BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] (191 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652] Length = 203 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512] Length = 203 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42] Length = 233 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 30 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 89 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 90 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 149 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 150 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 209 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 210 IATIVAPAGG 219 >gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CIAT 894] Length = 201 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 99/190 (52%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG LN+V HEV + CPA+ IP+ VDLN KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 IKVGGVLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 202 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 136/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSANTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ VDL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP +G Sbjct: 181 IATIIAPAAG 190 >gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Kim 5] Length = 202 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 95/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGFIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KS G Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ +++ + T Sbjct: 121 LKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTTVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 202 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium leguminosarum bv. viciae 3841] gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv. viciae 3841] Length = 202 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATI+AP G Sbjct: 181 IATIIAPAGG 190 >gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli GR56] Length = 204 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 94/190 (49%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IAL+ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + V+V +PV F NE KSPG Sbjct: 61 MTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFTNEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V H+V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHQVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP +G Sbjct: 181 IATIVAPAAG 190 >gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli CFN 42] gi|109893385|sp|Q2K5U4|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 204 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 135/190 (71%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ +L A R++VGKGSAR LR+NG IPA+IYG+ P IA++ +++KR+++ F Sbjct: 1 MSQETYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV FINE KSPG Sbjct: 61 MTTVATIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN+V HEV + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ + + + T Sbjct: 121 LKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPVIDRDFT 180 Query: 181 IATIVAPISG 190 IATIVAP G Sbjct: 181 IATIVAPAGG 190 >gi|222086595|ref|YP_002545129.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84] Length = 203 Score = 194 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGSAR LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHESYELKAEARERVGKGSARELRRNGLIPAVIYGDKQAPISITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + V+PKDYQLDPV D +H DFL+VS S VTV +PV F+N+ KSPG Sbjct: 61 LTTIATIDVDGTKIKVLPKDYQLDPVRDFTLHIDFLRVSGNSQVTVEIPVHFVNQEKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K GG LN+V HEV + CPA+ IP+ TVDL+ LK GDSIH+ + LP+ ++ + Sbjct: 121 LKAGGVLNIVRHEVEVHCPADAIPEFFTVDLSGLKAGDSIHISHVTLPKGVVPVIADRDF 180 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 181 TIATIVAPAAG 191 >gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43] Length = 234 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R +VGKGSAR LR+NG IPA+IYG+ DP IALS KD++ ++++ F Sbjct: 24 MSN-TYELKAEARAQVGKGSARELRRNGLIPAVIYGDKKDPVSIALSRKDVTLKIHAGGF 82 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTI T+D+ V+PKDYQLDPV D L+H DFL++S+ + VTV +PV F NE KSPG Sbjct: 83 MTTIATIDVDGTKYSVLPKDYQLDPVRDFLMHVDFLRISKNTQVTVEIPVHFENEEKSPG 142 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 IK+GG LNVV H V CPAN+IP+++ VDL L++GD +H+ + LPE +++ + Sbjct: 143 IKRGGVLNVVRHTVECNCPANSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPTITDRDF 202 Query: 180 TIATIVAPIS 189 TIAT+ AP Sbjct: 203 TIATVAAPAG 212 >gi|288958834|ref|YP_003449175.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510] Length = 198 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 81/189 (42%), Positives = 118/189 (62%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R++ GKG+AR R++G+IPA+IYG P I+L + ++ L+ F Sbjct: 1 MTKIIPLGAQTRERAGKGTARQTRRDGRIPAVIYGGKQAPVTISLEKFEFTRVLHQPGFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + + + V+P+D Q PVSDI +H DFL+VS + + V VPV F ++ KS G+ Sbjct: 61 THLFDVTVDGTAHRVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPVEFADQEKSAGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNIT 180 K+GG LN+V HE+ L CPA+NIP+ IT+ +GDSIH+ ++LPE SS ++ + T Sbjct: 121 KRGGVLNIVRHELELSCPADNIPEHITISCEGFDVGDSIHISAVKLPEGVSSAITDRDFT 180 Query: 181 IATIVAPIS 189 IATIVAP Sbjct: 181 IATIVAPSG 189 >gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter asiaticus str. psy62] Length = 191 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF Sbjct: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG Sbjct: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT Sbjct: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 Query: 181 IATIVAPISGS 191 IATIVAPISGS Sbjct: 181 IATIVAPISGS 191 >gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301] Length = 277 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 93/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 70 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 128 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 129 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 188 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LN+V H+V L+ PAN IP+++ VDL L+IGDS+H+ I+LP+ + + + Sbjct: 189 IKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTPAIQDRDF 248 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 249 TIATIAAPAG 258 >gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella bacilliformis KC583] gi|166223664|sp|A1UTH4|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583] Length = 205 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P I++ K++ +++ F Sbjct: 1 MS-KSYTLKAEVRERVGKGSSRELRRNGFIPAVIYGDKQPPLAISVPYKEVFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI TL+IGKE + V+PKDYQLDPV D +H DFL+VS S V V++PV F+NE+ +PG Sbjct: 60 RTTIATLEIGKEKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HE+ PAN IPD+I +DL+ IGDSIH+ ++LPE + + N Sbjct: 120 IKRGGVLNIVRHEIECTAPANAIPDAIQIDLSSYSIGDSIHISAVQLPEGVTPVIQDRNF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis alaskensis RB2256] gi|122985000|sp|Q1GSP2|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256] Length = 212 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 82/186 (44%), Positives = 129/186 (69%), Gaps = 1/186 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + L+A R++ GKG++R LR+NG++PA++YG +P I + K + K+L + +FM ++ Sbjct: 4 QLTLTAETRERGGKGASRELRRNGRVPAVVYGGKEEPLMIHVEEKLLMKQLMTGHFMNSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +++G + + +PKD PV D IHADFL++++ +TV V VPV F NE KSPG+K+G Sbjct: 64 VMIEVGGKQIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPVVFQNEEKSPGLKRG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN+V HE+ L+C A+NIPD I +D+ IGDSIH+ ++ LP+ S ++ + TIAT Sbjct: 124 GVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISNVTLPKGVESAITDRDFTIAT 183 Query: 184 IVAPIS 189 IVAP + Sbjct: 184 IVAPSA 189 >gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT] gi|122985595|sp|Q1H3J2|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT] Length = 207 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R+ G ++R LR+ G +P ++YG + + + K++ + F +IL Sbjct: 3 ITIKATKREGKGTSASRRLRRAGNVPGVVYGGDKEAVSLEFNHKELFLEFRHETFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + V+ +DYQL PV + + H DF +VS V V VP+ FIN + +PG+K Sbjct: 63 NLEVDGQKEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPLHFINADIAPGVKLAG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G + + E + C ++P+ I VDL++L+ G SIH+ I+LP + + + Sbjct: 123 GIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKLPNGVEFVQLAHDNDAAV 182 Query: 182 ATIVAPI 188 A+I P Sbjct: 183 ASISKPR 189 >gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium tumefaciens str. C58] gi|71153115|sp|Q8UDA0|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium tumefaciens str. C58] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 97/191 (50%), Positives = 138/191 (72%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + + V+PKDYQLDPV D +H DFL+VS + V V +PV F NE KS Sbjct: 61 MTTVGTIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKSD- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK GG LN+V H V CPAN+IP++ITVDL+ LKIGDS+H+ +++LP+ + ++ + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKLPKNITPVIADRDF 179 Query: 180 TIATIVAPISG 190 TIATIVAP +G Sbjct: 180 TIATIVAPAAG 190 >gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] Length = 209 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 84/187 (44%), Positives = 118/187 (63%), Gaps = 2/187 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L A RD+ GKGSAR R+ G +PA+IYG+ DP I L+ +++ K L F Sbjct: 1 MSEISTLGASARDRAGKGSARAARREGLVPAVIYGDKQDPVSINLTLRELEKLLTKPGFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L +D+ V+P+D Q PVSD +H DFL+VS S +TV VPV F N+ SPG+ Sbjct: 61 SHLLDIDVAGTKHRVLPRDLQQHPVSDKPLHVDFLRVSASSELTVDVPVEFENDEASPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNIT 180 ++GG LNVV H V + C A++IP+ IT+DL L+IGDS+H+ + LPE ++ + T Sbjct: 121 RRGGVLNVVRHSVEVYCRADSIPEKITIDLTGLQIGDSVHISAVTLPEGVRPTIEDRDFT 180 Query: 181 IATIVAP 187 IATI AP Sbjct: 181 IATIAAP 187 >gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum centenum SW] gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum centenum SW] Length = 205 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 81/189 (42%), Positives = 115/189 (60%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + LSA +RD+ GKG+AR R+ G+IPA+IYGN P I+L + L+ F Sbjct: 1 MTQTIALSAELRDRAGKGTARQTRREGRIPAVIYGNKEKPVMISLEFNQFFRELHRPGFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + ++ + V+P+D Q DPVSD +H DFL+VS + + V +PV F N SPGI Sbjct: 61 THLFSITVDGATHRVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPVEFANGETSPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNIT 180 K+GG LN+V HE+ + C A+NIP+ ITVDL D + SIH+ + LPE +++ + T Sbjct: 121 KRGGVLNIVRHEIEVFCRADNIPEHITVDLADADLNSSIHISAVALPEGVRPTIADRDFT 180 Query: 181 IATIVAPIS 189 IATI AP Sbjct: 181 IATIAAPSG 189 >gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium aromaticivorans DSM 12444] gi|109893374|sp|Q2G6G9|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM 12444] Length = 204 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA RD+ GKG++R LR+ G+ PA+IYG +P I L K + K L + +F Sbjct: 1 MS-ETLHLSAETRDRAGKGASRALRREGRTPAVIYGGNEEPVAIHLEEKALVKALGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ L +G + V +PKD PV+D HADFL+VS+ S V V+VPV F NE KSPG Sbjct: 60 FNSVVELTVGGQTVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LN+V HE+ L+C + IPD I +D+ ++GDSIH+ ++LP S ++ + Sbjct: 120 LKKGGVLNIVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVKSAITDRDF 179 Query: 180 TIATIVAPIS 189 TIATIVAP S Sbjct: 180 TIATIVAPSS 189 >gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium sp. BNC1] gi|123057768|sp|Q11GC6|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1] Length = 210 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L+A R++VGKGSAR +R+NG+IPA+IYG+ P I L K++ R+++ F Sbjct: 1 MS-QSYELTAEARERVGKGSARAIRRNGKIPAVIYGDKQPPLSITLPYKEVFLRIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+D+ E + V+PKDYQLDPV +H DFL+V + + VTV+VPV FIN+ K+PG Sbjct: 60 RTTVATIDLNGEKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 IK+GG LN+V HEV CPAN IPD I VDL L IGDS+H+ ++LPE +++ + Sbjct: 120 IKRGGVLNIVRHEVEFTCPANAIPDFIEVDLTGLDIGDSVHISAVKLPEGIVPTITDRDF 179 Query: 180 TIATIVAPIS 189 TIAT+ AP Sbjct: 180 TIATVAAPAG 189 >gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc [Saccharophagus degradans 2-40] gi|109893392|sp|Q21FL7|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40] Length = 210 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 116/196 (59%), Gaps = 7/196 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L+A RD GKG++R LR+ G +PAI+YG +P+ + ++ ++++K L ++ Sbjct: 1 MSNEDFILNAEARDVSGKGASRRLRREAGLVPAIVYGGRKNPQNVTITLRELTKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+TL+IG VI KD Q P ++ +HADFL+VS+ VP+ FINE S Sbjct: 61 FYSHIITLNIGDSSEQVILKDLQRHPATNFAMHADFLRVSKTKKFNTKVPLHFINEATSK 120 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K+ GK+ E+ + C ++P+ I VDL ++++G +H+ DI LP+ S++ Sbjct: 121 GVKEQGGKVQHSMTELEIACLPADLPEFIEVDLANVELGGIVHISDIVLPKGVESIALQQ 180 Query: 176 --QLNITIATIVAPIS 189 ++ +A+I P Sbjct: 181 GEDHDLPVASIFKPKG 196 >gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium fredii NGR234] gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234] Length = 228 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 95/186 (51%), Positives = 136/186 (73%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS K+++ ++++ F Sbjct: 26 MS-QTYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSIALSTKEVTMKIHAGGF 84 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG Sbjct: 85 MTTVATIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPG 144 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +KQGG LN+V HEV L A+NIP+ ++VDL+ LKIGD++H+ D++LP + ++ + Sbjct: 145 LKQGGTLNIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIADRDF 204 Query: 180 TIATIV 185 T+ATI Sbjct: 205 TVATIA 210 >gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum anthropi ATCC 49188] gi|166223698|sp|A6WZE3|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum anthropi ATCC 49188] Length = 209 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V H+V L+ PAN IP+++ DL L+IGDS+H+ I+LP+ + ++ + Sbjct: 120 IKRGGVLNIVRHDVELIVPANAIPEALEFDLTGLEIGDSVHISAIKLPKGVTAAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis sp. ATCC 49242] Length = 209 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 122/190 (64%), Gaps = 2/190 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E K L+A +R GKG+AR +R+ G+IPA++YG P PI+L K ++ +++ +F+ Sbjct: 1 MAEMKTLAATVRSGTGKGAARSVRREGRIPAVLYGGGEAPLPISLDKKVTTQLIFAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI LDI + IP+DYQLD V D +H DFL++ GS + V+VPV FIN++ +PGI Sbjct: 61 TTIFELDIDGKKERAIPRDYQLDVVKDFPLHVDFLRLKPGSRLKVNVPVHFINQDAAPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNIT 180 K+GG LN+V H V + PA+NIP++IT DL + DS+H+ I LPE + N T Sbjct: 121 KRGGSLNIVYHTVEMWVPADNIPEAITADLAGMDFNDSLHISAIPLPEGCKPTNPDKNFT 180 Query: 181 IATIVAPISG 190 +A++ P G Sbjct: 181 VASLAPPAGG 190 >gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1] Length = 204 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 133/190 (70%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++++ F Sbjct: 1 MS-KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ K+ + V+PKDYQLDPV D +H DFL+VSE S V V++PV F+NE+ +PG Sbjct: 60 RTTVATIEVDKKRIQVLPKDYQLDPVRDFPLHVDFLRVSEKSVVHVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPKGVTPVIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis ATCC 25840] gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840] Length = 233 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 27 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGSGF 85 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 86 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 145 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 146 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 205 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 206 TIATIAAPAG 215 >gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M] gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo] gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A] gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026] gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str. B3196] Length = 233 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 27 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 85 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 86 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 145 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 146 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 205 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 206 TIATIAAPAG 215 >gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1] gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1] Length = 228 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 124/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR+ G++PA+IYG +P I + K++ K+L + +FM +I+ Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTTIHVEEKELVKQLMTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++G E + +PKD L PV+D HADF ++S + V V +PV F+ E +SPG+K+GG Sbjct: 65 KIEVGGETIRTLPKDVALHPVTDRPTHADFFRLSRDAKVEVQIPVVFVGEEQSPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATI 184 LNVV HE+ L+C A+ IP I + + ++GDSIH+ ++ LPE SS++ + TIAT+ Sbjct: 125 VLNVVRHELDLICEADKIPGEIEISVEGKEVGDSIHISEVNLPEGSVSSITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella quintana str. Toulouse] gi|71153120|sp|Q6G0F8|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse] Length = 208 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S K+I ++Y+ F Sbjct: 1 MS-KSYTLKAELRERVGKGSSRELRRNGFIPAVIYGDKQPPLAIAVSYKEIFYKIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+ +G++ + V+PKDYQLDPV D IH DFL+VS S V V +PV F NE+ +PG Sbjct: 60 RTTVATIAVGQQKIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ + PAN IP++I +DL++ IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECIAPANAIPEAIEIDLSNYSIGDSIHISVVKLPKDVTPVIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella canis ATCC 23365] gi|254704788|ref|ZP_05166616.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 3 str. 686] gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] gi|189042347|sp|A9M6K0|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365] gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40] gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686] Length = 207 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella tribocorum CIP 105476] gi|189042346|sp|A9IR85|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476] Length = 209 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F Sbjct: 1 MS-KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTIATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPIIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP S Sbjct: 180 TIATIAAPAS 189 >gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus sp. MP688] gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. SIP3-4] gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus sp. MP688] Length = 205 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +++AV R+ G G++R LR+ G++P I+YG D + K + + F +I Sbjct: 2 QIEITAVKRENQGTGASRRLRRAGKVPGIVYGASKDAVSVEFDHKALFLEFRHEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL++ + V+ +DYQ+ PV + + H DF +VS + V VP+ FIN++ +PG+K Sbjct: 62 LTLNLDGKKEQVVLRDYQMHPVRNTIQHIDFQRVSATEKLHVKVPLHFINQDIAPGVKLS 121 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNIT 180 G + + E + C ++P+ I VDL L+ G SIH+ I+LP+ + + + Sbjct: 122 GGVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSIHLSQIKLPKGVEFVQLAHENDAA 181 Query: 181 IATIVAPISG 190 +A+I P G Sbjct: 182 VASISVPRGG 191 >gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium sp. H13-3] Length = 203 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 96/188 (51%), Positives = 133/188 (70%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS +++KR+++ F Sbjct: 1 MSKESYELKAEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ +D+ + + V+PKDYQLDPV D +H DFL+VS + V V VPV F NE KS Sbjct: 61 MTTVAVIDVDGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKSE- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 IK GG LN+V H V CPAN+IP+ ITVDL+ LKIGDS+H+ +++LP+ ++ + Sbjct: 120 IKIGGVLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKLPKNISPVIADRDF 179 Query: 180 TIATIVAP 187 TIATIVAP Sbjct: 180 TIATIVAP 187 >gi|308050540|ref|YP_003914106.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307632730|gb|ADN77032.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 210 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 5/194 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A +R ++G G++R LR+ ++PA++YG P I L +++ + F + Sbjct: 1 MSQFTFDAEVRTEIGTGASRRLRRAERLPAVLYGADEAPVAITLDHNKVNQAQELEAFYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 IL L+I + V I K Q P L+H DF +V G +T VP+ FINE S G++ Sbjct: 61 QILILNIDGKKVEAIVKAMQRHPYKPKLLHIDFQRVKRGEAMTATVPLHFINEEDSAGVR 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQL 177 GG + + +EV++ C ++P++I VD +L G+++H+ D++ P+ S Sbjct: 121 AGGTVMHLVNEVTIRCLPQDLPENIEVDTLNLNTGETLHLSDLKTPKGVEFPNLEAGSDN 180 Query: 178 NITIATIVAPISGS 191 ++++ +I P GS Sbjct: 181 DLSVVSIQPPKGGS 194 >gi|153876444|ref|ZP_02003761.1| Ribosomal protein L25 [Beggiatoa sp. PS] gi|152067092|gb|EDN66239.1| Ribosomal protein L25 [Beggiatoa sp. PS] Length = 212 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 107/195 (54%), Gaps = 7/195 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ K+ A +R + GKG R LRK G +PAIIYG +P + LS D+ ++L + F + Sbjct: 1 MEQFKIEAQLRTERGKGENRRLRKAGYVPAIIYGGDKEPISLTLSHNDLLRQLEHEAFYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ILT++I + + KD P ++H DF +VSE + VP+ FINE+KS G+K Sbjct: 61 RILTVNIDDQPEQAVLKDLHRHPYRPTILHLDFQRVSEAQKLYREVPLHFINESKSVGVK 120 Query: 123 Q-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------S 175 GG ++ EV + C ++P+ I VDL ++ + D++H+ D+ L E + + Sbjct: 121 LGGGLVSHHLAEVEIRCFPKDLPEFIEVDLTEINLNDTVHLSDLVLSEGVEIVALISKDA 180 Query: 176 QLNITIATIVAPISG 190 N+ +A++ P Sbjct: 181 SRNLPVASVNLPRGA 195 >gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc [Dinoroseobacter shibae DFL 12] gi|189042354|sp|A8LRY8|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dinoroseobacter shibae DFL 12] Length = 211 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P ++YG +DP+PI + ++ +RL + F Sbjct: 1 MAGEIPDLVAEPRAGTGKGAARQARRDGYVPGVVYGGGADPQPIQIKFNELLRRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M T+ L + G+E V VI ++ Q D V D+ H D +++ S V + +PV FINE +P Sbjct: 61 MATLFNLKVEGQEDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLFIPVEFINEGAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L A +IP+SITVDL L IGD++ + + LPE + + Sbjct: 121 GIKKGGVLTAVRPEVELRVTAGDIPESITVDLTGLDIGDTVTISSVTLPEGATPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIQAPSG 190 >gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis 1330] gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 1 str. 9-941] gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis biovar Abortus 2308] gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. 