578|pdb|3I20|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097633|pdb|3I22|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560353|pdb|3KCR|V Chain V, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|294662272|pdb|2WWQ|W Chain W, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308198376|pdb|1VT2|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198750|pdb|3ORB|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|308388028|pdb|3OFQ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388059|pdb|3OFR|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320086|pdb|3OFC|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320117|pdb|3OFD|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320190|pdb|3OFZ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320221|pdb|3OG0|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113675|pdb|3OAS|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113706|pdb|3OAT|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|326634231|pdb|3IZT|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634264|pdb|3IZU|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|329666037|pdb|3J01|V Chain V, Structure Of The Ribosome-Secye Complex In The Membrane Environment gi|216640|dbj|BAA02585.1| ribosomal protein L25 [Escherichia coli] gi|1788512|gb|AAC75246.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30041881|gb|AAP17608.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 2457T] gi|56383612|gb|AAN43791.2| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 301] gi|73856183|gb|AAZ88890.1| 50S ribosomal subunit protein L25 [Shigella sonnei Ss046] gi|81240360|gb|ABB61070.1| 50S ribosomal subunit protein L25 [Shigella dysenteriae Sd197] gi|85675294|dbj|BAE76650.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K12 substr. W3110] gi|157067347|gb|ABV06602.1| ribosomal L25p family [Escherichia coli HS] gi|157080480|gb|ABV20188.1| ribosomal L25p family [Escherichia coli E24377A] gi|169754426|gb|ACA77125.1| ribosomal protein L25 [Escherichia coli ATCC 8739] gi|169889642|gb|ACB03349.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188488955|gb|EDU64058.1| ribosomal L25p family [Escherichia coli 53638] gi|190904506|gb|EDV64213.1| ribosomal L25p family [Escherichia coli B7A] gi|192931891|gb|EDV84490.1| ribosomal L25p family [Escherichia coli E22] gi|192958515|gb|EDV88954.1| ribosomal L25p family [Escherichia coli E110019] gi|194414742|gb|EDX31013.1| ribosomal L25p family [Escherichia coli B171] gi|194424883|gb|EDX40868.1| ribosomal L25p family [Escherichia coli 101-1] gi|209765898|gb|ACI81261.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765904|gb|ACI81264.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209912904|dbj|BAG77978.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218352532|emb|CAU98309.1| 50S ribosomal subunit protein L25 [Escherichia coli 55989] gi|218361523|emb|CAQ99112.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI1] gi|238859864|gb|ACR61862.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|242377824|emb|CAQ32591.1| 50S ribosomal subunit protein L25, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253323932|gb|ACT28534.1| ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974101|gb|ACT39772.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|253978268|gb|ACT43938.1| 50S ribosomal protein L25 [Escherichia coli BL21(DE3)] gi|257754808|dbj|BAI26310.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|257759938|dbj|BAI31435.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|257765242|dbj|BAI36737.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|260448720|gb|ACX39142.1| ribosomal protein L25 [Escherichia coli DH1] gi|290763312|gb|ADD57273.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|291323367|gb|EFE62795.1| ribosomal L25p family protein [Escherichia coli B088] gi|291433119|gb|EFF06098.1| ribosomal L25p family protein [Escherichia coli B185] gi|299880414|gb|EFI88625.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|300316337|gb|EFJ66121.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|300405681|gb|EFJ89219.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300414076|gb|EFJ97386.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300417722|gb|EFK01033.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300450540|gb|EFK14160.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300461743|gb|EFK25236.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300524838|gb|EFK45907.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300528271|gb|EFK49333.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300838568|gb|EFK66328.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|300845061|gb|EFK72821.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301077509|gb|EFK92315.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|306908741|gb|EFN39238.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|308123355|gb|EFO60617.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|308925340|gb|EFP70827.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309702500|emb|CBJ01826.1| 50S ribosomal protein L25 [Escherichia coli ETEC H10407] gi|310332156|gb|EFP99391.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|313651299|gb|EFS15697.1| ribosomal L25p family protein [Shigella flexneri 2a str. 2457T] gi|315061495|gb|ADT75822.1| 50S ribosomal subunit protein L25 [Escherichia coli W] gi|315136819|dbj|BAJ43978.1| 50S ribosomal protein L25 [Escherichia coli DH1] gi|315255299|gb|EFU35267.1| ribosomal L25p family protein [Escherichia coli MS 85-1] gi|315615431|gb|EFU96063.1| ribosomal L25p family protein [Escherichia coli 3431] gi|320178859|gb|EFW53822.1| LSU ribosomal protein L25p [Shigella boydii ATCC 9905] gi|320184701|gb|EFW59494.1| LSU ribosomal protein L25p [Shigella flexneri CDC 796-83] gi|320199783|gb|EFW74372.1| LSU ribosomal protein L25p [Escherichia coli EC4100B] gi|320641256|gb|EFX10734.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. G5101] gi|320646645|gb|EFX15556.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. 493-89] gi|320651900|gb|EFX20275.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. H 2687] gi|320657625|gb|EFX25423.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663230|gb|EFX30539.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. USDA 5905] gi|320667981|gb|EFX34884.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. LSU-61] gi|323152227|gb|EFZ38517.1| ribosomal L25p family protein [Escherichia coli EPECa14] gi|323161737|gb|EFZ47619.1| ribosomal L25p family protein [Escherichia coli E128010] gi|323168666|gb|EFZ54346.1| ribosomal L25p family protein [Shigella sonnei 53G] gi|323171838|gb|EFZ57482.1| ribosomal L25p family protein [Escherichia coli LT-68] gi|323176914|gb|EFZ62504.1| ribosomal L25p family protein [Escherichia coli 1180] gi|323184189|gb|EFZ69566.1| ribosomal L25p family protein [Escherichia coli 1357] gi|323377924|gb|ADX50192.1| Ribosomal protein L25-like protein [Escherichia coli KO11] gi|323936802|gb|EGB33087.1| ribosomal L25p family protein [Escherichia coli E1520] gi|323940744|gb|EGB36932.1| ribosomal L25p family protein [Escherichia coli E482] gi|323945002|gb|EGB41067.1| ribosomal L25p family protein [Escherichia coli H120] gi|323961579|gb|EGB57186.1| ribosomal L25p family protein [Escherichia coli H489] gi|323972932|gb|EGB68129.1| ribosomal L25p family protein [Escherichia coli TA007] gi|324020659|gb|EGB89878.1| ribosomal L25p family protein [Escherichia coli MS 117-3] gi|324117974|gb|EGC11873.1| ribosomal L25p family protein [Escherichia coli E1167] gi|331039612|gb|EGI11832.1| ribosomal L25p family protein [Escherichia coli H736] gi|331048468|gb|EGI20544.1| ribosomal L25p family protein [Escherichia coli M718] gi|331064083|gb|EGI35994.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331074599|gb|EGI45919.1| ribosomal L25p family protein [Escherichia coli H591] gi|332343967|gb|AEE57301.1| ribosomal protein [Escherichia coli UMNK88] gi|332754828|gb|EGJ85193.1| ribosomal L25p family protein [Shigella flexneri 4343-70] gi|332755232|gb|EGJ85596.1| ribosomal L25p family protein [Shigella flexneri K-671] gi|332756582|gb|EGJ86933.1| ribosomal L25p family protein [Shigella flexneri 2747-71] gi|332765999|gb|EGJ96209.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2930-71] gi|333001326|gb|EGK20894.1| ribosomal L25p family protein [Shigella flexneri VA-6] gi|333001995|gb|EGK21561.1| ribosomal L25p family protein [Shigella flexneri K-218] gi|333002910|gb|EGK22466.1| ribosomal L25p family protein [Shigella flexneri K-272] gi|333016627|gb|EGK35956.1| ribosomal L25p family protein [Shigella flexneri K-304] gi|333016914|gb|EGK36238.1| ribosomal L25p family protein [Shigella flexneri K-227] gi|227856|prf||1712317A ribosomal protein L25 gi|229550|prf||754714A ribosomal protein L25 Length = 94 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|317048878|ref|YP_004116526.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] gi|316950495|gb|ADU69970.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] Length = 94 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A R + GKG++R LR + PAI+YG P I L I + F + +L Sbjct: 2 FTINAEARKEQGKGASRRLRHANKFPAIVYGGTEAPVSIELDHDSIMNMQAKEGFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V + Q P L H DF++ Sbjct: 62 TIVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|145299053|ref|YP_001141894.1| 50S ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223659|sp|A4SMM4|RL25_AERS4 RecName: Full=50S ribosomal protein L25 gi|142851825|gb|ABO90146.1| ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] Length = 95 Score = 116 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR Q+PAIIYG + + I + K F ++ Sbjct: 2 SFVFQAEVRSDLGKGASRRLRHADQVPAIIYGAGKEAQSITVDHKKFIIAQEKPEFYESV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I E V+V K Q PV L+H DF++V Sbjct: 62 LTLVINGEEVNVKVKAIQRHPVKPKLVHLDFVRV 95 >gi|320174781|gb|EFW49907.1| LSU ribosomal protein L25p [Shigella dysenteriae CDC 74-1112] Length = 94 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 46/93 (49%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKAAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|307128535|ref|YP_003880565.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] gi|306482997|gb|ADM89867.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] Length = 190 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR G IP IIY + + K + + IL + + + + K+ Q Sbjct: 22 LRNYGYIPCIIYSKNK-NIKFYVLLSILKKIILTYKVYKVILEMK-NENKIEALLKEIQF 79 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 P++D +IH DF ++ + + + +P+ + S G+ +GG+ + +++ + +++ Sbjct: 80 HPINDEIIHVDFFELKKDKYIIISIPIISVGH--SLGVSKGGEYKLFLNKIKIKIITDDL 137 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 D I +++N+L IGDS+++++I P+ + N IA+I Sbjct: 138 LDHINLNINNLDIGDSLYIKNIYNPKYI-ILHNSNEVIASI 177 >gi|149910383|ref|ZP_01899025.1| RplY protein [Moritella sp. PE36] gi|149806531|gb|EDM66500.1| RplY protein [Moritella sp. PE36] Length = 95 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 44/94 (46%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR + PA+IYG + I L ++ ++ F +++ Sbjct: 2 SFTFEAQVRSDLGKGASRRLRHANKFPAVIYGKGEEAISIELEHDVVNNAQRNEEFFSSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +TL + + V K Q + H DF++ Sbjct: 62 ITLVVDGTEMAVTVKAMQRHAFKPKVQHIDFIRA 95 >gi|156933239|ref|YP_001437155.1| 50S ribosomal protein L25 [Cronobacter sakazakii ATCC BAA-894] gi|166223679|sp|A7MLN0|RL25_ENTS8 RecName: Full=50S ribosomal protein L25 gi|156531493|gb|ABU76319.1| hypothetical protein ESA_01051 [Cronobacter sakazakii ATCC BAA-894] Length = 94 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRHANKFPAIVYGGTEAPVAIELDHDKVMNMQAKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L H DF++ Sbjct: 62 TLAIDGKEVKVKVQAVQRHPYKPKLHHIDFVRA 94 >gi|229508247|ref|ZP_04397752.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229511514|ref|ZP_04400993.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229515036|ref|ZP_04404496.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229518653|ref|ZP_04408096.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229520761|ref|ZP_04410184.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229529327|ref|ZP_04418717.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229607821|ref|YP_002878469.1| 50S ribosomal protein L25 [Vibrio cholerae MJ-1236] gi|229333101|gb|EEN98587.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229342316|gb|EEO07311.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229343342|gb|EEO08317.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229347741|gb|EEO12700.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229351479|gb|EEO16420.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229355752|gb|EEO20673.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229370476|gb|ACQ60899.1| LSU ribosomal protein L25p [Vibrio cholerae MJ-1236] Length = 97 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F Sbjct: 1 MRVNTMKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 I+ L I + V V P+D Q + H DF+++ Sbjct: 61 YEAIV-LVIDGQEVKVKPQDVQRHAYKPKVEHMDFIRI 97 >gi|6980397|pdb|1B75|A Chain A, Solution Structure Of Ribosomal Protein L25 From Escherichia Coli Length = 94 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|308049140|ref|YP_003912706.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307631330|gb|ADN75632.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 95 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 42/94 (44%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R GKG++R LR G IPAIIYG ++P I L I F T Sbjct: 2 SFVFEAKVRTDAGKGASRRLRHAGLIPAIIYGGNAEPVSIELDHDKILHAQDEDAFYTAE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P + H DF +V Sbjct: 62 LTIVVDGKEEKVKAQAMQRHPYKPKVTHIDFKRV 95 >gi|257465408|ref|ZP_05629779.1| 50S ribosomal protein L25 [Actinobacillus minor 202] gi|257451068|gb|EEV25111.1| 50S ribosomal protein L25 [Actinobacillus minor 202] Length = 95 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + Sbjct: 2 SFKFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNVNNAQVHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|165975947|ref|YP_001651540.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149834|ref|YP_001968359.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252157|ref|ZP_07338325.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247493|ref|ZP_07529538.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249726|ref|ZP_07531705.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307256542|ref|ZP_07538323.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260973|ref|ZP_07542655.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263155|ref|ZP_07544776.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226736271|sp|B3GX65|RL25_ACTP7 RecName: Full=50S ribosomal protein L25 gi|226736272|sp|B0BU91|RL25_ACTPJ RecName: Full=50S ribosomal protein L25 gi|165876048|gb|ABY69096.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914965|gb|ACE61217.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648940|gb|EFL79128.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855996|gb|EFM88154.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858234|gb|EFM90311.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864952|gb|EFM96854.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869275|gb|EFN01070.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871517|gb|EFN03240.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 95 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 46/94 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF + Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA 95 >gi|218549601|ref|YP_002383392.1| 50S ribosomal protein L25 [Escherichia fergusonii ATCC 35469] gi|226736321|sp|B7LJS7|RL25_ESCF3 RecName: Full=50S ribosomal protein L25 gi|218357142|emb|CAQ89776.1| 50S ribosomal subunit protein L25 [Escherichia fergusonii ATCC 35469] gi|323968115|gb|EGB63525.1| ribosomal L25p family protein [Escherichia coli M863] gi|323977616|gb|EGB72702.1| ribosomal L25p family protein [Escherichia coli TW10509] gi|324114398|gb|EGC08367.1| ribosomal L25p family protein [Escherichia fergusonii B253] gi|325497998|gb|EGC95857.1| 50S ribosomal protein L25 [Escherichia fergusonii ECD227] gi|327252434|gb|EGE64093.1| ribosomal L25p family protein [Escherichia coli STEC_7v] Length = 94 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 48/93 (51%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR + PAIIYG P +AL + F + +L Sbjct: 2 FTINAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA 94 >gi|291562562|emb|CBL41378.1| LSU ribosomal protein L25P [butyrate-producing bacterium SS3/4] Length = 203 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 79/184 (42%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 L A R K A+ LR+ G + ++G+ + P+ +++ D + L +++ I Sbjct: 2 TTLKAEKRSMDVK--AKRLRREGFVTGNVFGHAIEGSIPVKMNSVDAERLLKTEHKGGQI 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LDI ++ V+ K+ + ++ + DF + VT + +N G Sbjct: 60 -NLDIEGQVYDVLIKEVDYNAMTRKIDEIDFQALVSTEKVTSTAEIVILNREAVIG---- 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIA 182 G L EV+ + + + T+D LK+GD +H++D+ + + + + Sbjct: 115 GVLQEDLSEVAYRAFPSALIEKTTLDAAGLKVGDIVHVKDLDIAKNKDIDLKTDPEAVVL 174 Query: 183 TIVA 186 +++ Sbjct: 175 SVIP 178 >gi|15802741|ref|NP_288768.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 EDL933] gi|15832331|ref|NP_311104.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187775726|ref|ZP_02798101.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188024890|ref|ZP_02774614.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189010144|ref|ZP_02805045.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189402686|ref|ZP_02784079.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189403055|ref|ZP_02792816.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189404570|ref|ZP_02790366.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189405210|ref|ZP_02814011.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189406271|ref|ZP_02827407.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|195935567|ref|ZP_03080949.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. EC4024] gi|208807041|ref|ZP_03249378.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208813367|ref|ZP_03254696.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208819050|ref|ZP_03259370.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209398752|ref|YP_002271599.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|217327947|ref|ZP_03444030.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254794086|ref|YP_003078923.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. TW14359] gi|261223354|ref|ZP_05937635.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK2000] gi|261259095|ref|ZP_05951628.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK966] gi|68053224|sp|Q8XE69|RL25_ECO57 RecName: Full=50S ribosomal protein L25 gi|226736313|sp|B5YWX8|RL25_ECO5E RecName: Full=50S ribosomal protein L25 gi|12516517|gb|AAG57323.1|AE005451_4 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. EDL933] gi|13362546|dbj|BAB36500.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187771079|gb|EDU34923.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188016119|gb|EDU54241.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189001900|gb|EDU70886.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189354272|gb|EDU72691.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189362864|gb|EDU81283.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189364889|gb|EDU83305.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189371388|gb|EDU89804.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189375583|gb|EDU93999.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|208726842|gb|EDZ76443.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208734644|gb|EDZ83331.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208739173|gb|EDZ86855.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209160152|gb|ACI37585.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|209765900|gb|ACI81262.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765902|gb|ACI81263.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765906|gb|ACI81265.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|217320314|gb|EEC28739.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254593486|gb|ACT72847.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. TW14359] gi|320192186|gb|EFW66831.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. EC1212] gi|326339541|gb|EGD63352.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1125] gi|326344002|gb|EGD67763.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1044] Length = 94 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNIQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|187731625|ref|YP_001879482.1| 50S ribosomal protein L25 [Shigella boydii CDC 3083-94] gi|226736369|sp|B2TV63|RL25_SHIB3 RecName: Full=50S ribosomal protein L25 gi|187428617|gb|ACD07891.1| ribosomal L25p family [Shigella boydii CDC 3083-94] Length = 94 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVINMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|227357714|ref|ZP_03842063.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] gi|227162043|gb|EEI47057.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] Length = 104 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 45/96 (46%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +K ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F Sbjct: 9 KKMLTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYA 68 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V K Q + H DFL+ Sbjct: 69 DFVNLVIDGKATKVKVKAVQRHEYKPKITHIDFLRA 104 >gi|284007246|emb|CBA72542.1| 50S ribosomal protein L25 [Arsenophonus nasoniae] Length = 93 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LRKN ++PAI+YG +P I L+ ++ + F +L Sbjct: 2 LTINAEIRKEQGKGASRRLRKNNKLPAIVYGGDQEPVSIELNHDEVINQESKPEFY-EVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL +G + V + Q P L H DFL+V Sbjct: 61 TLVVGGKKTKVKVQAVQRHPFKPKLTHIDFLRV 93 >gi|226953440|ref|ZP_03823904.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|294649570|ref|ZP_06726990.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] gi|226835823|gb|EEH68206.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|292824557|gb|EFF83340.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] Length = 100 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 2/100 (2%) Query: 1 MDQKECKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R+ + GKGS+R LR QIPAIIYG ++P I L ++I K L + Sbjct: 1 MPMANFVLNAQAREAAQQGKGSSRRLRHAAQIPAIIYGGSAEPVAITLELREIVKALENN 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + IG ++ +V + Q P + +HADF + Sbjct: 61 AFFEEVIEIKIGDKVENVKIQALQRHPAKNTPMHADFKRA 100 >gi|312967485|ref|ZP_07781700.1| ribosomal L25p family protein [Escherichia coli 2362-75] gi|312287682|gb|EFR15587.1| ribosomal L25p family protein [Escherichia coli 2362-75] Length = 94 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 46/93 (49%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P + L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSKVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA 94 >gi|157961782|ref|YP_001501816.1| 50S ribosomal protein L25 [Shewanella pealeana ATCC 700345] gi|189042372|sp|A8H3Z4|RL25_SHEPA RecName: Full=50S ribosomal protein L25 gi|157846782|gb|ABV87281.1| ribosomal protein L25 [Shewanella pealeana ATCC 700345] Length = 95 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHAKKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTIALEGKDVKVRVQDMQRHAFKPMIEHVDF 92 >gi|127512758|ref|YP_001093955.1| ribosomal protein L25 [Shewanella loihica PV-4] gi|166223720|sp|A3QDZ8|RL25_SHELP RecName: Full=50S ribosomal protein L25 gi|126638053|gb|ABO23696.1| LSU ribosomal protein L25P [Shewanella loihica PV-4] Length = 95 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 45/91 (49%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG + I + I + +F + Sbjct: 2 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q ++ H DF Sbjct: 62 ITIVLDGKEVKVRVQAMQRHAFKPMIEHVDF 92 >gi|110642396|ref|YP_670126.