PSIBLAST alignment of GI: 254780418 and protein with PDB id: 1njm
gi|28948894|pdb|1NJM|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) And The Antibiotic Sparsomycin Length = 237
>gi|28948900|pdb|1NJP|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) Length = 237
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65
+L+A R K I A+ Y N + AL K + ++
Sbjct: 1 MELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQSTTGLFD 53
Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125
G E + K Q+D IH DF V+ G V V VPV +S G QGG
Sbjct: 54 ITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTT--GRSQGEVQGG 111
Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184
+++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T+ ++
Sbjct: 112 LVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSV 171
Query: 185 VAPI 188
+ P
Sbjct: 172 LPPR 175