16M] gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis ATCC 23445] gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus S19] gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis ATCC 23457] gi|254689721|ref|ZP_05152975.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 6 str. 870] gi|254694210|ref|ZP_05156038.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 3 str. Tulya] gi|254697864|ref|ZP_05159692.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 2 str. 86/8/59] gi|254702253|ref|ZP_05164081.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis bv. 5 str. 513] gi|254708201|ref|ZP_05170029.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M163/99/10] gi|254710571|ref|ZP_05172382.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis B2/94] gi|254730754|ref|ZP_05189332.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 4 str. 292] gi|256032065|ref|ZP_05445679.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella pinnipedialis M292/94/1] gi|256045157|ref|ZP_05448056.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 1 str. Rev.1] gi|256061587|ref|ZP_05451728.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella neotomae 5K33] gi|256114108|ref|ZP_05454862.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella melitensis bv. 3 str. Ether] gi|256160261|ref|ZP_05457955.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M490/95/1] gi|256255467|ref|ZP_05461003.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti B1/94] gi|256257972|ref|ZP_05463508.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella abortus bv. 9 str. C68] gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260169200|ref|ZP_05756011.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. F5/99] gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99] gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|68053010|sp|Q57BY2|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053226|sp|Q8YIG3|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153128|sp|Q8FZE8|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893347|sp|Q2YLX6|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042348|sp|B0CHX4|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736287|sp|B2S6Z6|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801037|sp|C0REH1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis 1330] gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella abortus bv. 1 str. 9-941] gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308] gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445] gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19] gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457] gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915] gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038] gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M] gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292] gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59] gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870] gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68] gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya] gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94] gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94] gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33] gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10] gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99] gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513] gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1] gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether] gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1] gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9] gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1] gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella sp. BO1] gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2] gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28] gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90] Length = 207 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 213 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 94/186 (50%), Positives = 128/186 (68%), Gaps = 1/186 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HEV CPAN IP+ ITVDL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGANIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIV 185 TIATI Sbjct: 181 TIATIA 186 >gi|260467097|ref|ZP_05813276.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] gi|259029109|gb|EEW30406.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium opportunistum WSM2075] Length = 212 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 92/186 (49%), Positives = 128/186 (68%), Gaps = 1/186 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVKLPAGVKPVISDRDF 180 Query: 180 TIATIV 185 T+ATI Sbjct: 181 TVATIA 186 >gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 191 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 134/191 (70%), Positives = 161/191 (84%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+E KL + R+KVGKGS+RLLR+NG+IPA IYGN+S PK IALS KDISKRLYSK+F Sbjct: 1 MSQEEYKLKTITREKVGKGSSRLLRRNGKIPATIYGNISSPKSIALSTKDISKRLYSKHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTTI T+D+GKE + V+PKDYQLDPVSD+LIH DFLQ+SE ST++V VP+RFIN+NKSPG Sbjct: 61 MTTIFTIDLGKESIRVLPKDYQLDPVSDVLIHMDFLQISEKSTISVQVPIRFINQNKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG LN++CHE+ LLCPAN IPDSI+ DL+ LKIGD+IHM DIRLPE +S+S N T Sbjct: 121 LKMGGSLNIICHEIPLLCPANKIPDSISADLDGLKIGDNIHMTDIRLPEGITSVSHANST 180 Query: 181 IATIVAPISGS 191 IA I APIS S Sbjct: 181 IAKISAPISSS 191 >gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup] Length = 209 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A R++VGKGS+R LR+NG IPA+IYG P I + K+I ++++ F Sbjct: 1 MS-KSYTLKAEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TTI T+ + K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTIATIILDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LN+V HE+ PA+ IP++I +DL IGDSIH+ ++LP+ + + + Sbjct: 120 LKKGGVLNIVRHEIECTAPASAIPEAIEIDLASYSIGDSIHISAVQLPKDVTPIIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|83644562|ref|YP_432997.1| 50S ribosomal protein L25/general stress protein Ctc [Hahella chejuensis KCTC 2396] gi|109893366|sp|Q2SLA2|RL25_HAHCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83632605|gb|ABC28572.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hahella chejuensis KCTC 2396] Length = 208 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A RD GKG++R LR+ +G++P IIYG + P I++S +S L ++ Sbjct: 1 MSN-EFSLNAEKRDVQGKGASRRLRRVDGKVPGIIYGGETAPVAISVSHNQLSHALQNEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTLD+ VI KD Q P I++HADFL+V + + V+VP+ FINE+K Sbjct: 60 FYSHILTLDVEGTNESVILKDLQRHPYKPIIMHADFLRVQKDQKLHVNVPLHFINEDKCE 119 Query: 120 GIKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G++Q GG ++ EV ++C N+P+ I VD+ +++ +H+ D++LPE Sbjct: 120 GVRQGGGSISHQQTEVEVICLPANLPEFIEVDMTSVQVEQILHLSDLKLPEGVELAELTK 179 Query: 175 -SQLNITIATIVAPISG 190 S ++ + + P Sbjct: 180 GSDHDLPVVAVHKPKGA 196 >gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium loti MAFF303099] gi|71153162|sp|Q98HV7|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099] Length = 213 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 93/186 (50%), Positives = 128/186 (68%), Gaps = 1/186 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGSAR +R+NG++PA+IYG+ P IAL+ KDI +++ F Sbjct: 1 MSHDTYELKAEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TTI T+D+ + + V+PKD+QLDPV D +H DFL++ + + V V VPV FINE+KSPG Sbjct: 61 LTTIATIDVDGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HEV CPAN IP+ IT+DL IGDSIH+ ++LP +S + Sbjct: 121 IKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVQLPAGVKPVISDRDF 180 Query: 180 TIATIV 185 TIATI Sbjct: 181 TIATIA 186 >gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21] gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21] Length = 230 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 77/185 (41%), Positives = 125/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR++G++PA+IYG +P I + AK++ K+L + +FM +I+ Sbjct: 5 LTLPAETRERAGKGASRALRRDGRVPAVIYGGKEEPILIHVEAKELVKQLGTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++G + + +PKD L PV+D H DF ++ +G + V VPV F NE SPG+K+GG Sbjct: 65 TIELGGKKIKTLPKDVSLHPVNDRPEHVDFFRMVKGGKIEVQVPVVFTNEEASPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 LNVV HE+ L+C + IP I +D+ ++GDSIH+ +++LP + S ++ + TIAT+ Sbjct: 125 VLNVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISEVKLPAGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|254714754|ref|ZP_05176565.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M644/93/1] gi|254717815|ref|ZP_05179626.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ceti M13/05/1] gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1] gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1] Length = 207 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 92/190 (48%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLLVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++LP+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter litoralis HTCC2594] gi|122544539|sp|Q2NAN1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594] Length = 229 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 81/185 (43%), Positives = 124/185 (67%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R++ GKG++R LR+ G++PA+IYG +P I + K + K+L + +FM +I+ Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTMIHVEEKLLIKQLMTGHFMNSIV 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++IG + V +PKD L PVSD HADF ++++G + V VPV F+NE SPG+K+GG Sbjct: 65 EIEIGGKTVRTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPVVFMNEEASPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIATI 184 LNVV HE+ L+C + IP I +D+ ++GDSIH+ +I LPE + S ++ + TIAT+ Sbjct: 125 VLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISEITLPEGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [polymorphum gilvum SL003B-26A1] gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1] Length = 200 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 82/189 (43%), Positives = 118/189 (62%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F+ Sbjct: 1 MAASYELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITVPIKESTLNLHKGGFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T I +D+ E VI KDYQL PV D L+H DFL+VS +T+TV +PV F+N+ PGI Sbjct: 61 THIGVIDVDGEKHQVIAKDYQLHPVRDELMHIDFLRVSANTTLTVDIPVHFLNQETCPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNIT 180 K+GG LN+V H V + PAN IP+ I +DL +GDS+H+ + LP+ +++ + T Sbjct: 121 KRGGVLNIVRHAVEMTVPANAIPEFIELDLAKADLGDSLHISAVALPKGCQPTITDRDFT 180 Query: 181 IATIVAPIS 189 IATI AP Sbjct: 181 IATIAAPAG 189 >gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3] Length = 205 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 88/188 (46%), Positives = 130/188 (69%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFKAEIREQVGKGSSRKLRRNGFIPAVIYGDKQPPLAISVPYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSVVHVHIPVHFLNEDTAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + + Sbjct: 120 IKRGGILNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDF 179 Query: 180 TIATIVAP 187 TIATI AP Sbjct: 180 TIATIAAP 187 >gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum IMCC1322] Length = 211 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 80/190 (42%), Positives = 120/190 (63%), Gaps = 2/190 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + +SA R++VGKGSAR R+ G +PA+IYG+ +P I +S ++I+K ++ Sbjct: 1 MSDITTISAEQRERVGKGSARAARRAGLVPAVIYGDKKEPLGINMSTREITKIVHQPGIF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + V+ +D Q PVSD ++H DFL+VS V V VPV FINE+ P + Sbjct: 61 GRLLEIVVDGKKSTVLTRDIQFHPVSDTILHMDFLRVSGSVKVAVGVPVEFINEDLCPAL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNIT 180 K GG LNVV HE+ L CPA +IP+ I +DL+ LKIGDSIH+ I LP+ +++ + T Sbjct: 121 KIGGVLNVVRHEIELNCPATDIPEKIIIDLDGLKIGDSIHISAITLPDGVEPTITDRDFT 180 Query: 181 IATIVAPISG 190 +AT+ +P G Sbjct: 181 VATLQSPGGG 190 >gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium vitis S4] gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4] Length = 200 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 92/188 (48%), Positives = 129/188 (68%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R++VGKGS+R LR+NG IPA+IYG+ P I L+ +++KR+++ F Sbjct: 1 MSHASYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPIAITLNTNEVTKRIHAGGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+++ E + V+PKDYQLDPV D +H DFL+VS S VTV VPVRF+N Sbjct: 61 MTTVATIEVNGEKIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVN-EDKSA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K G LN+V H+V L PANNIP++IT DL LKIGDS+H+ ++LP + ++ + Sbjct: 120 VKTGAVLNIVRHDVELQVPANNIPEAITFDLEGLKIGDSVHISAVKLPSGVTPVITDRDF 179 Query: 180 TIATIVAP 187 TIAT+VAP Sbjct: 180 TIATLVAP 187 >gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S] gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S] Length = 204 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 82/190 (43%), Positives = 128/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++G + V + KD PV+D +HADFL+VSE +TV V+VPV F NE+ SPG Sbjct: 60 FNSVVFVEVGGKKVRTLAKDVAFHPVTDRPLHADFLRVSEHATVHVNVPVIFKNEDASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NI 179 +K+GG LN+V HE+ L+ A IPD + +DL L +GDSIH+ ++LP+ + + Sbjct: 120 LKKGGVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGAVKLPKGAKAAHDETDF 179 Query: 180 TIATIVAPIS 189 T+ATIVAP + Sbjct: 180 TVATIVAPSA 189 >gi|307292917|ref|ZP_07572763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] gi|306880983|gb|EFN12199.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingobium chlorophenolicum L-1] Length = 204 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K ++K L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++G + V +PKD PVSD +HADFL+VSE +TV V+VPV F NE+ SPG Sbjct: 60 FNSVVFVEVGGKKVRTLPKDVAFHPVSDRPLHADFLRVSEHATVHVNVPVVFKNEDASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NI 179 +K+GG LN+V HEV L+ A IPD + VDL L +G++IH+ ++LP+ + + Sbjct: 120 LKKGGVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETIHISAVKLPKGAKAAHDETDF 179 Query: 180 TIATIVAPIS 189 T+ATIVAP + Sbjct: 180 TVATIVAPSA 189 >gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] gi|254801065|sp|B8GLA7|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. HL-EbGR7] Length = 212 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 105/190 (55%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R GKG++R LR+ G++PAI+YG DP+PI L + L + F + I Sbjct: 4 NFELQAEPRADQGKGASRRLRRAGKVPAILYGEGKDPQPITLDHNAVMLNLEHEAFYSHI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L++ +G + I +D Q P I++H D L+VSE + VHVP+ F NE G+K Sbjct: 64 LSVKLGGKAEKAILRDVQRHPCKPIILHLDLLRVSEDHAIRVHVPLHFTNEESCVGVKTG 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG ++ EV + C ++P+ I VD+ L +GDS+H+ I LPE S ++ + Sbjct: 124 GGMVSHQMVEVEVECLPKHLPEFIEVDVASLNVGDSLHLSQISLPEGVSIVALSHGPDHD 183 Query: 179 ITIATIVAPI 188 + + +I+ P Sbjct: 184 LPVVSILKPR 193 >gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas sp. SKA58] Length = 208 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 130/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LSA RD+ GKG++R LR+ G++PA+IYGN +P+ I + K +SK L + +F Sbjct: 1 MS-EQLTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLSKLLGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++ +++ + V +PKD PV+D +HADFL+VSE +TV V+VPVRF NE+ +PG Sbjct: 60 FNSVVMVEVNGKAVRTLPKDVAFHPVTDRPLHADFLRVSEHATVNVNVPVRFENEDAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 +K+GG LNVV H+V L+ A NIP+ + VDL ++GDSIH+ + LP+ + + + Sbjct: 120 LKKGGVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSIHISAVTLPKGAKTAIDDRDF 179 Query: 180 TIATIVAPIS 189 TIATIVAP + Sbjct: 180 TIATIVAPSA 189 >gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4] Length = 207 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 87/191 (45%), Positives = 123/191 (64%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A RD+VGKG+AR LR+ G +PA+IYG+ +PI + K+ + L+ F Sbjct: 1 MAT-SYELKASARDRVGKGAARALRREGLLPAVIYGDKKPAQPITIPVKETTLTLHKGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +T I T+DI E VI KDYQL PV D ++H DFL+VS+ +T+TV +PV FINE PG Sbjct: 60 LTHIGTIDIDGEKHQVIAKDYQLHPVRDDVLHVDFLRVSKNTTLTVDIPVTFINEETCPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 +K+GG LNVV H V L PAN IP+++ DL + IGD++H+ LPE +++ + Sbjct: 120 LKKGGMLNVVRHTVELQVPANAIPETLVFDLAKVDIGDTLHISATDLPEGAQPTITDRDF 179 Query: 180 TIATIVAPISG 190 T+AT+ AP G Sbjct: 180 TVATLAAPGGG 190 >gi|331005803|ref|ZP_08329161.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] gi|330420384|gb|EGG94692.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989] Length = 213 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 7/198 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L A R+ GKG++R LR+ +P IIYG P+ I+L KD+ K L ++ Sbjct: 1 MSNEDFVLHAESRELTGKGASRRLRRESSMVPGIIYGGSKKPQMISLLQKDLIKHLENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + I+++++ VI KD Q P ++ H D L+VS+ T VP+ FINE S Sbjct: 61 FYSHIISVEVDGAAQDVILKDLQRHPAKPLIYHLDLLRVSKTKKFTTRVPLHFINEETSK 120 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K QGG ++ E+ + C ++P+ I VDL D++IG ++H+ D+ LP+ S+ Sbjct: 121 GVKVQGGMISHSVTELEISCLPADLPEYIEVDLADVEIGQTVHISDLTLPKGVESVQLSH 180 Query: 175 -SQLNITIATIVAPISGS 191 ++ +A+I P + Sbjct: 181 GHDHDLPVASINKPKGAA 198 >gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73] Length = 208 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 88/188 (46%), Positives = 130/188 (69%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYGN P I++ K+I ++++ F Sbjct: 1 MS-KSYTFKAEIRERVGKGSSRKLRRNGLIPAVIYGNKQPPLAISVPYKEIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I K+ + V+PKDYQLDP+ D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDKQKIQVLPKDYQLDPIRDFPIHVDFLRISATSVVHVHIPVHFLNEDMAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDF 179 Query: 180 TIATIVAP 187 TIATI AP Sbjct: 180 TIATIAAP 187 >gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thioalkalivibrio sp. K90mix] Length = 228 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 106/196 (54%), Gaps = 7/196 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A RD+ G ++R LR+ G++PAI+YG +D +PI L + L F Sbjct: 1 MSM-SFTIEAEKRDEQGSSASRRLRRAGKLPAILYGGENDAQPITLDHNAMVHNLKHDAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+ + + I +D Q P + H D L+VS + VHVP+ F NE + G Sbjct: 60 YSHILTVKLDGKSEKAILRDVQRHPFKPTIYHVDLLRVSANQPIRVHVPLHFHNEEECKG 119 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K GG ++ + +++ + C ++P+SI +D+ ++ +GD+IH+ +++LP+ S+ Sbjct: 120 VKLGGGMVSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHISELKLPKGVESVALMHG 179 Query: 175 SQLNITIATIVAPISG 190 + + +++ P + Sbjct: 180 DDYDYAVVSVLLPRAA 195 >gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium nodulans ORS 2060] gi|254801055|sp|B8IFN5|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium nodulans ORS 2060] Length = 211 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 83/187 (44%), Positives = 120/187 (64%), Gaps = 2/187 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F+ Sbjct: 1 MSAVKPLEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +++G + IP+DYQLDPV D+ +H DFL+V+ G TV V VPV F+N++ +PG+ Sbjct: 61 TTVFEIEVGGRKIRAIPRDYQLDPVKDLPLHVDFLRVTAGQTVAVEVPVHFVNQDAAPGL 120 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ G LNVV H V+L + IPD+I VDL IGD+IH+ D+ LP S + T Sbjct: 121 KQKSGMLNVVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSDLALPAGASLALDPSET 180 Query: 181 IATIVAP 187 +AT+V P Sbjct: 181 VATLVPP 187 >gi|254719568|ref|ZP_05181379.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella sp. 83/13] gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13] gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653] Length = 207 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 91/190 (47%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +VGKGS+R LR+NGQIPA+IYG+ +P IA+S K+I +++ F Sbjct: 1 MS-ETYVLKADLRTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T+++ + + V+PKDYQLDPV D H DFL+VS S V V+VPV F NE +PG Sbjct: 60 KTTVATIEVDGKKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG LNVV H+V L+ PAN IP+++ +DL+ L+IGDS+H+ ++ P+ + + + Sbjct: 120 IKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKPPKGATPAIQDRDF 179 Query: 180 TIATIVAPIS 189 TIATI AP Sbjct: 180 TIATIAAPAG 189 >gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter turnerae T7901] Length = 209 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L+A RD GKG++R LR + +PAI+YG DP+ IA++ + K L ++ F Sbjct: 1 MSTEDFTLNAKARDDQGKGASRRLRHDNLVPAIVYGGEKDPQNIAIAQNEFVKHLENEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL + E VI KD Q P L+HADFL+VS +T VP+ FINE G Sbjct: 61 YSHIVTLVVDGEKQDVILKDLQRHPAKAQLLHADFLRVSRTQKLTTRVPLHFINEESCKG 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 +K QGG + E+ + C ++P+ I VDL D ++G +H+ D+ LP S++ Sbjct: 121 VKLQGGVVAHSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHISDLNLPAGVESVALSHG 180 Query: 176 -QLNITIATI 184 + + TI Sbjct: 181 EDHDQAVVTI 190 >gi|85713257|ref|ZP_01044282.1| Ribosomal protein L25 [Idiomarina baltica OS145] gi|85692926|gb|EAQ30899.1| Ribosomal protein L25 [Idiomarina baltica OS145] Length = 220 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P + L ++ + F Sbjct: 1 MAKLDFNIKATVRTDKGKGASRRLRHADKVPAILYGGKDEPIALELDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILTL+I + I KD Q P L H DF +V +G + HVP+ F+NE + G Sbjct: 61 YSHILTLEIDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTHVPLHFLNEETAKG 120 Query: 121 I-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 + +GG + ++V ++ ++P+ + VD+ +L +GD+IH+ D+ LPE + Sbjct: 121 VKDEGGVVVHHVNDVEIMVLPKDLPEYLEVDIANLSVGDTIHLTDLNLPEGVELVELTKG 180 Query: 175 SQLNITIATIVAPI 188 + + +I AP Sbjct: 181 EDHDQAVVSITAPR 194 >gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia aggregata IAM 12614] Length = 207 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 84/189 (44%), Positives = 123/189 (65%), Gaps = 1/189 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R++VGKG+AR LR+ G +PA+IYG+ PI + K+ + L+ F+ Sbjct: 1 MAASYELKASARNRVGKGAARALRREGLLPAVIYGDKKPALPITIPVKETTITLHKGGFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T I +D+ E VI KD+QL PV D ++H DFL+VS+GST+TV VPV F+NE PGI Sbjct: 61 THIGMIDVDGEKHQVIAKDFQLHPVRDDVMHVDFLRVSKGSTLTVEVPVHFLNEETCPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNIT 180 K+GG LN+V H V + PA+NIP+++ +DL + GDS+H+ ++LPE +++ + T Sbjct: 121 KKGGVLNIVRHTVEMNVPADNIPEALEIDLAKAQPGDSLHISAVKLPEGCQPTITDRDFT 180 Query: 181 IATIVAPIS 189 IATI AP Sbjct: 181 IATIAAPAG 189 >gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothiobacillus neapolitanus c2] Length = 204 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ L A RD GKG++R LR+ G+IPAI+YG P+ + + +I K L + F Sbjct: 1 MSQETFALDAARRDDQGKGASRRLRREGRIPAIVYGGDEAPQSVTILHNEILKHLEHEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I + VI +D P +++HADF +VS ++ V VP+ F+N+ S G Sbjct: 61 YSHVLELNIDGKTSKVILRDLHRHPYKPLIMHADFQRVSANQSLRVTVPLHFLNKETSVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 K GG +NV+ E+ + C AN +P+ I VD+ DL IG SIH+ I++P + Sbjct: 121 AKAGGIVNVILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQIKMPAGVRIHALMLGE 180 Query: 176 QLNITIATIVAPI 188 ++ + I AP Sbjct: 181 DHDVGVVAIHAPK 193 >gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp. MZ1T] gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp. MZ1T] Length = 200 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + + A RD G G++R LR+ G+IP I+YG + +P+++ ++ L + F ++ Sbjct: 2 QIEFKATKRDAQGTGASRRLRRAGRIPGILYGGAGETQPVSMDHNELYHLLRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L++++ + + +D Q P ++H DF +++ G + + VP+ F+ + +P +K Sbjct: 62 LSIEVDGAKQNAVLRDVQWHPFKQQVLHLDFQRIAAGEKMHLKVPLHFVGADVAPAVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G ++ +E+ + C ++P+ I VDL+ L+ G S+H+ I+LP + + + + Sbjct: 122 GCMISHTINELDVQCLPTDLPEFIEVDLSALEAGQSVHVSQIKLPAGVELVQHGEGDPVV 181 Query: 182 AT 183 AT Sbjct: 182 AT 183 >gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella henselae str. Houston-1] gi|71153119|sp|Q6G2L2|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1] Length = 206 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 93/188 (49%), Positives = 131/188 (69%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L A +R++VGKGS+R LR+NG IPA+IYG+ P IA+S KDI ++++ F Sbjct: 1 MS-KSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ TL I K+ + V+PKDYQLDPV D +H DFL++S S V V++PV F+NE+ +PG Sbjct: 60 RTTVATLAIDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 +K+GG LN+V HE+ PAN IP++I +DL+ IGDSIH+ ++LP+ + + Sbjct: 120 LKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVNPVIQDRDF 179 Query: 180 TIATIVAP 187 TIATIVAP Sbjct: 180 TIATIVAP 187 >gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola sp. HTCC2999] Length = 209 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 6/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PAI+YG +P + L+ + + + F Sbjct: 1 MSEAIFNLEAQVRTDLGKGASRRLRHADKVPAILYGADKEPVSLTLAHNKLMQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTLD+ E V + KD Q P ++H DFL+V V +VPV FINE +P Sbjct: 61 YSHVLTLDVDGEKVEALVKDMQRHPYKPKILHVDFLRVDASKAVHTNVPVHFINEETAPA 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK QGG +E+ + C + +P+ I VDL ++++G ++H+ DI LPE SS+ Sbjct: 121 IKTQGGHAEHHVNEIEVSCLPSQLPEFIEVDLTNVELGQTLHLSDITLPEGVSSIELAKG 180 Query: 175 SQLNITIATIVAPISGS 191 ++ + TI A + Sbjct: 181 ESHDLAVVTIKAAKGKA 197 >gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter segnis ATCC 21756] Length = 199 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 104/187 (55%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +RD G G+AR +R+ G+IP ++YG P IA+ A + K LY+ + Sbjct: 1 MAEIILNVEVRDGSGTGAARAVRREGKIPGVLYGGGKAPVNIAVRANEFRKSLYTGKLLG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G E VI K Q PV+D +H D +V E + + VPV F N + S G+K Sbjct: 61 HLVTLQHGDEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHDISVGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V+ H V L CPA+ IP+ + +DL IGD+I + +++LPE + IA Sbjct: 121 KGGSLEVIRHTVELACPADKIPEELVIDLASHDIGDTIRISEVKLPEGVKPAVDRDFVIA 180 Query: 183 TIVAPIS 189 T+ A + Sbjct: 181 TLKASSA 187 >gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53] Length = 204 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+A +R GKG+AR R++G++P I+YG DP+ I + + L F Sbjct: 1 MAGQIPDLNAKVRAGTGKGAARQARRDGEVPGIVYGGGIDPQSINIPFNYLLTTLRKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + G++ V V+ + Q D V D+ IH D +++ S V + +PV FIN + P Sbjct: 61 MSTLFNLKVEGQDDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVNLFIPVEFINGDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV +EV + A +IPD +TVDL + ++GD IH+ D+ LPE + N Sbjct: 121 GIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDVTLPEGAKPVIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPRG 190 >gi|329897177|ref|ZP_08271917.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] gi|328921332|gb|EGG28726.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088] Length = 210 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 112/198 (56%), Gaps = 8/198 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +++ R +GKG++R LR+ +P ++YG DP +++ +KDI K L ++ Sbjct: 1 MS-DQFEVAVSARSDIGKGASRRLRRLENLVPGVVYGGHKDPVSVSVVSKDIEKSLENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LTL+ G + KD Q P ++ ++H DFL+V G + V VP+ F NE+ Sbjct: 60 FYSHVLTLNFGDHTESAVLKDLQRHPATNKVVHLDFLRVVAGEAIKVQVPLHFTNEDTCK 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K GG + E+ + C +IP+ I VD+ ++++G +H+ D+ LP+ +S+ Sbjct: 120 GVKIGGGMVQHQMTEIEVSCLPKDIPEFIEVDMTNVEVGAIVHLSDLTLPKGVTSVALSL 179 Query: 175 -SQLNITIATIVAPISGS 191 + ++ +A++ P G+ Sbjct: 180 GADHDLAVASVTPPKGGA 197 >gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter crescentus NA1000] gi|71153131|sp|Q9AAV8|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801041|sp|B8GZU9|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter crescentus CB15] gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000] Length = 197 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 101/188 (53%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +RD G G+AR R+ G++P ++YG P IA+ A + K LY+ + Sbjct: 1 MAEIILNVEVRDGAGTGNARATRRAGKVPGVLYGGGKAPVNIAVKANEFRKSLYTGKLLG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G+E VI K Q PV+D +H D +V E + + VPV F N S G+K Sbjct: 61 HLVTLQYGEEKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V+ H V L CPA+ IP+ + +DL IGD I + +++LPE + IA Sbjct: 121 KGGTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGVKPAMDRDFVIA 180 Query: 183 TIVAPISG 190 + A + Sbjct: 181 NVKASSAA 188 >gi|327481913|gb|AEA85223.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri DSM 4166] Length = 205 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 112/191 (58%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA+IYG P+ I++ AKD++K L ++ Sbjct: 1 MTDFTLNAQVRSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L++++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+ Sbjct: 61 SHVLSMNVDGQTESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G++ +EV + C ++P+ I VD+ ++++G +HM DI+LP+ + Sbjct: 121 KQQGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVSLAHGS 180 Query: 178 NITIATIVAPI 188 ++ +A + AP Sbjct: 181 DLPVANVHAPR 191 >gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45] Length = 206 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G ++P I + + +L + F Sbjct: 1 MAGEIPDLVALERSGTGKGAARQARRDGMVPGILFGGDAEPLAIQMPFNKMLHQLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + G + V VI +D Q D V D+ H D +++ + + + + V FINE K+P Sbjct: 61 KQTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLFIHVDFINEEKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IPD ITVDL +IGD IH+ D+ LPE + Sbjct: 121 GLKRGGVLTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDVTLPEGVKPTVDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPRG 190 >gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida KT2440] gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida KT2440] Length = 217 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + Sbjct: 21 MTEFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFS 80 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L++ +V+ K Q P ++HADF++V G +T VPV FINE +K Sbjct: 81 HVLELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VK 138 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 139 KGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDK 198 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 199 AVANVHAPR 207 >gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130] Length = 227 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 126/190 (66%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L+A RD+VGKG+AR LR+N +PA+IYG+ DP IAL K+ + +++ F Sbjct: 1 MS-EDNTLTAQARDRVGKGAARELRRNNMVPAVIYGDKKDPLSIALPRKETTLAIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+L +++ + V+PKDYQL PVSD+++H D L+VS + VTV +PV F+NE + G Sbjct: 60 MTTLLDIEVDGKKHKVLPKDYQLHPVSDVVMHVDLLRVSAKTAVTVEIPVVFLNEEECIG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K GG LNVV V + CPAN+IPD+ +DL IGDS+++ + +PE +++ + Sbjct: 120 LKAGGTLNVVRFTVEVNCPANSIPDNFEIDLTSYDIGDSVNISAVDMPEGAEPTITDRDF 179 Query: 180 TIATIVAPIS 189 TIATI P Sbjct: 180 TIATIATPAG 189 >gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas stutzeri A1501] gi|166223708|sp|A4VPC5|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501] Length = 205 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 111/191 (58%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA+IYG + P+ I++ AKD +K L ++ Sbjct: 1 MNDFTLNAQVRSDLGKGASRRLRRNAALVPAVIYGGNNAPQSISILAKDFAKLLENEASF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L L++ + V+ K Q P ++HADF++V G +T VP+ FIN+ S G+ Sbjct: 61 SHVLNLNVDGQNESVLIKALQRHPAKGFVLHADFVRVVAGHKLTATVPLHFINQETSVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 K+ G++ +EV + C ++P+ I VD+ ++++G +HM DI+LP+ + Sbjct: 121 KKQGGEILHNLNEVEVSCMPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVALAHGS 180 Query: 178 NITIATIVAPI 188 ++ +A + AP Sbjct: 181 DLPVANVHAPR 191 >gi|114319446|ref|YP_741129.1| 50S ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] gi|122312594|sp|Q0ABZ8|RL25_ALHEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114225840|gb|ABI55639.1| LSU ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1] Length = 214 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KL A +R + G+G++R LR+ ++PAI+YG +P+ I L+ + + + + F Sbjct: 1 MSAIEMKLDAELRTETGRGASRRLRRAKRVPAIMYGGHQEPQAITLNLLQLDRLMQEEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+++ + VI KD Q P ++ H D +V G V VPV F+NE+K+PG Sbjct: 61 YSQILTVNLDGKSEQVIVKDLQRHPFKPLVEHVDLQRVVAGEKVHTSVPVHFVNEDKAPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 IK GG ++ +E+ + C ++P+ + VD++ L++G +IH+ D+ LP + Sbjct: 121 IKAGGIIHHDLNEIEIACLPKDLPEYLEVDVSALELGSAIHLSDVPLPAGVEIPELVQGA 180 Query: 176 QLNITIATIVAPI 188 + + +I A Sbjct: 181 DHDHPVVSIHASR 193 >gi|88861339|ref|ZP_01135969.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] gi|88816605|gb|EAR26430.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2] Length = 200 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R ++G G++R LR+ G++PAI+YG + + L+ K++ K + F Sbjct: 1 MSNNTYTLDAELRVELGTGASRRLRREGKVPAILYGADKEAVSLVLAHKEVIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P ++ H DF +V + VP FINE K Sbjct: 61 YTHILTLNLNGEKVEVILKDMQRHPFKPVVTHLDFQRVDASHKIHTKVPFHFINEEK--A 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 K G + EV + C N+P+ I VD+ +++G ++H+ D+ LP S+ + Sbjct: 119 TKLGATVAHHVTEVEITCLPANLPEFIEVDVATIEVGATLHLSDVALPAGVVSVELAKGA 178 Query: 176 QLNITIATIVAPIS 189 + + T+ AP Sbjct: 179 DHDQAVVTLNAPKG 192 >gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera mobilis JLW8] Length = 202 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 105/188 (55%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +++AV RD G G++R LR G +P ++YG D P+ ++AK++ + + F ++L Sbjct: 3 IEINAVKRDAKGTGASRRLRHAGSVPGVVYGGGKDAYPLEINAKELFLQFRHEAFHASVL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 TL I + V+ +D+Q+ PV + + H DF +VS + V VP F N + +PG+K G Sbjct: 63 TLIIEGKKESVLLRDFQMHPVRNTIQHVDFQRVSATEKIHVKVPFHFTNADAAPGVKLGG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 G + + E + C A ++P+ I VD++ L++G SIH+ I+LP+ + + + Sbjct: 123 GIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQIKLPKGVEFVQLAHGDDAAV 182 Query: 182 ATIVAPIS 189 A+I Sbjct: 183 ASIAKTRG 190 >gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium medicae WSM419] gi|166223724|sp|A6UBR5|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium medicae WSM419] Length = 207 Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 95/186 (51%), Positives = 134/186 (72%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A R++VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ F Sbjct: 1 MS-ETYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ + + V+PKDYQLDPV D +H DFL+V +GS V+V VPVRF NE KSPG Sbjct: 60 MTTVATIDVDGKKIRVLPKDYQLDPVRDFTMHVDFLRVKKGSQVSVQVPVRFENEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +KQGG LN+V HEV L A+NIP+ +TVDL LKIGD++H+ ++ LP + ++ + Sbjct: 120 LKQGGALNIVRHEVELNVSADNIPEFLTVDLTGLKIGDTVHISNVELPAGATPVITDRDF 179 Query: 180 TIATIV 185 T+ATI Sbjct: 180 TVATIA 185 >gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498] Length = 208 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 88/188 (46%), Positives = 129/188 (68%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFHKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDF 179 Query: 180 TIATIVAP 187 TIATI AP Sbjct: 180 TIATIAAP 187 >gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|207727835|ref|YP_002256229.1| 50s ribosomal protein l25 [Ralstonia solanacearum MolK2] gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551] gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum MolK2] gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum IPO1609] Length = 203 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 107/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTLHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia solanacearum CFBP2957] gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CFBP2957] Length = 203 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 107/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ + + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium meliloti 1021] gi|307305661|ref|ZP_07585408.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] gi|307317664|ref|ZP_07597103.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|71153163|sp|Q92N68|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021] gi|306896822|gb|EFN27569.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti AK83] gi|306902364|gb|EFN32960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium meliloti BL225C] Length = 204 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 98/186 (52%), Positives = 136/186 (73%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A RD+VGKGS+R LR+NG IPA+IYG+ P IALS KD++ ++++ F Sbjct: 1 MS-ETYELKAETRDRVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MTT+ T+D+ E + V+PKDYQLDPV D +H DFL+VS+GS V+V VPV F NE KSPG Sbjct: 60 MTTVATIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +KQGG LN+V HEV L A+NIP+S+TVDL LKIGD++H+ +++LP + ++ + Sbjct: 120 LKQGGALNIVRHEVELNVSADNIPESLTVDLTGLKIGDTVHISNVKLPAGATPVIADRDF 179 Query: 180 TIATIV 185 T+ATI Sbjct: 180 TVATIT 185 >gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C] Length = 208 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 88/188 (46%), Positives = 129/188 (68%), Gaps = 2/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R++VGKGS+R LR+NG IPA+IYG+ P I++ KDI ++++ F Sbjct: 1 MS-KSYTFRAEIRERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFYKIHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ T++I ++ + V+PKDYQLDPV D IH DFL++S S V VH+PV F+NE+ +PG Sbjct: 60 RTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 IK+GG LN+V HE+ A+ IP++I +DL+ IGDSIH+ ++LP+ + + + Sbjct: 120 IKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQERDF 179 Query: 180 TIATIVAP 187 TIATI AP Sbjct: 180 TIATIAAP 187 >gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. CCS2] Length = 221 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L+A +R GKG+AR R++G +P I+YG +DP+ I + + +L F Sbjct: 1 MAGKIPDLNAKVRAGTGKGAARQARRDGDVPGIVYGGGADPQSIIIPFNYLLTKLRKGGF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L I G+E V VI + Q D V D+ H D +++ S V + +PV F+N P Sbjct: 61 MSTLHNLKIEGEEDVRVICRGVQRDVVKDLPTHIDLMRLKRTSRVNIFIPVEFLNAETCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 G+K+GG L VV +EV L A +IP+ I +DL +++IGD+I + D+ LPE + ++ + Sbjct: 121 GVKKGGVLTVVRNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDVTLPEGATPAITDRD 180 Query: 179 ITIATIVAPIS 189 IA + AP + Sbjct: 181 FVIANVQAPRA 191 >gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter aquaeolei VT8] gi|166223694|sp|A1U373|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8] Length = 212 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ + A RD GKG++R LR+ +IPAIIYG D P+A+ ++ K + ++ Sbjct: 1 MS-QDFVIEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILT+DI + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P Sbjct: 60 FFSHILTVDIQGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAP 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 +K QGG ++ EV ++C N+P+ I VDLN++++ +H+ D++LP+ + Sbjct: 120 AVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKVAALQQ 179 Query: 176 --QLNITIATIVAPISG 190 ++ +A+I P Sbjct: 180 GEDHDLPVASIHKPKGA 196 >gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25/general stress protein Ctc [Maricaulis maris MCS10] gi|122316567|sp|Q0ARN7|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10] Length = 215 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L+ +R+ GKG+AR R+ +P I+YG DP + L +I K L +F Sbjct: 1 MS-SNIVLTVDVREGTGKGAARAARREDLVPGIVYGGKLDPVSVTLRGNEIRKALLGGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ +D + VI +D Q PVSD +H D +V E + + V+V V F NE+ P Sbjct: 60 LSNMIEIDHKGKRQTVIARDIQFHPVSDKAMHIDLYRVDEDTKINVNVAVNFTNEDACPA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K+GG LN+V H+V LLCPA +IP+S+ DL L IGDS+H+ I+LP+ +++ + Sbjct: 120 LKRGGVLNIVRHDVELLCPAGSIPESVEADLTGLDIGDSLHISAIKLPKGVVPTITDRDF 179 Query: 180 TIATIVAPIS 189 T+AT+ + Sbjct: 180 TVATLQGSRA 189 >gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas wittichii RW1] gi|166223725|sp|A5V625|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1] Length = 207 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 79/188 (42%), Positives = 122/188 (64%), Gaps = 1/188 (0%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E LSA R++ GKG++R +R+ G++PA+IYG +P I + K + K L++ +F Sbjct: 1 MSEVLDLSAEARERAGKGASRAIRREGRVPAVIYGEKQEPASIHVEEKVLMKLLHTGHFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ LD+G + V +PKD Q PV+D +H DFL++ E + V V+VPV F +E SPG+ Sbjct: 61 NSVVMLDVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEHTKVNVNVPVHFKDEELSPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG LNVV H++ L A IP+ I + L L++G+SIH+ + LP+ S+ +ITI Sbjct: 121 KRGGVLNVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIHLSQVALPKGASAQDHEDITI 180 Query: 182 ATIVAPIS 189 ATIVAP + Sbjct: 181 ATIVAPSA 188 >gi|239996494|ref|ZP_04717018.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii ATCC 27126] Length = 210 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 7/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEANFKLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L +++ ++V V+ KD Q P + H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLEINLDGKVVEVLVKDMQRHPFKPKITHIDFQRVIAGQDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 +K GG E+ + C N+P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCLPKNLPEFIEVDMAGVEMGQTLHLSDLTLPAGVSSVELAKND 180 Query: 175 SQLNITIATIV-APISG 190 ++ + T+ AP + Sbjct: 181 EAHDLAVVTVKPAPKAA 197 >gi|68053213|sp|Q88PX7|RL25_PSEPK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 197 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+A R +GKG++R LR + IPA++YG D + + + AK+I+K ++ + Sbjct: 1 MTEFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L++ +V+ K Q P ++HADF++V G +T VPV FINE +K Sbjct: 61 HVLELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 119 KGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus denitrificans PD1222] gi|166223701|sp|A1B9E9|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222] Length = 208 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G++P I+YG+ +P+PI + + +L + F Sbjct: 1 MAKEIPDLVAEARAGTGKGAARQARREGKVPGIVYGDGKEPQPIQIEFNSLLTKLRAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + G++ V V+ + Q D V D+ H DF+++ + V + + V F N++++P Sbjct: 61 MSTLWNLKVEGQDDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHVNFENQDEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A++IP+ ITVDL +IGD+IH+ D+ LP+ N Sbjct: 121 GLKRGGTLVVVRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDVVLPKGVKPTIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIAAPSG 190 >gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [alpha proteobacterium HTCC2255] Length = 221 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L R GKG+AR R++G +P ++YG +P+ I + + K+L F Sbjct: 1 MAGKIPDLELTPRAGTGKGAARQARRDGLVPGVVYGGGEEPQAITIPFNILFKKLKDGGF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 M+T+ L + G + V + + Q V D+ H DFL++ S + +++PV F+NE S Sbjct: 61 MSTLFNLKVEGSDDVRAVCRGVQRHVVKDLPTHIDFLRLKRDSRINMNIPVHFLNEETSA 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLN 178 G+K+GG L +V EV L+ A NIPD I DL +L+IG++I++ DI LPE T ++ + Sbjct: 121 GLKKGGTLTIVRAEVELMVTAGNIPDYIEADLENLEIGETINISDITLPEDTRPVIADRD 180 Query: 179 ITIATIVAPIS 189 IA I AP Sbjct: 181 FVIANIAAPGG 191 >gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25/general stress protein Ctc [Thiobacillus denitrificans ATCC 25259] gi|109893403|sp|Q3SLR4|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259] Length = 201 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ G G++R LR G++P I+YG + P I L + L + F ++ Sbjct: 2 EIEVIASKRELQGTGASRRLRHAGKVPGIVYGGSTAPVQIELDHNALYHALRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L+L + V+ +D Q P ++H DF +V + + V VP+ F+N SPG+K Sbjct: 62 LSLSVDGAKESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFLNAEVSPGVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNIT 180 GGK + + +E+ + C ++P+ I VD+ L++G SIH D+ LP ++ N Sbjct: 122 GGKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPAGVELVAHVKQENPA 181 Query: 181 IATIVAPISG 190 +A I AP G Sbjct: 182 VAVIHAPKGG 191 >gi|56460038|ref|YP_155319.1| ribosomal protein L25 [Idiomarina loihiensis L2TR] gi|68053046|sp|Q5QV04|RL25_IDILO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56179048|gb|AAV81770.1| Ribosomal protein L25 [Idiomarina loihiensis L2TR] Length = 221 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + A +R GKG++R LR ++PAI+YG +P +AL ++ + F Sbjct: 1 MAELDFNIQATVRTDKGKGASRRLRHEDKVPAILYGGQGEPIALALDHNKVNNMADYEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I+TL+ + I KD Q P L H DF +V +G + ++P+ F+NE + G Sbjct: 61 YSHIVTLEFDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTNLPLHFLNETTAKG 120 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K+ G + ++V + ++P+ + VD+ +L +GD+IH+ D++LP+ + Sbjct: 121 VKEEGGVVVHHVNDVEITVLPKDLPEYLEVDIAELSVGDTIHLTDLKLPKGVELVELTKG 180 Query: 175 SQLNITIATIVAPI 188 + + +I AP Sbjct: 181 EDHDQAVVSITAPR 194 >gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cardiobacterium hominis ATCC 15826] Length = 211 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 4/195 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA++R GKG++R LR+ G +PAI+YG P+A+ D+ K +F Sbjct: 1 MSEYAYTLSAIVRQDSGKGASRRLRREGLVPAIVYGGEGAALPVAVKQDDLVKFGRFDSF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+ L + G+ V VI +D Q + H DF +V G + V + F NE+ S Sbjct: 61 YSQIICLKVEGQGDVEVIVRDVQRHLYKPLYQHMDFQRVVRGQELQATVSLHFTNEDTSV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN- 178 G+K GG + + ++C N+P+ I VD+ ++ +GD IH+ D++LP+ + + Sbjct: 121 GVKAGGIVEHHLNSAEIVCLPRNLPEYIEVDMANVALGDVIHLRDLKLPQGVRLLHDDDR 180 Query: 179 --ITIATIVAPISGS 191 +A I P G+ Sbjct: 181 AEAVVAQITHPNRGA 195 >gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881] Length = 215 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ Sbjct: 1 MSN-EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTL + V + +D Q P +H D L+V + +T++VP+ FINE S Sbjct: 60 FYSHILTLKLDGASVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMNVPLHFINEESSI 119 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 G+K+ G++ EV + C ++P+ I VD+ + ++ IH+ D++LP+ Sbjct: 120 GVKKQGGEIQHNYAEVEVSCLPQHLPEFIEVDMANAELETVIHLSDLKLPKGVELTQLAL 179 Query: 175 -SQLNITIATIVAPI 188 + +A + P Sbjct: 180 GDDHDQPVAAVHQPK 194 >gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003] Length = 199 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A +R GKG+AR R+ G++P I+YG+ +P I L + RL F Sbjct: 1 MAKEIETLVAEVRTGTGKGAARAARREGKVPGIVYGDGKEPLAINLDYNKLLTRLRKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L I G++ V VI + Q D V D+ H DF++ S + + + V F N SP Sbjct: 61 LSTLFNLHIEGQDDVRVICRGVQKDVVKDLPTHIDFMRTHRASRINLFIHVNFDNAEASP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IPD ITVDL IGD IH+ DI LPE N Sbjct: 121 GLKRGGTLTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHINDIPLPEGCKPTIDRNF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANIAAPSG 190 >gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62] Length = 213 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R++G +P I+YG +P I + + K+L + F Sbjct: 1 MAGEIPDLEVTARTGTGKGAARQARRDGLVPGIVYGGGEEPLAINIPYNVLFKKLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + G + V VI + Q D V D+ H D +++ + + + +PV F E+ P Sbjct: 61 LSTLFNLKVEGHDDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIALFIPVEFEGEDDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI++GG L+VV EV L+ A +IP+ +T + L+IGD+I + I LP + + Sbjct: 121 GIRKGGLLSVVRPEVELVVTAGDIPEKLTASIAGLEIGDTITISSIELPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 I I AP Sbjct: 181 VIGNIAAPAG 190 >gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas sp. AL212] Length = 206 Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 109/191 (57%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++SA R GKG++R LR +G++PA+IYG + I + D+ +L + F Sbjct: 1 MK-IEISADKRTLQGKGASRRLRGSGKVPAVIYGGDQAAQSIEMDHNDLFHKLKLEAFHA 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +ILTL + + V+ +D Q+ P ++H DF +V + + + VP+ FIN SPG+K Sbjct: 60 SILTLSVAGKKEPVLLRDVQMHPFKKQVLHVDFQRVDKNKKIHMKVPLHFINAEISPGVK 119 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLN 178 GG + + EV + C ++P+ I+VDL +L G ++H+ D+ LP+ +++ N Sbjct: 120 TSGGIVTHILTEVDITCLPGDLPEFISVDLAELTAGHTLHLSDLVLPKDVETVALAKGDN 179 Query: 179 ITIATIVAPIS 189 + +ATIV P S Sbjct: 180 LPVATIVIPRS 190 >gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 238] Length = 215 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R GKG+AR R++G +P ++YG DP I + + KRL + F Sbjct: 1 MAGKVPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPISINVPFNVLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + G + V VI ++ Q V D+ H DF+++ + + + + V FINE P Sbjct: 61 LSTLFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEEDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K+GG L V +EV L+ A +IP+ +TVDL L++GD+I + I+LP + + Sbjct: 121 ALKEGGVLIPVRNEVELIVTAGDIPEVLTVDLTGLELGDTITISSIKLPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP + Sbjct: 181 VIANLQAPAA 190 >gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodomicrobium vannielii ATCC 17100] Length = 205 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + +L A R+ GK + R LR +P I+YG P +AL + + + + +F+ Sbjct: 1 MAEVIELKAQAREGTGKLANRALRAKKLVPGIVYGGEKGPANVALEYRHVWQHYQTGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +T+ LDI + VIP+D Q+DPV D IH DFL+VS+ S + V +PV F+NE SPG+ Sbjct: 61 STVYLLDIDGKKERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIEVEIPVHFVNEEASPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNIT 180 K+GG LN+V H V L CPA++IP+ ITVDL IGDSIH+ ++LP + +++ + T Sbjct: 121 KRGGALNIVRHAVELSCPADSIPEFITVDLTGYDIGDSIHISAVKLPAGITPTITDRDFT 180 Query: 181 IATIV 185 +ATI Sbjct: 181 VATIA 185 >gi|56476200|ref|YP_157789.1| 50S ribosomal protein L25/general stress protein Ctc [Aromatoleum aromaticum EbN1] gi|68053040|sp|Q5P723|RL25_AZOSE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56312243|emb|CAI06888.1| 50S Ribosomal protein L25 [Aromatoleum aromaticum EbN1] Length = 201 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + G G++R LR+ GQIP IIYG +D + I + ++ L + F ++ Sbjct: 2 QIVFKATQRVEQGTGASRRLRRAGQIPGIIYGADTDAQAITVDHNELYHLLKKETFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L +++ V+ +D Q P ++H DF ++ G + + VP+ FIN + +P +K Sbjct: 62 LMIELEGAKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFINNDTNPAVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G ++ E+ + C N+P+ I VDL L+ G SIH+ ++LPE ++ + + + Sbjct: 122 GCMISHTMTELDIACLPANLPEFIEVDLQSLEAGQSIHVSQLKLPEGVEAVHHGEGDPVV 181 Query: 182 ATIVAPISGS 191 AT + G+ Sbjct: 182 ATALTVKGGA 191 >gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium HTCC2148] Length = 220 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A +R+ GKG++R LR+ G++PAIIYG DP+ + L KDI K L ++ F + Sbjct: 4 QFEVQAELREDTGKGASRRLRRLAGKVPAIIYGGDKDPQSLTLVRKDIEKSLENEAFYSQ 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-K 122 +L +++ E+ I KD Q P + ++HADFL++ E + V+VP+ F+NE G+ Sbjct: 64 VLEVNVAGEVQKAILKDLQRHPAKNNVMHADFLRIDEKVAIKVNVPIHFLNEEDCAGVKM 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 +GG + ++ + C +IP+ I VD+ ++ G IH+ ++ LPE +S++ Sbjct: 124 EGGMIQHQATDIEVSCLPGDIPEYIEVDMLEVITGQIIHLSEVTLPEGVTSVALSLGEDH 183 Query: 178 NITIATIVAPISGS 191 ++ IA++VAP S Sbjct: 184 DLAIASVVAPKGTS 197 >gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter sp. RED65] Length = 211 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 113/196 (57%), Gaps = 7/196 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L+A +R+ G G++R LR+ G+ PAI+YG +P+ + L K++ K + F Sbjct: 1 MANYELNAEVREVKGTGASRRLRREEGKTPAIVYGGDKEPQQVTLQLKELKKAFEDETFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G VI KD Q P ++++H DFL+VS+ + + H+P+ F+NE+ G+ Sbjct: 61 SHIIKLNVGGTAETVIVKDVQRHPYQNLVMHVDFLRVSKSTVIKQHIPLHFLNEDTCKGV 120 Query: 122 K-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 K QGGK+ ++ ++C A +P+ I VDL D+++G +H+ D++LP ++ + Sbjct: 121 KLQGGKITHNMTDIEVICEAGKLPEFIEVDLADVEVGTVLHLSDLKLPAGVEALELTHGA 180 Query: 176 QLNITIATIVAPISGS 191 + + T+ P + Sbjct: 181 DHDAAVLTVDVPKGSA 196 >gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio japonicus Ueda107] gi|226736293|sp|B3PJN6|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107] Length = 203 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ KL A R+ +GKG++R LR+ Q+PAIIYG P +++S ++ K L + Sbjct: 1 MS-EDFKLDATARNDLGKGASRRLRRLADQVPAIIYGGSKAPVNVSVSHNELLKHLQHEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ L+I VI KD Q P ++H DFL+V + + + VP+ FINE S Sbjct: 60 FFSHVIDLNIDGTSESVILKDVQRHPSKAQVLHLDFLRVDKNTKLHKQVPLHFINEATSV 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K QGGK+ ++ + C ++P+ I VDL ++ G +H+ D++LP+ S Sbjct: 120 GVKTQGGKVVHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHISDLKLPKGVISTDLTK 179 Query: 176 --QLNITIATIVAPISG 190 ++ + TI+ G Sbjct: 180 GADHDLAVVTILKAKGG 196 >gi|312958844|ref|ZP_07773363.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] gi|311286614|gb|EFQ65176.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6] Length = 199 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 109/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNNFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G + +VI K Q P ++HADF++V G +T VPV F+ E + Sbjct: 61 SHVIELNVGGKKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V +E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia solanacearum GMI1000] gi|71153161|sp|Q8Y2E2|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia solanacearum GMI1000] Length = 206 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL +L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLPKGVTIVTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax borkumensis SK2] gi|123050701|sp|Q0VS83|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2] Length = 214 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A R GKG++R LR+ ++P I+YG ++P+ I++ +++ K L ++ Sbjct: 1 MSN-EFLLNAESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILTL + V + +D Q P +H D L+V + +T+ VP+ F NE S Sbjct: 60 FYSHILTLKLDGADVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMSVPLHFTNEESSI 119 Query: 120 GIKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K+ G++ EV + C ++P+ I VD+ + ++ +H+ D++LP+ Sbjct: 120 GVKKQGGEIQHNFAEVEVSCLPQHLPEFIEVDMANAELDSVVHLSDLKLPKGVELTQLAL 179 Query: 176 --QLNITIATIVAPI 188 + +A + P Sbjct: 180 GEDHDQPVAAVHQPK 194 >gi|330961721|gb|EGH61981.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. maculicola str. ES4326] Length = 203 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFVNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum PSI07] Length = 203 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 108/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK + L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKLVELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISDLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A + P Sbjct: 181 ANLSVPAG 188 >gi|332306083|ref|YP_004433934.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173412|gb|AEE22666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 213 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 6/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PA++YG + + LS + + + F Sbjct: 1 MSEGIFTLDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ Sbjct: 61 YSHVLTLNVDGKKVEAVVKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAES 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK GG +V + C N++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 121 IKTLGGHAEHHMVDVEISCLPNDLPEFIEVDVANVELGQTLHLSDIALPEGVTSVELAKG 180 Query: 175 SQLNITIATIVAPIS 189 ++ + T+ Sbjct: 181 EDHDLAVVTVKTAKG 195 >gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 82/190 (43%), Positives = 125/190 (65%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LSA R++VGKG++R+LR+ G+ PA+IYG+ +P I + K +++ L + +F Sbjct: 1 MS-ETLHLSAETRERVGKGASRVLRREGRTPAVIYGDNQEPVAIHVEEKALARALGTGHF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +I+ L +G +V +PKD PV+D HADFL+++ V V VPV FINE SPG Sbjct: 60 FNSIVELTVGGTVVRTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPVVFINEEASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NI 179 +K+GG LN+V HE+ L+ ++IPD ITVD+ L++G SIH++DI +P ++ + Sbjct: 120 LKKGGVLNIVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAGVKVVTHEADA 179 Query: 180 TIATIVAPIS 189 TIATIVAP + Sbjct: 180 TIATIVAPSA 189 >gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 493] gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii Dugway 5J108-111] gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii RSA 331] gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuG_Q212] gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella burnetii CbuK_Q154] gi|71153140|sp|Q83AP1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042351|sp|A9KF12|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042352|sp|A9NAT6|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736301|sp|B6J9D8|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736302|sp|B6J329|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493] gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177'] gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111] gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331] gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 334] gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212] gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154] Length = 244 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 107/193 (55%), Gaps = 5/193 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +R+ GK +AR +R+ ++P +YG P+ I L KD+ K L S++ Sbjct: 1 MAAESFELIAELREFTGKSAARRMRRFEDKVPGTVYGAGKAPQSITLLQKDLLKALESES 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ILTL +G + VI K Q ++H DF ++ + ++VP+ F+ E+ P Sbjct: 61 TFSSILTLKVGDKKQKVILKALQRHHTKPKIVHIDFQRIKASEKLIMNVPLHFLGEDDCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G++ GG ++ + EV + C ++P+ I VDL+ L++ +S+H+ +++LP S Sbjct: 121 GVEAGGVVSHLQSEVEIRCLPADLPEYIEVDLSHLQLDESVHLSNLKLPAGVGLTSAVDE 180 Query: 176 QLNITIATIVAPI 188 + + IA++ P Sbjct: 181 EHDSPIASVHMPR 193 >gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37] gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37] Length = 209 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G +P I + + KRL F Sbjct: 1 MAGEIPDLQAQERTGTGKGAARAARRDGMVPGIVFGGDKEPLAINIPFNVLLKRLKQGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G E V VI +D Q D V D+ H DF+++ S V + +PV FINE +P Sbjct: 61 KSTLFNLQVEGHEDVRVICRDVQRDIVKDLPTHVDFMRLRRTSKVNLFIPVEFINEETAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI++GG L VV EV L+ A +IP+ + VDL +++IGD +H+ D+ LPE + + N Sbjct: 121 GIRKGGVLTVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDVTLPEGSKATIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|71734821|ref|YP_273262.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482001|ref|ZP_05636042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627924|ref|ZP_06460878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647281|ref|ZP_06478624.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 2250] gi|298485675|ref|ZP_07003754.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|109893378|sp|Q48MW0|RL25_PSE14 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71555374|gb|AAZ34585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159701|gb|EFI00743.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320327397|gb|EFW83411.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330868892|gb|EGH03601.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881888|gb|EGH16037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. race 4] gi|330988611|gb|EGH86714.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008861|gb|EGH88917.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 203 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|109898884|ref|YP_662139.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudoalteromonas atlantica T6c] gi|123360668|sp|Q15SQ3|RL25_PSEA6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109701165|gb|ABG41085.1| LSU ribosomal protein L25P [Pseudoalteromonas atlantica T6c] Length = 213 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR ++PA++YG + + LS + + + F Sbjct: 1 MSEGIFTLDAEVRTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V + KD Q P + H DFL+V + +VP+ F+NE+K+ Sbjct: 61 YSHVLTLNVDGKKVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAES 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 IK GG +V + C ++P+ I VD+ ++++G ++H+ DI LPE +S+ Sbjct: 121 IKTHGGHAEHHMVDVEISCLPADLPEFIEVDVTNVELGQTLHLSDIALPEGVTSVELAKG 180 Query: 175 SQLNITIATIVAPIS 189 ++ + T+ Sbjct: 181 EDHDLAVVTVKTAKG 195 >gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Allochromatium vinosum DSM 180] Length = 201 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 106/186 (56%), Gaps = 2/186 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++A R G G++R LR+ G +PAI+YG DP+ +++S ++ K L + F + + Sbjct: 4 SFEVNAQPRTGTGTGASRRLRRTGLVPAIVYGAHQDPEMVSVSHNELLKHLEHEAFYSHV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L +G ++ V+ KD Q P ++H DF++VS+ + + VP+ F+NE+ G+K G Sbjct: 64 LDLKVGDDVTKVVLKDMQRHPAKPFILHVDFMRVSQDEKLKMVVPLHFLNEDTCKGVKLG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G ++ EV ++C ++P+ I VD+ +++IG +H+ ++ LPE + + + Sbjct: 124 GVVSHTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSELALPEGVALAHAPDPDEPVV 183 Query: 183 TIVAPI 188 I + Sbjct: 184 VIHSAR 189 >gi|237799721|ref|ZP_04588182.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022576|gb|EGI02633.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. oryzae str. 1_6] Length = 204 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVLHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|66044196|ref|YP_234037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae B728a] gi|75503328|sp|Q4ZXX3|RL25_PSEU2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|63254903|gb|AAY35999.1| Ribosomal protein L25 [Pseudomonas syringae pv. syringae B728a] Length = 204 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGSLEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera sp. 301] gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera sp. 301] Length = 202 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 105/190 (55%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++AV RD G G++R LR+ G +P ++YG + + ++AK++ + F ++ Sbjct: 2 SIEINAVKRDVKGTGASRRLRRAGTVPGVVYGAGKEAVTLEINAKELFLEFRHEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L+L++ + +V+ +D+Q+ PV + + H DF +VS + V VP FIN + +PG+K Sbjct: 62 LSLNLDGKKENVLLRDFQMHPVRNTIQHIDFQRVSATEKIHVKVPFHFINADIAPGVKTG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNIT 180 GG + + E + C A ++P+ + VDL L++G SIH+ I+L + + + Sbjct: 122 GGIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQIKLAKGVEFVQLAHGNDAA 181 Query: 181 IATIVAPISG 190 +A I G Sbjct: 182 VAAIAKTRGG 191 >gi|323388152|gb|ADX60348.1| 50S ribosomal protein L25 noteral stress protein Ctc [Pseudomonas fluorescens] Length = 199 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+I+K L + Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEIAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV F+ E + Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL+ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEVSHVIAEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|289678416|ref|ZP_06499306.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae FF5] gi|302186450|ref|ZP_07263123.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. syringae 642] gi|330899761|gb|EGH31180.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941708|gb|EGH44465.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. pisi str. 1704B] gi|330972808|gb|EGH72874.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aceris str. M302273PT] Length = 204 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2080] Length = 216 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 7/192 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ A +R GKG++R LR+ G++P ++YG + I+L KD+ K + + F + Sbjct: 4 SFEVQAQVRVDEGKGASRRLRRLEGKVPGVVYGGEAAAISISLIRKDLEKMMEQETFYAS 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L +++ + I KD Q P +H DFL+V + V+VP+ F NE+ G+K Sbjct: 64 VLNVNVDGSVETAILKDVQRHPAKGFPMHVDFLRVQADKAIKVNVPLHFTNEDVCHGVKM 123 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQL 177 GG + ++ + C +IPD I VD++ +++G +H+ D+ LP S Sbjct: 124 GGGMVQHQATDMEVQCLPGDIPDYIEVDMSAVELGQIVHLSDVTLPAGVESTALALGDDH 183 Query: 178 NITIATIVAPIS 189 ++ IA+++AP Sbjct: 184 DLAIASVIAPRG 195 >gi|304311481|ref|YP_003811079.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] gi|301797214|emb|CBL45434.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1] Length = 206 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 7/195 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A +R +GKG++R LR+ G +IPAIIYG + P I + K++ K L ++ F Sbjct: 1 MADSFVLNASLRTDLGKGASRRLRRAGTEIPAIIYGGDAAPATITVVYKELVKALENEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ V V+ KD Q P + HADF++V + + VP+ F+NE+K G Sbjct: 61 YSHVLTLNLDGNAVQVVLKDLQRHPARNTPTHADFMRVDATRKIQMVVPLHFVNEDKCVG 120 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 +K QGG ++ EV + C A ++P+ + VD+ L +G +IH+ DI+LP + + Sbjct: 121 VKTQGGAISHQLSEVLISCLAKDLPEFLEVDVAGLALGHAIHLADIKLPAGVNIVELSLG 180 Query: 175 SQLNITIATIVAPIS 189 + N+ + ++ P Sbjct: 181 ADHNLPVVSVYLPRG 195 >gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira multiformis ATCC 25196] gi|109893371|sp|Q2YBH3|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 111/188 (59%), Gaps = 4/188 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R+ GKG++R LR +G++P IIYG + +PI L ++ +L + F +I Sbjct: 2 QIEISAEKRELQGKGASRRLRGSGKVPGIIYGGENPAQPIELDHNNLYHQLKLEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+ + + V+ +D Q+ P ++H DF +V+ + + VP+ FINE+ +PG+K Sbjct: 62 LTMSVEGQKEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLHFINEDIAPGVKLA 121 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNIT 180 G ++ V E+ + C ++P+ I+VD+ +L G++IH+ +++LPE M ++ Sbjct: 122 GGLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEGVEIPALMKGEDLP 181 Query: 181 IATIVAPI 188 +ATI P Sbjct: 182 VATIAIPR 189 >gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides 2.4.1] gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17029] gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides KD131] gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] gi|109893390|sp|Q3IZM8|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223710|sp|A3PMM1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801059|sp|B9KMG3|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1] gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029] gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131] gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides WS8N] Length = 203 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P I+YG +P I + D+ RL F Sbjct: 1 MAGEIPDFQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVPYNDLLNRLKKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L + G+E V VI + Q D V D+ H DF+++ S V + + V F N +K+P Sbjct: 61 LQTLFNLKVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRVNLFIHVTFENHDKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD +TVDL D +IGD IH+ DI+LPE N Sbjct: 121 GLKRGGTLTVVRPEVELEVTAGDIPDHLTVDLTDRQIGDVIHINDIKLPEGAVPTINRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii HTCC2633] Length = 210 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 1/189 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R++ G G AR R+NG +P ++YG P IAL ++ K + S F+ Sbjct: 1 MSDIVLSVEVRERTGTGGARETRRNGFVPGVLYGGDKGPVSIALKNNEVIKAINSGKFLA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++T+D E V+ +D Q PV D +H DF +V E + +TV V V F N+ KSPG+K Sbjct: 61 QMITIDHKGEKQSVLTRDVQFHPVRDEPVHIDFQRVDESTIITVEVTVHFHNDEKSPGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 +GG LNVV H V + PA +IPD I VDL+ IGDSIH+ + LPE + ++ + TI Sbjct: 121 RGGVLNVVRHAVEVNVPAGSIPDQIDVDLSGYDIGDSIHISAVTLPEGVTPAITDRDFTI 180 Query: 182 ATIVAPISG 190 ATI + Sbjct: 181 ATIQNSRAA 189 >gi|330951110|gb|EGH51370.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae Cit 7] Length = 204 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGTLEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc [Methylophilales bacterium HTCC2181] Length = 230 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 112/190 (58%), Gaps = 5/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +++A +R+ G G++R LR G+ P ++YG + + + +K++ + + F Sbjct: 1 MK-IQINANVRELKGTGASRRLRHAGKTPGVLYGGDKEATSLEIDSKELFMQFRHEAFHA 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +ILTL++ + VI +D+Q+ PV + ++H DF +++E ++V VP FINE +PG+K Sbjct: 60 SILTLNLAGKKEAVILRDFQMHPVRNNIVHIDFQRINENEKISVKVPFHFINEETAPGVK 119 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLN 178 +GG ++ + E+ + C ++P I VD++ L IGDSIH+ ++++PE + + + Sbjct: 120 LEGGLISHIMTEIDISCLPKDLPQYIEVDMSALSIGDSIHLSEVKVPEGVELTTLSDEND 179 Query: 179 ITIATIVAPI 188 I +I P Sbjct: 180 PAITSISKPK 189 >gi|320325684|gb|EFW81745.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. glycinea str. B076] Length = 203 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I V+L L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVNLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|332140914|ref|YP_004426652.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] gi|226736275|sp|B4RSW4|RL25_ALTMD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|327550936|gb|AEA97654.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas macleodii str. 