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|161486176|ref|NP_754608.2| 50S ribosomal protein L25 [Escherichia coli CFT073] gi|162138406|ref|YP_541461.2| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|170680132|ref|YP_001744381.1| 50S ribosomal protein L25 [Escherichia coli SMS-3-5] gi|191169977|ref|ZP_03031531.1| ribosomal L25p family [Escherichia coli F11] gi|215487407|ref|YP_002329838.1| 50S ribosomal protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218559106|ref|YP_002392019.1| 50S ribosomal protein L25 [Escherichia coli S88] gi|218690334|ref|YP_002398546.1| 50S ribosomal protein L25 [Escherichia coli ED1a] gi|218700657|ref|YP_002408286.1| 50S ribosomal protein L25 [Escherichia coli IAI39] gi|218705717|ref|YP_002413236.1| 50S ribosomal protein L25 [Escherichia coli UMN026] gi|227887242|ref|ZP_04005047.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|237704658|ref|ZP_04535139.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|293405653|ref|ZP_06649645.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|293410549|ref|ZP_06654125.1| ribosomal L25p family protein [Escherichia coli B354] gi|298381335|ref|ZP_06990934.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300897754|ref|ZP_07116147.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300935113|ref|ZP_07150144.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|300981433|ref|ZP_07175514.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300982905|ref|ZP_07176369.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|301021041|ref|ZP_07185084.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|301048925|ref|ZP_07195918.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|306814700|ref|ZP_07448862.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|331647841|ref|ZP_08348933.1| ribosomal L25p family protein [Escherichia coli M605] gi|331658266|ref|ZP_08359228.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331663690|ref|ZP_08364600.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331673707|ref|ZP_08374470.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331683865|ref|ZP_08384461.1| ribosomal L25p family protein [Escherichia coli H299] gi|68053217|sp|Q8FFS1|RL25_ECOL6 RecName: Full=50S ribosomal protein L25 gi|123343824|sp|Q0TFQ4|RL25_ECOL5 RecName: Full=50S ribosomal protein L25 gi|226736312|sp|B7MFA0|RL25_ECO45 RecName: Full=50S ribosomal protein L25 gi|226736314|sp|B7NN00|RL25_ECO7I RecName: Full=50S ribosomal protein L25 gi|226736317|sp|B7N5E9|RL25_ECOLU RecName: Full=50S ribosomal protein L25 gi|226736319|sp|B1LKT4|RL25_ECOSM RecName: Full=50S ribosomal protein L25 gi|254801045|sp|B7UFK2|RL25_ECO27 RecName: Full=50S ribosomal protein L25 gi|254801047|sp|B7MXK1|RL25_ECO81 RecName: Full=50S ribosomal protein L25 gi|110343988|gb|ABG70225.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|170517850|gb|ACB16028.1| ribosomal L25p family [Escherichia coli SMS-3-5] gi|190909493|gb|EDV69078.1| ribosomal L25p family [Escherichia coli F11] gi|215265479|emb|CAS09880.1| 50S ribosomal subunit protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218365875|emb|CAR03616.1| 50S ribosomal subunit protein L25 [Escherichia coli S88] gi|218370643|emb|CAR18452.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI39] gi|218427898|emb|CAR08817.2| 50S ribosomal subunit protein L25 [Escherichia coli ED1a] gi|218432814|emb|CAR13708.1| 50S ribosomal subunit protein L25 [Escherichia coli UMN026] gi|222033946|emb|CAP76687.1| 50S ribosomal protein L25 [Escherichia coli LF82] gi|226901024|gb|EEH87283.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|227835592|gb|EEJ46058.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|281179277|dbj|BAI55607.1| 50S ribosomal protein L25 [Escherichia coli SE15] gi|284922169|emb|CBG35251.1| 50S ribosomal protein L25 [Escherichia coli 042] gi|291427861|gb|EFF00888.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|291471017|gb|EFF13501.1| ribosomal L25p family protein [Escherichia coli B354] gi|294490536|gb|ADE89292.1| ribosomal L25p family [Escherichia coli IHE3034] gi|298278777|gb|EFI20291.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300299301|gb|EFJ55686.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|300307506|gb|EFJ62026.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300358469|gb|EFJ74339.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300398293|gb|EFJ81831.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|300408705|gb|EFJ92243.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|300459694|gb|EFK23187.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|305852094|gb|EFM52546.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|307626274|gb|ADN70578.1| 50S ribosomal protein L25 [Escherichia coli UM146] gi|312946805|gb|ADR27632.1| 50S ribosomal protein L25 [Escherichia coli O83:H1 str. NRG 857C] gi|315285739|gb|EFU45179.1| ribosomal L25p family protein [Escherichia coli MS 110-3] gi|315294445|gb|EFU53793.1| ribosomal L25p family protein [Escherichia coli MS 153-1] gi|315297947|gb|EFU57217.1| ribosomal L25p family protein [Escherichia coli MS 16-3] gi|320196059|gb|EFW70683.1| LSU ribosomal protein L25p [Escherichia coli WV_060327] gi|323188088|gb|EFZ73383.1| ribosomal L25p family protein [Escherichia coli RN587/1] gi|323951981|gb|EGB47855.1| ribosomal L25p family protein [Escherichia coli H252] gi|323955955|gb|EGB51708.1| ribosomal L25p family protein [Escherichia coli H263] gi|324006504|gb|EGB75723.1| ribosomal L25p family protein [Escherichia coli MS 57-2] gi|324013927|gb|EGB83146.1| ribosomal L25p family protein [Escherichia coli MS 60-1] gi|330912018|gb|EGH40528.1| LSU ribosomal protein L25p [Escherichia coli AA86] gi|331043565|gb|EGI15703.1| ribosomal L25p family protein [Escherichia coli M605] gi|331056514|gb|EGI28523.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331059489|gb|EGI31466.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331068980|gb|EGI40372.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331078817|gb|EGI50019.1| ribosomal L25p family protein [Escherichia coli H299] Length = 94 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 46/93 (49%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P + L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA 94 >gi|329298034|ref|ZP_08255370.1| 50S ribosomal protein L25 [Plautia stali symbiont] Length = 94 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 42/93 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAVSIELDHDAVMNMQAKPEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|262373268|ref|ZP_06066547.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] gi|262313293|gb|EEY94378.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] Length = 100 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R+ GKG++R LR QIPAIIYG ++P I L ++I K L S Sbjct: 1 MPMANFVLNAQAREAALQGKGASRRLRHASQIPAIIYGGSAEPVTITLELREIVKALESN 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + IG ++ +V + Q P + +HADF + Sbjct: 61 EFFEEVIEIKIGDKVENVKIQALQRHPAKNTPMHADFKRA 100 >gi|322514160|ref|ZP_08067225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] gi|322119946|gb|EFX91948.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] Length = 95 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 51/94 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIVLNHDNVNNAQIHDAFYSEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + HV + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEHVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|254360491|ref|ZP_04976640.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261492283|ref|ZP_05988846.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494504|ref|ZP_05990990.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091031|gb|EDN73036.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261309888|gb|EEY11105.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312062|gb|EEY13202.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 95 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 47/94 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ +F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQVHDSFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF + Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA 95 >gi|219870871|ref|YP_002475246.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] gi|254801050|sp|B8F4P6|RL25_HAEPS RecName: Full=50S ribosomal protein L25 gi|219691075|gb|ACL32298.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] Length = 95 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 46/94 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|82544597|ref|YP_408544.1| 50S ribosomal protein L25 [Shigella boydii Sb227] gi|109893394|sp|Q31YZ2|RL25_SHIBS RecName: Full=50S ribosomal protein L25 gi|81246008|gb|ABB66716.1| 50S ribosomal subunit protein L25 [Shigella boydii Sb227] gi|332093581|gb|EGI98639.1| ribosomal L25p family protein [Shigella boydii 3594-74] Length = 94 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + + + V +D Q P L H DF++ Sbjct: 62 AIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|16761165|ref|NP_456782.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765553|ref|NP_461168.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141140|ref|NP_804482.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412863|ref|YP_149938.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180811|ref|YP_217228.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613068|ref|YP_001587033.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551198|ref|ZP_02344953.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992549|ref|ZP_02573646.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229596|ref|ZP_02654654.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236413|ref|ZP_02661471.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242330|ref|ZP_02667262.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261757|ref|ZP_02683730.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818045|ref|ZP_02830045.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442256|ref|YP_002041499.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451948|ref|YP_002046279.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471162|ref|ZP_03077146.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735960|ref|YP_002115314.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251433|ref|YP_002147197.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262341|ref|ZP_03162415.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361794|ref|YP_002141430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245069|ref|YP_002216308.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387863|ref|ZP_03214475.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929202|ref|ZP_03220345.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857658|ref|YP_002244309.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213416568|ref|ZP_03349712.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424220|ref|ZP_03357079.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581647|ref|ZP_03363473.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612604|ref|ZP_03370430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646824|ref|ZP_03376877.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213851900|ref|ZP_03381432.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583278|ref|YP_002637076.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913794|ref|ZP_04657631.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824601|ref|ZP_06544144.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|68053011|sp|Q57MB4|RL25_SALCH RecName: Full=50S ribosomal protein L25 gi|68053042|sp|Q5PE20|RL25_SALPA RecName: Full=50S ribosomal protein L25 gi|68053181|sp|Q7CQ71|RL25_SALTY RecName: Full=50S ribosomal protein L25 gi|68053225|sp|Q8XFE7|RL25_SALTI RecName: Full=50S ribosomal protein L25 gi|189042369|sp|A9N6F6|RL25_SALPB RecName: Full=50S ribosomal protein L25 gi|226736359|sp|B5EYS6|RL25_SALA4 RecName: Full=50S ribosomal protein L25 gi|226736360|sp|B5FNN0|RL25_SALDC RecName: Full=50S ribosomal protein L25 gi|226736361|sp|B5R194|RL25_SALEP RecName: Full=50S ribosomal protein L25 gi|226736363|sp|B4TAP8|RL25_SALHS RecName: Full=50S ribosomal protein L25 gi|226736364|sp|B4SYR0|RL25_SALNS RecName: Full=50S ribosomal protein L25 gi|226736365|sp|B5BE12|RL25_SALPK RecName: Full=50S ribosomal protein L25 gi|226736366|sp|B4TPC7|RL25_SALSV RecName: Full=50S ribosomal protein L25 gi|254801060|sp|C0Q0R6|RL25_SALPC RecName: Full=50S ribosomal protein L25 gi|25295452|pir||AI0785 50s ribosomal protein L25 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420762|gb|AAL21127.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503463|emb|CAD02607.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi] gi|29136766|gb|AAO68331.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127120|gb|AAV76626.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128444|gb|AAX66147.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362432|gb|ABX66200.1| hypothetical protein SPAB_00776 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400919|gb|ACF61141.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410252|gb|ACF70471.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457526|gb|EDX46365.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711462|gb|ACF90683.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197093270|emb|CAR58716.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215136|gb|ACH52533.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240596|gb|EDY23216.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290557|gb|EDY29912.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939585|gb|ACH76918.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604961|gb|EDZ03506.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321746|gb|EDZ06945.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323963|gb|EDZ11802.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329203|gb|EDZ15967.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335818|gb|EDZ22582.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338300|gb|EDZ25064.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345061|gb|EDZ31825.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349319|gb|EDZ35950.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709461|emb|CAR33802.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467805|gb|ACN45635.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247436|emb|CBG25261.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994306|gb|ACY89191.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158785|emb|CBW18297.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913214|dbj|BAJ37188.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086668|emb|CBY96439.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224880|gb|EFX49943.1| LSU ribosomal protein L25p [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615251|gb|EFY12173.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617841|gb|EFY14737.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624564|gb|EFY21395.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626985|gb|EFY23781.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634170|gb|EFY30906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635637|gb|EFY32347.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640227|gb|EFY36891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646350|gb|EFY42862.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649317|gb|EFY45753.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656437|gb|EFY52726.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660680|gb|EFY56915.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665697|gb|EFY61881.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667223|gb|EFY63390.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671228|gb|EFY67356.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675131|gb|EFY71208.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680739|gb|EFY76774.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686914|gb|EFY82891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715288|gb|EFZ06859.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130554|gb|ADX17984.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192679|gb|EFZ77906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198889|gb|EFZ83988.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205100|gb|EFZ90078.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208143|gb|EFZ93087.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211196|gb|EFZ96042.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215831|gb|EGA00574.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221862|gb|EGA06262.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223802|gb|EGA08105.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231277|gb|EGA15392.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233710|gb|EGA17802.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237782|gb|EGA21842.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245763|gb|EGA29757.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246497|gb|EGA30476.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252604|gb|EGA36443.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255328|gb|EGA39101.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259563|gb|EGA43198.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266060|gb|EGA49553.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272754|gb|EGA56158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624059|gb|EGE30404.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989158|gb|AEF08141.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 94 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA 94 >gi|206577853|ref|YP_002237395.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288934321|ref|YP_003438380.1| ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|290508524|ref|ZP_06547895.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] gi|226736332|sp|B5XP25|RL25_KLEP3 RecName: Full=50S ribosomal protein L25 gi|206566911|gb|ACI08687.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288889050|gb|ADC57368.1| Ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|289777918|gb|EFD85915.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] Length = 94 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 42/93 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F ++ Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKLWNMQDKAEFYGEVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++ Sbjct: 62 TLVIDGKEEKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|168466077|ref|ZP_02699947.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631317|gb|EDX49877.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 94 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPVAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA 94 >gi|91792860|ref|YP_562511.1| ribosomal protein L25 [Shewanella denitrificans OS217] gi|123166239|sp|Q12P38|RL25_SHEDO RecName: Full=50S ribosomal protein L25 gi|91714862|gb|ABE54788.1| LSU ribosomal protein L25P [Shewanella denitrificans OS217] Length = 95 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 50/94 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F T+ Sbjct: 2 SYTIQAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEPMVIVFDQKDIINIQANADFYTSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +TL + + V V K Q ++ HADF+ V Sbjct: 62 VTLVVDGKDVKVRAKAMQRHAFKPLIEHADFMFV 95 >gi|290475893|ref|YP_003468786.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] gi|289175219|emb|CBJ82022.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] Length = 93 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAIIYG +P I L + F +L Sbjct: 2 LTINAEVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHESKPEFY-EVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + V + Q P L H DFL+ Sbjct: 61 NLVVDGKETTVKVQAVQRHPFKPKLTHIDFLRA 93 >gi|332093192|gb|EGI98252.1| ribosomal L25p family protein [Shigella boydii 5216-82] Length = 94 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 46/93 (49%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L+ + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELAHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA 94 >gi|294140651|ref|YP_003556629.1| 50S ribosomal protein L25 [Shewanella violacea DSS12] gi|293327120|dbj|BAJ01851.1| ribosomal protein L25 [Shewanella violacea DSS12] Length = 95 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 48/91 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I + KDI +K+F T Sbjct: 2 SYTIAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKESISIKFNQKDIINIQENKDFFTGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ I + + V + Q ++ H DF Sbjct: 62 LTIAIDGKEIKVRVQAMQRHAFKALIEHVDF 92 >gi|126640884|ref|YP_001083868.1| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|184157106|ref|YP_001845445.1| 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260555727|ref|ZP_05827947.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332872682|ref|ZP_08440650.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] gi|183208700|gb|ACC56098.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260410638|gb|EEX03936.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332739211|gb|EGJ70070.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] Length = 103 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 6 MAN--FVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESN 63 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 64 AFFEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA 103 >gi|237732238|ref|ZP_04562719.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] gi|226907777|gb|EEH93695.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] Length = 94 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V V + Q P L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHPFKPKLSHIDFVRA 94 >gi|262280067|ref|ZP_06057852.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] gi|262260418|gb|EEY79151.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] Length = 98 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR IPAIIYG ++P I L + + K L + Sbjct: 1 MSN--FVLNAQARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRQLVKALENN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 AFFQEVIEIQVGDKVENVKIQALQRHPAKNTPMHADFKRA 98 >gi|226330603|ref|ZP_03806121.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] gi|225201398|gb|EEG83752.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] Length = 94 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + + Sbjct: 2 LTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYSDFV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V K Q + H DFL+ Sbjct: 62 NLVIDGKETKVKVKAVQRHEYKPKITHIDFLRA 94 >gi|33152342|ref|NP_873695.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] gi|68053197|sp|Q7VLY6|RL25_HAEDU RecName: Full=50S ribosomal protein L25 gi|33148565|gb|AAP96084.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] Length = 95 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNVQIHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + ++ V V + Q P L+H DF +V Sbjct: 62 LTIVLAEKEVQVKVQAIQRHPTKPKLLHLDFKRV 95 >gi|261340617|ref|ZP_05968475.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] gi|288317028|gb|EFC55966.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] Length = 94 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRNANKFPAIVYGGEAAPVAIELDHDKVWNMQTKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ +G + V + Q P L H DF++ Sbjct: 62 TIVVGGKEEKVKVQAVQRHPFKPKLSHIDFVRA 94 >gi|161502616|ref|YP_001569728.1| 50S ribosomal protein L25 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189042368|sp|A9MK27|RL25_SALAR RecName: Full=50S ribosomal protein L25 gi|160863963|gb|ABX20586.1| hypothetical protein SARI_00663 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 94 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAFKPKLTHIDFIRA 94 >gi|205353357|ref|YP_002227158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226736362|sp|B5RC63|RL25_SALG2 RecName: Full=50S ribosomal protein L25 gi|205273138|emb|CAR38095.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628446|gb|EGE34789.