'Deep ecotype'] Length = 210 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 7/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSEAIFNLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V V+ KD Q P ++H DF +V G V +VP+ F+NE KS Sbjct: 61 YSHVLTLNLDGKPVEVLVKDMQRHPYKPKIMHIDFQRVIAGEDVHTNVPLHFVNEEKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 +K GG E+ + C ++P+ I VD+ +++G ++H+ D+ LP SS+ Sbjct: 121 VKAGGIAEHHVTEIEVTCQPKDLPEFIEVDMAAVEMGQTVHLSDLTLPAGVSSVELAKND 180 Query: 175 SQLNITIATIV-APISG 190 ++ + T+ AP + Sbjct: 181 EAHDLAVVTVKPAPKAA 197 >gi|330873313|gb|EGH07462.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967422|gb|EGH67682.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. actinidiae str. M302091] Length = 203 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E + Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1] Length = 219 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 85/180 (47%), Positives = 123/180 (68%), Gaps = 2/180 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A R+KVGKG+AR LR+NG IPA+IYG+ DP PIA+ K+ L++ F Sbjct: 1 MS-ETFTVKAEAREKVGKGAARHLRRNGMIPAVIYGDKQDPLPIAIPYKETFLALHAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 MT + T+++ + + V+PKDYQL+PV D L+H DFL+VSE + VTV++PV F NE SPG Sbjct: 60 MTHVATIEVNGQKISVLPKDYQLEPVRDFLMHVDFLRVSEKTRVTVNIPVHFENEEASPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG +NVV HEV + PA+ IP+ T+DL L+IGDSIH + LP+ +++ + Sbjct: 120 LKRGGVINVVRHEVEVHAPASAIPEYFTLDLTGLEIGDSIHASALTLPKNVEVTITDRDF 179 >gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus trichosporium OB3b] Length = 227 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 2/187 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E K L+A +R GKG+AR +R+ G+IP +IYG P P++L K+++K +Y+ +F+ Sbjct: 1 MAEVKKLAAAVRSGTGKGAARSVRREGRIPGVIYGGGDAPTPLSLDQKELTKLIYAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI LDI + IP+DYQLD V D +H DFL++ GS + + VPV FIN SPG+ Sbjct: 61 TTIFELDIDGKTERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLRIDVPVHFINHEASPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNIT 180 K+GG LNVV H V + PA+NIPD IT DL L+ D++H+ LP + N T Sbjct: 121 KRGGSLNVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAFTLPPNCKPTNPDKNFT 180 Query: 181 IATIVAP 187 + +I P Sbjct: 181 VVSITPP 187 >gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter sphaeroides ATCC 17025] gi|166223711|sp|A4WPE3|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025] Length = 203 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P I+YG +P I + D+ RL F Sbjct: 1 MAGEIPDFQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINVKYNDLLNRLKKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L + G+E V VI + Q D V D+ H DF+++ S + + + V F N +++P Sbjct: 61 LQTLFNLKVEGQEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRINLFIHVTFENHDQAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD ITVDL +IGD IH++DI LPE N Sbjct: 121 GLKRGGTLTVVRPEVELEVTAGDIPDHITVDLTGKQIGDVIHIQDIALPEGAVPTINRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia solanacearum CMR15] Length = 206 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 108/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL +L+IG ++H+ D++L + + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLSKGVTIVTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|330811725|ref|YP_004356187.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379833|gb|AEA71183.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 200 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNEFTLNAEVRSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L+IG +V+ K Q P ++HADF++V G +T VPV F+ E I Sbjct: 61 SHIIELNIGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVGEAAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL D ++G IH+ D++ P+ + + Sbjct: 119 KKGGEISHVVSEIEVTCLPKDLPEFIEVDLADAEVGTIIHLSDLKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis ITI-1157] Length = 215 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G DP PI + ++ KRL + F Sbjct: 1 MAGEIPDLVALERTGTGKGAARQARRDGMVPGIVFGGDKDPLPIQIPFNELFKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G E V VI +D Q D V D+ H D +++ S + +++PV FINE +P Sbjct: 61 KSTLWNLKVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIALYIPVEFINEEAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+C A +IP+ ITVDL L I D + + + LP T + Sbjct: 121 GIKKGGVLTVVRPEVELVCTAGDIPEKITVDLTGLNINDVVTISSVELPNGTQPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPTG 190 >gi|256821850|ref|YP_003145813.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] gi|256795389|gb|ACV26045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kangiella koreensis DSM 16069] Length = 229 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 5/192 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +A +R +GKG++R LR+ QIPAI+YG +PK I+L+ I L + Sbjct: 1 MSEYTFNAELRSDMGKGASRRLRREADQIPAIVYGGKEEPKSISLNHNQIINMLDEEAVY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++I+ LDI ++ V+ KD Q ++H D ++ G + +V + FINE +PG+ Sbjct: 61 SSIIKLDIAGKVEEVVIKDIQRHAYKPKVLHMDLKRIVRGEIMNANVALHFINEKSAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----QL 177 K GG ++ V + C N+P+ I VDL L+IG++IH+ D++LPE + + Sbjct: 121 KAGGIVSHQVTSVEVACRPRNLPEYIEVDLGALEIGETIHLSDLKLPEGVELTALQGEEH 180 Query: 178 NITIATIVAPIS 189 ++++A IV P Sbjct: 181 DLSVANIVRPSG 192 >gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia indica subsp. indica ATCC 9039] gi|226736280|sp|B2IG64|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia indica subsp. indica ATCC 9039] Length = 221 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 79/187 (42%), Positives = 123/187 (65%), Gaps = 1/187 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R GKG+AR +R+ G+IP +IYG P+PI L ++++K +Y+ +F+ Sbjct: 1 MAERKTLAATVRGGTGKGAARSIRREGRIPGVIYGGGDAPEPITLDYRELNKLIYAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI +++ V+P+DYQLDPV +H DFL++ G+T+ V VP+ FIN + PG+ Sbjct: 61 TTIFDIEVEGAKQRVVPRDYQLDPVKGQPLHVDFLRLKPGATLKVSVPIHFINADICPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNIT 180 K+GG LN+V H + L PA+ +PD +T DL+ L+I +S+H+ I LPE S + + + T Sbjct: 121 KKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSAITLPEGCSLVATDRDFT 180 Query: 181 IATIVAP 187 IATIV P Sbjct: 181 IATIVPP 187 >gi|213967230|ref|ZP_03395379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] gi|301381034|ref|ZP_07229452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato Max13] gi|302060384|ref|ZP_07251925.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato K40] gi|302134874|ref|ZP_07260864.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928072|gb|EEB61618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato T1] Length = 203 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMPAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E I Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella silvestris BL2] gi|254801056|sp|B8EK41|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella silvestris BL2] Length = 227 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 74/187 (39%), Positives = 121/187 (64%), Gaps = 1/187 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A R GKG+AR +R+ G+IP +IYG +PI L ++++K +Y+ +F+ Sbjct: 1 MAETKTLAAAARHGTGKGAARSVRREGRIPGVIYGGGDPAEPITLDYRELNKLIYAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +D+ VIP+DYQLDP+ D+ +H DFL++ G+++ V VPV F+N+ PG+ Sbjct: 61 TTLFEIDVAGTKQRVIPRDYQLDPIKDLPLHVDFLRLKPGASLKVEVPVHFLNQETCPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNIT 180 K+GG +N+V H + L PA++IP++IT DL +L+I DS+H+ + LP+ + + T Sbjct: 121 KKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSLHLTALALPQGCRPTQRERDFT 180 Query: 181 IATIVAP 187 I TI P Sbjct: 181 IVTITPP 187 >gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium HTCC2083] gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium HTCC2083] Length = 218 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A +R GKG+AR R+ G +P II+G +DP PI + + K L + F Sbjct: 1 MAGEVPDFHAEVRTGTGKGAARQARRAGMVPGIIFGGDADPLPINVPFNVLLKALKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+L + + G + V VI +D Q V D+ H DF+++ + + + +PV FINE +P Sbjct: 61 KSTLLNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPVEFINEEAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L+ A +IP+ +TVD+ L +GD+I++ DI LP + Sbjct: 121 GIKRGGVLTTVRPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A + AP Sbjct: 181 VVANLSAPSG 190 >gi|330975570|gb|EGH75636.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 204 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAS 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE + Sbjct: 61 SHIIELNVGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + + Sbjct: 119 KKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|28868318|ref|NP_790937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|71153160|sp|Q888C7|RL25_PSESM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28851555|gb|AAO54632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas syringae pv. tomato str. DC3000] gi|331018128|gb|EGH98184.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 203 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +VI K Q P ++HADF++V G +T VPV FI E I Sbjct: 61 SHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEEAP--I 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VD++ L+IG +H+ D++ P+ + + Sbjct: 119 KKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + IA + AP Sbjct: 179 LAIANVHAPR 188 >gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae] Length = 202 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR+ GQ P I+YG + P IA+ + L + F ++IL Sbjct: 1 MKVIAFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+I ++ V+ +D+Q+ +++H DF +V + VP+ F+N SP +K G Sbjct: 61 DLEIEGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ V E+ + C N+P+ I VDL L +G SIH+ D++LP ++++Q N+TIAT Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA 180 Query: 185 VAPIS 189 P Sbjct: 181 TVPAG 185 >gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307] Length = 215 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K A +R GKG+AR R++G +P ++YG DP I + + KRL + F Sbjct: 1 MAGKIPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPIAINVPFNVLLKRLQAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + G + V VI ++ Q V D+ H DF+++ + + + + V FINE++ P Sbjct: 61 LSTLFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEDECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +K+GG L V +EV L+ A +IP+ +TVDL L++G++I + I+LP + + Sbjct: 121 ALKEGGVLIPVRNEVELIVTAGDIPEILTVDLTGLELGETITISSIKLPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP + Sbjct: 181 VIANLQAPAA 190 >gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12J] gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia pickettii 12D] gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] gi|226736355|sp|B2UER5|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12J] gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia pickettii 12D] gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA] Length = 208 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ PAIIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ ++ + +D+QL P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLHFLNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G +N + ++V + C ++P+ I VDL L+IG ++H+ D++LP+ + ++ N + Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIADLKLPKGVTILTHGGDENPAV 180 Query: 182 ATIVAPIS 189 A I P Sbjct: 181 ANISVPAG 188 >gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter cryohalolentis K5] gi|109893383|sp|Q1QED5|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5] Length = 224 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+AV R + GKG++R LRK +PAIIYG P I++ ++ K L + Sbjct: 1 MTINHFALNAVDRSAELQGKGASRRLRKQNLVPAIIYGGGEQPTAISIKINELVKSLEFE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILTL++ E V+ KD Q P +HADF +V +G + ++VPV F ++ Sbjct: 61 AFFSHILTLNVDGEEHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 PG K GG L+ + ++ ++C + +P+ + +D++ ++IGD + DI LPE Sbjct: 121 PGTKAGGVLSTLVTDIEIVCIPSQLPEYLEIDVSGMEIGDLFRLSDITLPEGVVIAELEL 180 Query: 174 MSQLNITIATIVAP 187 + TI + P Sbjct: 181 EDGHDRTIVNMQPP 194 >gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] gi|68053083|sp|Q60A15|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus capsulatus str. Bath] Length = 202 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R ++GKG++R LR G++PA++YG +P + L + K L ++ + + Sbjct: 4 SFVFEAELRHQLGKGASRRLRHAGKVPAVLYGGGGEPVSLLLDHHKVVKNLENEATYSHV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+ + I K Q P +++H DF +VS + VHVP+ FIN+ S G+K+G Sbjct: 64 LTIRFDGREENAILKAVQRHPAKPVVMHLDFQRVSAADKIRVHVPLHFINQESSVGVKKG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLNI 179 G ++ +V + C ++P+ I VDL + IG IH+ D++LP + ++ Sbjct: 124 GVVSHGMVDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSDLKLPAGVEIHALAQGVGHDL 183 Query: 180 TIATIVAPI 188 +A++ AP Sbjct: 184 PVASVHAPR 192 >gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter algicola DG893] Length = 217 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 109/197 (55%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +E + A R G+G++R LR+ +IPAIIYG + I++ ++ K L ++ Sbjct: 1 MS-QEFLIEAFPRGDQGRGASRRLRREERKIPAIIYGGKKEATAISIWHNELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ILT+++ + VI KD Q P +L HADFL+V + + V+VP+ F+NE +P Sbjct: 60 FFSHILTIELEGKKESVILKDLQRHPYKPLLTHADFLRVDKDHEIHVNVPLHFLNEESAP 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 IK QGG N +EV ++C N+P+ + VD+ +++ +H+ D++LP+ + Sbjct: 120 AIKLQGGVANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVHLSDLKLPKGVRIAALLQ 179 Query: 176 --QLNITIATIVAPISG 190 ++ + I P + Sbjct: 180 GEDHDLPVVAIHKPRAA 196 >gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25/general stress protein Ctc [Jannaschia sp. CCS1] gi|109893367|sp|Q28L99|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1] Length = 216 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P I+YG DP I + + KRL F Sbjct: 1 MAGEIPDLIAEARTGTGKGAARQARREGNVPGIVYGGGIDPLAINIPFNVLLKRLKDGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ + + G++ V VI ++ Q D V D+ H DF+++ S + + +PV I E + P Sbjct: 61 LSTLFNMKVEGQDDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPVEVIGEEECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L A +IP+ IT+DL L+IGD++ + + LP + + Sbjct: 121 GLKKGGVLTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAGAKATIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIANLTAPSG 190 >gi|90408736|ref|ZP_01216883.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] gi|90310153|gb|EAS38291.1| Ribosomal protein L25 [Psychromonas sp. CNPT3] Length = 205 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 5/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL A R +GKG++R LR +P I+YG DP + K++ K + F ++I Sbjct: 2 SIKLVAQTRTDLGKGASRRLRHAELVPGIVYGIGKDPISLTFEQKELRKIESVEAFYSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+I + V+ K Q + + H D L+V + +P+ FIN + + +K G Sbjct: 62 LDLEIDGTVEKVVLKALQRHAFKEQIQHLDLLRVDASHKLQTTIPLHFINADTNEALKAG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNI 179 G L + +EVS+ C ++P IT DL +L++G S+H+ D+ LP+ S+ ++ + Sbjct: 122 GVLTQIMNEVSISCLPTDLPAFITADLANLEMGTSLHISDLVLPKGVESVELIKGTEYDR 181 Query: 180 TIATIVAPI 188 +IA+I A Sbjct: 182 SIASISASK 190 >gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter sp. PRwf-1] gi|172048580|sp|A5WHA5|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1] Length = 224 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 111/194 (57%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + R GKG++R LRK +PAIIYG +P IA+ ++ K L ++ Sbjct: 1 MSDILYTVNGITRTNDQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKKNELWKLLENE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILT+++ E + KD Q P +HADF ++ +G + + +P+ F ++ Sbjct: 61 AFFSNILTINLEGEEHLAVIKDLQRHPSKGFAMHADFQRIVKGQKINMQIPLHFTGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS----M 174 PGIK GG L+ + ++ ++C +N+P+ + VD+++L+IG+S+H+ DI+LPE + Sbjct: 121 PGIKAGGILSTLVTDIEIVCLPSNLPEFLEVDVSNLEIGESLHLTDIKLPEGVVIFELDV 180 Query: 175 SQL-NITIATIVAP 187 + + T+ + AP Sbjct: 181 DEPVDRTVVNMQAP 194 >gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus metallidurans CH34] gi|166223709|sp|Q1LRQ2|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus metallidurans CH34] Length = 203 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G ++ + +++ + C ++P+ I VDL ++ +IH+ D++LP+ ++++ N IA Sbjct: 121 GIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SITLPAGA 188 >gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1] gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36] Length = 215 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI L + +L + F Sbjct: 1 MAGEIPDLEAFERTGTGKGAARQARRDGMVPGIVFGGDLDPLPINLDFNKLLTKLRAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + G+E V VI +D Q V D+ H D +++ + + + + V E SP Sbjct: 61 KATLFNLKVEGQEDVRVICRDVQRHVVKDLPTHVDLMRLKRTTKINLFIQVEVEGEEVSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L+ A +IPD IT+D+++L+IGDS+ + ++LP T + + Sbjct: 121 GLKKGGVLTLVRPEVELVVTAGDIPDHITIDVSELEIGDSLTISSVKLPNGTKPVIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIAQISAPSG 190 >gi|77460975|ref|YP_350482.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf0-1] gi|109893381|sp|Q3K6W3|RL25_PSEPF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77384978|gb|ABA76491.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1] Length = 200 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAELRSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G +VI K Q P ++HADF++V G +T VPV FINE + Sbjct: 61 SHVIELNVGGTKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEAAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL + +IG +H+ DI+ P+ + + Sbjct: 119 KKGGEISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDIKAPKGVEFVALAHGDD 178 Query: 179 ITIATIVAPI 188 +A + AP Sbjct: 179 KAVANVHAPR 188 >gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter sp. 1501(2011)] Length = 225 Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 111/194 (57%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + R GKG++R LRK +PAIIYG +P IA+ ++ K L ++ Sbjct: 1 MSDILYTVNGIARTDDQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKNNELWKLLENE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILT+++ E + KD Q P +HADF ++ +G + +++PV F+ ++ Sbjct: 61 AFFSNILTINLDGEEHLAVIKDLQRHPSKGFPMHADFQRIVKGQKINMNIPVHFVGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS----M 174 PGIK GG L+ + ++ ++C + +P+ + VD++ L+IG+S+H+ DI+LPE + Sbjct: 121 PGIKAGGILSTLVTDIEIVCLPSALPEYLEVDVSGLEIGESLHLTDIKLPEGVIIFELDV 180 Query: 175 SQL-NITIATIVAP 187 + + T+ + AP Sbjct: 181 DEPVDRTVVNMQAP 194 >gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc [Citromicrobium bathyomarinum JL354] Length = 226 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD+ GKG++R LR+ G++PA+IYG +P PI + +++ ++L + +FM +I+ Sbjct: 5 ITLPAETRDRAGKGASRALRREGRVPAVIYGGKEEPTPIHVEERELVRQLDTGHFMNSII 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++G + V +PKD L PV+D H DFL++++G+ V V VPV F++E +SPG+K+GG Sbjct: 65 ELEVGGKKVRTLPKDVALHPVTDRPEHVDFLRLTKGAKVDVSVPVVFVDEEESPGLKKGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 LNVV HE+ L+C A+ IP IT+ + ++GDSIH+ ++ LP+ + +++ + TIAT+ Sbjct: 125 VLNVVRHELELVCEADKIPGEITISVKGKEVGDSIHISEVDLPKGSESAITDRDFTIATL 184 Query: 185 VAPIS 189 VAP + Sbjct: 185 VAPSA 189 >gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|68053026|sp|Q5GTJ0|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 204 Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 3/193 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + R LRK G IPA++YG + + LSAK+ +K+ Sbjct: 1 MTQQEMITINAELRDVTKTKAIRSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQYKLGF 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI + + + +D Q V D + H DF V +GS + + +P+ F+NE+KSP Sbjct: 61 LSAHVIELDISGKKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP +I VDL+ IG S+H+ D++LP + + Sbjct: 121 GIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEE 180 Query: 178 NITIATIVAPISG 190 N T+ TI A SG Sbjct: 181 NFTVVTISAADSG 193 >gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus taiwanensis LMG 19424] gi|226736303|sp|B2AGT7|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus taiwanensis LMG 19424] Length = 205 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 107/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VD+ +++G ++H+ D++LP+ + ++ N IA Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSDLKLPKGVTVITHGDDNPAIA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SISQPAGA 188 >gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus indolifex HEL-45] Length = 218 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R GKG+AR R++G +P I++G ++P PI + + RL F Sbjct: 1 MAGEIPDLEAQVRTGTGKGAARQARRDGMVPGIVFGGDNEPLPINIPFNKLLTRLRQGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T+ L + G + V VI +D Q V D+ H D +++ + + + + V E + P Sbjct: 61 KATLFNLKVEGHDDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKINLFINVEVKGEEECP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L +V EV L+ A +IP+ +TVD+ L+IGDS + + LPE + Sbjct: 121 GLKKGGVLTLVRPEVELVVTAADIPEFVTVDVTGLEIGDSATISRVDLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IAT+ AP Sbjct: 181 VIATVSAPAG 190 >gi|70732481|ref|YP_262244.