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 94 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRTANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA 94 >gi|224533422|ref|ZP_03674015.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] gi|224513384|gb|EEF83742.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] Length = 136 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 3/136 (2%) Query: 50 DISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 + +K+ ++K T+L LD GK V KD + S ++ H DF +V + +VP Sbjct: 3 EFNKK-FAKFTDNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVP 61 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 ++ I S G+K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 62 IKLIG--ASIGVKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPS 119 Query: 170 KTSSMSQLNITIATIV 185 I+ Sbjct: 120 NVRLAENDENLEVVII 135 >gi|260550954|ref|ZP_05825159.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] gi|260405902|gb|EEW99389.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] Length = 103 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M +A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 6 MAN--FVFNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVSVTLELRELVKALESN 63 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 64 AFFEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKRA 103 >gi|167856183|ref|ZP_02478921.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] gi|167852705|gb|EDS23981.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] Length = 95 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 46/94 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQVHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|169634104|ref|YP_001707840.1| 50S ribosomal protein L25 [Acinetobacter baumannii SDF] gi|169152896|emb|CAP01934.1| 50S ribosomal protein L25 [Acinetobacter baumannii] Length = 103 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 6 MAN--FVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVTVTLELRELVKALESN 63 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 64 AFFEKVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA 103 >gi|294637091|ref|ZP_06715405.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] gi|291089719|gb|EFE22280.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 113 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG D I L F +L Sbjct: 2 LTINAEVRNEQGKGASRRLRSAGKFPAIVYGGKEDALTITLDHDSTMNMSEKDGFYGEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + + V + Q P L H DF++ Sbjct: 62 TLVVDGKEIKVKVQAVQRHPYKPKLSHIDFVRA 94 >gi|256370610|ref|YP_003108435.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] gi|256009402|gb|ACU52762.1| ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] Length = 199 Score = 113 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL 73 +K+ K S R LR +G +P +IY ++ + K L N+ L + Sbjct: 10 EKIKKKSNRELRNSGYVPCVIY-RKKKNITFSVLISTLKKNLLKMNYYKIYLKIK-NYYK 67 Query: 74 VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE 133 + I K+ Q P+++ +IH DF ++ + + T+ +P I+E S G+ +GG+ + + Sbjct: 68 MEAILKEIQFHPITENVIHVDFYELKKKNKYTISIP--LISEGHSIGVSKGGEYKLFLKK 125 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + L I +++++L+IG++ +++ I P+ + IA++ Sbjct: 126 IKLKILKYFFLKKIFLNISNLEIGNNFYLKKIYNPKYI-LLHFKKEVIASVFP 177 >gi|170767283|ref|ZP_02901736.1| ribosomal L25p family [Escherichia albertii TW07627] gi|170123617|gb|EDS92548.1| ribosomal L25p family [Escherichia albertii TW07627] Length = 94 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 47/93 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P +AL + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRTANKFPAIIYGGNEAPLAVALGHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA 94 >gi|291546340|emb|CBL19448.1| ribosomal protein L25, Ctc-form [Ruminococcus sp. SR1/5] Length = 195 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ K A+ LR+ G + I+ G +P + + +K + + N T Sbjct: 2 ITLKAEKRNPNVK--AKKLRREGYVTGILSGKEMKEPVALQFDGAEAAKFIKA-NKEGTQ 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E V + K+ +P+ L+ DF + G V+ V V+ + + GI Sbjct: 59 IYLDIEGEKVDALVKNIDYNPIEKQLMALDFQALVAGEKVSTTVAVKLEHTDMVQGI--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDL--KIGDSIHMEDIRLPEK--TSSMSQLNIT 180 + E+ N+ D+I +D N + D IH++D+ +PE ++ + Sbjct: 116 --VEQEMEEIHYKADPANLLDTIVIDFNGYPADVRD-IHVKDLPIPEGKQVHFITPEDAV 172 Query: 181 IATI 184 + I Sbjct: 173 VVHI 176 >gi|283785997|ref|YP_003365862.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] gi|282949451|emb|CBG89064.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] Length = 94 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPIAIELDHDQVMNMQVKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVRA 94 >gi|300724001|ref|YP_003713315.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] gi|297630532|emb|CBJ91197.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] Length = 93 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAIIYG +P I L + F ++ Sbjct: 2 LTINATVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHENKPEFY-EVM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DFL+ Sbjct: 61 TLVVDGKETKVKVQAVQRHPFKPKLTHIDFLRA 93 >gi|261346081|ref|ZP_05973725.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] gi|282565733|gb|EFB71268.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] Length = 93 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PA++YG + + L+ +I + SK IL Sbjct: 2 LTINAIERKEQGKGASRRLRRANQLPAVVYGGNQEAISVTLNHDEIINQ-ESKAGFYDIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V + Q P + H DFL+ Sbjct: 61 NLVIDGKETKVKVQAVQRHPFKPKVTHIDFLRA 93 >gi|239501213|ref|ZP_04660523.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii AB900] gi|226736751|sp|A3M2X2|RL25_ACIBT RecName: Full=50S ribosomal protein L25 gi|193076600|gb|ABO11266.2| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|322507005|gb|ADX02459.1| rplY [Acinetobacter baumannii 1656-2] gi|323516872|gb|ADX91253.1| 50S ribosomal protein L25 [Acinetobacter baumannii TCDC-AB0715] Length = 98 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 1 MAN--FVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 AFFEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA 98 >gi|15641645|ref|NP_231277.1| 50S ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591191|ref|ZP_01678494.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121728910|ref|ZP_01681917.1| ribosomal protein L25 [Vibrio cholerae V52] gi|147673862|ref|YP_001217190.1| 50S ribosomal protein L25 [Vibrio cholerae O395] gi|153216905|ref|ZP_01950669.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|153801556|ref|ZP_01956142.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|153819731|ref|ZP_01972398.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|153823940|ref|ZP_01976607.1| ribosomal protein L25 [Vibrio cholerae B33] gi|153826166|ref|ZP_01978833.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|227081792|ref|YP_002810343.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|229523735|ref|ZP_04413140.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254226742|ref|ZP_04920317.1| ribosomal protein L25 [Vibrio cholerae V51] gi|254285416|ref|ZP_04960381.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|254848760|ref|ZP_05238110.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255744931|ref|ZP_05418881.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258621917|ref|ZP_05716947.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|258624936|ref|ZP_05719863.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|261211762|ref|ZP_05926049.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|262161784|ref|ZP_06030802.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262165815|ref|ZP_06033552.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262169654|ref|ZP_06037345.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262171350|ref|ZP_06039028.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262190569|ref|ZP_06048810.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262404058|ref|ZP_06080613.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297579219|ref|ZP_06941147.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|298498277|ref|ZP_07008084.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] gi|68053239|sp|Q9KRK0|RL25_VIBCH RecName: Full=50S ribosomal protein L25 gi|172047678|sp|A5F7P6|RL25_VIBC3 RecName: Full=50S ribosomal protein L25 gi|254801066|sp|C3LMW6|RL25_VIBCM RecName: Full=50S ribosomal protein L25 gi|9656153|gb|AAF94791.1| ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546946|gb|EAX57094.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121628796|gb|EAX61258.1| ribosomal protein L25 [Vibrio cholerae V52] gi|124114054|gb|EAY32874.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|124122883|gb|EAY41626.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|125620719|gb|EAZ49078.1| ribosomal protein L25 [Vibrio cholerae V51] gi|126509722|gb|EAZ72316.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|126518534|gb|EAZ75757.1| ribosomal protein L25 [Vibrio cholerae B33] gi|146315745|gb|ABQ20284.1| ribosomal protein L25 [Vibrio cholerae O395] gi|149740107|gb|EDM54272.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|150424688|gb|EDN16624.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|227009680|gb|ACP05892.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|227013548|gb|ACP09758.1| ribosomal protein L25 [Vibrio cholerae O395] gi|229337316|gb|EEO02333.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254844465|gb|EET22879.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255737402|gb|EET92797.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258582792|gb|EEW07614.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|258585855|gb|EEW10574.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|260839112|gb|EEX65744.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|261892426|gb|EEY38412.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262021888|gb|EEY40598.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262025531|gb|EEY44199.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262028516|gb|EEY47171.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262033556|gb|EEY52053.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262349090|gb|EEY98228.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297536813|gb|EFH75646.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|297542610|gb|EFH78660.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] Length = 92 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F I+ Sbjct: 1 MKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 61 -LVIDGQEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|327484250|gb|AEA78657.1| LSU ribosomal protein L25p [Vibrio cholerae LMA3894-4] Length = 92 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F I+ Sbjct: 1 MKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 61 -LVIDGQEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|146312423|ref|YP_001177497.1| 50S ribosomal protein L25P [Enterobacter sp. 638] gi|166987893|sp|A4WCL6|RL25_ENT38 RecName: Full=50S ribosomal protein L25 gi|145319299|gb|ABP61446.1| LSU ribosomal protein L25P [Enterobacter sp. 638] Length = 94 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R GKG++R LR + PAIIYG + P I + + + + F T +L Sbjct: 2 FTINAEVRAVQGKGASRRLRAANKFPAIIYGGEAAPVAIEMDQDKVWNQQTKEGFYTEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ I + V + Q P L H DF++ Sbjct: 62 TIVIDGKEEKVKVQAVQRHPFKPKLSHVDFVRA 94 >gi|262040201|ref|ZP_06013453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330015786|ref|ZP_08308278.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] gi|259042438|gb|EEW43457.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328530487|gb|EGF57360.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] Length = 94 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKVWNMQDKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V + Q L H DF++ Sbjct: 62 TVVVDGKEEKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|320539362|ref|ZP_08039031.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] gi|320030487|gb|EFW12497.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] Length = 94 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG P I L + F + + Sbjct: 2 FTINAQVRKEQGKGASRRLRAANKFPAIVYGGEEAPVSIELGQDYVKNMAVKPEFYSKTI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + +V + Q P L H DF++V Sbjct: 62 TLVIDGKETNVKVQAIQRHPFKPKLTHIDFVRV 94 >gi|157144862|ref|YP_001452180.1| 50S ribosomal protein L25 [Citrobacter koseri ATCC BAA-895] gi|166223675|sp|A8AE31|RL25_CITK8 RecName: Full=50S ribosomal protein L25 gi|157082067|gb|ABV11745.1| hypothetical protein CKO_00591 [Citrobacter koseri ATCC BAA-895] Length = 94 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVRA 94 >gi|293977771|ref|YP_003543201.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri DMIN] gi|292667702|gb|ADE35337.1| ribosomal protein L25, Ctc-form [Candidatus Sulcia muelleri DMIN] Length = 186 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 9/165 (5%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE-LVHVIPK 79 R LR G IP I+YG + + K +Y+ + L+I E + + K Sbjct: 19 NRELRNYGYIPCIVYGINK-NIKFYILLSILKKVIYT----FKVYKLEIKNEYKIEALLK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + Q +P++D +IH DF ++ + + + VP+ + S G+ +GG+ + +++L Sbjct: 74 EIQFNPINDDVIHVDFYELKKNKYIIISVPIISVGH--SLGVSKGGEYKIFIKKINLKVI 131 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I D + +D+++L IGD++ +++I P+ + N IA++ Sbjct: 132 PEFILDHMDIDISNLDIGDNLSIKNIYNPKYI-ILHNCNDVIASV 175 >gi|152971157|ref|YP_001336266.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895745|ref|YP_002920481.1| 50S ribosomal protein L25 [Klebsiella pneumoniae NTUH-K2044] gi|166223691|sp|A6TBR5|RL25_KLEP7 RecName: Full=50S ribosomal protein L25 gi|150956006|gb|ABR78036.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548063|dbj|BAH64414.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 94 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAAAPVAIELDHDKVWNMQDKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V + Q L H DF++ Sbjct: 62 TVVVDGKEEKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|212712413|ref|ZP_03320541.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] gi|212685159|gb|EEB44687.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] Length = 93 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ +I + F +L Sbjct: 2 LTINAIERKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEIINQESKAEFY-EVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P + H DFL+ Sbjct: 61 TLVIDGKETKVKVQAVQRHPFKPKVTHIDFLRA 93 >gi|283832377|ref|ZP_06352118.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] gi|291072027|gb|EFE10136.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] Length = 94 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVRA 94 >gi|197284710|ref|YP_002150582.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] gi|226736351|sp|B4ET93|RL25_PROMH RecName: Full=50S ribosomal protein L25 gi|194682197|emb|CAR41879.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] Length = 94 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + Sbjct: 2 LTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYADFV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V K Q + H DFL+ Sbjct: 62 NLVIDGKATKVKVKAVQRHEYKPKITHIDFLRA 94 >gi|255318851|ref|ZP_05360077.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262378891|ref|ZP_06072048.1| ribosomal L25p [Acinetobacter radioresistens SH164] gi|255304107|gb|EET83298.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262300176|gb|EEY88088.1| ribosomal L25p [Acinetobacter radioresistens SH164] Length = 98 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R D GKG++R LR Q+PAIIYG ++P I L + + K L + Sbjct: 1 MAN--FTLNAQARAADVQGKGASRRLRHAAQLPAIIYGGDAEPVAITLELRQLVKALENN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G + V + Q P + +HADF + Sbjct: 59 AFFEEVIEIVVGDKTESVKIQALQRHPAKNTPMHADFKRA 98 >gi|293609064|ref|ZP_06691367.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|292829637|gb|EFF87999.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|325121162|gb|ADY80685.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus PHEA-2] Length = 98 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ IPAIIYG ++P + L +++ K L S Sbjct: 1 MAN--FVLNAQARAEDKQGKGASRRLRREALIPAIIYGGNAEPVTVTLELRELVKALESN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 AFFEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKRA 98 >gi|183599528|ref|ZP_02961021.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] gi|188021775|gb|EDU59815.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] Length = 93 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ ++ + F +L Sbjct: 2 LTINAIARKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEVINQEGKAEFY-EVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +L I + V + Q P + H DFL+V Sbjct: 61 SLVIDGKETKVKVQAIQRHPFKPKVTHIDFLRV 93 >gi|169796981|ref|YP_001714774.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332852069|ref|ZP_08433896.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332867467|ref|ZP_08437620.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] gi|169149908|emb|CAM87802.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332729441|gb|EGJ60780.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332733884|gb|EGJ65029.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] Length = 103 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 6 MAN--FVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESN 63 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 64 VFFEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA 103 >gi|253688023|ref|YP_003017213.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646692|sp|C6DEJ2|RL25_PECCP RecName: Full=50S ribosomal protein L25 gi|251754601|gb|ACT12677.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 94 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R GKG++R LR G+ PAI+YG P I L + + + F T L Sbjct: 2 ITIKAEVRKDQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEAKEGFYGTAL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|299771339|ref|YP_003733365.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] gi|298701427|gb|ADI91992.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] Length = 98 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR IPAIIYG ++P I L +++ K L + Sbjct: 1 MAN--FVLNAQARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRELVKALENN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 AFFEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKRA 98 >gi|149189635|ref|ZP_01867917.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] gi|148836447|gb|EDL53402.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] Length = 92 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PAI+YG + P IAL+ D+ ++ F I Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIALNHDDVINQMDKPAFYEGI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|268591197|ref|ZP_06125418.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] gi|291313428|gb|EFE53881.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] Length = 93 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR++ Q+PAI+YG + + L+ +I + F +L Sbjct: 2 LTINAIERKEQGKGASRRLRRDNQLPAIVYGGNQEAISVTLNHDEIINQESKAEFY-EVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V + Q P + H DFL+ Sbjct: 61 NLVIDGKETKVKVQAVQRHPFKPKVTHIDFLRA 93 >gi|296103843|ref|YP_003613989.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058302|gb|ADF63040.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 94 Score = 111 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVSIELDHDKVWNMQTKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ +G + V + Q L H DF++ Sbjct: 62 TIVVGGKEEKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|213156613|ref|YP_002318274.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|215484443|ref|YP_002326676.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] gi|301348151|ref|ZP_07228892.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB056] gi|301512834|ref|ZP_07238071.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB058] gi|301596892|ref|ZP_07241900.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB059] gi|226736701|sp|B7GYQ9|RL25_ACIB3 RecName: Full=50S ribosomal protein L25 gi|226736702|sp|B7I7B6|RL25_ACIB5 RecName: Full=50S ribosomal protein L25 gi|213055773|gb|ACJ40675.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|213986765|gb|ACJ57064.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] Length = 98 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S Sbjct: 1 MAN--FVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 VFFEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA 98 >gi|59711469|ref|YP_204245.1| 50S ribosomal protein L25 [Vibrio fischeri ES114] gi|68053021|sp|Q5E6I9|RL25_VIBF1 RecName: Full=50S ribosomal protein L25 gi|59479570|gb|AAW85357.1| 50S ribosomal subunit protein L25 [Vibrio fischeri ES114] Length = 92 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR G+ PAI+YG P IAL + ++ F I Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 ELVIDGAAVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|50085939|ref|YP_047449.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] gi|49531915|emb|CAG69627.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] Length = 103 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R++ GKG++R LR+ +PAIIYG ++P + + +++ K L + Sbjct: 6 MAN--FVLNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENN 63 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 64 AFFEEVVEVKVGDKVENVKIQALQRHPAKNTPMHADFKRA 103 >gi|27366131|ref|NP_761659.1| 50S ribosomal protein L25 [Vibrio vulnificus CMCP6] gi|37679604|ref|NP_934213.1| 50S ribosomal protein L25 [Vibrio vulnificus YJ016] gi|320156643|ref|YP_004189022.1| 50S ribosomal protein L25p [Vibrio vulnificus MO6-24/O] gi|68053194|sp|Q7MLK7|RL25_VIBVY RecName: Full=50S ribosomal protein L25 gi|68053215|sp|Q8D8W6|RL25_VIBVU RecName: Full=50S ribosomal protein L25 gi|27362331|gb|AAO11186.1| LSU ribosomal protein L25p [Vibrio vulnificus CMCP6] gi|37198348|dbj|BAC94184.1| ribosomal protein L25 [Vibrio vulnificus YJ016] gi|319931955|gb|ADV86819.1| LSU ribosomal protein L25p [Vibrio vulnificus MO6-24/O] Length = 92 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PA++YG + P +AL+ DI ++ F I Sbjct: 1 MKFEAVVRTELGKGASRRLRLAGQFPAVVYGGEAAPVAVALNHDDIVNQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG E V V P+D Q + H DF+++ Sbjct: 60 TLVIGGEEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|22126797|ref|NP_670220.1| 50S ribosomal protein L25 [Yersinia pestis KIM 10] gi|45441151|ref|NP_992690.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51595640|ref|YP_069831.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108806978|ref|YP_650894.1| 50S ribosomal protein L25 [Yersinia pestis Antiqua] gi|108812873|ref|YP_648640.1| 50S ribosomal protein L25 [Yersinia pestis Nepal516] gi|145599702|ref|YP_001163778.1| 50S ribosomal protein L25 [Yersinia pestis Pestoides F] gi|149366752|ref|ZP_01888786.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|153949273|ref|YP_001401685.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162418620|ref|YP_001606000.1| 50S ribosomal protein L25 [Yersinia pestis Angola] gi|165924387|ref|ZP_02220219.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165936355|ref|ZP_02224924.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|166009819|ref|ZP_02230717.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211351|ref|ZP_02237386.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|167400243|ref|ZP_02305756.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419427|ref|ZP_02311180.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423846|ref|ZP_02315599.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025020|ref|YP_001721525.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186894710|ref|YP_001871822.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|218928418|ref|YP_002346293.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|229841213|ref|ZP_04461372.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843318|ref|ZP_04463464.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229894381|ref|ZP_04509564.