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens Pf-5] gi|109893379|sp|Q4K689|RL25_PSEF5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68346780|gb|AAY94386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas fluorescens Pf-5] Length = 199 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ +PA++YG P+ I++ AK+++K L ++ Sbjct: 1 MNDFTLNAEVRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + I+ L++G +V+ K Q P ++HADF++V G +T VPV FINE + Sbjct: 61 SHIIELNVGGTKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEAAP--V 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLN 178 K+GG+++ V E+ + C ++P+ I VDL D +IG +H+ DI+ P+ + + Sbjct: 119 KKGGEISHVIAEIEVSCLPKDLPEFIEVDLADAEIGTIVHLSDIKAPKGVEFVALAHGND 178 Query: 179 ITIATIVAPI 188 + +A + AP Sbjct: 179 LAVANVHAPR 188 >gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas fluorescens SBW25] gi|259646693|sp|C3KCS0|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens SBW25] Length = 200 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR IPA++YG + + + +K+I+K ++ + Sbjct: 1 MNDFTLNAQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILSKEIAKLFENEAAYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +VI K Q P ++HADF++V G +T VPV F+ E+ +K Sbjct: 61 HVIELNVDGTKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVGEDAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG ++ E+ + C ++P+ I VDL+ +IG IH+ D++ P+ + + Sbjct: 119 KGGVVSHTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPKGVEFVALAHNDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503] Length = 212 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 R + G G +R +R++G +PA++YG +P I L + K + + + + Sbjct: 8 DCERRQRAGTGGSRAVRRDGWVPAVLYGGDEEPLNIKLRYNQVLKAYQTGRLIDVLAKIK 67 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 + VI +D Q+DPV D+ H D ++V + VTV+VP+RF+NE PG+K+GG LN Sbjct: 68 LEGGEQQVIGRDIQVDPVKDLPRHVDLMRVDARTKVTVNVPMRFLNEETCPGLKKGGVLN 127 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIVAP 187 +V HEV ++ A NIP+++ DL +GD+IH+ ++LP+ + +++ + T+ATI AP Sbjct: 128 IVRHEVEVVASATNIPEALEADLAGADVGDTIHISAVKLPDGVTPTITDRDFTVATIAAP 187 Query: 188 IS 189 + Sbjct: 188 SA 189 >gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodospirillum rubrum ATCC 11170] gi|109893389|sp|Q2RMV5|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170] Length = 210 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + LSA RD+ GKG+AR R+ GQ+PA+IYG DP ++L+ + I + F Sbjct: 1 MSDIGTLSAKGRDRAGKGAARATRREGQVPAVIYGGRQDPVLLSLAPRLIHTEMRKAGFS 60 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L + G E V+ +D Q PV+D+ IH DFL++ + + VTV +PV FINE SPG Sbjct: 61 SRLFDLTVEGGETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAIPVHFINETASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 +K+GG LNVV HE+ + + +PD VDL ++GDSIH+ +++PE +++ + Sbjct: 121 LKRGGVLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIPEGVRPVIAERDF 180 Query: 180 TIATIVAPIS 189 TI TI AP Sbjct: 181 TICTIAAPSG 190 >gi|119897045|ref|YP_932258.1| 50S ribosomal protein L25/general stress protein Ctc [Azoarcus sp. BH72] gi|166223661|sp|A1K3G6|RL25_AZOSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119669458|emb|CAL93371.1| 50S ribosomal protein L25 [Azoarcus sp. BH72] Length = 200 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +A R+ G ++R LR+ Q+P IIYG D +PI L ++ L + F ++ Sbjct: 2 TIEFNATKREGQGSSASRRLRRAAQVPGIIYGAGKDAQPITLDHNELYHLLKKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 L++++ V+ +D Q ++H DF +V + + VP+ F+N + +P +K Sbjct: 62 LSINVEGAKETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFVNGDNAPAVKLG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 G + V E+ + C +++P+ I VDL L+ G SIH+ ++LP ++ + + + Sbjct: 122 GNIIAHVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKLPAGVEAVHHGEGDPVV 181 Query: 182 AT 183 A+ Sbjct: 182 AS 183 >gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter arcticus 273-4] gi|109893382|sp|Q4FVB4|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4] Length = 224 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+AV R + GKG++R LRK +PAIIYG P I++ ++ K L + Sbjct: 1 MTINHFALNAVDRSAEVQGKGASRRLRKQNLVPAIIYGGGEQPIAISIKINELVKSLEFE 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + ILTL++ E V+ KD Q P +HADF +V +G + ++VPV F ++ Sbjct: 61 AFFSHILTLNVDGEEHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEA 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 PG K GG L+ + ++ ++C + +P+ + +D++ ++IGD + DI+LPE Sbjct: 121 PGTKAGGILSTLVTDIEIVCIPSQLPEYLEIDVSGMEIGDLFRLSDIKLPEGVIIFDLDM 180 Query: 175 -SQLNITIATIVAP 187 + TI + P Sbjct: 181 EDAHDRTIVNMQPP 194 >gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha H16] gi|122947171|sp|Q0KEP9|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16] Length = 205 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 ELEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VDL +++ ++H+ DI+LP+ + ++ N +A Sbjct: 121 GIVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSDIKLPKGVTVITHGDDNPAVA 180 Query: 183 TIVAPISG 190 +I P Sbjct: 181 SISQPAGA 188 >gi|315127047|ref|YP_004069050.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] gi|315015561|gb|ADT68899.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913] Length = 204 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F Sbjct: 1 MSNTTYTYDAELRVETGTGASRRLRREDKVPAILYGADKEAVSLTFAHKDMIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++G E V I KD Q P L H DF +V + VP+ FI E K Sbjct: 61 YTHILTLNVGGEKVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGEEKVTK 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 + EV + C ++P+ I VD++DL GDSIH+ D+ P+ S+ Sbjct: 121 LGATVV--HQLTEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSVELGKGE 178 Query: 176 QLNITIATIVAPISG 190 + +I TI A + Sbjct: 179 GHDQSIVTIKANKAA 193 >gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13] Length = 229 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 111/190 (58%), Gaps = 5/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++A RD G G++R LR+NG++P I+YGN D I L +K + ++ + + F Sbjct: 1 MK-ITVTAEKRDVKGTGASRRLRRNGKVPGILYGNHKDAVSIVLDSKTLHQQFHKEAFHA 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +IL L V+ +DYQL+PV ++H DF +V++ + V+VP FINE+ + G+K Sbjct: 60 SILELSTDGTKESVLLRDYQLEPVKGTILHVDFQRVNQNEKIHVNVPFHFINEDIAKGVK 119 Query: 123 -QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLN 178 +GG ++ + EV + C ++P I VDL DL +G+S+H+ ++ LPE + + + Sbjct: 120 LEGGVISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVHLSELNLPEGVELTALTEEND 179 Query: 179 ITIATIVAPI 188 I +IV P Sbjct: 180 PAITSIVKPK 189 >gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium sp. 4-46] gi|226736339|sp|B0UGY1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium sp. 4-46] Length = 217 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 77/187 (41%), Positives = 116/187 (62%), Gaps = 2/187 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L AV RD+VGKG+AR +R+ G++PA+IYG P+ I+L A +Y F+ Sbjct: 1 MSAVKPLEAVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +T+ + + + IP+DYQLDPV D +H DFL+V G T+ V VPV F+N++ +PG+ Sbjct: 61 STVFEIAVDGRTIRAIPRDYQLDPVKDTPLHVDFLRVVSGQTIEVEVPVHFVNQDAAPGL 120 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ G LNVV H ++L + IPD++ VDL IGD++H+ D+ LP S + T Sbjct: 121 KQKSGTLNVVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSDLVLPTGASLALAPSET 180 Query: 181 IATIVAP 187 +AT+V P Sbjct: 181 VATLVPP 187 >gi|116052816|ref|YP_793133.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa UCBPP-PA14] gi|296391492|ref|ZP_06880967.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAb1] gi|313107333|ref|ZP_07793528.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] gi|122257173|sp|Q02G03|RL25_PSEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115588037|gb|ABJ14052.1| putative ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14] gi|310880030|gb|EFQ38624.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016] Length = 204 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 108/191 (56%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ Sbjct: 1 MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+ Sbjct: 61 SHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + Sbjct: 121 KQSGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGN 180 Query: 178 NITIATIVAPI 188 ++ +A I A Sbjct: 181 DLAVANIHASR 191 >gi|332993707|gb|AEF03762.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas sp. SN2] Length = 210 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 7/197 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R +GKG++R LR+ ++P IIYG P I L ++ + F Sbjct: 1 MSKAIFTLDATVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNAADFEAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +LTL++ + V V+ KD Q ++H DF +V G + +VP+ FINE+KS Sbjct: 61 YSHVLTLNVDGKAVEVLVKDMQRHAFKPRILHVDFQRVIAGQELHTNVPLHFINEDKSAA 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 IK GG +E+ + C ++P+ I VD+ ++++ ++H+ D+ LP +S+ Sbjct: 121 IKAGGIAEHHVNEIEITCLPKDLPEFIEVDIANVEMDSTLHLSDLTLPAGITSVELGKDD 180 Query: 175 SQLNITIATIV-APISG 190 ++ + T+ AP + Sbjct: 181 ETHDLAVVTVKPAPKAA 197 >gi|49089156|gb|AAT51649.1| PA4671 [synthetic construct] Length = 205 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 108/191 (56%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ Sbjct: 1 MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+ Sbjct: 61 SHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + Sbjct: 121 KQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGN 180 Query: 178 NITIATIVAPI 188 ++ +A I A Sbjct: 181 DLAVANIHASR 191 >gi|15599866|ref|NP_253360.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PAO1] gi|107099662|ref|ZP_01363580.1| hypothetical protein PaerPA_01000680 [Pseudomonas aeruginosa PACS2] gi|218893768|ref|YP_002442637.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa LESB58] gi|254238589|ref|ZP_04931912.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|254244437|ref|ZP_04937759.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|71153159|sp|Q9HVC4|RL25_PSEAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736352|sp|B7V0L7|RL25_PSEA8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9950927|gb|AAG08058.1|AE004881_1 probable ribosomal protein L25 [Pseudomonas aeruginosa PAO1] gi|126170520|gb|EAZ56031.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719] gi|126197815|gb|EAZ61878.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192] gi|218773996|emb|CAW29811.1| probable ribosomal protein L25 [Pseudomonas aeruginosa LESB58] Length = 204 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 108/191 (56%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ G +PA++YG +P+ + L ++I+K L ++ Sbjct: 1 MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G V+ K Q P ++HADFL+V +T HVP+ FINE + G+ Sbjct: 61 SHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + Sbjct: 121 KQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGN 180 Query: 178 NITIATIVAPI 188 ++ +A I A Sbjct: 181 DLAVANIHASR 191 >gi|167031780|ref|YP_001667011.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida GB-1] gi|189042366|sp|B0KND5|RL25_PSEPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166858268|gb|ABY96675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida GB-1] Length = 197 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 104/189 (55%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR IPA++YG + + + + AK+I+K ++ + Sbjct: 1 MTDFILNAQARTDLGKGASRRLRHAASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +V+ K Q P ++HADF++V G +T VPV FI E +K Sbjct: 61 HVIELNVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFIGEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL + ++G IH+ D++ P+ + + Sbjct: 119 KGGEISHVVSEIEVSCEAKDLPEFIEVDLANAEVGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|58583225|ref|YP_202241.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625061|ref|YP_452433.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|68053027|sp|Q5GWR5|RL25_XANOR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893406|sp|Q2NZW8|RL25_XANOM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58427819|gb|AAW76856.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369001|dbj|BAE70159.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 211 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 6/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDIQRHPFKQLIMHIDFQRVSANQKLSAAVPLHFINEEASPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGK 180 Query: 176 QLNITIA 182 + ++ + Sbjct: 181 ERDVAVV 187 >gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine bacterium HP15] Length = 223 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 110/197 (55%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +E + A RD G+G++R LR+ +IPAIIYG D PIA+ ++ K L ++ Sbjct: 8 MS-QEFVIEAFPRDDQGRGASRRLRREERKIPAIIYGGNKDATPIAIWHNELKKALENEA 66 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LT+++ + VI KD Q P IL HADFL+V + + V+VP+ FINE+ +P Sbjct: 67 FFSHVLTVELNGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAP 126 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 IK GG N +EV ++C N+P+ I VD+ +++ +H+ D++LP+ + Sbjct: 127 AIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTTVEMDQVVHLSDLKLPKDVKIAALLQ 186 Query: 176 --QLNITIATIVAPISG 190 ++ + I P Sbjct: 187 GEDHDLPVVAIHKPRGA 203 >gi|312797356|ref|YP_004030278.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454] Length = 205 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ P I+YG ++PK I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNAGKTPGIVYGAGTEPKLIELDHNALYHALNKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I V+ +D Q P +++H DF +V + +TV VP+ ++N+ SP +K G Sbjct: 61 DLEIAGATEQVLLRDVQYHPFRRLVLHVDFQRVDAKTKITVKVPLHYMNQEGSPAVKLGG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNITI 181 G + V +E+ + C N+P+ I VDL + ++ S+H +D++LP + Q N I Sbjct: 121 GVITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKDVKLPAGVELTPHVEQENPVI 180 Query: 182 ATIVAPISG 190 + P Sbjct: 181 VSATLPAGA 189 >gi|148546001|ref|YP_001266103.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida F1] gi|166223707|sp|A5VYF9|RL25_PSEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148510059|gb|ABQ76919.1| LSU ribosomal protein L25P [Pseudomonas putida F1] gi|313497087|gb|ADR58453.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1] Length = 197 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 106/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + Sbjct: 1 MTDFILNAQARTDLGKGASRRLRHSLSIPAVVYGGDKEAQSLTILAKEITKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +VI K Q P ++HADF++V G +T VPV FINE +K Sbjct: 61 HVIELNVDGVKQNVIIKAMQRHPAKQFIMHADFVRVVAGQKLTAKVPVHFINEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 119 KGGEISHVESEIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|104780084|ref|YP_606582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas entomophila L48] gi|166223705|sp|Q1IEY7|RL25_PSEE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|95109071|emb|CAK13767.1| 50S ribosomal subunit protein L25 (General stress protein CTC) [Pseudomonas entomophila L48] Length = 198 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 105/189 (55%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + Sbjct: 1 MTDFILNAQARTDLGKGASRRLRHSANIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +V+ K Q P ++HADF++V G +T VPV F+ E IK Sbjct: 61 HVIELNVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFVGEEAP--IK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V E+ + C A ++P+ I VDL+ ++G IH+ D++ P+ + + Sbjct: 119 KGGEISHVVSEIEVSCEAKDLPEFIEVDLSKAEVGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|197106324|ref|YP_002131701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] gi|226736347|sp|B4R8Q7|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phenylobacterium zucineum HLK1] Length = 208 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 105/182 (57%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +R++ G G AR R++G +P ++YG DP IA+ A + K LY+ + Sbjct: 1 MAEIVLNVEVRERTGTGGARDTRRSGMVPGVLYGGDKDPVAIAVRANEFRKALYTGKLLG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G E VI K + PV+D H D +V E + + VPV F N++ SPG+K Sbjct: 61 HLVTLKYGNETQPVIAKAVDMHPVTDEPQHFDLYRVDEHQQIKIEVPVHFTNQDDSPGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG LNV H +++ CPA++IP+ I DL L+IG +I + D++LP K + +A Sbjct: 121 RGGTLNVALHTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKLPAKAEAAVDGETVVA 180 Query: 183 TI 184 ++ Sbjct: 181 SV 182 >gi|332532472|ref|ZP_08408350.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] gi|332038115|gb|EGI74562.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505] Length = 203 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R + G G++R LR+ ++PAI+YG + + + KD+ K + F Sbjct: 1 MSNKTYTYNAELRVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL++ E V VI KD Q P L H DF +V VP+ FI E Sbjct: 61 YTHILTLNVDGEAVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEEIV-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 K G + EV + C +P+ I VD++ +GDS+H+ D+ P+ SS+ Sbjct: 119 TKAGATVVHQLTEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSVDLAKGE 178 Query: 176 QLNITIATIVAPISG 190 + +I TI A + Sbjct: 179 GHDQSILTIKANKAA 193 >gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria pomeroyi DSS-3] gi|68053037|sp|Q5LV90|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3] Length = 207 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A+ R GKG+AR R++G +P I++G ++P PI + + K L + F Sbjct: 1 MAGEIPDLVALERTGTGKGAARQARRDGMVPGIVFGGDNEPLPIQIPFNRLLKMLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G E V VI +D Q D V D+ H D +++ S + + + V F+N +P Sbjct: 61 KSTLFNLKVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVDFVNHAAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IP+SITVDL L IGD + + + LP + + Sbjct: 121 GLKKGGVLTVVRPEVELEVTAGDIPESITVDLTGLNIGDVVTISSVTLPAGAKPTVERDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|71279934|ref|YP_270232.1| 50S ribosomal protein L25/general stress protein Ctc [Colwellia psychrerythraea 34H] gi|109893355|sp|Q47Y88|RL25_COLP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71145674|gb|AAZ26147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Colwellia psychrerythraea 34H] Length = 211 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 7/190 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A +R +GKG++R LR ++PAI+YG +P + L K++ + + F + +L Sbjct: 5 LTLEAEVRTDLGKGASRRLRHANKVPAILYGENEEPISLTLEHKNVFRAQQEEAFYSQVL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL+I + V + KD Q P +++H DFL++ V + P+ F+NE+++ Sbjct: 65 TLNIAGKPVECLIKDMQRHPFKQVVMHLDFLRIDAKHAVHANAPIHFLNEDEAAKTGAN- 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNIT 180 ++ +E+++ C ++P+ I++DL L++G +IH+ D+ P +S ++ Sbjct: 124 -ISHHMNEIAITCLPKDLPEFISIDLAGLELGQTIHLSDVTFPAGVTSDELAKGEDHDLA 182 Query: 181 IATIVAPISG 190 + + AP + Sbjct: 183 VVSANAPKAA 192 >gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas europaea ATCC 19718] gi|71153155|sp|Q82TQ5|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718] Length = 198 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 105/191 (54%), Gaps = 4/191 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + ++SA R G G+ R LR G++P +IYG D + I L KD+ +L + F +I Sbjct: 2 QIEISANSRKLHGTGANRRLRSQGRLPGVIYGGNGDAQSIELDHKDLYYKLKMEAFHASI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L++ I + V+ +D Q+ P ++H DF +V + + V VP+ FIN + +PG+K Sbjct: 62 LSISIDGKKEQVLLRDVQMHPFKQQVLHIDFQRVRQDQKIHVKVPLHFINADIAPGVKLS 121 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNIT 180 G ++ V E+ + C ++P+ ITVDL+ + G ++H+ D+ L E + N+ Sbjct: 122 GGMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSDLILSENVEIPALLKGDNLP 181 Query: 181 IATIVAPISGS 191 +AT++A + Sbjct: 182 VATLIAKRGEA 192 >gi|77164043|ref|YP_342568.1| ribosomal protein L25 [Nitrosococcus oceani ATCC 19707] gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] gi|109893372|sp|Q3JDQ8|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707] gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27] Length = 214 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 108/197 (54%), Gaps = 8/197 (4%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + +L A +R + GKG++R LR+ G++PA++YG +P + + + L F Sbjct: 1 MENLFELHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+ + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG Sbjct: 61 SHILTIHANGKAERVVLKALQRDPVNPNKVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPG 120 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 +KQ G + + +++ + C A ++P+ I VDL DL +G+++H+ D++LP + Sbjct: 121 VKQEGGTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEIPALKLG 180 Query: 176 -QLNITIATIVAPISGS 191 + + TI P + + Sbjct: 181 EDYDQPVVTIHKPRAAA 197 >gi|126727672|ref|ZP_01743504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] gi|126703088|gb|EBA02189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacterales bacterium HTCC2150] Length = 217 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 2/193 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L+ +R GKG+AR R++G +P +YG DP I + + KRL + F Sbjct: 1 MAGKIPDLNVSVRTGTGKGAARQSRRDGNVPGTVYGGGQDPIAIEIPFNALFKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I G+E V V+ +D Q D V D+ IH D +++ S V + + V FIN +SP Sbjct: 61 LATLFNLKIEGQEDVRVVCRDVQRDKVKDLPIHLDLMRLRRDSRVAMSITVEFINHEESP 120 Query: 120 GI-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ QGG LN V EV L A++IPD ITVDL L +G +I + DI LP+ + + Sbjct: 121 GLANQGGSLNTVRPEVELSVIASDIPDHITVDLAGLNVGATISISDIDLPKGAEPTIERD 180 Query: 179 ITIATIVAPISGS 191 IATI AP S Sbjct: 181 FIIATIAAPGGAS 193 >gi|170723623|ref|YP_001751311.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas putida W619] gi|226736353|sp|B1JEQ2|RL25_PSEPW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169761626|gb|ACA74942.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas putida W619] Length = 198 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 107/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A +R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + Sbjct: 1 MTDFTLNAQVRSDLGKGASRRLRHSLNIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +V+ K Q P ++HADF++V G +T VPV FINE +K Sbjct: 61 HVIELNVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 119 KGGEISHVESQIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma proteobacterium HTCC2143] Length = 216 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 112/193 (58%), Gaps = 7/193 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E L+A R +GKG++R LR+ ++ I+YG + P P+ + +I K ++ F T+ Sbjct: 4 EFMLNAETRKDLGKGASRRLRRLENKVLGIVYGGKNKPTPVTFAMNEIVKLAENEAFFTS 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK- 122 ++ L++ + V+ KD Q P + ++H DFL+VS + +T+ VP F NE+ G+K Sbjct: 64 LVDLNLDGKSEQVVIKDMQRHPARETIMHVDFLRVSAKTKITMQVPFHFTNEDTCHGVKI 123 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QL 177 +GG ++ +++ + C ++P+ I VD+ LK+GD++H+ D+ LP+ S++ Sbjct: 124 EGGSVSHALNDIEITCLPKDLPEYIEVDMAALKVGDNVHLSDLVLPKGVESVALAHGEDH 183 Query: 178 NITIATIVAPISG 190 ++ ++ + AP G Sbjct: 184 DLLVSAVNAPRGG 196 >gi|257094305|ref|YP_003167946.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046829|gb|ACV36017.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 203 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R G G++R LR+ ++PAI+YG + P I L +I L + F ++ Sbjct: 2 TFELHARKRTLQGSGASRRLRREKRVPAIVYGGSAAPLLIDLDHNEILLNLRKEAFHASV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 LTL++ V+ +D Q P +++H DF +V + VP+ F+N + +PG+K Sbjct: 62 LTLNVDGATQSVVLRDSQRHPWKPLVLHCDFQRVDTTHAIHQRVPLHFVNADIAPGVKIG 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITI 181 GG + + +++ + C ++P I VDL +L+ G ++H+ ++ P ++ + + Sbjct: 122 GGNVAHILNDIEVTCLPQDLPAYIEVDLKNLESGHALHVSELVFPAGVKPVTHGDEDPVV 181 Query: 182 ATIVAPISGS 191 A+I A G+ Sbjct: 182 ASIPARKGGA 191 >gi|307728381|ref|YP_003905605.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] gi|307582916|gb|ADN56314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1003] Length = 205 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQETNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ N + Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVEAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|325277193|ref|ZP_08142836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] gi|324097679|gb|EGB95882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas sp. TJI-51] Length = 199 Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 106/189 (56%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R +GKG++R LR + IPA++YG + + + + AK+I+K ++ + Sbjct: 1 MTDFILNAQARTDLGKGASRRLRHSASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ +V+ K Q P ++HADF++V G +T VPV FINE +K Sbjct: 61 HVIELNVDGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEEAP--VK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ V ++ + C A ++P+ I VDL + +IG IH+ D++ P+ + + Sbjct: 119 KGGEVSHVESQIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDK 178 Query: 180 TIATIVAPI 188 +A + AP Sbjct: 179 AVANVHAPR 187 >gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter sp. SW2] Length = 203 Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LS +R GKG+AR R+ G +P I+YG+ +P+ I + + KRL + F Sbjct: 1 MTGKIPDLSVEVRMGTGKGAARQARREGYVPGIVYGDGKEPQAINVKYYTLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ L I G++ V VI + Q D V D+ H DF+++ + S V + + V FIN SP Sbjct: 61 LQTLFNLKIEGQDDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHVTFINHEASP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L A +IPD ITVDL IGD IH++D+ LPE + N Sbjct: 121 GLKRGGALVVVRPEVELEVTAGDIPDHITVDLAGRNIGDVIHIQDVVLPEGAAPTIDRNF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b] Length = 220 Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR +R+ +P I++G DP PI + + K+L F Sbjct: 5 MAGEIPDLHAQERTGTGKGAARAVRRAHMVPGIVFGGDVDPLPIQIPYNVLIKKLKEGRF 64 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G + V VI +D Q D V D+ H D +++ + + + +PV F E+ +P Sbjct: 65 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPVTFTGEDVAP 124 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV +E+ L+ A +IP+ +TVDL+ + IGD++ + + LPE + + Sbjct: 125 GLKKGGVLTVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQVTLPEGAQTTIDRDF 184 Query: 180 TIATIVAPIS 189 I I AP + Sbjct: 185 VICNISAPSA 194 >gi|190572919|ref|YP_001970764.