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|229903301|ref|ZP_04518414.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|270487105|ref|ZP_06204179.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|68053091|sp|Q66CV3|RL25_YERPS RecName: Full=50S ribosomal protein L25 gi|68053227|sp|Q8ZGM4|RL25_YERPE RecName: Full=50S ribosomal protein L25 gi|123073260|sp|Q1CG40|RL25_YERPN RecName: Full=50S ribosomal protein L25 gi|123245899|sp|Q1C9C3|RL25_YERPA RecName: Full=50S ribosomal protein L25 gi|166223733|sp|A4TNE3|RL25_YERPP RecName: Full=50S ribosomal protein L25 gi|166987895|sp|A7FKA7|RL25_YERP3 RecName: Full=50S ribosomal protein L25 gi|226694606|sp|B2K9F2|RL25_YERPB RecName: Full=50S ribosomal protein L25 gi|226694608|sp|A9R3I4|RL25_YERPG RecName: Full=50S ribosomal protein L25 gi|226694609|sp|B1JS45|RL25_YERPY RecName: Full=50S ribosomal protein L25 gi|21959824|gb|AAM86471.1|AE013894_6 50S ribosomal subunit protein L25 [Yersinia pestis KIM 10] gi|45436011|gb|AAS61567.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51588922|emb|CAH20539.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108776521|gb|ABG19040.1| LSU ribosomal protein L25P [Yersinia pestis Nepal516] gi|108778891|gb|ABG12949.1| LSU ribosomal protein L25P [Yersinia pestis Antiqua] gi|115347029|emb|CAL19921.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|145211398|gb|ABP40805.1| LSU ribosomal protein L25P [Yersinia pestis Pestoides F] gi|149291126|gb|EDM41201.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|152960768|gb|ABS48229.1| ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162351435|gb|ABX85383.1| ribosomal protein L25 [Yersinia pestis Angola] gi|165915969|gb|EDR34577.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|165923447|gb|EDR40579.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165991215|gb|EDR43516.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207122|gb|EDR51602.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962168|gb|EDR58189.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050192|gb|EDR61600.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056695|gb|EDR66458.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751554|gb|ACA69072.1| ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186697736|gb|ACC88365.1| ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|229679071|gb|EEO75174.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|229689665|gb|EEO81726.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229697579|gb|EEO87626.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703779|gb|EEO90795.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|270335609|gb|EFA46386.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|320015891|gb|ADV99462.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 94 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIVYGGSEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|148979342|ref|ZP_01815474.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] gi|145961882|gb|EDK27174.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] Length = 92 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L+ ++ ++ F I Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVSIELNHDEVINQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLLIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|238757898|ref|ZP_04619080.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238789717|ref|ZP_04633500.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238794238|ref|ZP_04637852.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] gi|238703883|gb|EEP96418.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238722270|gb|EEQ13927.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238726420|gb|EEQ17960.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] Length = 94 Score = 110 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|291618131|ref|YP_003520873.1| RplY [Pantoea ananatis LMG 20103] gi|291153161|gb|ADD77745.1| RplY [Pantoea ananatis LMG 20103] gi|327394530|dbj|BAK11952.1| 50S ribosomal protein L25 RplY [Pantoea ananatis AJ13355] Length = 94 Score = 110 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINAVERKEQGKGASRRLRAANRFPAIIYGGSEAAVAIDLDHDQVMNLQTKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|197335111|ref|YP_002155624.1| ribosomal L25p family protein [Vibrio fischeri MJ11] gi|226694584|sp|B5FCG1|RL25_VIBFM RecName: Full=50S ribosomal protein L25 gi|197316601|gb|ACH66048.1| ribosomal L25p family protein [Vibrio fischeri MJ11] Length = 92 Score = 110 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR GQ PAI+YG P IAL + ++ F I Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGQFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I +V V P+D Q + H DF+++ Sbjct: 60 ELVIDGAVVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|330446122|ref|ZP_08309774.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490313|dbj|GAA04271.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 92 Score = 110 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR G P I+YG + P I L D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLEGLFPGIVYGGEAAPVAITLKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|71153114|sp|Q6F8I8|RL25_ACIAD RecName: Full=50S ribosomal protein L25 Length = 98 Score = 110 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R++ GKG++R LR+ +PAIIYG ++P + + +++ K L + Sbjct: 1 MAN--FVLNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENN 58 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ +V + Q P + +HADF + Sbjct: 59 AFFEEVVEVKVGDKVENVKIQALQRHPAKNTPMHADFKRA 98 >gi|308187560|ref|YP_003931691.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] gi|308058070|gb|ADO10242.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] Length = 94 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 LTINAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQAKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLSVDGKETKVKVQAVQRHPFKPKLFHIDFVRA 94 >gi|262369401|ref|ZP_06062729.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] gi|262315469|gb|EEY96508.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] Length = 101 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R+ GKG++R LR Q+PAIIYG + P + L +++ K L + Sbjct: 4 MAN--FVLNAQAREAANQGKGASRRLRHAAQVPAIIYGGTAKPVAVTLELRELVKALENN 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++ + +G ++ V K Q P + +HADF++ Sbjct: 62 AFFEEVVEIKVGDKVESVKIKALQRHPAKNTPMHADFVRA 101 >gi|50121669|ref|YP_050836.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] gi|68053132|sp|Q6D3J9|RL25_ERWCT RecName: Full=50S ribosomal protein L25 gi|49612195|emb|CAG75645.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] Length = 94 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + + F L Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|295098121|emb|CBK87211.1| LSU ribosomal protein L25P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 94 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 42/93 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVAIELDHDKVWNMQNKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+ + + V + Q L H DF++ Sbjct: 62 TIVVDGKEEKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|304397508|ref|ZP_07379386.1| Ribosomal protein L25-like protein [Pantoea sp. aB] gi|304355126|gb|EFM19495.1| Ribosomal protein L25-like protein [Pantoea sp. aB] Length = 94 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 LTINAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQSKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLSVDGKETKVKVQAVQRHPFKPKLFHIDFVRA 94 >gi|262275816|ref|ZP_06053625.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] gi|262219624|gb|EEY70940.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] Length = 92 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R K GKG++R LR + PA++YG + P IAL + ++ F I Sbjct: 1 MKFEAVVRTKQGKGASRRLRHADKFPAVVYGGEAAPVAIALDHSKVITQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q P ++H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDIQRHPFKPKVMHMDFIRI 92 >gi|269102758|ref|ZP_06155455.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] gi|268162656|gb|EEZ41152.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] Length = 92 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F ++ Sbjct: 1 MKFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEAPVAIVLDHDSVINQMDKPAFY-EVI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V P+D Q P + H DF +V Sbjct: 60 TLVIDGKEVQVKPQDIQRHPYKPKVNHMDFNRV 92 >gi|238784262|ref|ZP_04628274.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] gi|238714829|gb|EEQ06829.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] Length = 94 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTIKVEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|300717594|ref|YP_003742397.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] gi|299063430|emb|CAX60550.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] Length = 94 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG P I L + F T +L Sbjct: 2 FTINVEERKEQGKGASRRLRLANKFPAIIYGGEVAPIAIELDHDSVMNIQAKPGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVNGKEEKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|260772946|ref|ZP_05881862.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] gi|260612085|gb|EEX37288.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] Length = 92 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R ++GKG++R LR G PAI+YG + P IAL D+ ++ F I Sbjct: 1 MKFNAVVRTELGKGASRRLRHTGLFPAIVYGGEAAPVSIALKHDDVINQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGTEVKVKPQDVQRHVFKPKVEHMDFIRI 92 >gi|261253125|ref|ZP_05945698.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] gi|260936516|gb|EEX92505.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] Length = 92 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG + P I L+ ++ ++ F I Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAPVAIVLTHDEVMNQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|296085755|emb|CBI29566.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 9/146 (6%) Query: 50 DISKRLYSKNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 I K + + +T L I E V+P D + +++ F EG Sbjct: 21 AILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWADEG 80 Query: 102 STVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 S + V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD I Sbjct: 81 SELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGDRIL 140 Query: 162 MEDIRLPEKTSSMSQLNI-TIATIVA 186 M D+ + +S+ + IVA Sbjct: 141 MHDVEVHPSLKLLSKNETMPVCKIVA 166 >gi|259907985|ref|YP_002648341.1| 50S ribosomal protein L25 [Erwinia pyrifoliae Ep1/96] gi|224963607|emb|CAX55100.1| 50S ribosomal subunit protein L25 [Erwinia pyrifoliae Ep1/96] gi|283477872|emb|CAY73788.1| 50S ribosomal protein L25 [Erwinia pyrifoliae DSM 12163] gi|310768106|gb|ADP13056.1| 50S ribosomal protein L25 [Erwinia sp. Ejp617] Length = 94 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 39/93 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|238753023|ref|ZP_04614480.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] gi|238708744|gb|EEQ01005.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] Length = 94 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALDHDTTKNLEIKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|311278832|ref|YP_003941063.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] gi|308748027|gb|ADO47779.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] Length = 94 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +R + GKG++R LR ++PAIIYG + P + L + F + +L Sbjct: 2 FTFDVAVRKEQGKGASRRLRAANKVPAIIYGGAAAPVSVELDHDKVFNAQAKTEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q + H DF++ Sbjct: 62 TLVIDGKEEKVKVQAVQRHAYKPKVTHIDFVRA 94 >gi|188533402|ref|YP_001907199.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] gi|226736320|sp|B2VII8|RL25_ERWT9 RecName: Full=50S ribosomal protein L25 gi|188028444|emb|CAO96306.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] Length = 94 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 39/93 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|238796850|ref|ZP_04640355.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] gi|238719338|gb|EEQ11149.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] Length = 94 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNLEIKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|261821188|ref|YP_003259294.1| 50S ribosomal protein L25 [Pectobacterium wasabiae WPP163] gi|261605201|gb|ACX87687.1| Ribosomal protein L25-like protein [Pectobacterium wasabiae WPP163] Length = 94 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + F L Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKDGFYGETL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|260768249|ref|ZP_05877183.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|260616279|gb|EEX41464.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|315179957|gb|ADT86871.1| 50S ribosomal protein L25 [Vibrio furnissii NCTC 11218] Length = 92 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G PAI+YG + P I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRNTGNFPAIVYGGEAAPVSITLNHDDIVNQMDKPEFYEAIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|292488791|ref|YP_003531678.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|292899942|ref|YP_003539311.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291199790|emb|CBJ46911.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291554225|emb|CBA21495.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|312172944|emb|CBX81199.1| 50S ribosomal protein L25 [Erwinia amylovora ATCC BAA-2158] Length = 94 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 39/93 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVLNLQSKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVRA 94 >gi|238755440|ref|ZP_04616781.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] gi|238706377|gb|EEP98753.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] Length = 94 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R+ GKG++R LR + PAI+YG IAL F + Sbjct: 2 ITINAEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNMELKPGFYNEPV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ALVIDGKEVKVQVQAVQRHAFKPKLTHIDFVRV 94 >gi|270262760|ref|ZP_06191031.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] gi|270043444|gb|EFA16537.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] Length = 94 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 39/93 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R GKG++R LR + PAI+YG I L + F + + Sbjct: 2 FTINVQVRKDQGKGASRRLRAANKFPAIVYGGEEAAVSIELDHDSVKNMEAKPEFYSEAV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P L H DF++ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLTHIDFVRA 94 >gi|238761997|ref|ZP_04622970.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] gi|238699725|gb|EEP92469.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] Length = 94 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG I L F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEPAIAITLDHDTTKNIELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|262376651|ref|ZP_06069879.1| ribosomal L25p [Acinetobacter lwoffii SH145] gi|262308361|gb|EEY89496.1| ribosomal L25p [Acinetobacter lwoffii SH145] Length = 101 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R++ GKG++R LR ++PAIIYG + P I + + + K L + Sbjct: 4 MAN--FVLNAAAREEAVQGKGASRRLRLQAKVPAIIYGGEAAPVAITVELRQLVKFLENN 61 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +F ++ +D+ ++ V + Q P + +HADF + Sbjct: 62 SFFEEVIEIDVDGKVESVKIQALQRHPAKNTPMHADFKRA 101 >gi|405949|gb|AAA16413.1| rplY [Escherichia coli] Length = 96 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDI 89 T+ + + + V +D Q P Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPK 85 >gi|312885156|ref|ZP_07744836.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367169|gb|EFP94741.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] Length = 92 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDIVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + + V P+D Q + H DF+++ Sbjct: 61 -LVIDGKELKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|209695530|ref|YP_002263459.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] gi|226736274|sp|B6EI32|RL25_ALISL RecName: Full=50S ribosomal protein L25 gi|208009482|emb|CAQ79769.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] Length = 92 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR G+ PAI+YG P I L D+ ++ F I Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIELIHFDVINQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 ELVIDGATVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|163801136|ref|ZP_02195036.1| 50S ribosomal protein L25 [Vibrio sp. AND4] gi|159175485|gb|EDP60282.1| 50S ribosomal protein L25 [Vibrio sp. AND4] Length = 92 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +VGKG++R LR G+ PA++YG ++ I L DI ++ F I+ Sbjct: 1 MKFEAVVRTEVGKGASRRLRHAGKFPAVVYGGEAEAVAIVLDHNDIVNQMDKPEFYEAIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|307069530|ref|YP_003878007.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] gi|306482790|gb|ADM89661.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] Length = 214 Score = 108 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 3/158 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ + +R+K+G R +IP +IYGN + ++ K KN + Sbjct: 1 MKIHSFIRNKLGTYYNNKNRYKNRIPGVIYGNNKKNINLIFKKSELFKIFKKKNINILKI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++ + K+ Q ++H D L++S V + +P++F N S +K + Sbjct: 61 IFKK--KIKKFLIKNIQFHAYKKEILHIDLLRISNKKKVNILIPLKFKNIKNSYAVKSEN 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 +N + ++ + C IP I ++L +LK+ + I + Sbjct: 119 AFINFIYKKIPIFCLPKYIPKYILLNLKNLKVNNPILV 156 >gi|227112089|ref|ZP_03825745.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227325904|ref|ZP_03829928.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 94 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + + F + Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVKVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|237808487|ref|YP_002892927.1| 50S ribosomal protein L25 [Tolumonas auensis DSM 9187] gi|259646697|sp|C4LFH4|RL25_TOLAT RecName: Full=50S ribosomal protein L25 gi|237500748|gb|ACQ93341.1| ribosomal protein L25 [Tolumonas auensis DSM 9187] Length = 95 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 44/94 (46%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +R +GKG++R LR+ Q+PAI+YG + + L + F + + Sbjct: 2 SFTFQTEVRADLGKGASRRLRRAEQVPAILYGAGQEAVSLVLDHNKVITAQQEAAFYSEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL + + V V Q PV ++H DF++ Sbjct: 62 LTLVVDGKEVKVKVAAVQRHPVKPKVVHLDFIRA 95 >gi|68053088|sp|Q659V3|RL25_PASPI RecName: Full=50S ribosomal protein L25 gi|52137558|emb|CAH33824.1| L25 protein [Photobacterium damselae subsp. piscicida] Length = 92 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F ++ Sbjct: 1 MKFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEVPVAIVLDHDSVINQMDKPAFY-EVI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V P+D Q P + H DF +V Sbjct: 60 TLVIDGKEVQVKPQDIQRHPYKPKVNHMDFKRV 92 >gi|157371491|ref|YP_001479480.1| 50S ribosomal protein L25 [Serratia proteamaculans 568] gi|166987894|sp|A8GGW2|RL25_SERP5 RecName: Full=50S ribosomal protein L25 gi|157323255|gb|ABV42352.1| ribosomal protein L25 [Serratia proteamaculans 568] Length = 94 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R GKG++R LR + PAI+YG P I L + F + + Sbjct: 2 FTINVEVRKDQGKGASRRLRIANKFPAIVYGGEEAPVSIELDHDSVKNMESKPEFYSEAV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P L H DF +V Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFRRV 94 >gi|260778863|ref|ZP_05887755.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] gi|260605027|gb|EEX31322.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] Length = 92 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PAI+YG + P I L+ D+ ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIVLNHDDVVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|262394558|ref|YP_003286412.1| 50S ribosomal protein L25p [Vibrio sp. Ex25] gi|262338152|gb|ACY51947.1| LSU ribosomal protein L25p [Vibrio sp. Ex25] Length = 92 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F ++ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGLV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 61 -LVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|89073632|ref|ZP_01160154.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] gi|89050659|gb|EAR56145.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] Length = 92 Score = 107 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR Q P IIYG + P IAL D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLAEQFPGIIYGGEAAPVAIALKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|328473060|gb|EGF43908.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus 10329] Length = 92 Score = 107 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIILNHDDIVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 61 -LVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|28897984|ref|NP_797589.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91229004|ref|ZP_01262870.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|153840101|ref|ZP_01992768.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|260364231|ref|ZP_05776934.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] gi|260877139|ref|ZP_05889494.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|260895799|ref|ZP_05904295.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|260902064|ref|ZP_05910459.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|269968142|ref|ZP_06182177.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|68053212|sp|Q87QD9|RL25_VIBPA RecName: Full=50S ribosomal protein L25 gi|28806198|dbj|BAC59473.1| ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91187468|gb|EAS73806.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|149746297|gb|EDM57367.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|269827273|gb|EEZ81572.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|308088343|gb|EFO38038.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|308093641|gb|EFO43336.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|308109083|gb|EFO46623.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|308111903|gb|EFO49443.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] Length = 92 Score = 107 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 61 -LVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|326792991|ref|YP_004310812.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] gi|326543755|gb|ADZ85614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] Length = 181 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTILT 66 ++ R + K A+ LR+NG IP++IYG + + + K L K + + Sbjct: 4 ITVEKRSVLTK--AKQLRRNGIIPSVIYGGSLPESLLVQIDKNAAKKLLRCKR-EGSKME 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ +L+ V KD + V++ ++H F + V + N +K G+ Sbjct: 61 IELDSKLIPVQIKDIDSNIVNNEILHISFQALEADKRVNSKAQIILENTDKVVGV----- 115 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATI 184 L + EV +++ D++ VDL L +G + +EDI + E + I I Sbjct: 116 LEQLLFEVPYSALPSDMIDTVVVDLEGLAVGKVLTLEDIPVFKNENIDLQVSADSMILKI 175 Query: 185 V 185 Sbjct: 176 T 176 >gi|90578772|ref|ZP_01234582.1| 50S ribosomal protein L25 [Vibrio angustum S14] gi|90439605|gb|EAS64786.1| 50S ribosomal protein L25 [Vibrio angustum S14] Length = 92 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR Q P I+YG + P IAL D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLQEQFPGIVYGGEAAPVAIALKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|123441746|ref|YP_001005730.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162314|ref|YP_004298891.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223732|sp|A1JLN0|RL25_YERE8 RecName: Full=50S ribosomal protein L25 gi|122088707|emb|CAL11512.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606385|emb|CBY27883.1| LSU ribosomal protein L25p [Yersinia enterocolitica subsp. palearctica Y11] gi|325666544|gb|ADZ43188.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860252|emb|CBX70569.1| 50S ribosomal protein L25 [Yersinia enterocolitica W22703] Length = 95 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTI 64 + A +R+ GKG++R LR + PAIIYG I L F T Sbjct: 2 ITIKAEVRNDQGKGASRRLRAANKFPAIIYGGSEAAIAIELDHDTTKNLELKPGFYDNTG 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I + V + Q L H DF+++ Sbjct: 62 LTLVINGKETKVKVQAVQRHAFKPKLTHIDFVRI 95 >gi|86148084|ref|ZP_01066385.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218709848|ref|YP_002417469.1| 50S ribosomal protein L25 [Vibrio splendidus LGP32] gi|254801067|sp|B7VPU4|RL25_VIBSL RecName: Full=50S ribosomal protein L25 gi|85834144|gb|EAQ52301.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218322867|emb|CAV19044.1| ribosomal protein L25 [Vibrio splendidus LGP32] Length = 92 Score = 106 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L D+ ++ F TI Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVAIELVHADVINQMDKPEFYETI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|289804879|ref|ZP_06535508.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 87 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 40/87 (45%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R + GKG++R LR + PAIIYG P I L + F + +LTL + Sbjct: 1 VRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDG 60 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQV 98 + V V + Q L H DF++ Sbjct: 61 KEVKVKAQAVQRHAYKPKLTHIDFVRA 87 >gi|323494532|ref|ZP_08099637.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323496670|ref|ZP_08101721.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] gi|323311259|gb|EGA64418.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323318252|gb|EGA71212.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] Length = 92 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|254507008|ref|ZP_05119146.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] gi|219550003|gb|EED26990.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] Length = 92 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|311113110|ref|YP_003984332.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] gi|310944604|gb|ADP40898.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] Length = 98 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 3/98 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E K++A R GKG AR +R G IPA+IYGN +PK + L + + +K+ Sbjct: 4 TMSEIKITAEPRTDFGKGYARRIRAVGDIPAVIYGNGKEPKHVILPGHATTMAVRNKD-- 61 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 +L +++ E +D Q P+ L H D L V Sbjct: 62 -VVLVIEVDGEQFKTRVQDIQRHPIRPELQHIDLLFVD 98 >gi|156974943|ref|YP_001445850.1| 50S ribosomal protein L25 [Vibrio harveyi ATCC BAA-1116] gi|166223731|sp|A7MZG9|RL25_VIBHB RecName: Full=50S ribosomal protein L25 gi|156526537|gb|ABU71623.1| hypothetical protein VIBHAR_02662 [Vibrio harveyi ATCC BAA-1116] Length = 92 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|269963438|ref|ZP_06177765.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] gi|269831838|gb|EEZ85970.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] Length = 92 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG + I L+ DI ++ F I+ Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAAVAIVLNHDDIVNQMDKPEFYEGIV 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 61 -LVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|160937289|ref|ZP_02084651.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] gi|158439853|gb|EDP17602.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] Length = 188 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 11/182 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTIL 65 + R+ K A+ LR+ G IPA ++G DP I L D + L+ K + ++ Sbjct: 3 TICVQRREGAIK--AKKLRRLGFIPANVFGKSLPDPISIQLKESDARRLLHQKREGSKLM 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V K+ ++D + + H F ++ V + + +N++K PG Sbjct: 61 -LDLEGTGLPVQIKEKEIDTIKGQIQHISFQALTADEKVNSVIHILLVNDDKIPG----- 114 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNITIAT 183 +L+ + E+ ++ D+ITVDL+ + +G + ++DI + +K + Sbjct: 115 QLDKMLMEIPYASLPGDMIDTITVDLDGITVGTILTVKDIPELMSDKIELKVDSEEIVLR 174 Query: 184 IV 185 + Sbjct: 175 VS 176 >gi|293395239|ref|ZP_06639524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] gi|291422196|gb|EFE95440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] Length = 94 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG I L + F + Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAIAIELDHDSVKNMEAKPEFYAEAI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + V + Q L H DF++ Sbjct: 62 VLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRA 94 >gi|84394035|ref|ZP_00992773.1| ribosomal protein L25 [Vibrio splendidus 12B01] gi|84375372|gb|EAP92281.1| ribosomal protein L25 [Vibrio splendidus 12B01] Length = 92 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L ++ ++ F I Sbjct: 1 MKFEAVVRTELGKGASRRLRHTGKFPAVIYGGEAAAVAIELVHAEVINQMDKPEFYEAI- 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLLIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|271500913|ref|YP_003333938.1| 50S ribosomal protein L25-like protein [Dickeya dadantii Ech586] gi|270344468|gb|ACZ77233.1| Ribosomal protein L25-like protein [Dickeya dadantii Ech586] Length = 95 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNFMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDH-DIVKNLEDRNSEGLYG 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + + Q P L H DF++V Sbjct: 61 EIVLVIDGKETKAKIQAVQRHPFKPKLTHIDFVRV 95 >gi|322832031|ref|YP_004212058.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] gi|321167232|gb|ADW72931.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] Length = 96 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 6 CKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ +R D+ GKG++R LR + PAI+YG + P I L + F + Sbjct: 2 ITINVEVRPQDEQGKGASRRLRTANKFPAIVYGGSAAPVSIKLDHDSVKNLEVKAEFYSE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +TL I + V + Q P L H DF++V Sbjct: 62 AITLVIDGKETKVKVQAVQRHPFKPKLAHIDFVRV 96 >gi|85059550|ref|YP_455252.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] gi|109893397|sp|Q2NSM8|RL25_SODGM RecName: Full=50S ribosomal protein L25 gi|84780070|dbj|BAE74847.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] Length = 94 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 42/93 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV+R GKG++R LR + PAI+YG P I L + + F T +L Sbjct: 2 LTINAVIRKDQGKGASRRLRLANKFPAIVYGGTKAPVAIELDHDIVLNTQTKEGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V + Q L H DF++ Sbjct: 62 ALVIDGKESKVKVQAVQRHSFKPKLTHIDFVRA 94 >gi|307130683|ref|YP_003882699.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] gi|306528212|gb|ADM98142.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] Length = 95 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNFMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDH-DIVKNLEDRNSEGLYG 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L + + V + Q P L H DF++V Sbjct: 61 EIALVVDGKETKVKIQAVQRHPFKPKLTHIDFVRV 95 >gi|255327297|ref|ZP_05368371.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] gi|255295577|gb|EET74920.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] Length = 94 Score = 103 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E K+ A R GKG AR R G+IPA+IYGN ++PK + L + + + + + Sbjct: 3 EIKIVAEPRVDFGKGYARRARVAGKIPAVIYGNGAEPKHVTLPGHETTLAVRQAD---AV 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L +++ E + +D Q P+ L H D + V Sbjct: 60 LAIEVEGETIKARVQDIQRHPIRPELQHIDLVFV 93 >gi|46913156|emb|CAG19945.1| putative ribosomal protein L25 [Photobacterium profundum SS9] Length = 109 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 18 MKFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 77 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF +V Sbjct: 78 -LVIDGQEVAVKPQDIQRHVFKPKVEHMDFKRV 109 >gi|227494886|ref|ZP_03925202.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831338|gb|EEH63721.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 97 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R GKG AR R G++PA++YG P + L ++ + + T L Sbjct: 5 IRLEATVRTDFGKGFARRSRMAGKVPAVVYGPNLAPVHVELPGHEVFMIVKNNRQAT--L 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ + + KD Q PV ++H D + V Sbjct: 63 SIAFDGKEQLAVIKDVQRHPVRRDILHVDLVAV 95 >gi|256372367|ref|YP_003110191.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] gi|256008951|gb|ACU54518.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] Length = 172 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 13/158 (8%) Query: 28 GQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPV 86 G++P I+YG ++P + L L + +L ++I E+ V + PV Sbjct: 24 GKVPGIVYGAGLTEPVAVTLDRHGFLTALGQHAVVGQLLDIEIDGEVRTVKLQAVVRHPV 83 Query: 87 SDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDS 146 L H DFL V TV V VP+ G + +V V++ ++P S Sbjct: 84 RRELSHLDFLAVGASETVEVQVPLE-----------AGEGVRLVVGLVAVSGTPTSVPSS 132 Query: 147 ITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I V DL S+ + LP S + +AT+ Sbjct: 133 IHVG-ADLLADGSVTAGALPLPAGVSLVEAPETVVATV 169 >gi|242239779|ref|YP_002987960.1| ribosomal protein L25 [Dickeya dadantii Ech703] gi|242131836|gb|ACS86138.1| ribosomal protein L25 [Dickeya dadantii Ech703] Length = 95 Score = 101 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF--MTT 63 ++A +R++ GK ++R LR G+ PAI+YG P I L DI K L +N + Sbjct: 2 ITINAEVRNEQGKSASRRLRNTGKFPAIVYGGNEAPVSIVLDH-DIVKNLEDRNSAELFG 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V + Q L H DF++V Sbjct: 61 EIELVIDGKATKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|90410519|ref|ZP_01218535.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] gi|90328760|gb|EAS45044.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] Length = 92 Score = 101 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A++R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 1 MKFDAIVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF +V Sbjct: 61 -LVIDGQEVAVKPQDIQRHAFKPKVEHMDFKRV 92 >gi|238897689|ref|YP_002923368.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465446|gb|ACQ67220.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 99 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%) Query: 6 CKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++A +R ++ G ++R RK G PA +YG P I L + + F Sbjct: 2 IVINAKLRQKEEKGTAASRRFRKAGLFPATVYGGSLPPVSIVLDHDVVKNLEANPAFYNE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSE 100 ILTL++G+E V + Q P L H DF++ +E Sbjct: 62 ILTLEVGEEKTKVKIQAIQRHPFKPKLTHMDFIRANE 98 >gi|161936313|ref|YP_129747.2| 50S ribosomal protein L25 [Photobacterium profundum SS9] gi|68053167|sp|Q6LRY1|RL25_PHOPR RecName: Full=50S ribosomal protein L25 Length = 92 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 1 MKFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF +V Sbjct: 61 -LVIDGQEVAVKPQDIQRHVFKPKVEHMDFKRV 92 >gi|251790040|ref|YP_003004761.1| 50S ribosomal protein L25 [Dickeya zeae Ech1591] gi|247538661|gb|ACT07282.1| ribosomal protein L25 [Dickeya zeae Ech1591] Length = 95 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNFMTT 63 ++A +R + GKG++R LR G+ PAI+YG P I L DI K L + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDH-DIVKNLEDRNSEGLYG 60 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V + Q L H DF++V Sbjct: 61 EIVLVIDGKETKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|68074885|ref|XP_679359.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500086|emb|CAH94997.1| conserved hypothetical protein [Plasmodium berghei] Length = 284 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 16/187 (8%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN----- 59 L A ++ K + L + G IPAII+ + + I ++ K+I + + + Sbjct: 53 TVNLEARRWERFKK---KDLLQXGYIPAIIWKYGEEKR-ICINHKEIDEYAFEEEDGHLS 108 Query: 60 --FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 F + + IG E+V + + DPV + F +V+E V++P + Sbjct: 109 LLFSARLFKIHIGDEVVECVVSHVETDPVEKHIYFLKFARVAENEITQVNIPCSIVGLIG 168 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTS 172 SP G + + + + NNIP +D++ L + +SI + ++ LPE + Sbjct: 169 SPAYINGYHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLRELMHLLPENGN 228 Query: 173 SMSQLNI 179 + Sbjct: 229 VIFSEEY 235 >gi|219112565|ref|XP_002178034.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410919|gb|EEC50848.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 278 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 26/182 (14%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSD--------------PKPIALSAKDISKRLYSKN 59 + G + R LR IP I G+ + P A+ +++ + Y ++ Sbjct: 63 TEEGSRACRRLRWKNMIPGTIRGSDPNLGIFSKQPESEIYVKTPWAVLQRELDR--YHRD 120 Query: 60 FMTTILTL-------DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRF 112 F + + + D V+P++ Q PV+ + A+F + G + PV F Sbjct: 121 FESRVYDITVLDGPEDTEGTTHRVLPQNLQRHPVNSTIYCANFCRYHPGRPIKF--PVSF 178 Query: 113 INENKSPGIKQGGKLNVVCHEVSLLC-PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 IN +SP +K+ G + + + +IP+S+ ++ + L+ D I + I LP+ Sbjct: 179 INTEESPALKRDGFIIPIQRSIECFVEDGVDIPESLDMECSGLQFKDVIRTDRIILPDGV 238 Query: 172 SS 173 Sbjct: 239 RF 240 >gi|325261090|ref|ZP_08127828.1| ribosomal protein L25, Ctc-form [Clostridium sp. D5] gi|324032544|gb|EGB93821.1| ribosomal protein L25, Ctc-form [Clostridium sp. D5] Length = 197 Score = 100 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 14/184 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ K A+ LR+ G +++G M D + K+ + + N Sbjct: 2 TTLKAEKRNPEIK--AKRLRREGFTTGVLFGTGMKDTVALQYQEKEALSFIKA-NREGAQ 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL++ + + I K+ + + + DF + G ++ V +R +NE+ Sbjct: 59 VTLELDGKKISAITKNIDYNSMKKQINALDFQVLVAGEKISTAVQIRLMNESI-----VN 113 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDL--KIGDSIHMEDIRLPE--KTSSMSQLNIT 180 G +N EV N+ D I +D + +I + +++D++L E ++ + Sbjct: 114 GFVNQELTEVHYKADPANLLDPIEIDFEKISPEI-RNYYVKDLKLDEKKDIELITPEDAQ 172 Query: 181 IATI 184 I I Sbjct: 173 IFHI 176 >gi|308176602|ref|YP_003916008.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] gi|307744065|emb|CBT75037.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] Length = 94 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L AV+R GKG+AR R++GQIPA++YG S+P+ + L A++ + + + Sbjct: 3 SVNLDAVVRSDFGKGAARQARRDGQIPAVVYGAGSEPQHVLLPARETTLAVRDRGVE--- 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 L L+I + V KD Q+ ++ + H D + Sbjct: 60 LVLNIEGKTVKTTIKDIQIHALNRTVDHMDLI 91 >gi|323144481|ref|ZP_08079083.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] gi|322415759|gb|EFY06491.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] Length = 95 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 48/93 (51%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L AV+R +G+G++R LR+ +IPAII + I L K + F + + Sbjct: 3 ITLDAVVRTDLGRGASRRLRREARIPAIIVAPGQETVSITLDEKKLIVAALKDEFYSETV 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+++ + V P Q PV+ +IH DF++V Sbjct: 63 TINLDGSAIAVKPVAMQRHPVTSRIIHVDFMRV 95 >gi|83315860|ref|XP_730975.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490868|gb|EAA22540.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 285 Score = 98.9 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN------ 59 L A ++ K L+ +G IPAII YG D K I ++ K+I + + + Sbjct: 56 LEARRWERFKKKDL--LQAHGYIPAIIWKYG---DEKRICINHKEIDEYAFEEEDGHLSL 110 Query: 60 -FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + + IG E+V + + DPV + F +V E V+VP + S Sbjct: 111 LFSARLFKIHIGDEVVECVVSHVEADPVEKHIYFLKFARVVENEITQVNVPCSIVGLIGS 170 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSS 173 P G + + + + NNIP +D++ L + +SI + ++ LPE + Sbjct: 171 PAYINGYHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLRELMYLLPENGNV 230 Query: 174 MSQLNI 179 + Sbjct: 231 IFSEEY 236 >gi|304413081|ref|ZP_07394554.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] gi|304283924|gb|EFL92317.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] Length = 99 Score = 98.9 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 6 CKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++A +RD KG++R LR + PA++YG I L I+ F Sbjct: 2 ITINATVRDVKDQVKGASRRLRAKNKFPAVVYGGTEQAISIVLEQDVITNLESKPGFYGE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I + +V + Q P H DF++V Sbjct: 62 PLTLMIDDKANNVKVQAVQRHPFKPKFTHIDFMRV 96 >gi|213162257|ref|ZP_03347967.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 81 Score = 98.5 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVI 77 KG++R LR + PAIIYG P I L + F + +LTL + + V V Sbjct: 1 KGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDGKEVKVK 60 Query: 78 PKDYQLDPVSDILIHADFLQV 98 + Q L H DF++ Sbjct: 61 AQAVQRHAYKPKLTHIDFVRA 81 >gi|94676575|ref|YP_588833.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219725|gb|ABF13884.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 94 Score = 98.1 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K G ++ LR G++PAI+YG + P I L + + +L Sbjct: 2 LTLQAENRKKTGTRASNRLRIAGKLPAILYGGNTQPIAIELDSTKYMHIKNQISLDNDLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I ++ V Q P + H DF++V Sbjct: 62 ALVINGKIFTVKVWAIQHHPFKPQITHIDFIRV 94 >gi|302844117|ref|XP_002953599.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] gi|300261008|gb|EFJ45223.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] Length = 299 Score = 97.0 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 23/178 (12%) Query: 8 LSAVMRD---KVGKGSARLLRKNGQIPAIIY---------GNMSDPKPIALSAKDISKRL 55 L A +RD + + + + LR++G++P ++ G + +++ Sbjct: 114 LEAHVRDPEHGMARCAVKWLRRSGRVPGQVHSLMGSPGPGGRGVWELNVHFDETSLARMC 173 Query: 56 YSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 +F T+ +L + + +L+ + I D V V VPVR +N+ Sbjct: 174 ---HFPRTVPSLRGHGSDI-ANTQHPRLEGIEMIYCPVD-------RVVLVDVPVRLVND 222 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 +PG+++GG + ++ V N IP I V++ L + + + D+ +P T Sbjct: 223 EMAPGVRKGGWMCMLKRTVRYKALGNAIPPYIEVNVRHLDLEQDLLVRDLPIPPGTKI 280 >gi|223949451|gb|ACN28809.1| unknown [Zea mays] Length = 148 Score = 95.8 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 V+P D S +++ ++ EG+ + V +PV F ++ PG+K+GG L + + Sbjct: 31 TVLPIKVHRDENSGNILNLVMVKADEGTMLKVDLPVEFKGKDACPGLKKGGFLQKIRTSL 90 Query: 135 SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI-TIATIVA 186 LCPA +IP I VDL +L +GD + M DI + +S+ + I+A Sbjct: 91 VYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHPSLKLLSKNETMPVCKILA 143 >gi|255017155|ref|ZP_05289281.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL F2-515] Length = 93 Score = 94.3 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + + ++V+ +YQ+DP+ D+L+H D L Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLA 93 >gi|70943513|ref|XP_741793.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520399|emb|CAH75563.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 225 Score = 94.3 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 13/168 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------F 60 L A ++ K L+ +G IPAII+ + + I ++ K+I + + + F Sbjct: 56 LEARCWERFKKKEL--LQAHGYIPAIIWKYGEEKR-ICINHKEIDEYAFEEEDGHLSLLF 112 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + IG E+V + + DPV + F +V E V++P + SP Sbjct: 113 SARLFKIHIGDEVVECVVSHVEADPVEKHIYFLKFARVVENEITQVNIPCSIVGLIGSPA 172 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDI 165 G + + + + NNIP +D++ L + +SI + ++ Sbjct: 173 YINGYHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLREL 220 >gi|223944153|gb|ACN26160.1| unknown [Zea mays] Length = 192 Score = 93.9 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 17/134 (12%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKR---LYSKN 59 + AV R G+ A RK G++PAI++ + + I++ A I K L Sbjct: 58 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSF 117 Query: 60 FMTTILTLDIGKE---------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 118 FLSRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 177 Query: 111 RFINENKSPGIKQG 124 FI E+ SPG+++G Sbjct: 178 MFIGEDASPGLRKG 191 >gi|325262957|ref|ZP_08129693.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] gi|324032051|gb|EGB93330.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] Length = 192 Score = 93.1 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFMTTILT 66 ++ RD K A+ LR++G +P ++G P I+L + I++RL + L Sbjct: 5 ITVNKRDFTVK--AKQLRRSGIVPGSVFGGSL-PDSISLQMDEGIARRLIRYKREGSKLK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ ++L+ V K+ ++ +++ ++H F + V + + N K +G Sbjct: 62 LDLDRQLIPVQIKEKTINTLNNEILHISFQALKADLKVNSVIHIILKNTEKITESLEGML 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNITIATI 184 L E+ ++ D+IT+D++ + +G I + DI + EK + + I Sbjct: 122 L-----EIPYAAFPEDMIDTITIDVDGMAVGTVITVADIPELMSEKIDLQVEKEEIVLRI 176 Query: 185 V 185 Sbjct: 177 S 177 >gi|21672421|ref|NP_660488.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009079|sp|Q8KA03|RL25_BUCAP RecName: Full=50S ribosomal protein L25 gi|21623031|gb|AAM67699.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 96 Score = 93.1 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +RDK GK +R LR + P ++YG + P I + + ++F L L Sbjct: 4 VKAEIRDKKGKSFSRKLRIEDKFPGVLYGFNNTPISITMDHNLVFNLQKKEDFYKETLCL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFL 96 I ++ V Q ++H DF+ Sbjct: 64 LIKEKKYTVKVHAIQRHAFKMKILHIDFI 92 >gi|153831149|ref|ZP_01983816.1| ribosomal L25p family [Vibrio cholerae 623-39] gi|148873375|gb|EDL71510.1| ribosomal L25p family [Vibrio cholerae 623-39] Length = 77 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR G PAI+YG + P I+L+ D+ ++ F I+ L I + V V P+D Sbjct: 1 SRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEAIV-LVIDGQEVKVKPQD 59 Query: 81 YQLDPVSDILIHADFLQV 98 Q + H DF+++ Sbjct: 60 VQRHAYKPKVEHMDFIRI 77 >gi|124505281|ref|XP_001351382.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] gi|23498189|emb|CAD49160.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] Length = 286 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 15/189 (7%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN--- 59 + + A +K K ++ NG IPAII+ + + I + K I + + + Sbjct: 52 NTDVDIEAKCWEKFKKKEL--IQANGYIPAIIWKYGIEER-ICIPHKLIDEYAFEEEDGH 108 Query: 60 ----FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 F + + I ++V+ + + DP+ + F +V E ++VP I Sbjct: 109 LSLLFSARLFRVHIHGKVVNCVVSHVEADPIEKHIYFLKFARVVENQITEINVPCSIIGL 168 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDI--RLPEK 170 P G + + + + +NIP +D++ L + +SI ++D+ LP+ Sbjct: 169 IGCPAYINGYHVQLAMNSIKCKVLGSNIPGPFQIDVSKLTYKEPYNSIKLKDLLYLLPDD 228 Query: 171 TSSMSQLNI 179 + + Sbjct: 229 GNVIFSEEY 237 >gi|15616758|ref|NP_239970.1| 50S ribosomal protein L25 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681513|ref|YP_002467898.1| 50S ribosomal protein L25 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682069|ref|YP_002468453.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471194|ref|ZP_05635193.1| 50S ribosomal protein L25 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387018|sp|P57238|RL25_BUCAI RecName: Full=50S ribosomal protein L25 gi|254801038|sp|B8D8T9|RL25_BUCA5 RecName: Full=50S ribosomal protein L25 gi|254801039|sp|B8D743|RL25_BUCAT RecName: Full=50S ribosomal protein L25 gi|25295455|pir||H84945 50S ribosomal protein L25 [imported] - Buchnera sp. (strain APS) gi|10038821|dbj|BAB12856.1| 50S ribosomal protein L25 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621802|gb|ACL29958.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624356|gb|ACL30511.1| 50S ribosomal protein L25 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085881|gb|ADP65963.1| 50S ribosomal protein L25 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086452|gb|ADP66533.1| 50S ribosomal protein L25 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087034|gb|ADP67114.1| 50S ribosomal protein L25 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087598|gb|ADP67677.1| 50S ribosomal protein L25 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 95 Score = 90.8 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 35/93 (37%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + G G +R LR + + PA++YG + L F L Sbjct: 2 LTLQAETRKEKGTGFSRRLRIHNKFPAVLYGVKKTEILLILDHNTTFNLQKKIEFYKENL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + V + Q L+H DFL V Sbjct: 62 LLCVQDKKYKVKVQAIQRHSFKSKLLHIDFLYV 94 >gi|159487761|ref|XP_001701891.1| predicted protein [Chlamydomonas reinhardtii] gi|158281110|gb|EDP06866.1| predicted protein [Chlamydomonas reinhardtii] Length = 373 Score = 90.4 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 65/229 (28%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYG-------------NMSD---------------P 41 R G + + LR+ G++P ++ + D Sbjct: 126 VRPRSATGGTACKWLRRAGRVPGRVHSLPGADARAGAAAGHSEDQGASSSSSNINNNNNK 185 Query: 42 KPIALSAKDISKRLYS--KNFMTT-ILTLDI----------GKEL--------------- 73 + S D++K + + +N T +L L++ G E Sbjct: 186 LLVHFSEGDVAKLIRTFGRNGCTARVLQLNLVAPDAAASDSGAEQAAQADAGRSGEGTSG 245 Query: 74 ---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + V P ++ V+ + D + V V VPVR +N++ +PG+K+G Sbjct: 246 STSGTQLGMLRVKPTRVFVNAVTQRVEGLDLIYCPPERQVLVDVPVRLLNDDLAPGVKKG 305 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 G + + V IP I V++ ++ + + + D+ +P T Sbjct: 306 GWIALFKRTVRYKALGGAIPPYIEVNVRNMDLDQDMLVRDMPIPPGTKL 354 >gi|229823129|ref|ZP_04449198.