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia K279a] gi|190010841|emb|CAQ44450.1| putative 50S ribosomal protein L25 [Stenotrophomonas maltophilia K279a] Length = 205 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP- 119 +IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ F+NE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPA 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G + EV++ C ++P+SI VDL +LK GD +++ DI+LP+ + Sbjct: 120 GKAADVVVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSDIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|170691505|ref|ZP_02882670.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] gi|170143710|gb|EDT11873.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia graminis C4D1M] Length = 205 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++G + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQESNPAVKLAS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP S ++ N + Sbjct: 121 AVISHVINEIEVECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|166710809|ref|ZP_02242016.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzicola BLS256] Length = 211 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 6/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ A R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE+ SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEDASPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGK 180 Query: 176 QLNITIA 182 + ++ + Sbjct: 181 ERDVAVV 187 >gi|194364505|ref|YP_002027115.1| 50S ribosomal protein L25/general stress protein Ctc [Stenotrophomonas maltophilia R551-3] gi|194347309|gb|ACF50432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stenotrophomonas maltophilia R551-3] Length = 206 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P ++L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAVSLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP- 119 +IL L++ ++ V+ +D Q P +++H DFL+V+E +T VP+ FINE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFLRVNENEKLTASVPLHFINEDTSPA 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G + EVS+ C ++P+SI VDL +LK GD +++ DI+LP+ + Sbjct: 120 GKAADVVVAHELKEVSISCLPKDLPESIEVDLGELKAGDIVYLSDIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis L13] Length = 197 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 117/190 (61%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A R+ +G G AR R++G +P ++YG+ + K I++ + I+K LY F Sbjct: 1 MS-SVVTIEAQPREALGTGGARATRRDGLVPGVVYGHNKENKFISIDPRSIAKELYKPGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L + HV+ KD QL PVSD +H DF++VS+ S + V++PV IN++K+PG Sbjct: 60 FSRLFALSVNGNTEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPVHVINDDKAPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 +K+GG +N+V H + ++CPA++IP I VDL + G ++H+ DI+LP + + + Sbjct: 120 VKKGGMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQLPAGVVAAHPERDN 179 Query: 180 TIATIVAPIS 189 T+ +IVAP Sbjct: 180 TLVSIVAPAG 189 >gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC) rplY [Thiomonas sp. 3As] gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas intermedia K12] Length = 205 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR+ G+ P IIYG P+ I L + L + F +++L Sbjct: 1 MKVVAFERSLQGTGASRRLRRAGKTPGIIYGGEQAPQMIELDHNALYHALKKEQFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L+I + V+ +DYQ+ P +++H DF +V G +++ VP+ F SP +K Sbjct: 61 QLEIAGKSSQVLLRDYQMHPFKQLVLHVDFQRVDAGHKISMKVPLHFTGAENSPAVKLSH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 G +N V EV + C + +P+ I VDL++L + S+H+ D++LP+ S ++ N + Sbjct: 121 GLVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVNDLKLPKGVSVLTHGVDNPAVV 180 Query: 183 TIVAP 187 T+ P Sbjct: 181 TVSPP 185 >gi|325524744|gb|EGD02726.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. TJI49] Length = 201 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEISPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ + + N + Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLTAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter sp. K31] gi|189042349|sp|B0T899|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter sp. K31] Length = 199 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 102/187 (54%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +RD+ G G +R R+ G++P ++YG P IA+ + K L++ + Sbjct: 1 MAEIILNVEIRDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G E VI K Q PV+D +H D +V E + + +PV F N + S G+K Sbjct: 61 HLVTLQHGDEKQSVIAKAVQFHPVTDEPLHFDLYRVDEHQLIKIEIPVHFKNHDISVGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L ++ H V L CPA+ IP+ + +DL IGD+I + +I+LPE + + IA Sbjct: 121 KGGTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIKLPEGVRPAMERDFVIA 180 Query: 183 TIVAPIS 189 + A + Sbjct: 181 NLKASAA 187 >gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2] Length = 226 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A R GKG++R LR GQ+PAI+YG +DP I L + S+ F Sbjct: 1 MSEHKITATSRKDEGKGASRRLRHAGQVPAIVYGGHADPVSIQLEHERTWLVSQSEWFYA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GI 121 +IL L+I + V+ +D Q P ++H DF +VS + V VP+ F+N +KSP G Sbjct: 61 SILDLEIDGKSEKVLLRDMQRHPYKQRIMHMDFQRVSANEAIRVSVPLHFLNVDKSPAGK 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLN 178 G + ++ + C ++P+ I +DL++L+ GD++H+ ++LP+ + Sbjct: 121 TAGVVVMHELTQIEVSCLPGDLPEFIDIDLSNLQAGDTMHLSQVQLPKGVEVPELRLGAD 180 Query: 179 ITIATIVA 186 +A +VA Sbjct: 181 HDVAVVVA 188 >gi|190571325|ref|YP_001975683.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226694585|sp|B3CMB8|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 203 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD K + + LR+ G IPA+IYG D + LSAK+ +K+ S Sbjct: 1 MAQQEMVTINAELRDVKKKKAMQALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ LDI + + + +D Q V D + H DF V +GS + + +P+ FINE+KSP Sbjct: 61 LSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINESKSP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C IP I +DL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomicrobium denitrificans ATCC 51888] Length = 242 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L A R + GKG+AR R++G +PA+IYGN P+ I L ++ K++ +F Sbjct: 1 MSELITLKATARPRAGKGAARQARRDGNVPAVIYGNQETPETINLEYNELWKQVLRGHFT 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +T + LD+ V+ +D Q+DP+ D +H DF +V + + V +P+ F+NE SPG+ Sbjct: 61 STAIELDVEGTKHIVLARDVQVDPIRDTPLHVDFQRVGKDGVIRVSIPMHFVNETLSPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNIT 180 K+GG LN+V H+V + P + IP ++L L+IG SIH+ + +PE + + + T Sbjct: 121 KRGGVLNIVRHDVEVFAPYDKIPRFFEINLEGLEIGRSIHISAVNMPEGVTPVIKNRDFT 180 Query: 181 IATIV 185 IATI Sbjct: 181 IATIA 185 >gi|330722355|gb|EGH00211.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047] Length = 225 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 11/198 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M E L+A RD +GKGS+R LR+ G IPAI+YG P+ I L+ KDI K ++ Sbjct: 1 MSN-EFSLNAQARDVLGKGSSRRLRRLEGNIPAIVYGGDKAPQNITLAHKDIIKAADNEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F I+ L+I VI KD Q P +++H DFL+V + + V VP+ FINE++ Sbjct: 60 FFAHIIDLNIDGNGESVIVKDMQRPPAKPVIMHVDFLRVRKDVAINVSVPLHFINEDECK 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 GIK QGG ++ EV + C ++P+SI VD+ ++++ +H+ D+ LP+ + Sbjct: 120 GIKLQGGVVSHNLTEVEISCLPGDLPESIDVDMANVEVDQIVHLSDLALPKGVTLAAFSH 179 Query: 175 ----SQLNITIATIVAPI 188 + ++ +A I AP Sbjct: 180 GGDEHEHDLPVAAIHAPK 197 >gi|307544466|ref|YP_003896945.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] gi|307216490|emb|CBV41760.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581] Length = 217 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 111/193 (57%), Gaps = 7/193 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R+ +GKG++R LR+ Q+PAIIYG P+ IA+ K + + F Sbjct: 1 MSDYILTASVRNDLGKGASRRLRRANEQVPAIIYGGDKAPEAIAVDKTHFYKSIEEEAFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++++T+++ + V+ +D Q P ++ HADF+++ +T+ VP+ +NE GI Sbjct: 61 SSVITIEVEGKPQQVVVRDLQRHPYKPLVTHADFMRIDATHEITMRVPLHVVNEESCKGI 120 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 +GG+L+V+ +EV + C ++PD + +D+ ++ +G ++H+ D++LP + ++ Sbjct: 121 KDEGGELHVLSNEVEVSCLPKDLPDYLEIDIAEVTLGTTLHLSDLKLPAGVTLVALTHGE 180 Query: 176 QLNITIATIVAPI 188 + + ++ P Sbjct: 181 DHDNAVLSVTQPK 193 >gi|289663466|ref|ZP_06485047.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667603|ref|ZP_06488678.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 210 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEAASPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QL 177 + +EV ++C ++P+ I VDL L++GD IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGDVIHLSEIKLPAGVEIPELKLGK 180 Query: 178 NITIATIVA 186 +A + A Sbjct: 181 EHDVAVVAA 189 >gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 203 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +R+ + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRNVTKTKAVHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|323524671|ref|YP_004226824.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] gi|323381673|gb|ADX53764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1001] Length = 205 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+IG + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVEAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|167585421|ref|ZP_02377809.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ubonensis Bu] Length = 201 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGASQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + +DL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AIISHVATEIEVECLPADLPEFLEIDLSKIEAGQSLHAKDIVLPKGVALIAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASAALPAGA 189 >gi|206559196|ref|YP_002229956.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia J2315] gi|198035233|emb|CAR51107.1| ribosomal L25p family protein [Burkholderia cenocepacia J2315] Length = 205 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP + Sbjct: 61 SSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP+ + ++ Sbjct: 121 KLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLVAHVDAE 180 Query: 178 NITIATIVAPISG 190 N +A+ P Sbjct: 181 NPVVASATVPAGA 193 >gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia eutropha JMP134] gi|109893384|sp|Q476G0|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134] Length = 203 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 108/185 (58%), Gaps = 3/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P IIYG +DPK I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAADPKMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 L++ + + + +Q+ P +++H DF +VS + V VP+ F+N+ +PG+K G Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 G +N + +++ + C ++P+ I VD+ ++++G ++H+ D++LP+ + ++ N IA Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTDLKLPKGVTVVTHGDENPAIA 180 Query: 183 TIVAP 187 +I P Sbjct: 181 SISLP 185 >gi|292493880|ref|YP_003529319.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] gi|291582475|gb|ADE16932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus halophilus Nc4] Length = 211 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 106/194 (54%), Gaps = 8/194 (4%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + +L A +R + GKG++R LR+ G++PAI+YG +P + L + + L + F Sbjct: 1 MENLFELHADVRGEQGKGASRRLRRAGKVPAILYGAGKEPVSLTLDHNLLFQHLGYEAFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+ + + K Q DP + + ++H D +VS +++ V + F+ ++ + G Sbjct: 61 SHILTIHANGKTEKAVLKALQRDPANPNKVLHLDLQRVSPTQKLSISVHLHFMGDDVARG 120 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 ++Q G + + ++V + C A ++P+SI VDL DL G+++H+ D++LPE + Sbjct: 121 VRQEGGVVARLLNDVEITCLAKDLPESIEVDLTDLGAGEALHLSDLKLPEGVEIPALKLG 180 Query: 176 -QLNITIATIVAPI 188 + + TI P Sbjct: 181 EDYDQPVVTIHKPR 194 >gi|302388649|ref|YP_003824470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] gi|302199277|gb|ADL06847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosediminibacter oceani DSM 16646] Length = 210 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A R GKG+ LR+NG++PA+ YG + + IA+ AK++ K L + Sbjct: 1 MAQVTLTAEERKLAGKGTLNELRRNGKVPAVFYGKNIENRTIAVDAKELHKLLK-THGEG 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +G E VI K+ Q D + + H DF +VS + V +P+ + G+K Sbjct: 60 VLIDLVLGGEKHTVIIKEIQRDALKGDITHVDFFRVSMTEKIEVDLPIVLK--GEPEGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L HE+++ +IP+ I VD++ L+IGD + ++DI+L +K + + + Sbjct: 118 AGGVLQHQLHELTIEALPADIPEQIEVDISHLQIGDVLMVKDIKLSDKITVIDDPGEVVV 177 Query: 183 TIVAPISG 190 T++AP SG Sbjct: 178 TVLAPTSG 185 >gi|163734579|ref|ZP_02142018.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] gi|161392072|gb|EDQ16402.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter litoralis Och 149] Length = 212 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI + + K+L F Sbjct: 1 MAGEIPDLVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ + + G + V VI +D Q V D+ H DF+++ + + + + V E ++P Sbjct: 61 KSTLFNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAVEVDGEEEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L ++ EV L+ A +IPD IT+D+++++IGD+I + + LPE + Sbjct: 121 GLKKGGVLTLIRPEVELIVTAGDIPDHITIDISEMEIGDNITISSVNLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIAQLSAPAG 190 >gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60] Length = 241 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 110/195 (56%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M + +L+AV+R + GKG++R LRK +PAI+YG +P IA+ ++ K L ++ Sbjct: 1 MSNQTFELNAVVRGDELQGKGASRRLRKQNLVPAIVYGADKEPASIAIRYNELIKSLETE 60 Query: 59 NFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +F + ILT+++ G+ V+ K Q P + +HADF ++ G + + VPV ++ Sbjct: 61 SFFSHILTINVEGQGTEEVVIKALQRHPAKNTPMHADFQRIVRGQAMHITVPVHYVGAED 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----S 172 +PG K GG E+ + + IP+ +TVD++ + +GDSIH+ DI+LPE Sbjct: 121 APGHKAGGIFVSNATELEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQLPEGVAIRELE 180 Query: 173 SMSQLNITIATIVAP 187 N T+AT+ AP Sbjct: 181 VTEPFNRTVATMQAP 195 >gi|171320165|ref|ZP_02909227.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] gi|171094579|gb|EDT39631.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MEX-5] Length = 202 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AIVSHVATEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3] Length = 231 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 1/183 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +RD VG GSAR R+ G +P ++YG P +A++ KD K LY+ + Sbjct: 22 MAEIILNVDVRDGVGTGSARAARRAGFVPGVLYGGDKAPVAVAVNEKDFRKSLYTGKLLG 81 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G+E VI KD Q DPVSD +H D ++V + + + + VPV F N + +P ++ Sbjct: 82 HLVTLKYGEETQPVIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEVPVYFKNADDAPFVR 141 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITI 181 QGG L VV H V ++ A++IP+ + VDL ++GD+I DI LP+ +++ + I Sbjct: 142 QGGSLEVVRHAVEIMVKADSIPEELVVDLIKSQMGDTIRFSDIELPKGVEPTITDRDFVI 201 Query: 182 ATI 184 ATI Sbjct: 202 ATI 204 >gi|161523692|ref|YP_001578704.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|189351544|ref|YP_001947172.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia multivorans ATCC 17616] gi|226736290|sp|A9AEY7|RL25_BURM1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160341121|gb|ABX14207.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia multivorans ATCC 17616] gi|189335566|dbj|BAG44636.1| large subunit ribosomal protein L25 [Burkholderia multivorans ATCC 17616] Length = 201 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ + + N I Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|152985832|ref|YP_001350652.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas aeruginosa PA7] gi|166223704|sp|A6VC67|RL25_PSEA7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150960990|gb|ABR83015.1| ribosomal protein L25, Ctc-form [Pseudomonas aeruginosa PA7] Length = 204 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 109/191 (57%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ Q+PA+IYG +P+ + L ++I+K L ++ Sbjct: 1 MVDFILNAQVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSVTLELREIAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L++G V+ K Q P ++HADFL+V +T HVP+ FINE+ + G+ Sbjct: 61 SHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEDVAVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ EV + C ++P+ I VD+ +++G +H+ D++ P+ + Sbjct: 121 KQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGN 180 Query: 178 NITIATIVAPI 188 ++ +A I A Sbjct: 181 DLAVANIHASR 191 >gi|115352914|ref|YP_774753.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria AMMD] gi|170701088|ref|ZP_02892064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|172061762|ref|YP_001809414.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia ambifaria MC40-6] gi|122322183|sp|Q0BBQ4|RL25_BURCM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736288|sp|B1YN53|RL25_BURA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115282902|gb|ABI88419.1| LSU ribosomal protein L25P [Burkholderia ambifaria AMMD] gi|170133989|gb|EDT02341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria IOP40-10] gi|171994279|gb|ACB65198.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia ambifaria MC40-6] Length = 202 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP+ + ++ N + Sbjct: 121 AVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19] Length = 198 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L +R++ G G AR R +G++P ++YG P PIA++ K L + Sbjct: 1 MAEIVLDVEVRERTGTGGARATRNDGKLPGVLYGGDKGPVPIAVNLNAFRKSLSTGKLNG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G+E VI K PV+D+ +H D +V E + + + VPV F N SPG+K Sbjct: 61 HLVTLKYGEETQKVIAKSIDFHPVTDVPVHFDLFRVDEHAKIRISVPVHFKNHELSPGLK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG LNV HE+ + PA++IP+ I +DL L+IG S+H+ D++LP S +++ +A Sbjct: 121 KGGALNVAFHELEIQVPADHIPEDIIIDLTGLEIGQSVHISDLKLPSDVSPVAKGLTVVA 180 Query: 183 TIVAPISGS 191 ++ A SG+ Sbjct: 181 SVTA--SGA 187 >gi|319787942|ref|YP_004147417.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] gi|317466454|gb|ADV28186.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudoxanthomonas suwonensis 11-1] Length = 207 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 101/188 (53%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ R+ GKG++R LR++G++PAI+YG P I L + + ++ F + Sbjct: 1 MANHVINVERREDEGKGASRRLRRDGKVPAIVYGGELAPVSIQLDHEKLWLAQQNEWFYS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-GI 121 +IL L + ++ V+ +D Q P ++H DF +VS+ + VP+RF+NE KSP G Sbjct: 61 SILDLSLNGDVQKVLLRDMQRHPYKQQIMHLDFQRVSDDEVLRAAVPLRFVNEAKSPAGK 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLN 178 G + EV++ C ++P++I VDL+DL +G +H+ ++LP + Sbjct: 121 TAGVVIMHELTEVNVACLPKDLPEAIEVDLSDLAVGGVVHLSGLKLPTGVEIPALALGPD 180 Query: 179 ITIATIVA 186 +A +VA Sbjct: 181 HDVAVVVA 188 >gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia endosymbiont of Drosophila melanogaster] gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] gi|71153674|sp|Q73II9|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801068|sp|C0R595|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp. wRi] Length = 203 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter denitrificans OCh 114] gi|122972523|sp|Q161I5|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114] Length = 212 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R++G +P I++G DP PI + + K+L F Sbjct: 1 MAGEIPDLVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ + + G + V VI +D Q V D+ H DF+++ + + + + V E+ +P Sbjct: 61 KSTLFNMKVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAVEVEGEDVAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L ++ EV L+ A +IPD +T+D+++++IGD+I + + LPE + Sbjct: 121 GLKKGGVLTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNITISSVNLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIAQLSAPAG 190 >gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas ingrahamii 37] gi|226736354|sp|A1STD7|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37] Length = 203 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL+A R +GKG++R LR +PAI+YG + + + KDI K + F +++ Sbjct: 2 SIKLTATTRTDLGKGASRRLRHADLVPAIVYGADKEAVSLTFTHKDIIKAEGIEAFYSSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L+I V+ KD Q + H D L+V + VP+ FINE S IK G Sbjct: 62 LDLEIDGVSEQVVLKDLQRHAFKARIQHLDLLRVDAKHKLHTTVPLHFINEGLSEAIKNG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLNI 179 G + +EV +LC ++P I VD++ ++IGD++H+ +I LP S+ + ++ Sbjct: 122 GIVYRTINEVEVLCLPKDLPSFIEVDISTMEIGDTLHLSNITLPAGVESVELNKGEEHDL 181 Query: 180 TIATIV 185 + +I Sbjct: 182 PMVSIA 187 >gi|78067602|ref|YP_370371.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia sp. 383] gi|109893349|sp|Q39CT9|RL25_BURS3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77968347|gb|ABB09727.1| LSU ribosomal protein L25P [Burkholderia sp. 383] Length = 201 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEISPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ ++ N + Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDITLPKGVVLVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|221199984|ref|ZP_03573027.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] gi|221206861|ref|ZP_03579873.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221211192|ref|ZP_03584171.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221168553|gb|EEE01021.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1] gi|221173516|gb|EEE05951.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2] gi|221180223|gb|EEE12627.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M] Length = 205 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MENHMKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP + Sbjct: 61 SSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C +P+ + VDL+ ++ G SIH +DI LP+ + + Sbjct: 121 KLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAE 180 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 181 NPVIASATIPAGA 193 >gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus watsonii C-113] gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus watsonii C-113] Length = 215 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 106/194 (54%), Gaps = 8/194 (4%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + +L A +R + GKG++R LR+ G++PA++YG +P + + + L F Sbjct: 1 MENLFELHADVRAEQGKGASRRLRRAGKVPAVLYGAAKEPISLIFDHNLLFRHLSHDAFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT+ + V+ K Q DPV+ + ++H D +VS +T+ VP+ FI + +PG Sbjct: 61 SHILTIHANGKAEKVVLKALQRDPVNPNKVLHLDLQRVSAAQKLTIKVPLHFIGDETAPG 120 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 +KQ G + + ++V + C A ++P+ I VDL +L +G+++H+ D++LP + Sbjct: 121 VKQEGGTVARLLNDVEVSCLAKDLPEYIEVDLANLGVGETVHLSDLKLPGGVEIPALKLG 180 Query: 176 -QLNITIATIVAPI 188 + + TI P Sbjct: 181 EDHDQPVVTIHKPR 194 >gi|126665169|ref|ZP_01736152.