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] gi|229787295|gb|EEP23409.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] Length = 101 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Query: 1 MDQK----ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY 56 M K L A +R+KVG GSA+ +R+ G +PA +YG S+ + ++ +++ L Sbjct: 1 MQAKGVLNTMSLKAELREKVGSGSAKKVREAGLVPATLYGKGSEAVSLTVNRRELDVVLK 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 ++ ++ L+ + +V+ K +SD + DF Sbjct: 61 TQ-GLSQAFELEFDGKKENVVVKAVNKAALSDEIYSVDF 98 >gi|221052608|ref|XP_002261027.1| Ribosomal L25-like protein [Plasmodium knowlesi strain H] gi|194247031|emb|CAQ38215.1| Ribosomal L25-like protein [Plasmodium knowlesi strain H] Length = 285 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 28 GQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-------FMTTILTLDIGKELVHVIP 78 G IPAII YG I + K I + + + F + + I +V + Sbjct: 74 GYIPAIIWKYGPEQR---ICIDHKLIDEYAFEEEDGHLSLLFSARLFRIHIDGNVVECVV 130 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 + DPV + F +V + +++P + P G + + + + Sbjct: 131 SHVETDPVEKHIYFLKFARVVKNQVTELNIPCSIVGLIGCPAYVNGYHVQLAMNYIKCKV 190 Query: 139 PANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSSMSQLNI 179 NNIP +D++ L + +SI + +++ LP+ + + Sbjct: 191 IGNNIPPPFQIDVSKLTYKEPYNSIRLGELKHLLPDDGNVVFSEEY 236 >gi|330887870|gb|EGH20531.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 71 Score = 90.0 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKE 72 + I+ L++G + Sbjct: 61 SHIIELNVGGQ 71 >gi|219847611|ref|YP_002462044.1| 50S ribosomal protein L25 [Chloroflexus aggregans DSM 9485] gi|219541870|gb|ACL23608.1| ribosomal protein L25 [Chloroflexus aggregans DSM 9485] Length = 94 Score = 88.1 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS-KN 59 M L+A R GK + LR+ G +PA YG + I ++ +D + + Sbjct: 1 MAN--VTLTAQRRHIFGKK-VKTLRREGILPANFYGKGVETTAIQVNERDFEQIFRTVPK 57 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + TL+I V+ Q PV+ +H DF Sbjct: 58 GES--FTLNIEGTTYPVVIYVVQRHPVTRKFLHVDF 91 >gi|87306413|ref|ZP_01088560.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] gi|87290592|gb|EAQ82479.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] Length = 90 Score = 87.7 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+ R+ GK + R LR G+IPA++YGN + + + A + + + K + + Sbjct: 5 LNVKKRELTGKLNNRRLRNAGKIPAVLYGNGQESVSLEVCADEFAAIVRHK-----VKNI 59 Query: 68 DIGKELV-HVIPKDYQLDPVSDILIHADFLQ 97 ++ ++ +V+ +D Q D + H DF + Sbjct: 60 ELAGDVTGNVVMRDIQWDTFGVDVQHIDFYR 90 >gi|156094635|ref|XP_001613354.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802228|gb|EDL43627.1| hypothetical protein, conserved [Plasmodium vivax] Length = 285 Score = 87.7 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 70/178 (39%), Gaps = 15/178 (8%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-------FMTTILT 66 +K K L+ +G IPAII+ ++ + I + + I + + + F + Sbjct: 62 EKFKKKEL--LQVHGYIPAIIWKYGAE-QRICIDHRLIDEYAFEEEDGHLSLLFSARLFR 118 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + + +V + + DPV + F +V +++P + P G Sbjct: 119 IHVDGNVVECVVSHVEADPVEKHIYFLKFARVVSNQVTELNIPCSIVGLIGCPAYVNGYH 178 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSSMSQLNI 179 + + + + NNIP +D++ L + +SI + ++ LPE + + Sbjct: 179 VQLAMNYIKCKVIGNNIPPPFQIDVSRLTYKEPYNSIKLGELAHLLPEDGNVVFSEEY 236 >gi|303241756|ref|ZP_07328253.1| Ribosomal protein L25-like protein [Acetivibrio cellulolyticus CD2] gi|302590757|gb|EFL60508.1| Ribosomal protein L25-like protein [Acetivibrio cellulolyticus CD2] Length = 102 Score = 87.3 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 1/103 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ R ++G AR L++ G +P ++Y + PI + +I L K Sbjct: 1 MEAFDINVENRTELGSSVARKLKREGMVPGVLY-QGGESLPIEMREDEIRHVLAGKMDYD 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 IL + K+ Q + +S + H D + + + Sbjct: 60 LILNISFNNRQFKAKVKEVQREAISGEIRHVDLMPLETNGYIH 102 >gi|116515029|ref|YP_802658.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256883|gb|ABJ90565.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 98 Score = 87.3 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNM--SDPKPIALSAKDISKRLYSKNFMT 62 KL A+ R+K+G ++R R + +IPAIIYG I L I KNF + Sbjct: 2 IKLQAIYRNKLGTNNSRYFRNFDKKIPAIIYGKKFLEKELFILLDHNIIFNLQKEKNFFS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 + + + I +D Q I++H DFL + Sbjct: 62 NNFLIKLKNKSFFSILQDIQFHVFKPIILHIDFLCIK 98 >gi|163849365|ref|YP_001637409.1| 50S ribosomal protein L25 [Chloroflexus aurantiacus J-10-fl] gi|222527362|ref|YP_002571833.1| 50S ribosomal protein L25 [Chloroflexus sp. Y-400-fl] gi|163670654|gb|ABY37020.1| ribosomal protein L25 [Chloroflexus aurantiacus J-10-fl] gi|222451241|gb|ACM55507.1| ribosomal protein L25 [Chloroflexus sp. Y-400-fl] Length = 94 Score = 87.3 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS-KN 59 M L+A R GK + LR+ G +PA YG + I ++ +D + + Sbjct: 1 MAN--VTLTAQRRHIFGKK-VKTLRREGILPANFYGKGVETTAIQINERDFEQIFRTVPK 57 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + LDI V+ Q PV+ +H DF Sbjct: 58 GES--FNLDIEGTTYPVVIYVVQRHPVTRKFLHIDF 91 >gi|213026467|ref|ZP_03340914.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 71 Score = 86.9 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVH 75 TL + + V Sbjct: 62 TLVVDGKEVK 71 >gi|237830665|ref|XP_002364630.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|211962294|gb|EEA97489.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|221507509|gb|EEE33113.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 313 Score = 86.6 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 15/180 (8%) Query: 18 KGSARL--LRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-----FMTTILTLD 68 K R +++ G +P I+ YG + I + F + L Sbjct: 91 KRFVRKEDIQRAGYVPCIVEKYG-IERRLAIHRDTLEALAFDEQHGHLSYLFQARLFRLR 149 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 IG + IP Q DPV+ L F + G V +P + P ++G + Sbjct: 150 IGNWIEECIPTFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACPAYQRGYHVE 209 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSMSQLNITIAT 183 +V + C IP VD++ L +I ++D++ LP S+ + AT Sbjct: 210 LVMPTIRCQCVGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPADGSARFHPSYDAAT 269 >gi|221487715|gb|EEE25947.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 313 Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 13/170 (7%) Query: 26 KNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-----FMTTILTLDIGKELVHVIP 78 + G +P I+ YG + I + F + L IG + IP Sbjct: 101 RAGYVPCIVEKYG-IERRLAIHRDTLEALAFDEQHGHLSYLFQARLFRLRIGNWIEECIP 159 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 Q DPV+ L F + G V +P + P ++G + +V + C Sbjct: 160 TFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACPAYQRGYHVELVMPTIRCQC 219 Query: 139 PANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSMSQLNITIAT 183 IP VD++ L +I ++D++ LP S+ + AT Sbjct: 220 VGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPADGSARFHPSYDAAT 269 >gi|27904632|ref|NP_777758.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38258552|sp|Q89AV5|RL25_BUCBP RecName: Full=50S ribosomal protein L25 gi|27904029|gb|AAO26863.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 97 Score = 85.0 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR-LYSKNFMTTI 64 + + R K GK ++R LR + PAII+ ++ I LS D + + +F + Sbjct: 2 LTIYGISRTKCGKKASRRLRLQNKFPAIIHVSLISNISIELSQNDFINIEMKNSDFYKSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 + L + K V ++ Q ++H DFL+VS Sbjct: 62 VILIVDKVKYIVKIQEIQRHAFKSKILHIDFLKVS 96 >gi|125973813|ref|YP_001037723.1| 50S ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|256004546|ref|ZP_05429525.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281417970|ref|ZP_06248990.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|125714038|gb|ABN52530.1| LSU ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|255991551|gb|EEU01654.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281409372|gb|EFB39630.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|316939993|gb|ADU74027.1| Ribosomal protein L25-like protein [Clostridium thermocellum DSM 1313] Length = 105 Score = 85.0 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L+ R +G ++R +++ G+IP ++Y PI+L +I + KN Sbjct: 1 MEEFELNIENRTALGTSASRKVKREGKIPGVLYQGDK-SIPISLIEDEIRPIVD-KNGSD 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 ++ +++ + + + Q PVSD ++H D + + G Sbjct: 59 VLVNVNLNGKRIKAKIHEVQRKPVSDEILHVDLMPLDGGKE 99 >gi|113476807|ref|YP_722868.1| 50S ribosomal protein L25 [Trichodesmium erythraeum IMS101] gi|110167855|gb|ABG52395.1| LSU ribosomal protein L25P [Trichodesmium erythraeum IMS101] Length = 102 Score = 83.9 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 11/101 (10%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTT 63 E + R K + LR+ G IPA++YG+ ++ + + K+ + L + + T Sbjct: 2 EVTVECQKRPLGSK--TKALRREGLIPAVLYGHQLTESVSLTIDIKEAQQLLKNASTNKT 59 Query: 64 ILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVS 99 ++ L + + + ++ Q P + H F +S Sbjct: 60 VIDLKVPEISWNGKT---LLREVQYHPYKSEIYHLSFFSIS 97 >gi|325119762|emb|CBZ55315.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 183 Score = 82.3 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + L IGK + IP Q DPV+ L F + EG V +P + P Sbjct: 11 FQARLFRLRIGKWIEECIPTFVQADPVARRLYFVKFERHVEGKISEVDIPTTMVGLLACP 70 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEKTSSM 174 ++G + +V + C +IP VD++ L +I ++D++ LP S+ Sbjct: 71 AYQRGYHVELVMPTIRCQCVGADIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPSDGSAR 130 Query: 175 SQLNITIAT 183 + +AT Sbjct: 131 FHPSYNVAT 139 >gi|218245577|ref|YP_002370948.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 8801] gi|218166055|gb|ACK64792.1| ribosomal protein L25 [Cyanothece sp. PCC 8801] Length = 108 Score = 81.9 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K +A LR+ G IPA +YG+ ++ + ++AK+ L T Sbjct: 2 SLTIECQQRPEGSKPNA--LRREGYIPANLYGHDGANSVALMVNAKEAVTLLKKAAANET 59 Query: 64 ILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 ++ ++I + + ++ Q P L+H F V +T Sbjct: 60 VIEVNIPHLSWTGNALIREIQAHPWKKNLLHLSFFYVGNTEGLT 103 >gi|257058622|ref|YP_003136510.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 8802] gi|256588788|gb|ACU99674.1| ribosomal protein L25 [Cyanothece sp. PCC 8802] Length = 108 Score = 81.6 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 5/103 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K +A LR+ G IPA +YG+ ++ + ++AK+ L T Sbjct: 2 SLTIECQKRPEGSKPNA--LRREGYIPANLYGHDGANSVALMVNAKEAVTLLKQAFANET 59 Query: 64 ILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 ++ ++I + + ++ Q P L+H F V ++ Sbjct: 60 VIEVNIPHLSWTGNALIREIQAHPWKKNLLHLSFFYVGNTESL 102 >gi|71892246|ref|YP_277980.1| 50S ribosomal protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109893345|sp|Q492J6|RL25_BLOPB RecName: Full=50S ribosomal protein L25 gi|71796352|gb|AAZ41103.1| 50S ribosomal subunit protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 97 Score = 79.6 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 9/99 (9%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISK-----RLYSKN 59 + A +R KG+ R LRK + PA+IY +P PI L+ DI +LY N Sbjct: 2 LTIKANLRIYHKKGATRRLRKQNKCPAVIYNRGQEPSIPIILNQNDILHPEAVIQLYKNN 61 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + + ++ + V ++ Q P LIH DF +V Sbjct: 62 VILLFIE---NQQPITVKVQELQYHPFKSKLIHIDFTRV 97 >gi|319760596|ref|YP_004124534.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] gi|318039310|gb|ADV33860.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] Length = 101 Score = 78.1 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY--GNMSDPKPIALSAKDISKRLYSKNFM-T 62 K++A +R + R LR + PAIIY + PI L+ KDI +F Sbjct: 2 FKINAELRIAIKTAGVRRLRNQEKCPAIIYYKNKKFENLPIILNNKDIQHPNSIIHFYKN 61 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFL 96 IL L+I K +V V K+ Q P +IH DF+ Sbjct: 62 NILKLNIQNKSIVQVQIKEIQYHPYRSKIIHIDFM 96 >gi|67922147|ref|ZP_00515662.1| Ribosomal protein L25 [Crocosphaera watsonii WH 8501] gi|67856047|gb|EAM51291.1| Ribosomal protein L25 [Crocosphaera watsonii WH 8501] Length = 103 Score = 77.7 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K +A LR+ G +PA +YG+ ++ +A++ K+++ L T Sbjct: 2 SLSIECQKRPENIKPNA--LRREGLVPATLYGHDGTESLQLAVNTKEVALMLRGVTVNET 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 ++ L+I + K+ Q P LIH F V + Sbjct: 60 VIDLNIPDLSWNGQAVIKEIQAHPWKRNLIHLSFCYVKPEGAIR 103 >gi|119512090|ref|ZP_01631183.1| 50S ribosomal protein L25 [Nodularia spumigena CCY9414] gi|119463248|gb|EAW44192.1| 50S ribosomal protein L25 [Nodularia spumigena CCY9414] Length = 99 Score = 77.3 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 11/102 (10%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ + R + K +A LR++G IPA +YG+ ++ + + AK I + L T Sbjct: 3 IQVESQKRPEGSKPNA--LRRSGLIPANLYGHKGAESISLVVDAKTIERLLKQAAVNKTE 60 Query: 65 LTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 + L+I + + ++ Q P + H F S Sbjct: 61 IELNIPELEWNGKT---VLREVQSHPAKGFIYHVSFFATSPD 99 >gi|119485328|ref|ZP_01619656.1| 50S ribosomal protein L25 [Lyngbya sp. PCC 8106] gi|119457084|gb|EAW38210.1| 50S ribosomal protein L25 [Lyngbya sp. PCC 8106] Length = 99 Score = 77.3 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 11/101 (10%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR+ G IPA++YG+ ++ + L K + + + T+ Sbjct: 3 LTIECQKRAEGTK--PKALRREGLIPAVLYGHQGTESIELTLDQKKAIQLMQTATVNKTV 60 Query: 65 LTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSE 100 + L I + + + Q P + H F V Sbjct: 61 IELSIPHLSWNGKT---VLHEVQAHPWKPLPYHFSFFAVKA 98 >gi|108709803|gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 182 Score = 76.9 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 17/135 (12%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKP---IALSAKDISKRLY- 56 + A+ R+ G +A R++G++PA++ G + K + + L Sbjct: 36 HTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQ 95 Query: 57 SKNFMTTILTLDIGKELV--------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHV 108 S F++T + L + V+P D + +++ ++ EG+ + V++ Sbjct: 96 SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNL 155 Query: 109 PVRFINENKSPGIKQ 123 PV F E+ PG+K+ Sbjct: 156 PVEFKGEDVCPGLKK 170 >gi|126658262|ref|ZP_01729412.1| 50S ribosomal protein L25 [Cyanothece sp. CCY0110] gi|126620411|gb|EAZ91130.1| 50S ribosomal protein L25 [Cyanothece sp. CCY0110] Length = 100 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + KG+A LR+ G IPA +YG+ ++ + + K+ + L T Sbjct: 2 SLSIECKKRPENVKGNA--LRREGLIPATLYGHNGTESMQLMVDQKETALMLRGVTVDET 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSE 100 ++ ++I + K+ Q P LIH F V Sbjct: 60 VIDVNIPDLSWNGQAVVKEIQAHPWKRNLIHLSFCYVKP 98 >gi|156089617|ref|XP_001612215.1| hypothetical protein [Babesia bovis T2Bo] gi|154799469|gb|EDO08647.1| conserved hypothetical protein [Babesia bovis] Length = 263 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 17/172 (9%) Query: 26 KNGQIPAII---------YGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHV 76 G +PA++ Y D +A S F + L IG ++ Sbjct: 50 AEGLVPALVTLHGYPSKVYIKRGDIFSLAFDE---EHGHLSHLFTGRLYNLKIGNDIERC 106 Query: 77 IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSL 136 + D + DP+ +L F + EG V +P + SP +G + ++ + Sbjct: 107 VITDVKCDPIEKVLYFVKFARHVEGEISEVDIPCSVVGLMASPAYLKGYHVQLMMPTIKC 166 Query: 137 LCPANNIPDSITVDLNDLKIGD---SIHMEDI--RLPEKTSSMSQLNITIAT 183 +P +D++ L + SI ++DI LP S + I T Sbjct: 167 EVAGKTVPPPFQIDVSKLDYREPYNSIVLKDILHLLPNDHSVFFHRSYDIET 218 >gi|33519924|ref|NP_878756.1| 50S ribosomal protein L25 [Candidatus Blochmannia floridanus] gi|71153130|sp|Q7VRX2|RL25_BLOFL RecName: Full=50S ribosomal protein L25 gi|33504270|emb|CAD83162.1| 50s ribosomal protein L25 [Candidatus Blochmannia floridanus] Length = 103 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFM-TTIL 65 + A++R ++ K R +RKNG PA+IY P + LS KD+S F+ + Sbjct: 4 IKAILRTEIKKSITRKIRKNGGCPAVIYNKNKSPNINVQLSNKDLSHPENVHYFLKNNKV 63 Query: 66 TLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQV 98 + I E + +D Q P +IH DF+ + Sbjct: 64 QILINNEFTITAKIQDVQYHPYKSNIIHIDFIHI 97 >gi|219685943|ref|ZP_03540741.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] gi|219672517|gb|EED29558.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] Length = 86 Score = 75.8 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Query: 99 SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 + +VP++ I S G+K+GG L V+ +V + ++P+ I +DL + GD Sbjct: 1 DRRVELEKYVPIKLIG--ASVGVKEGGILTVLKEQVRVKSLPLDLPEFIELDLTPVNKGD 58 Query: 159 SIHMEDIRLPEKTSSM-SQLNITIATI 184 S+ ++D+ LP + N+ + TI Sbjct: 59 SVFLKDLVLPSNVKLAENDENLEVVTI 85 >gi|172039135|ref|YP_001805636.1| 50S ribosomal protein L25 [Cyanothece sp. ATCC 51142] gi|171700589|gb|ACB53570.1| 50S ribosomal protein L25 [Cyanothece sp. ATCC 51142] Length = 100 Score = 75.8 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + KG+A LR+ G IPA +YG+ ++ + + K+ + L T Sbjct: 2 SLSIECKKRPENVKGNA--LRREGLIPATLYGHNGTESMQLMVDQKETALMLREVTVDET 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSE 100 ++ ++I + K+ Q P LIH F V Sbjct: 60 VIDVNIPDLSWNGKAVVKEIQAHPWKRNLIHLSFCYVKP 98 >gi|289608549|emb|CBI60572.1| unnamed protein product [Sordaria macrospora] Length = 88 Score = 75.4 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++++ + I KD Q DPV +++ H D L V +G V V VPV E+ +PG Sbjct: 7 NALFSIELEGKGQLAIAKDVQRDPVRNVIEHVDLLIVKKGEKVAVEVPVAVTGES-APGT 65 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSIT 148 V +++ A ++P+S+ Sbjct: 66 IH----LVDLQTLAIEAEATHLPESVE 88 >gi|17232277|ref|NP_488825.1| 50S ribosomal protein L25 [Nostoc sp. PCC 7120] gi|71153116|sp|Q8YMY9|RL25_ANASP RecName: Full=50S ribosomal protein L25 gi|17133922|dbj|BAB76484.1| alr4785 [Nostoc sp. PCC 7120] Length = 99 Score = 73.8 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 5/99 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR+ G IPA +YG+ + + + AK + + L + T Sbjct: 3 LTVETKKRPEGSK--PKALRRAGFIPANLYGHNGRESISLVVDAKVVERLLKAAAVKKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 + L+I + I ++ Q+ P H FL ++G Sbjct: 61 IELNIPELEWTGKTILQEVQIHPAKGTPYHISFLATAKG 99 >gi|282896707|ref|ZP_06304715.1| 50S ribosomal protein L25 [Raphidiopsis brookii D9] gi|281198425|gb|EFA73313.1| 50S ribosomal protein L25 [Raphidiopsis brookii D9] Length = 98 Score = 72.7 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ +AL AK + + L T Sbjct: 3 LTVESQKRPEGIK--PKALRRSGLIPANLYGHNGTESISLALEAKTVDRLLKQAAPNKTE 60 Query: 65 LTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVS 99 + L I + ++ Q+ P H F Sbjct: 61 IELSIPDLQWTGKTVLREVQVHPAKGTPYHLSFFAAK 97 >gi|84995870|ref|XP_952657.1| hypothetical protein [Theileria annulata strain Ankara] gi|65302818|emb|CAI74925.1| hypothetical protein, conserved [Theileria annulata] Length = 273 Score = 72.7 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%) Query: 23 LLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSK--NFMTTILTL----------- 67 L G +PA+I +G + I + + I K + + ++ + T Sbjct: 47 QLLSEGLVPALITDFGPLRK---ICIKSHLIHKLAFDEPYAHLSHLFTGRLYNLFVKNEG 103 Query: 68 ----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 G L I + DPV +L F + EG V++P SP + Sbjct: 104 QGQHSDGGVLEKCIISEVNSDPVEKVLYFIKFKRHVEGRITEVNIPCTITGLFASPAYLK 163 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDI--RLPEKTSSMSQLN 178 G + ++ + IP +D++ L+ SI++ DI LP S + + Sbjct: 164 GYHVELMMPTIKCEVVGKTIPPPFQIDVSSLEYNYPFSSIYLRDILHLLPSDESVLFHRD 223 Query: 179 I 179 Sbjct: 224 Y 224 >gi|75908275|ref|YP_322571.1| 50S ribosomal protein L25 [Anabaena variabilis ATCC 29413] gi|109893344|sp|Q3MBG0|RL25_ANAVT RecName: Full=50S ribosomal protein L25 gi|75702000|gb|ABA21676.1| LSU ribosomal protein L25P [Anabaena variabilis ATCC 29413] Length = 99 Score = 72.7 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR++G IPA +YG+ + + + AK + + L + T Sbjct: 3 LTVETKKRPEGSK--PKALRRSGFIPANLYGHNGRESISLVVDAKVVERLLKAAAVKKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 + L+I + + ++ Q+ P H FL ++G Sbjct: 61 IELNIPELEWTGKTVLQEVQIHPAKGTPYHISFLATAKG 99 >gi|282900118|ref|ZP_06308075.1| Ribosomal protein L25 [Cylindrospermopsis raciborskii CS-505] gi|281195000|gb|EFA69940.1| Ribosomal protein L25 [Cylindrospermopsis raciborskii CS-505] Length = 98 Score = 72.3 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ +A+ AK + + L T Sbjct: 3 LTVESQKRPEGIK--PKALRRSGLIPANLYGHNGTESISLAVEAKTVDRLLKQAAPNKTE 60 Query: 65 LTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVS 99 + L I + ++ Q+ P H F Sbjct: 61 IELSIPDLQWTGRTVLREVQVHPAKGTPYHLSFFAAK 97 >gi|167011125|ref|ZP_02276056.1| ribosomal L25p family protein [Francisella tularensis subsp. holarctica FSC200] Length = 57 Score = 71.2 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK 53 M L A R+ +G G++R LR+ G+IPA+IYG + + L + Sbjct: 1 MAN--FVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLH 51 >gi|16329909|ref|NP_440637.1| 50S ribosomal protein L25 [Synechocystis sp. PCC 6803] gi|1652395|dbj|BAA17317.1| sll1824 [Synechocystis sp. PCC 6803] Length = 185 Score = 71.2 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 11/96 (11%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 + R + K + R LR+ G IPA +YG+ ++ + + K L S T + Sbjct: 92 IECQQRPE--KVNPRALRREGLIPATLYGHNGAESISLVVDHKTAITMLRSVTVKETPIE 149 Query: 67 LDI-----GKELVHVIPKDYQLDPVSDILIHADFLQ 97 + I E + ++ Q P L H F Sbjct: 150 VKIPHLSWEGE---AVVQEIQCHPWRRNLYHLAFFA 182 >gi|295698302|ref|YP_003602957.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] gi|291157435|gb|ADD79880.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] Length = 98 Score = 70.8 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT-I 64 ++ A +R GK R ++K +IPAI++ + + I + KDI K + N + Sbjct: 2 IQIGAKIRTSTGKVYNRRIKKRKEIPAILHIKKNKNRLIRIQRKDILKLEKNVNPRNFFV 61 Query: 65 LTLDIGKE---LVHVIPKDYQLDPVSDILIHADFLQV 98 L + KE +V ++ Q P + +IH DF +V Sbjct: 62 LQIKFSKENLEERNVRIQEVQRHPYTGEIIHIDFFEV 98 >gi|298492077|ref|YP_003722254.1| Ribosomal protein L25-like protein ['Nostoc azollae' 0708] gi|298233995|gb|ADI65131.1| Ribosomal protein L25-like protein ['Nostoc azollae' 0708] Length = 98 Score = 70.4 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ + + AK + + L T Sbjct: 3 IAVESQKRPEGSK--PKALRRSGLIPANLYGHKGTESISLVVDAKVVERLLKQAAPNKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADFL 96 + L+I + + ++ Q+ P H F Sbjct: 61 IELNIPELEWSGKTVLREVQIHPAKGTPYHLSFF 94 >gi|282858158|ref|ZP_06267353.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] gi|282584080|gb|EFB89453.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] Length = 101 Score = 69.2 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPK-PIALSAKDISKRLYSKN 59 M + ++ R+ G LRK G +PA++YG + + + K + L S + Sbjct: 1 MS-EAVQIVLENREGSGSAYCGRLRKEGFLPAVVYGPALEQTYSVKVETKTMLPYLMSDD 59 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFL 96 T+ + E+ + + K + +D L+H DF Sbjct: 60 VKKTVFAAKLPNGEVKNCVIKSATKNYATDRLLHIDFY 97 >gi|284928842|ref|YP_003421364.1| 50S ribosomal protein L25 [cyanobacterium UCYN-A] gi|284809301|gb|ADB95006.1| ribosomal protein L25 (general stress protein Ctc) [cyanobacterium UCYN-A] Length = 134 Score = 69.2 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 5/98 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 + R K +A LR+ G +P +YG+ ++ + + K+ + L TI+ Sbjct: 39 IQCQKRPLNTKPNA--LRREGLLPTTLYGHNGTESMQLVVDKKEAALMLRDVKVNETIIN 96 Query: 67 LDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 +DI VI K+ Q P LIH F V Sbjct: 97 VDIPDLSWKGEVILKEIQAHPWKRSLIHLSFCYVLPNK 134 >gi|220907938|ref|YP_002483249.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 7425] gi|219864549|gb|ACL44888.1| ribosomal protein L25 [Cyanothece sp. PCC 7425] Length = 103 Score = 68.8 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 L +R + K +A LR++G IPA++YG+ ++ + + AK + T Sbjct: 2 LTLECQVRPQGSKPNA--LRRSGWIPAVLYGHNGTESLSLVVKAKTAELLVRDAKLNKTP 59 Query: 65 LTLDIGKELV--HVIPKDYQLDPVSD-ILIHADFLQVS 99 + + I V+ ++ Q P + H F+ Sbjct: 60 IQVQISDNTWSGQVVLQEVQAHPWKTLQIYHLSFMVAK 97 >gi|71153669|sp|P73289|RL25_SYNY3 RecName: Full=50S ribosomal protein L25 Length = 98 Score = 67.7 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 + R + K + R LR+ G IPA +YG+ ++ + + K L S T + Sbjct: 5 IECQQRPE--KVNPRALRREGLIPATLYGHNGAESISLVVDHKTAITMLRSVTVKETPIE 62 Query: 67 LDIG--KELVHVIPKDYQLDPVSDILIHADFLQ 97 + I + ++ Q P L H F Sbjct: 63 VKIPHLSWEGEAVVQEIQCHPWRRNLYHLAFFA 95 >gi|71029948|ref|XP_764616.1| hypothetical protein [Theileria parva strain Muguga] gi|68351572|gb|EAN32333.1| hypothetical protein, conserved [Theileria parva] Length = 276 Score = 66.5 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 32/185 (17%) Query: 23 LLRKNGQIPAIIYGNMSDPKP---IALSAKDISKRLYSKN-------FMTTILTL---DI 69 L G +PA+I +D P I + + I K + + F + L + Sbjct: 47 QLLSEGLVPALI----TDSGPLRKICIKSHLIQKLAFDEAYAHLSYLFTGRLYNLLVQND 102 Query: 70 GKELV----------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 GK+ + + DPV ++ F + EG V++P SP Sbjct: 103 GKDQHTEHSDDNVPEKCVISEVNSDPVEKVIYFIKFKRHIEGRITEVNIPCTITGLFASP 162 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD---SIHMEDI--RLPEKTSSM 174 +G + ++ + IP +D++ L SI+++DI LP S Sbjct: 163 AYLKGYHVELMMPTIKCEVVGKTIPPPFQIDVSSLDYTHPFSSIYLKDILHLLPSDDSVF 222 Query: 175 SQLNI 179 + Sbjct: 223 FHRDY 227 >gi|22298073|ref|NP_681320.1| 50S ribosomal protein L25 [Thermosynechococcus elongatus BP-1] gi|71153668|sp|Q8DLG3|RL25_THEEB RecName: Full=50S ribosomal protein L25 gi|22294251|dbj|BAC08082.1| 50S ribosomal protein L25 [Thermosynechococcus elongatus BP-1] Length = 101 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M + + +R K +A LR+NG+IPA++YG + + + + + Sbjct: 1 MS-RSLAIEGQLRPADAKPNA--LRRNGKIPAVLYGPTIESSISLVVDTRAAELLVRDAR 57 Query: 60 FMTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 T + L I V+ ++ Q P D L H FL +E Sbjct: 58 PQKTPIQLSIPDLPWQGTVVLQEVQAHPAKDTLYHLSFLAKAEN 101 >gi|170077505|ref|YP_001734143.1| 50S ribosomal protein L25 [Synechococcus sp. PCC 7002] gi|169885174|gb|ACA98887.1| Ribosomal protein L25 [Synechococcus sp. PCC 7002] Length = 97 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 22 RLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 R LR++G +P +YG+ +D ++ KD L T++ + + ++ Sbjct: 17 RALRRDGLLPVNLYGHKGADSDVFVVNYKDALTLLKKVTPNETVVEVKTPDWSGTAVVRE 76 Query: 81 YQLDPVSDILIHADFL 96 Q P L+H F Sbjct: 77 IQSHPWKRNLLHLSFF 92 >gi|222630912|gb|EEE63044.1| hypothetical protein OsJ_17852 [Oryza sativa Japonica Group] Length = 83 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 120 GIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G ++GG N + V LCPA+ +P I VDL++L +G + M D+++ + Sbjct: 6 GYREGGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLQSPE 65 Query: 179 ITIATIVAPIS 189 I +I+ + Sbjct: 66 QPICSIIGSRA 76 >gi|260655928|ref|ZP_05861397.1| ribosomal protein L25, Ctc-form [Jonquetella anthropi E3_33 E1] gi|260629544|gb|EEX47738.1| ribosomal protein L25, Ctc-form [Jonquetella anthropi E3_33 E1] Length = 99 Score = 61.9 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKN 59 M + K+ R++ GK LR+ G +P ++YG +P AK L + Sbjct: 1 MS-ENVKIILEARNETGKEVCGRLRRQGCLPVVVYGPGMKEPLLAKTDAKAAEAYLV-GD 58 Query: 60 FMTTILTLDIG-KELVHVIPKDYQLDPVSDILIHADFL 96 F + + + + K + +D L+H DF Sbjct: 59 FKSCQYDVTLPCGTVKTCSIKSAAKNHGTDQLLHIDFY 96 >gi|1169120|sp|P42832|CTC_BACCL RecName: Full=General stress protein ctc gi|633148|emb|CAA58683.1| ctc [Bacillus caldolyticus] Length = 59 Score = 60.8 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A R + + R +R G IPAI+YG + K I ++A ++ K L + Sbjct: 2 EIVLEAKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVTAAELEKVLREGGRTS 59 >gi|224171812|ref|XP_002339565.1| predicted protein [Populus trichocarpa] gi|222875359|gb|EEF12490.1| predicted protein [Populus trichocarpa] Length = 92 Score = 58.1 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LN + V +CPA+ IP I VDL++L +G + M D+++ + + + I Sbjct: 24 LNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKVHPALKLVQSKELPVVKISG 83 >gi|261885632|ref|ZP_06009671.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 80 Score = 56.9 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Query: 108 VPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 +PV+ G K G + + +++ C ++ +S VD++ L + D+I + DI+ Sbjct: 2 IPVKPFG--TPIGFKNRGVILQSKNGLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIKT 59 Query: 168 PEKTSSMSQLNITIATIV 185 + + + ++ Sbjct: 60 VPGVRILDADRVAVLGVI 77 >gi|328874295|gb|EGG22661.1| hypothetical protein DFA_04791 [Dictyostelium fasciculatum] Length = 238 Score = 56.1 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTILTLDIGK 71 R VGK ++ LR NG +PA I G + IA+ + + + +F L+I Sbjct: 98 RVVVGKAGSKKLRYNGFVPATITGGGLPTQNIAIEWGRLYGLIKTDSFYRNRKFILNIDG 157 Query: 72 ELVHVIPKDYQL-DPVSDILIHADFLQVSEGST 103 + V+ + +S+ + F++ S+ + Sbjct: 158 KEQIVVVLAFAKLHALSERALFLKFVRTSDKAE 190 >gi|253795637|ref|YP_003038733.1| putative Ribosomal L25/TL5/CTC 5S rRNA binding protein [Candidatus Hodgkinia cicadicola Dsem] gi|253739945|gb|ACT34280.1| putative Ribosomal L25/TL5/CTC 5S rRNA binding protein [Candidatus Hodgkinia cicadicola Dsem] Length = 171 Score = 55.0 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 11/149 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPA-IIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L + R G ++R LR G +P ++ G P +A I + Y + + Sbjct: 5 LKLIPRQTTGSRASRKLRSCGLVPGTVLIG--RQPLAVAACEASIKRLAYRQQIDAVL-- 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + QL S H +++QVS +T H P F++ K GK Sbjct: 61 ---NGVRATLLLTNLQLSATSRRPQHVEYVQVSTPLALT-HAPTLFVDSGAPR--KAAGK 114 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLK 155 L + ++ + +P+ I V L + Sbjct: 115 LKPIARTLTTVSSTRLVPNYIKVKLAGFE 143 >gi|221217619|ref|ZP_03589088.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia burgdorferi 72a] gi|221192565|gb|EEE18783.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia burgdorferi 72a] Length = 60 Score = 55.0 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%) Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V+ +V + ++P+ I +DL + GDS+ ++D+ LP I+ Sbjct: 1 MTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 59 >gi|254670776|emb|CBA07078.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] Length = 54 Score = 53.8 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIATIVA 186 NIP + +D ++ GD +H+ DI+LPE S+S N+ +AT+ Sbjct: 2 PANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVATVTG 51 >gi|291550724|emb|CBL26986.1| hypothetical protein RTO_25080 [Ruminococcus torques L2-14] Length = 77 Score = 52.3 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 HE+S + + + VD+ +LK+GD+I + D+ + + M+ T+ TI Sbjct: 2 LHEISFKALPAALVEKVEVDVGELKVGDTIRVCDLPIAQDKDVDLMTDAEATVVTIT 58 >gi|168215664|ref|ZP_02641289.1| hypothetical protein AC7_2295 [Clostridium perfringens NCTC 8239] gi|182382250|gb|EDT79729.1| hypothetical protein AC7_2295 [Clostridium perfringens NCTC 8239] Length = 89 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R NG+ +I D I++ D+ K L +K+ + L + Sbjct: 2 LNANKRDV--KIKCRKFRNNGKATGVINRKNGDNISISVKVSDLDKFL-AKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|18311019|ref|NP_562953.1| hypothetical protein CPE2037 [Clostridium perfringens str. 13] gi|168204724|ref|ZP_02630729.1| hypothetical protein AC3_2622 [Clostridium perfringens E str. JGS1987] gi|168208739|ref|ZP_02634364.1| hypothetical protein AC1_2528 [Clostridium perfringens B str. ATCC 3626] gi|168212926|ref|ZP_02638551.1| hypothetical protein AC5_2383 [Clostridium perfringens CPE str. F4969] gi|182626904|ref|ZP_02954638.1| hypothetical protein CJD_2625 [Clostridium perfringens D str. JGS1721] gi|18145701|dbj|BAB81743.1| hypothetical protein [Clostridium perfringens str. 13] gi|170663596|gb|EDT16279.1| hypothetical protein AC3_2622 [Clostridium perfringens E str. JGS1987] gi|170713203|gb|EDT25385.1| hypothetical protein AC1_2528 [Clostridium perfringens B str. ATCC 3626] gi|170715540|gb|EDT27722.1| hypothetical protein AC5_2383 [Clostridium perfringens CPE str. F4969] gi|177907754|gb|EDT70366.1| hypothetical protein CJD_2625 [Clostridium perfringens D str. JGS1721] Length = 89 Score = 51.9 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R NG+ +I D I++ D+ K L +K+ + L + Sbjct: 2 LNANKRDV--KIKCRKFRNNGKATGVINRKNGDNISISVKISDLDKFL-AKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|330829752|ref|YP_004392704.1| ribosomal L25p family [Aeromonas veronii B565] gi|328804888|gb|AEB50087.1| Ribosomal L25p family [Aeromonas veronii B565] Length = 48 Score = 51.1 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 54 RLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 F ++LTL I E V+V K Q PV LIH DF++V Sbjct: 4 AQEKPEFYESVLTLVINGEEVNVKVKAIQRHPVRYKLIHLDFVRV 48 >gi|110803727|ref|YP_699318.1| hypothetical protein CPR_2009 [Clostridium perfringens SM101] gi|169343797|ref|ZP_02864796.1| hypothetical protein CPC_2286 [Clostridium perfringens C str. JGS1495] gi|110684228|gb|ABG87598.1| hypothetical protein CPR_2009 [Clostridium perfringens SM101] gi|169298357|gb|EDS80447.1| hypothetical protein CPC_2286 [Clostridium perfringens C str. JGS1495] Length = 89 Score = 50.7 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A RD K R R NG+ +I D I++ D+ K L +K+ + L + Sbjct: 2 LDANKRDV--KIKCRKFRNNGKATGVINRKNGDNISISVKISDLDKFL-AKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|294909501|ref|XP_002777781.1| hypothetical protein Pmar_PMAR008716 [Perkinsus marinus ATCC 50983] gi|239885743|gb|EER09576.1| hypothetical protein Pmar_PMAR008716 [Perkinsus marinus ATCC 50983] Length = 285 Score = 50.4 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 8/100 (8%) Query: 87 SDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDS 146 + F + + VPV + S ++++ + L C IP Sbjct: 63 KSEIEAVAF---DDDPQAHIDVPVTLVGVFGSHAHLNRAQIDLAMPTIKLQCVGEKIPPP 119 Query: 147 ITVDLNDLKIGD---SIHMEDIR--LPEKTSSMSQLNITI 181 VD + L++ + +I + DI+ LPE ++ + + Sbjct: 120 FLVDCSKLRMEEPYGAITLRDIQHLLPEDGTARFHPSYDV 159 >gi|330841854|ref|XP_003292904.1| hypothetical protein DICPUDRAFT_41299 [Dictyostelium purpureum] gi|325076805|gb|EGC30563.1| hypothetical protein DICPUDRAFT_41299 [Dictyostelium purpureum] Length = 200 Score = 48.8 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 2/91 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTILTLDIGK 71 R GK A+ +R IPA I G K I + I L + L++ Sbjct: 57 RVVKGKAGAKRVRHAEFIPATITGGGLPLKNIQIEWGRIKGLLTTGKLYKNRKFLLNLDD 116 Query: 72 ELVHVIPKDY-QLDPVSDILIHADFLQVSEG 101 + + Q P+S+ ++ F + +E Sbjct: 117 KEQLIGKLAVAQFHPLSEQVLFLKFSRSTED 147 >gi|110800018|ref|YP_696717.1| hypothetical protein CPF_2294 [Clostridium perfringens ATCC 13124] gi|110674665|gb|ABG83652.1| hypothetical protein CPF_2294 [Clostridium perfringens ATCC 13124] Length = 89 Score = 48.8 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R N + +I D I++ D+ K L +K+ + L + Sbjct: 2 LNANKRDV--KIKCRKFRNNRKATGVINRKNGDNISISVKISDLDKFL-AKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + +I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNVININLREI 89 >gi|297722347|ref|NP_001173537.1| Os03g0612600 [Oryza sativa Japonica Group] gi|255674701|dbj|BAH92265.1| Os03g0612600 [Oryza sativa Japonica Group] Length = 66 Score = 48.4 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI-TIATIVA 186 + + LCPA +IP I VDL +L IGD + M DI + +S+ + I+A Sbjct: 4 IRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHPSLRLLSKNETMPVCKILA 61 >gi|299471227|emb|CBN79082.1| ribosomal protein L25, Ctc-form [Ectocarpus siliculosus] Length = 293 Score = 47.7 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 81/260 (31%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIY------------GNMS-----DPKPIAL 46 +E ++ R + G AR +R+ G++P ++Y G DP + + Sbjct: 11 REMRVQVRPRGEYGSRGARRIRRAGKVPGVVYSNSDNRGHSSRPGGGVGRPADDPILVKV 70 Query: 47 SAKDISKRLY--SKNFMTTILTLDIGKEL------------------------------- 73 + + + + +F T+ L I E Sbjct: 71 DKIVLDREVRRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTVTDPGAGGDRGKEEEEG 130 Query: 74 ----------------------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 V+ +L PV L+ ++++ G +P++ Sbjct: 131 VSAGEGGVEGGAQQQQQQPERRELVLANQSRLHPVFRTLLSVNWIRYKAGR--KYPIPIK 188 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCP--ANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 FIN + + ++G + + +L P +P + +DL ++ G + + D+ +PE Sbjct: 189 FINSDLNENFRKGAYIRRLKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPE 248 Query: 170 KTSSM--SQL---NITIATI 184 ++ N + TI Sbjct: 249 GILLHRANEPGMWNEVVCTI 268 >gi|66814348|ref|XP_641353.1| hypothetical protein DDB_G0280287 [Dictyostelium discoideum AX4] gi|60469376|gb|EAL67370.1| hypothetical protein DDB_G0280287 [Dictyostelium discoideum AX4] Length = 199 Score = 46.5 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTILTLDIGK 71 R GK A+L+R N +PA I G K I++ I+ + SK F L+I Sbjct: 52 RKVKGKAGAKLVRYNDFVPATITGGGLPLKNISIEWGRINGLISSKKFYKERKFLLNIDD 111 Query: 72 ELVHV-IPKDYQLDPVSDILIHADFLQVSEG 101 + + QL P+++ + F + +E Sbjct: 112 KEKIIGKLSHAQLHPITERAMFIKFCRSAED 142 >gi|167948534|ref|ZP_02535608.1| 50S ribosomal protein L25/general stress protein Ctc [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 33 Score = 45.7 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 P+ F N+ +PG K GG+ + + +V + C Sbjct: 2 PLHFTNQETAPGTKAGGQASHMLSDVEITCLP 33 >gi|281211670|gb|EFA85832.1| hypothetical protein PPL_01063 [Polysphondylium pallidum PN500] Length = 235 Score = 45.0 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT---ILTLDI 69 R G+ + LR NG +PA I G + I + I + NF +L ++ Sbjct: 93 RVVKGRAGVKRLRFNGYVPATITGGGLPLRNIVVEWGRIYGLTKTSNFYKNRKYVLNMN- 151 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 E V V + VS+ + F++ ++ Sbjct: 152 ENEKVVVRLAHVEAHAVSERALFIKFVRTNDD 183 >gi|254519883|ref|ZP_05131939.1| predicted protein [Clostridium sp. 7_2_43FAA] gi|226913632|gb|EEH98833.1| predicted protein [Clostridium sp. 7_2_43FAA] Length = 92 Score = 44.6 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A +RD KG ++LR +G + I + I++ + + + N + + Sbjct: 3 VMLEAKLRDLKKKG--KVLRNSGLVTGTIKRKNGETSLISMVSHKLETYILR-NGLNATM 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +++ ++ + Q D V +I+ D +++ Sbjct: 60 KVNLEGNVIDTKIRRAQKDIVLHNIINIDLIEI 92 >gi|146179610|ref|XP_001020631.2| hypothetical protein TTHERM_00220590 [Tetrahymena thermophila] gi|146144584|gb|EAS00386.2| hypothetical protein TTHERM_00220590 [Tetrahymena thermophila SB210] Length = 321 Score = 41.9 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 64/178 (35%), Gaps = 13/178 (7%) Query: 3 QKECKLSAVMRDKVGKGSA--RLLRKNGQIPAIIYGNMSDPKP---IALSAKDISKRLYS 57 +++ + A R + + + LR P +Y P + + + Sbjct: 63 KEKVVVPAEFRTEKDSLISLKKELRS----P--VYIKGHTGIPDVDLIADNRQVFSIRRR 116 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 F +G E Q+ P+ L+++ + + G ++ +P+ + + Sbjct: 117 LQFQNQSFYFKVGNEEFRCTYDHIQIHPMEKWLVYSKYRRYVVGKPNSIFLPINILPTFQ 176 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSS 173 + I +G ++ + + + + P SI +D +L + + DI LP+ Sbjct: 177 NNAIVRGSEIVQLLDGIWVNSYNDEYPHSIVIDPENLSKIRPLRIGDIHNFLPDGVEI 234 >gi|332289989|ref|YP_004420841.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Gallibacterium anatis UMN179] gi|330432885|gb|AEC17944.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Gallibacterium anatis UMN179] Length = 868 Score = 41.9 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + FI ++ G+ GGK+ + + + A +P I VD+ L +GD I DI Sbjct: 264 IPFIPNKRAGGVVLGGKIAPIFFNTLE---DAGALP--IEVDVTSLNMGDVI---DIYPY 315 Query: 169 EKTSSMSQLNITIAT 183 E + +AT Sbjct: 316 EGKICRHNSDEVLAT 330 >gi|213028278|ref|ZP_03342725.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 36 Score = 41.1 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%) Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +LTL + + V V + Q L H DF++ Sbjct: 2 VLTLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA 36 >gi|257455878|ref|ZP_05621097.1| aconitate hydratase 2 [Enhydrobacter aerosaccus SK60] gi|257446726|gb|EEV21750.1| aconitate hydratase 2 [Enhydrobacter aerosaccus SK60] Length = 866 Score = 39.2 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 9/68 (13%) Query: 117 KSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 ++ G+ GGK+ + + + A ++P I VD++ L +GD DI + + Sbjct: 268 RAGGLVLGGKIAPIFFNTME---DAGSLP--IEVDVSKLNMGDVF---DIYPHDGKITKH 319 Query: 176 QLNITIAT 183 + IAT Sbjct: 320 DSDEVIAT 327 >gi|254362919|ref|ZP_04978986.1| aconitate hydratase [Mannheimia haemolytica PHL213] gi|153094565|gb|EDN75382.1| aconitate hydratase [Mannheimia haemolytica PHL213] Length = 868 Score = 38.4 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + +I ++ G+ GGK+ + + + A ++P I VD+ +L +GD I DI Sbjct: 264 IPYIPNKRAGGVVLGGKIAPIFFNTLE---DAGSLP--IEVDVTNLNMGDVI---DIYPY 315 Query: 169 EKTSSMSQLNITIA 182 + +A Sbjct: 316 AGKICKHNSDEVLA 329 >gi|290476429|ref|YP_003469334.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Xenorhabdus bovienii SS-2004] gi|289175767|emb|CBJ82570.1| bifunctional: aconitate hydratase 2; 2-methylisocitrate dehydratase [Xenorhabdus bovienii SS-2004] Length = 865 Score = 37.6 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + F+ + G+ GGK+ + + + A +P I VD+++L +GD I DI Sbjct: 261 IPFVPNKRGGGVVLGGKIAPIFFNTME---DAGALP--IEVDVSNLNMGDVI---DIYPY 312 Query: 169 EKTSSMSQLNITIAT 183 + N +AT Sbjct: 313 KGEIRHHDTNELLAT 327 >gi|15602069|ref|NP_245141.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Pasteurella multocida subsp. multocida str. Pm70] gi|12720427|gb|AAK02288.1| AcnB [Pasteurella multocida subsp. multocida str. Pm70] Length = 868 Score = 37.6 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 9/74 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + +I ++ G+ GGK+ + + + A ++P I VD+++L +GD I DI Sbjct: 264 IPYIPNKRAGGVVLGGKIAPIFFNTME---DAGSLP--IEVDVSELNMGDVI---DIYPY 315 Query: 169 EKTSSMSQLNITIA 182 + + +A Sbjct: 316 QGKICRHDTDEVLA 329 >gi|170718961|ref|YP_001784127.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Haemophilus somnus 2336] gi|168827090|gb|ACA32461.1| aconitate hydratase 2 [Haemophilus somnus 2336] Length = 832 Score = 37.3 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + +I ++ G+ GGK+ + + + A ++P I VD++ L +GD I D+ Sbjct: 228 IPYIPNKRAGGVVLGGKIAPIFFNTLE---DAGSLP--IEVDVSRLNMGDVI---DVYPY 279 Query: 169 EKTSSMSQLNITIA 182 E N +A Sbjct: 280 EGKICRHDSNDILA 293 >gi|113461413|ref|YP_719482.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Haemophilus somnus 129PT] gi|112823456|gb|ABI25545.1| aconitase [Haemophilus somnus 129PT] Length = 868 Score = 37.3 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + +I ++ G+ GGK+ + + + A ++P I VD++ L +GD I D+ Sbjct: 264 IPYIPNKRAGGVVLGGKIAPIFFNTLE---DAGSLP--IEVDVSRLNMGDVI---DVYPY 315 Query: 169 EKTSSMSQLNITIA 182 E N +A Sbjct: 316 EGKICRHDSNDILA 329 >gi|312144207|ref|YP_003995653.1| hypothetical protein Halsa_1881 [Halanaerobium sp. 'sapolanicus'] gi|311904858|gb|ADQ15299.1| hypothetical protein Halsa_1881 [Halanaerobium sp. 'sapolanicus'] Length = 130 Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 149 VDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 VDL+D+ GD++ + ++ LP T M + I + Sbjct: 88 VDLSDVDPGDNLKIIEVNLPSGTRLMGTDPGYIIVKV 124 >gi|290953418|ref|ZP_06558039.1| hypothetical protein FtulhU_03465 [Francisella tularensis subsp. holarctica URFT1] gi|295313333|ref|ZP_06803954.1| hypothetical protein FtulhU_03450 [Francisella tularensis subsp. holarctica URFT1] Length = 35 Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKRL 55 G+IPA+IYG + + L + L Sbjct: 1 GKIPAVIYGGEKEAVSVLLDLNHFPRPL 28 >gi|52426424|ref|YP_089561.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Mannheimia succiniciproducens MBEL55E] gi|52308476|gb|AAU38976.1| AcnB protein [Mannheimia succiniciproducens MBEL55E] Length = 868 Score = 37.3 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + +I ++ GI GGK+ + + + A +P I VD++ L +GD I DI Sbjct: 264 IPYIPNKRAGGIVLGGKIAPIFFNTLE---DAGALP--IEVDVSALNMGDVI---DIYPY 315 Query: 169 EKTSSMSQLNITIA 182 + + +A Sbjct: 316 AGKICVHNTDQVLA 329 >gi|167745527|ref|ZP_02417654.1| hypothetical protein ANACAC_00218 [Anaerostipes caccae DSM 14662] gi|167655248|gb|EDR99377.1| hypothetical protein ANACAC_00218 [Anaerostipes caccae DSM 14662] Length = 409 Score = 36.9 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI--PDSI---T 148 D ++V + T VP+ + G ++ E+ + + + D I T Sbjct: 215 DEVKVKIKFSRTKTVPIVVKTKGTPAKGYALGSIDYSPEEIEITGEQDALDQVDEIALST 274 Query: 149 VDLND--LKIGDSIHMEDIRLPEKTSSMSQ 176 +D+++ I +I DI+LPE + + Sbjct: 275 IDISNSTKSIEKTIKAADIKLPEGITFVKD 304 >gi|317472909|ref|ZP_07932215.1| YbbR protein [Anaerostipes sp. 3_2_56FAA] gi|316899629|gb|EFV21637.1| YbbR protein [Anaerostipes sp. 3_2_56FAA] Length = 409 Score = 36.9 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI--PDSI---T 148 D ++V + T VP+ + G ++ E+ + + + D I T Sbjct: 215 DEVKVKIKFSRTKTVPIVVKTKGTPAKGYALGSIDYSPEEIEITGEQDALEQVDEIALST 274 Query: 149 VDLND--LKIGDSIHMEDIRLPEKTSSMSQ 176 +D+++ I +I DI+LPE + + Sbjct: 275 IDISNSTKSIEKTIKAADIKLPEGITFVKD 304 >gi|328553269|gb|AEB23761.1| iturin A synthetase A [Bacillus amyloliquefaciens TA208] Length = 3982 Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 21/111 (18%) Query: 18 KGSARLLRKNGQIP--------AIIYGNMSDPKP-IALSAKDISKRLYSKN----FMTTI 64 K + + LR+ G IP G+ ++ K + + N + Sbjct: 1921 KDTVKDLRRGGFIPGGPDSPDDG---GHNKTGIHELSPEQKQLVLASHYGNEASAALNQS 1977 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDI-----LIHADFLQVSEGSTVTVHVPV 110 + L + +L H K V +IH D + V +PV Sbjct: 1978 IMLKVKGKLQHTPLKQAVRHIVGRHEALRTVIHVDDEVQQVQERINVEIPV 2028 >gi|308173804|ref|YP_003920509.1| iturin A synthetase A [Bacillus amyloliquefaciens DSM 7] gi|307606668|emb|CBI43039.1| iturin A synthetase A (B. subtilis) [Bacillus amyloliquefaciens DSM 7] gi|328911945|gb|AEB63541.1| iturin A synthetase A [Bacillus amyloliquefaciens LL3] Length = 3982 Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 21/111 (18%) Query: 18 KGSARLLRKNGQIP--------AIIYGNMSDPKP-IALSAKDISKRLYSKN----FMTTI 64 K + + LR+ G IP G+ ++ K + + N + Sbjct: 1921 KDTVKDLRRGGFIPGGPDSPDDG---GHNKTGIHELSPEQKQLVLASHYGNEASAALNQS 1977 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDI-----LIHADFLQVSEGSTVTVHVPV 110 + L + +L H K V +IH D + V +PV Sbjct: 1978 IMLKVKGKLQHTPLKQAVRHIVGRHEALRTVIHVDDEVQQVQERINVEIPV 2028 >gi|227535814|ref|ZP_03965863.1| beta-lactamase domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227244302|gb|EEI94317.1| beta-lactamase domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 493 Score = 36.9 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%) Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP------- 119 L+I K I K + IHADFL S + + +E + Sbjct: 69 LEIAKANHLNITKVAETH------IHADFLSGSRELAAVTNAELLLSDEGGADWQYQFLH 122 Query: 120 -GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKI---------GDSIHMEDIRLPE 169 G+K G +++ E+ ++ + P+SIT + D K+ GD I + D+ P+ Sbjct: 123 TGLKDGSIISIGQVELKVMHTPGHTPESITFLVRDTKVPATPQRAITGDFIFVGDVGRPD 182 >gi|303239417|ref|ZP_07325944.1| cell wall/surface repeat protein [Acetivibrio cellulolyticus CD2] gi|302592980|gb|EFL62701.1| cell wall/surface repeat protein [Acetivibrio cellulolyticus CD2] Length = 2467 Score = 36.9 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 24/128 (18%) Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV-----RFINENKSPG 120 T+ + ++ V + D + H EG V +PV + + Sbjct: 2068 TIKVDEKTVTTVTVD------DKKVEH---KLEEEGKNAVVTIPVNNNADVVVGQLNGQT 2118 Query: 121 IKQG----GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +K L + V+ PA+ I +D +IG + ++DI++ + + Sbjct: 2119 VKNMETKEAVLEIKTANVTYTLPAS----EINIDAVSSQIGQQVELKDIKV--NVTIAAP 2172 Query: 177 LNITIATI 184 T+ + Sbjct: 2173 PQDTVKVV 2180 >gi|319891380|ref|YP_004148255.1| Zn-dependent hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] gi|317161076|gb|ADV04619.1| Zn-dependent hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] Length = 449 Score = 36.5 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 21/110 (19%) Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-----------NKSPGIKQGGKLNV 129 ++D ++ IHADF + ++ + E ++ +K G + V Sbjct: 47 LRIDYATETHIHADFASGIRDAAEKLNATIFISGEGNESLGYRNIPEQAKFVKDGDVIQV 106 Query: 130 VCHEVSLLCPANNIPDSITVDLN----------DLKIGDSIHMEDIRLPE 169 ++ +L + P+SI+ L L GD I + DI P+ Sbjct: 107 GYIKIEVLHTPGHTPESISFLLTDEGAGATQPMGLFTGDFIFVGDIGRPD 156 >gi|323465440|gb|ADX77593.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 449 Score = 36.5 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 21/110 (19%) Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-----------NKSPGIKQGGKLNV 129 ++D ++ IHADF + ++ + E ++ +K G + V Sbjct: 47 LRIDYATETHIHADFASGIRDAAEKLNATIFISGEGNESLGYRNIPEQAKFVKDGDVIQV 106 Query: 130 VCHEVSLLCPANNIPDSITVDLN----------DLKIGDSIHMEDIRLPE 169 ++ +L + P+SI+ L L GD I + DI P+ Sbjct: 107 GYIKIEVLHTPGHTPESISFLLTDEGAGATQPMGLFTGDFIFVGDIGRPD 156 >gi|298292112|ref|YP_003694051.1| peptidase S58 DmpA [Starkeya novella DSM 506] gi|296928623|gb|ADH89432.1| peptidase S58 DmpA [Starkeya novella DSM 506] Length = 330 Score = 36.5 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Query: 150 DLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 D+ LK+G H D+ L +++ T+A++ G Sbjct: 7 DVAGLKVG---HATDLDLASGVTAILFDEPTVASVDVRGGG 44 >gi|322834382|ref|YP_004214409.1| aconitate hydratase 2 [Rahnella sp. Y9602] gi|321169583|gb|ADW75282.1| aconitate hydratase 2 [Rahnella sp. Y9602] Length = 865 Score = 36.5 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+++L +GD I DI + + + Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVSNLNMGDVI---DIYPYKGEVRNHETD 322 Query: 179 ITIAT 183 +AT Sbjct: 323 EVLAT 327 >gi|167378007|ref|XP_001734630.1| map3k delta-1 protein kinase [Entamoeba dispar SAW760] gi|165903749|gb|EDR29182.1| map3k delta-1 protein kinase, putative [Entamoeba dispar SAW760] Length = 685 Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 21/99 (21%) Query: 22 RLLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKNFMTTIL--TLDIGKELVHVI 77 + LR P ++ +G+ +D I ++ + + + T ++ TL I E + Sbjct: 459 KKLRH----PCVLQFFGSGTDANFILIA----MELMRRGSAHTLLMNKTLPINWERRLKM 510 Query: 78 PKD-----YQLDPVSDILIHADF----LQVSEGSTVTVH 107 KD + L ++ +IH D L V + V V Sbjct: 511 LKDAASGMFYLHSLTPPIIHLDLKSHNLLVDDNWKVKVS 549 >gi|261492076|ref|ZP_05988650.1| aconitate hydratase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496815|ref|ZP_05993187.1| aconitate hydratase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307498|gb|EEY08829.1| aconitate hydratase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312277|gb|EEY13406.1| aconitate hydratase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 870 Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + +I ++ G+ GGK+ + + + A ++P I VD+ +L +GD I Sbjct: 266 IPYIPNKRAGGVVLGGKIAPIFFNTLE---DAGSLP--IEVDVTNLNMGDVI 312 >gi|307546956|ref|YP_003899435.1| flagellar motor switch protein FliM [Halomonas elongata DSM 2581] gi|307218980|emb|CBV44250.1| flagellar motor switch protein FliM [Halomonas elongata DSM 2581] Length = 347 Score = 36.1 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + V L+ ++P I D+ L++GD + + LPE ++ Sbjct: 253 EIRHSTVELVADFADLPSRI-ADVTALEVGDILP---LELPETVTAKVD 297 >gi|207111901|ref|ZP_03246063.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori HPKX_438_CA4C1] Length = 35 Score = 36.1 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 109 PVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPD 145 PV+ ++ G+K G L + +S+ C ++PD Sbjct: 1 PVK--HQGTPVGLKNKGILMLSKKRISVECAPEHLPD 35 >gi|298693359|gb|ADI96581.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED133] Length = 444 Score = 36.1 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-NKSPG----- 120 +++ I + + IHADF ++ + E + G Sbjct: 39 IEVADSEGLTITQATETH------IHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMP 92 Query: 121 -----IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS----------IHMEDI 165 +K G + V ++ +L + P+SI+ L DL G S I + DI Sbjct: 93 SKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDI 152 Query: 166 RLPE 169 P+ Sbjct: 153 GRPD 156 >gi|67466555|ref|XP_649425.1| protein kinase [Entamoeba histolytica HM-1:IMSS] gi|56465865|gb|EAL44038.1| protein kinase, putative [Entamoeba histolytica HM-1:IMSS] Length = 686 Score = 35.7 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 21/99 (21%) Query: 22 RLLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKNFMTTILT--LDIGKELVHVI 77 + LR P ++ +G+ +D I ++ + + + T ++ L I E + Sbjct: 460 KKLRH----PCVLQFFGSGTDANFILIA----MELMRRGSAHTLLMNKSLPINWERRLRM 511 Query: 78 PKD-----YQLDPVSDILIHADF----LQVSEGSTVTVH 107 KD + L ++ +IH D L V + V V Sbjct: 512 LKDAASGMFYLHSLTPPIIHLDLKSHNLLVDDNWKVKVS 550 >gi|258438610|ref|ZP_05689833.1| metallo-beta-lactamase [Staphylococcus aureus A9299] gi|257848169|gb|EEV72161.1| metallo-beta-lactamase [Staphylococcus aureus A9299] Length = 444 Score = 35.7 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-NKSPG----- 120 +++ I + + IHADF ++ + E + G Sbjct: 39 IEVADSEGLTITQATETH------IHADFASGIRDVAKRLNANIYVSGEGEDALGYKNML 92 Query: 121 -----IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS----------IHMEDI 165 +K G + V ++ +L + P+SI+ L DL G S I + DI Sbjct: 93 SKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDI 152 Query: 166 RLPE 169 P+ Sbjct: 153 GRPD 156 >gi|15923077|ref|NP_370611.1| hypothetical protein SAV0087 [Staphylococcus aureus subsp. aureus Mu50] gi|15925791|ref|NP_373324.1| hypothetical protein SA0083 [Staphylococcus aureus subsp. aureus N315] gi|21281786|ref|NP_644872.1| hypothetical protein MW0057 [Staphylococcus aureus subsp. aureus MW2] gi|49484962|ref|YP_042183.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57652428|ref|YP_184969.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87160960|ref|YP_492804.1| hypothetical protein SAUSA300_0086 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148266516|ref|YP_001245459.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150392552|ref|YP_001315227.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|151220240|ref|YP_001331063.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156978417|ref|YP_001440676.1| hypothetical protein SAHV_0086 [Staphylococcus aureus subsp. aureus Mu3] gi|161508352|ref|YP_001574011.1| hypothetical protein USA300HOU_0093 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315720|ref|ZP_04838933.1| hypothetical protein SauraC_06171 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730436|ref|ZP_04864601.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|254664015|ref|ZP_05143487.1| hypothetical protein SauraM_00415 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794439|ref|ZP_05643418.1| beta-lactamase [Staphylococcus aureus A9781] gi|258407599|ref|ZP_05680735.1| beta-lactamase [Staphylococcus aureus A9763] gi|258419875|ref|ZP_05682837.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258443934|ref|ZP_05692272.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|258445133|ref|ZP_05693370.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|258447738|ref|ZP_05695877.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258452231|ref|ZP_05700245.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|258455639|ref|ZP_05703594.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|269201721|ref|YP_003280990.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|282894309|ref|ZP_06302539.1| metal-dependent hydrolase [Staphylococcus aureus A8117] gi|282927923|ref|ZP_06335533.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus A9765] gi|282928339|ref|ZP_06335942.1| metal-dependent hydrolase with rhodanese-y domain (RHOD) [Staphylococcus aureus A10102] gi|284023094|ref|ZP_06377492.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus 132] gi|294850439|ref|ZP_06791170.1| metal-dependent hydrolase with rhodanese-y domain-containing protein [Staphylococcus aureus A9754] gi|295405359|ref|ZP_06815169.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus A8819] gi|296277100|ref|ZP_06859607.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus MR1] gi|297209416|ref|ZP_06925814.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244695|ref|ZP_06928575.1| metal-dependent hydrolase with rhodanese-y domain-containing protein [Staphylococcus aureus A8796] gi|300911415|ref|ZP_07128864.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|13700003|dbj|BAB41302.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14245854|dbj|BAB56249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203221|dbj|BAB93922.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49243405|emb|CAG41825.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286614|gb|AAW38708.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87126934|gb|ABD21448.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147739585|gb|ABQ47883.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149945004|gb|ABR50940.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|150373040|dbj|BAF66300.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156720552|dbj|BAF76969.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160367161|gb|ABX28132.1| hypothetical protein USA300HOU_0093 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725820|gb|EES94549.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788411|gb|EEV26751.1| beta-lactamase [Staphylococcus aureus A9781] gi|257840824|gb|EEV65281.1| beta-lactamase [Staphylococcus aureus A9763] gi|257844157|gb|EEV68544.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257850818|gb|EEV74762.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|257856041|gb|EEV78960.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|257859020|gb|EEV81884.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257860068|gb|EEV82902.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|257861851|gb|EEV84624.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|262074011|gb|ACY09984.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|282589923|gb|EFB95006.1| metal-dependent hydrolase with rhodanese-y domain (RHOD) [Staphylococcus aureus A10102] gi|282592013|gb|EFB97043.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus A9765] gi|282763354|gb|EFC03484.1| metal-dependent hydrolase [Staphylococcus aureus A8117] gi|285815812|gb|ADC36299.1| Metal-dependent hydrolase with rhodanese-homology domain (RHOD) [Staphylococcus aureus 04-02981] gi|294822709|gb|EFG39147.1| metal-dependent hydrolase with rhodanese-y domain-containing protein [Staphylococcus aureus A9754] gi|294969434|gb|EFG45453.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus A8819] gi|296885877|gb|EFH24812.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178212|gb|EFH37459.1| metal-dependent hydrolase with rhodanese-y domain-containing protein [Staphylococcus aureus A8796] gi|300887594|gb|EFK82790.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|312828606|emb|CBX33448.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129066|gb|EFT85062.1| hypothetical protein CGSSa03_13637 [Staphylococcus aureus subsp. aureus CGS03] gi|315196068|gb|EFU26427.1| hypothetical protein CGSSa01_08664 [Staphylococcus aureus subsp. aureus CGS01] gi|320139503|gb|EFW31374.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142111|gb|EFW33931.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 444 Score = 35.7 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-NKSPG----- 120 +++ I + + IHADF ++ + E + G Sbjct: 39 IEVADSEGLTITQATETH------IHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMP 92 Query: 121 -----IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS----------IHMEDI 165 +K G + V ++ +L + P+SI+ L DL G S I + DI Sbjct: 93 SKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDI 152 Query: 166 RLPE 169 P+ Sbjct: 153 GRPD 156 >gi|88193857|ref|YP_498642.1| hypothetical protein SAOUHSC_00036 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87201415|gb|ABD29225.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|329731730|gb|EGG68090.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 444 Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE-NKSPG----- 120 +++ I + + IHADF ++ + E + G Sbjct: 39 IEVADSEGLTITQATETH------IHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMP 92 Query: 121 -----IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS----------IHMEDI 165 +K G + V ++ +L + P+SI+ L DL G S I + DI Sbjct: 93 SKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDI 152 Query: 166 RLPE 169 P+ Sbjct: 153 GRPD 156 >gi|253689915|ref|YP_003019105.1| aconitate hydratase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756493|gb|ACT14569.1| aconitate hydratase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 865 Score = 35.3 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+NDL +GD I DI E N Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVNDLNMGDVI---DIYPYEGEVRRHDTN 322 Query: 179 ITIAT 183 +AT Sbjct: 323 EVLAT 327 >gi|50122700|ref|YP_051867.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Pectobacterium atrosepticum SCRI1043] gi|49613226|emb|CAG76677.1| aconitate hydratase 2 [Pectobacterium atrosepticum SCRI1043] Length = 865 Score = 35.3 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+NDL +GD I DI E N Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVNDLNMGDVI---DIYPYEGEVRRHDTN 322 Query: 179 ITIAT 183 +AT Sbjct: 323 EVLAT 327 >gi|261822974|ref|YP_003261080.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Pectobacterium wasabiae WPP163] gi|261606987|gb|ACX89473.1| aconitate hydratase 2 [Pectobacterium wasabiae WPP163] Length = 865 Score = 35.3 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+NDL +GD I DI E N Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVNDLNMGDVI---DIYPYEGEVRRHDTN 322 Query: 179 ITIAT 183 +AT Sbjct: 323 EVLAT 327 >gi|227115461|ref|ZP_03829117.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 865 Score = 35.3 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+NDL +GD I DI E N Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVNDLNMGDVI---DIYPYEGEVRRHDTN 322 Query: 179 ITIAT 183 +AT Sbjct: 323 EVLAT 327 >gi|90409726|ref|ZP_01217743.1| putative efflux protein [Photobacterium profundum 3TCK] gi|90329079|gb|EAS45336.1| putative efflux protein [Photobacterium profundum 3TCK] Length = 1020 Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 17/62 (27%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 +YG+ +P + L AK++ +RL + K +L V + +++ Sbjct: 145 VYGDGIEPSELRLYAKELQRRLKTVEG-----------------IKKIELHGVRNQVVNI 187 Query: 94 DF 95 D Sbjct: 188 DL 189 >gi|271502013|ref|YP_003335039.1| aconitate hydratase 2 [Dickeya dadantii Ech586] gi|270345568|gb|ACZ78333.1| aconitate hydratase 2 [Dickeya dadantii Ech586] Length = 865 Score = 35.3 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Query: 117 KSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 +S G+ GGK+ + + + A +P I VD+ L +GD I D+ + Sbjct: 268 RSGGVVLGGKIAPIFFNTME---DAGALP--IEVDVTKLNMGDVI---DVYPYKGEIRHH 319 Query: 176 QLNITIAT 183 N +A+ Sbjct: 320 DSNELLAS 327 >gi|20090645|ref|NP_616720.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] gi|19915690|gb|AAM05200.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] Length = 481 Score = 35.3 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 91 IHADFLQVSEGSTVTVHVPVRFINENKSP----GIKQGGKLNVVCHEVSLLCPANNIPDS 146 +HADF+ P+ K G+ +G + V +L + P+ Sbjct: 55 LHADFVSGHMDLAELTGAPIYAPEAAKCEFEHVGLVEGDTFEIEDMTVKVLETPGHTPEH 114 Query: 147 I--TV-------DLNDLKIGDSIHMEDIRLPE 169 I V D + GD++ + D+ P+ Sbjct: 115 ISYVVSDTSRGPDPTAVFCGDTLFVGDVGRPD 146 >gi|91776513|ref|YP_546269.1| biotin biosynthesis protein BioC [Methylobacillus flagellatus KT] gi|91710500|gb|ABE50428.1| Biotin biosynthesis protein BioC [Methylobacillus flagellatus KT] Length = 291 Score = 35.3 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 10/45 (22%) Query: 9 SAVMRDKVGKGSARLL-------RKNGQIPA---IIYGNMSDPKP 43 + R +G+G L R G++PA ++YG+ P+P Sbjct: 231 TGRPRGLLGRGFLNRLTEAYEQFRHEGKLPATYEVVYGHAWKPQP 275 >gi|145297512|ref|YP_001140353.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850284|gb|ABO88605.1| aconitate hydratase 2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 865 Score = 34.9 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + F+ ++ G+ GGK+ + + + A +P I VD++ L++GD I Sbjct: 261 IPFVPNKRAGGVCLGGKIAPIFFNTME---DAGALP--IEVDVSKLEMGDVI 307 >gi|330828070|ref|YP_004391022.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratas e [Aeromonas veronii B565] gi|328803206|gb|AEB48405.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratas e [Aeromonas veronii B565] Length = 865 Score = 34.9 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + F+ ++ G+ GGK+ + + + A +P I VD++ L++GD I Sbjct: 261 IPFVPNKRAGGVCLGGKIAPIFFNTME---DAGALP--IEVDVSKLEMGDVI 307 >gi|260771861|ref|ZP_05880779.1| aconitate hydratase 2 [Vibrio metschnikovii CIP 69.14] gi|260613153|gb|EEX38354.1| aconitate hydratase 2 [Vibrio metschnikovii CIP 69.14] Length = 865 Score = 34.9 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + F+ ++ G GGK+ + + + A +P I VD++ L +GD I D+ Sbjct: 261 IPFVPNKRAGGYVLGGKIAPIFLNTME---DAGALP--IEVDVSKLHMGDVI---DVYPY 312 Query: 169 EKTSSMSQLNITIAT 183 E Q +AT Sbjct: 313 EGKVCNHQTGEVLAT 327 >gi|82749808|ref|YP_415549.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus RF122] gi|82655339|emb|CAI79719.1| probable hydroxyacylglutathione hydrolase [Staphylococcus aureus RF122] Length = 444 Score = 34.9 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 21/100 (21%) Query: 91 IHADFLQVSEGSTVTVHVPVRFINE-NKSPG----------IKQGGKLNVVCHEVSLLCP 139 IHADF ++ + E + G +K G + V ++ +L Sbjct: 57 IHADFALGIRDVAKRLNANIYVSGEGEDALGYKNMPSKTQFVKHGDIIQVGNVKLEVLHT 116 Query: 140 ANNIPDSITVDLNDLKIGDS----------IHMEDIRLPE 169 + P+SI+ L DL G S I + DI P+ Sbjct: 117 PGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPD 156 >gi|212637434|ref|YP_002313959.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Shewanella piezotolerans WP3] gi|212558918|gb|ACJ31372.1| Aconitate hydratase 2 [Shewanella piezotolerans WP3] Length = 865 Score = 34.6 bits (79), Expect = 6.5, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 5/43 (11%) Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 A +P I +D++ +++GD I DI E + I Sbjct: 288 DAGALP--IELDVSKMEMGDVI---DIYPYEGLVKRHDSDEVI 325 >gi|50423643|ref|XP_460406.1| DEHA2F01034p [Debaryomyces hansenii CBS767] gi|49656075|emb|CAG88710.1| DEHA2F01034p [Debaryomyces hansenii] Length = 607 Score = 34.6 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 28/143 (19%) Query: 36 GNMSDPKPIA-LSAKDISKRLYSKNFMT-----------TILTLDIGKELVHVIPKDYQL 83 G+ +P + + + F + +I + + VI K+Y Sbjct: 61 GSGHEPLHAGFVGVNALDAAVSGSIFASPSAKQIFAAIKSISSKQNNSKGTLVIVKNY-- 118 Query: 84 DPVSDILIHADF-LQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANN 142 + ++H F L V + + + ++ + G +GG V ++ + Sbjct: 119 ---TGDVLH--FGLAVERAKAHGYKIDMIIVGDDAAVGRSKGGM--VGRRALAATALVHK 171 Query: 143 IP----DSITVDLNDLKI-GDSI 160 I I DL+ LKI GDS+ Sbjct: 172 IVGSAASEIE-DLSRLKILGDSV 193 >gi|310791429|gb|EFQ26956.1| hypothetical protein GLRG_02127 [Glomerella graminicola M1.001] Length = 297 Score = 34.6 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 24/128 (18%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSK-----NFMTTILTLDIGKELVHVIPKDYQ-LDPVS 87 +YG+ ++K L+ N T I ++I + + Q +D V Sbjct: 8 VYGHRG----------AVAKVLHRASSDISNLPTHITKVEIDVNDEPCLIEALQDIDIVV 57 Query: 88 DILIH--AD----FLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 ++ H F++ + V + P G+K G +N HE+ PA Sbjct: 58 SLVGHEGVQRQHGFVRAIPKTNVKLFSPSDLAGRYDEQGLKIG--VNKEKHELETAAPAA 115 Query: 142 NIPDSITV 149 IP ++ + Sbjct: 116 GIPTTVVL 123 >gi|309812055|ref|ZP_07705816.1| bacterial NAD-glutamate dehydrogenase [Dermacoccus sp. Ellin185] gi|308433987|gb|EFP57858.1| bacterial NAD-glutamate dehydrogenase [Dermacoccus sp. Ellin185] Length = 1636 Score = 34.6 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 VR I E + G+ Q G++ H VS+ A + +S VD +D ++ I + D + + Sbjct: 1152 VRVIGEGGNLGVSQRGRIEAAQHGVSVNTDAID--NSAGVDTSDHEVNIKILLAD-AVRD 1208 Query: 170 KTSSMSQLNITIAT 183 ++ + N +A+ Sbjct: 1209 GALALEERNELLAS 1222 >gi|127514352|ref|YP_001095549.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Shewanella loihica PV-4] gi|126639647|gb|ABO25290.1| aconitase [Shewanella loihica PV-4] Length = 865 Score = 34.6 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + F+ ++ G GGK+ + + + A +P I +D++ + +GD I DI Sbjct: 261 IPFVPNKRAGGFCLGGKIAPIFFNTME---DAGALP--IELDVSKMNMGDVI---DIYPY 312 Query: 169 EKTSSMSQLNITI 181 E + + I Sbjct: 313 EGVVKLHGSDEVI 325 >gi|170724655|ref|YP_001758681.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Shewanella woodyi ATCC 51908] gi|169810002|gb|ACA84586.1| aconitate hydratase 2 [Shewanella woodyi ATCC 51908] Length = 865 Score = 34.6 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 139 PANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 A +P I +D++ + +GD I DI + + I Sbjct: 288 DAGALP--IELDVSKMDMGDVI---DIYPYQGVVKRHDSDEVI 325 >gi|227327974|ref|ZP_03831998.1| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 865 Score = 34.6 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 120 GIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGK+ + + + A +P I VD+NDL +GD I DI E N Sbjct: 271 GVVLGGKIAPIFFNTME---DAGALP--IEVDVNDLNMGDVI---DIYPYEGEVRRHDTN 322 Query: 179 ITIAT 183 +AT Sbjct: 323 DVLAT 327 >gi|317493251|ref|ZP_07951673.1| aconitate hydratase 2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918644|gb|EFV39981.1| aconitate hydratase 2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 865 Score = 34.2 bits (78), Expect = 8.2, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 9/67 (13%) Query: 117 KSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 ++ G+ GGK+ + + + A +P I VD++ L +GD I DI + Sbjct: 268 RAGGVVLGGKIAPIFFNTME---DAGALP--IEVDVSKLNMGDVI---DIYPYKGEVRHH 319 Query: 176 QLNITIA 182 + N +A Sbjct: 320 ETNELLA 326 >gi|326800984|ref|YP_004318803.1| Rhodanese-like protein [Sphingobacterium sp. 21] gi|326551748|gb|ADZ80133.1| Rhodanese-like protein [Sphingobacterium sp. 21] Length = 491 Score = 34.2 bits (78), Expect = 8.5, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 17/96 (17%) Query: 91 IHADFLQVSEGSTVTVHVPVRFINENKSP--------GIKQGGKLNVVCHEVSLLCPANN 142 IHADFL S + +E + G+K G + + E+ ++ + Sbjct: 85 IHADFLSGSRELAAVTDAELFLSDEGGTDWQYQFPHTGLKDGSIITIGQVELKVMHTPGH 144 Query: 143 IPDSITVDLNDLKI---------GDSIHMEDIRLPE 169 P+SIT + D KI GD I + D+ P+ Sbjct: 145 TPESITYLVRDTKIPATPQRAITGDFIFVGDVGRPD 180 >gi|183219443|ref|YP_001837439.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909588|ref|YP_001961143.1| short chain dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774264|gb|ABZ92565.1| Short chain dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777865|gb|ABZ96163.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 245 Score = 34.2 bits (78), Expect = 8.7, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 12/76 (15%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++ R +GK A R G AI+YG S P+ I + + Sbjct: 9 KTVLITGASR-GIGKSMALGFRDAG---AIVYGAGSKPESI--------HWMEKEGIHGV 56 Query: 64 ILTLDIGKELVHVIPK 79 +L + VI K Sbjct: 57 VLDVRSEGSAFEVIGK 72 >gi|302877492|ref|YP_003846056.1| biotin biosynthesis protein BioC [Gallionella capsiferriformans ES-2] gi|302580281|gb|ADL54292.1| biotin biosynthesis protein BioC [Gallionella capsiferriformans ES-2] Length = 290 Score = 34.2 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 11/49 (22%) Query: 16 VGKGS-AR------LLRKNGQIPA---IIYGNMSDPKP-IALSAKDISK 53 +GK + AR LR++G++PA ++YG+ P P + I K Sbjct: 236 MGKAAWARLLENYEKLRRDGKLPATYEVVYGHAWKPAPRVNRDGAAIIK 284 >gi|300722088|ref|YP_003711370.1| bifunctional aconitate hydratase 2/ 2-methylisocitrate dehydratase [Xenorhabdus nematophila ATCC 19061] gi|297628587|emb|CBJ89161.1| bifunctional: aconitate hydratase 2; 2-methylisocitrate dehydratase [Xenorhabdus nematophila ATCC 19061] Length = 865 Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 110 VRFINENKSPGIKQGGKLN-VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 + F+ + G+ GGK+ + + + A +P I VD++ L +GD I DI Sbjct: 261 IPFVPNKRGAGVVLGGKIAPIFFNTME---DAGALP--IEVDVSKLNMGDVI---DIYPY 312 Query: 169 EKTSSMSQLNITIAT 183 + + N +A Sbjct: 313 KGEIRRHETNELLAA 327 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.187 0.597 Lambda K H 0.267 0.0573 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,707,372,529 Number of Sequences: 14124377 Number of extensions: 252865367 Number of successful extensions: 565779 Number of sequences better than 10.0: 1774 Number of HSP's better than 10.0 without gapping: 3147 Number of HSP's successfully gapped in prelim test: 256 Number of HSP's that attempted gapping in prelim test: 558025 Number of HSP's gapped (non-prelim): 3439 length of query: 191 length of database: 4,842,793,630 effective HSP length: 131 effective length of query: 60 effective length of database: 2,992,500,243 effective search space: 179550014580 effective search space used: 179550014580 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 78 (34.2 bits)