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] gi|126630539|gb|EBA01154.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter sp. ELB17] Length = 211 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 8/196 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNG-QIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ + A RD G+G++R LR+ +IPAIIYG D PI++ ++ K L ++ Sbjct: 1 MS-QDFVIEAFPRDDQGRGASRRLRRQERKIPAIIYGGHKDATPISIWHNELKKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LT+++ E VI KD Q P +L HADF ++++ + VHVP+ +NE +P Sbjct: 60 FYSRVLTIELNGEKESVILKDLQRHPYKPLLSHADFQRINKDEEIFVHVPLHLVNEETAP 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---- 174 IK GG + +V + C N+P+ I +DL D+++ +HM D++LPE Sbjct: 120 AIKTFGGVAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSDLKLPEGVRIPALQH 179 Query: 175 -SQLNITIATIVAPIS 189 ++ + I TI P Sbjct: 180 GAEHDQAIVTINKPKG 195 >gi|315501801|ref|YP_004080688.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Micromonospora sp. L5] gi|315408420|gb|ADU06537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora sp. L5] Length = 231 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRKGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 61 LFAIEVSDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + +S+ A +PD + + + G +I D+ LP + +A Sbjct: 120 ----IVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEETAVA 175 Query: 183 TI-VAPIS 189 ++ AP + Sbjct: 176 SVTAAPTA 183 >gi|302865257|ref|YP_003833894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] gi|302568116|gb|ADL44318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Micromonospora aurantiaca ATCC 27029] Length = 231 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRKGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 61 LFAIEVSDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + +S+ A +PD + + + G +I D+ LP + +A Sbjct: 120 ----IVHDHDTLSVTADATKVPDHLEASIEGAEPGTTITAADVELPAGVELATDEETAVA 175 Query: 183 TI-VAPIS 189 ++ AP + Sbjct: 176 SVTAAPTA 183 >gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans lithotrophicus ES-1] Length = 220 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R G G++R LRK ++P I+YG + I L + L ++ F +IL Sbjct: 3 IEISATTRKAQGTGASRRLRKTNRVPGIVYGAG-EATMIELDHNTLYYALRNEAFHASIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L++ + V+ +D+Q+ P + H DF +V V + VP+ F+N + +PG+K GG Sbjct: 62 SLELDGKKQSVLLRDFQMHPFRQQVQHIDFQRVDAKKKVHMKVPLHFLNADVAPGVKVGG 121 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--SQLNITIA 182 ++ V +E+ ++C ++P +I VDL+ L++G S+H+ D++LP+ + +A Sbjct: 122 GIISHVLNELEIVCLPADLPAAIEVDLSGLELGHSVHVSDVKLPKGVELAGHHHASDAVA 181 Query: 183 TIVAPIS 189 T+ P Sbjct: 182 TVQVPRG 188 >gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27] Length = 208 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 101/186 (54%), Gaps = 1/186 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R + GKG+AR +R+ G IP++IYG+ +P+ + +A++ + + S + Sbjct: 1 MANVTLDATARVETGKGAARKIRQAGNIPSVIYGHGREPQSLTTNARETERLIKSIAVSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ L+I + + ++ Q P ++H DF ++ G TV+V P+ +I + + Sbjct: 61 TVIELNIDGKTARTLIREIQRHPFKRSILHIDFQELVAGETVSVKCPIVYIGTPEGVRL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+ + HE+ + +IP+ I VD++ +K+G S+H+ D++LP + T+ Sbjct: 120 EGGILDQIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVADLKLPAGIKVLDDATATVC 179 Query: 183 TIVAPI 188 + P Sbjct: 180 VVQPPK 185 >gi|330502027|ref|YP_004378896.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] gi|328916313|gb|AEB57144.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina NK-01] Length = 204 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 5/192 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 E L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ Sbjct: 1 MTVEFALNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAA 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L+LD+ +V+ K Q P ++HADF +V G +T HVP+ FINE S G Sbjct: 61 FSHVLSLDVAGTKENVLIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEASSVG 120 Query: 121 IKQ-GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQ 176 +KQ GG++ +EV + C ++P+ I VD+ + + ++H+ DI+LP+ + Sbjct: 121 VKQGGGEVLHALNEVEVSCLPKDLPEFIEVDMAKVAVDQTVHLSDIKLPKGVELVALAHG 180 Query: 177 LNITIATIVAPI 188 ++ +A+I P Sbjct: 181 SDLPVASIHLPR 192 >gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila ananassae] Length = 203 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H D V +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDLQFVDKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|111225611|ref|YP_716405.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia alni ACN14a] gi|111153143|emb|CAJ64890.1| 50S ribosomal protein L25 [Frankia alni ACN14a] Length = 219 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 5/187 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 12 AMSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGT 71 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTL++ + KD Q P+ H D + V+ G V +PV+ + E + Sbjct: 72 NVLLTLELADGTELALAKDVQRHPIKGSFEHIDLVLVNRGEKVVADIPVQVVGEPHPDTL 131 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++ ++L A+ +P++I VD+ L+ G ++ + LPE + ++ + Sbjct: 132 -----VDQQVTSIALRADASRLPNAIEVDITGLEPGTAVLARQLALPEGAELDADPDLAV 186 Query: 182 ATIVAPI 188 +A Sbjct: 187 VQCLAKR 193 >gi|86742631|ref|YP_483031.1| 50S ribosomal protein L25/general stress protein Ctc [Frankia sp. CcI3] gi|109893363|sp|Q2J5Z0|RL25_FRASC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86569493|gb|ABD13302.1| LSU ribosomal protein L25P [Frankia sp. CcI3] Length = 210 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 4 AMSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGKPPRHIALPAHDLLHAFKTDAGT 63 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTL++ + + KD Q P+ H D + V+ G V +PV+ I E + Sbjct: 64 NVLLTLELAEGTELALAKDVQRHPIKGSFEHIDLVLVARGEKVVADIPVQVIGEPHPDTL 123 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++ +++ A +P I VD+ L+ G SI + LP + + ++ + Sbjct: 124 -----VDQQVTTIAVKADATRLPGPIEVDITGLEPGTSILARQLVLPAGSELDADPDLVV 178 Query: 182 ATIVAPISGS 191 +A + + Sbjct: 179 VQCLAKRTNA 188 >gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia baltica ATCC 49814] gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia baltica ATCC 49814] Length = 209 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+ +R++ GKG +R R+ ++PAI+YG P I+L +I K L + F Sbjct: 1 MAT-DILLNVELRERTGKGGSRQARRENRVPAILYGGKEAPVSISLDRIEILKALNTGKF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ ++ + VIP+D Q PV+++ +H D +V E V V VPV F E+ SPG Sbjct: 60 LSNLVEIEHKGKKQFVIPQDVQFHPVTEVALHVDLYRVKEDQLVKVEVPVHFTGEDVSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 IK+GG LN+V H V L PA +IP+ +T D++ L IGD++ + +I LP+ + +++ + Sbjct: 120 IKRGGSLNIVRHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIELPKDATPTITDRDF 179 Query: 180 TIATIVAPISGS 191 TIATIV + + Sbjct: 180 TIATIVGRTASA 191 >gi|107023736|ref|YP_622063.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia AU 1054] gi|116690823|ref|YP_836446.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia HI2424] gi|170734148|ref|YP_001766095.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia cenocepacia MC0-3] gi|123244641|sp|Q1BTG5|RL25_BURCA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223665|sp|A0KAM6|RL25_BURCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736289|sp|B1JYQ0|RL25_BURCC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|105893925|gb|ABF77090.1| LSU ribosomal protein L25P [Burkholderia cenocepacia AU 1054] gi|116648912|gb|ABK09553.1| LSU ribosomal protein L25P [Burkholderia cenocepacia HI2424] gi|169817390|gb|ACA91973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia cenocepacia MC0-3] Length = 201 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + P+ F+N SP +K Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ N I Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|226946187|ref|YP_002801260.1| 50S ribosomal protein L25/general stress protein Ctc [Azotobacter vinelandii DJ] gi|259646681|sp|C1DEV6|RL25_AZOVD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226721114|gb|ACO80285.1| ribosomal protein L25 [Azotobacter vinelandii DJ] Length = 198 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+ Q+PA+IYG +P+ I++ AKDI+K + + Sbjct: 1 MTDFALNAEVRSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSISILAKDITKLIEDEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++TL+I V+ K Q P ++HADFL+V ++ VP+ F+N S G+ Sbjct: 61 SHVITLNIAGATETVLIKALQRHPSKAAVMHADFLRVVADHKLSAVVPLHFVNAETSVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ V EV + C ++P+ I VDL +++G +H+ ++ +P + Sbjct: 121 KQQGGEVSHVISEVEVSCLPKDLPEFIEVDLAQVEVGQIVHLSNLSVPAGVELVALAHGN 180 Query: 178 NITIATIVAPI 188 ++ +A I A Sbjct: 181 DLAVANIHASR 191 >gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4] gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 7169] gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 12P80B1] gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 103P14B1] gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC1] gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC7] gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis BC8] gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis O35E] gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis CO72] Length = 223 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 112/191 (58%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 + L+ V R + GKG++R LRK+ +PAIIYG + I + +I K L +++F Sbjct: 1 MSQFTLNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEIVKALSNESF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++++T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S G Sbjct: 61 FSSVITINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSSVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 K+GG L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + + ++ Sbjct: 121 KKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEAD 180 Query: 177 LNITIATIVAP 187 LN TIAT+ P Sbjct: 181 LNRTIATMQPP 191 >gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 46P47B1] gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella catarrhalis 101P30B1] Length = 223 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 112/191 (58%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 + L+ V R + GKG++R LRK+ +PAIIYG + I + ++ K L +++F Sbjct: 1 MSQFTLNGVARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEVVKALSNESF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++++T+++ VI K Q P +H DF ++ G T+ +VPV INE+ S G Sbjct: 61 FSSVITINLDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIINEDSSVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 K+GG L ++ +++ + C N+P++I VD+ +L IGDSIH+ D+ LP + + ++ Sbjct: 121 KKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEAD 180 Query: 177 LNITIATIVAP 187 LN TIAT+ P Sbjct: 181 LNRTIATMQPP 191 >gi|238028669|ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia glumae BGR1] gi|237877863|gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1] Length = 204 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERTQQGTGASRRLRNTGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 61 DLEVAGKSQSVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ L+ G S+H +DI LP + ++ N I Sbjct: 121 AVVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNGVALVAHIDAENPVI 180 Query: 182 ATIVAPISG 190 AT P Sbjct: 181 ATATIPAGA 189 >gi|290959809|ref|YP_003490991.1| 50S ribosomal protein L25 [Streptomyces scabiei 87.22] gi|260649335|emb|CBG72450.1| 50S ribosomal L25 protein [Streptomyces scabiei 87.22] Length = 198 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KL A R + GKG+AR +R+ ++PA++YG+ +DP I L + L + N Sbjct: 1 MNMAEVKLEAETRTEFGKGAARRIRRASKVPAVVYGHGADPVHITLPGHALQLALRTPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L+LDI + IPK Q D + L H D L V G V V V V + Sbjct: 60 --VLLSLDIDGKTQLAIPKAVQRDAIKGFLDHVDLLLVKRGEKVNVEVYVHTEGDLAPGA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 V +++ A +IP+S+TV + L+ G SI +DI LP+ T+ + Sbjct: 118 YLLE----HVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPKGTTLAIDEDAV 173 Query: 181 IATIVAPIS 189 + ++A + Sbjct: 174 VLQVLAAQA 182 >gi|134296999|ref|YP_001120734.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia vietnamiensis G4] gi|166223669|sp|A4JHZ6|RL25_BURVG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134140156|gb|ABO55899.1| LSU ribosomal protein L25P [Burkholderia vietnamiensis G4] Length = 201 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F +IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ +D Q P +++H DF +V + VP+ F+N SP +K Sbjct: 61 DLEIAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C + +P+ + VDL+ ++ G S+H +DI LP + ++ N + Sbjct: 121 AIVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNGVALVAHVDAENPVV 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATVPAGA 189 >gi|21241720|ref|NP_641302.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas axonopodis pv. citri str. 306] gi|78046537|ref|YP_362712.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294666031|ref|ZP_06731293.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928009|ref|ZP_08189227.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] gi|71153676|sp|Q8PNT9|RL25_XANAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893405|sp|Q3BX01|RL25_XANC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21107089|gb|AAM35838.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str. 306] gi|78034967|emb|CAJ22612.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292604223|gb|EFF47612.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541623|gb|EGD13147.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118] Length = 211 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGK 180 Query: 178 NITIATIVA 186 +A + A Sbjct: 181 EHDVAVVAA 189 >gi|294627824|ref|ZP_06706403.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597738|gb|EFF41896.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 211 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ + V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGGVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGK 180 Query: 178 NITIATIVA 186 +A + A Sbjct: 181 EHDVAVVAA 189 >gi|297562917|ref|YP_003681891.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847365|gb|ADH69385.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 205 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG++R R+ G++PA++YG+ ++P+ + L ++ L + N Sbjct: 1 MSEVRIAAEPRTEFGKGASRRARRAGKVPAVLYGHGTEPRHLNLPGHELMLALKTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD + +PK Q D + L H D L VS+G V V +PV I E K+PG+ Sbjct: 58 VLIRLDGLDKDNLALPKSVQRDAIKGFLEHIDLLVVSKGEKVEVEIPVNLIGEVKAPGV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V++ A +IP+ + + DL+IG + D++LP + + + Sbjct: 117 ----LTQELVTVAVEAEATHIPEGVEFVVEDLEIGATPTAADVKLPSGVTLATDPEAILL 172 Query: 183 TIVAPI 188 T+ AP Sbjct: 173 TVSAPR 178 >gi|92113647|ref|YP_573575.1| 50S ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] gi|122420093|sp|Q1QXD2|RL25_CHRSD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91796737|gb|ABE58876.1| LSU ribosomal protein L25P [Chromohalobacter salexigens DSM 3043] Length = 215 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 105/190 (55%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQ-IPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + LSA +R +GKG++R LR+ + + AIIYG P+PI L K + + F Sbjct: 1 MSQFTLSAEVRHDLGKGASRRLRRENKKVAAIIYGGSKTPQPITLEKSAFYKAIEDEAFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++++ +D+ + VI +D Q P ++ HADF++V +T++VP+ E G+ Sbjct: 61 SSVINIDLEGQSEQVIIRDIQRHPYKALVTHADFMRVDATHEITMNVPLHINGEEACKGV 120 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + G L+V+ ++V + C +P+ + VD+ +L +G+++H+ D+ LPE S ++ Sbjct: 121 KDEDGVLHVLANDVEISCLPGKLPEYLEVDVTNLGLGETLHLSDLPLPEGVSLVALSHGE 180 Query: 176 QLNITIATIV 185 + + + ++ Sbjct: 181 EHDFGVVSVT 190 >gi|220932954|ref|YP_002509862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] gi|254801051|sp|B8D015|RL25_HALOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219994264|gb|ACL70867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halothermothrix orenii H 168] Length = 218 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 2/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A +R GKG AR LR+NG IP +IYG P+P+A+ AKD++K + + Sbjct: 1 MERYNLKAEVRKDTGKGVARKLRRNGLIPGVIYGKTRKPQPLAVDAKDLNKVVGGNAILD 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L +E + KD Q DPV ++H DF +S +TV VPV + + G+ Sbjct: 61 MTLVDGDKEEKETAVVKDLQRDPVQGNILHVDFQHISMTDKLTVSVPVHIV--GNARGVV 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + E+ + C +IPD I VD+ DL +GDS+ + DI P T ++ + I Sbjct: 119 AGGVLQQLAREIEVECLPTDIPDEIEVDITDLGLGDSLSVGDIEPPANTDFITPEDEVIV 178 Query: 183 TIVAPI 188 TIVAP Sbjct: 179 TIVAPS 184 >gi|254247176|ref|ZP_04940497.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] gi|124871952|gb|EAY63668.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184] Length = 205 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF +V + P+ F+N SP + Sbjct: 61 SSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP+ + ++ Sbjct: 121 KLSSAIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAE 180 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 181 NPVIASATVPAGA 193 >gi|325914244|ref|ZP_08176594.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] gi|325539499|gb|EGD11145.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937] Length = 211 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ F+NE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFVNEASSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I+LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGK 180 Query: 178 NITIATIVA 186 +A + A Sbjct: 181 EHDVAVVAA 189 >gi|117929152|ref|YP_873703.1| 50S ribosomal protein L25/general stress protein Ctc [Acidothermus cellulolyticus 11B] gi|117649615|gb|ABK53717.1| LSU ribosomal protein L25P [Acidothermus cellulolyticus 11B] Length = 203 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 98/184 (53%), Gaps = 5/184 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG+AR +R+ G++PA++YG+ + P+ I+L ++ L + N + Sbjct: 1 MSEVRIKAEPRTEFGKGAARRVRRAGKVPAVLYGHGTPPRHISLPGHELMLALKTPNVLL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + +PK Q + V+ L H D L V G V V VP+RF+ + G+ Sbjct: 61 RLEGLEGPDDGELALPKAVQRNVVTGFLEHVDLLLVRRGEQVEVDVPLRFVGTHAPGGVL 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + + A IP+ I V L+ L+IG SI++ D+RLP+ ++ ++ + + Sbjct: 121 EE-----HLVALPVRADATRIPEEIEVSLDGLEIGGSIYVRDVRLPDGVTAAAEPDEVVV 175 Query: 183 TIVA 186 ++ Sbjct: 176 HLLP 179 >gi|188992871|ref|YP_001904881.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. B100] gi|226694602|sp|B0RU99|RL25_XANCB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167734631|emb|CAP52841.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris] Length = 209 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 6/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEASSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + +EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEIPELKLGK 180 Query: 176 QLNITIA 182 + ++ + Sbjct: 181 EHDVAVV 187 >gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17] Length = 205 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 5/184 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+A RD+VGKG++R LR+ G++PA+IYG I L K + K L + +F T++ Sbjct: 4 TLTLAAETRDQVGKGASRSLRREGRVPAVIYGQNKAAASIHLEEKALVKALMTGHFFTSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + +D + + KD PV+D +H DFL++ E TVTV VPV F +E++S GIKQG Sbjct: 64 IMVDGQR----TLAKDVAFHPVTDRPLHVDFLRIGEHETVTVAVPVVFTDEDESRGIKQG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LNV HE+ ++ A +IP IT+ L L++GDSIH+ D++LP+ + + + IAT Sbjct: 120 GVLNVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISDVKLPKGATPAIDDRDFAIAT 179 Query: 184 IVAP 187 IV P Sbjct: 180 IVPP 183 >gi|254251379|ref|ZP_04944697.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] gi|124893988|gb|EAY67868.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158] Length = 206 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MESHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF +V + VP+ F+N SP + Sbjct: 61 SSILDLEVAGKSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAETSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C +P+ + VDL+ ++ G S+H +DI LP + ++ Sbjct: 121 KLSSAVISHVATEIEVECLPAALPEFLEVDLSKIEAGQSVHAKDIALPNGVALVAHIDAE 180 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 181 NPVIASATVPAGA 193 >gi|88810857|ref|ZP_01126114.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] gi|88792487|gb|EAR23597.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231] Length = 233 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A +R GK ++R LR+ ++PAI+YG D +AL + + + + F + I Sbjct: 4 ELKLDAAVRTDQGKSASRRLRRAKKLPAILYGAKKDAIALALDEEQVMGLMRDETFFSQI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILI-HADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + ++IG I KD Q PV +++ H D +V+ G + VP+ FINE K+ G+KQ Sbjct: 64 IDVNIGDTTERAILKDLQRHPVKPLVVLHMDLQRVTAGQKLRQRVPLHFINEEKAVGVKQ 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG L+ +V + C ++P I VD+ L + ++ H+ D++LP+ + + Sbjct: 124 GGTLHHDLLDVEIECLPRHLPAYIEVDIATLGLDEAYHLSDLKLPKGVVLTALGDDPDHD 183 Query: 179 ITIATIVAPI 188 ++ +I P Sbjct: 184 TSVVSIYTPR 193 >gi|254525296|ref|ZP_05137351.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] gi|219722887|gb|EED41412.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14] Length = 205 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++ R+ KG++R LR G IPAI+YG ++P I+L +I ++ F Sbjct: 1 MS-KTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP- 119 +IL L++ ++ V+ +D Q P +++H DF +V+E +T VP+ FINE+ SP Sbjct: 60 YASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPA 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G + EV++ C ++P+SI VDL DL GD +++ +I+LP+ + Sbjct: 120 GKAADVVVTHELKEVTISCLPKDLPESIEVDLADLAAGDVVYLSNIKLPKGVEIPALALG 179 Query: 176 -QLNITIAT 183 + I T Sbjct: 180 KDHDDAIVT 188 >gi|71899973|ref|ZP_00682119.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] Length = 207 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ A R GKG++R LR G IPAIIYG P I L+ + I + F + Sbjct: 1 MANHQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNDWFYS 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP Sbjct: 61 SILDLNVDGAGDEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAD 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 K GG + +EV + C ++P+ I VDL+ L +G IH+ DI LP + + Sbjct: 121 KAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITLPIGVELSTRLDKE 180 Query: 177 LNITIA 182 ++ + Sbjct: 181 HDMAVV 186 >gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas eutropha C91] gi|122313984|sp|Q0AGY6|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91] Length = 202 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R+ G G+ R LR G++P +IYG +PI L KD+ +L + F +IL Sbjct: 3 IEISANSRNLHGTGANRRLRIQGRLPGVIYGGGGTAQPIDLDHKDLYYKLKTDVFHASIL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 ++++ + V+ +D Q+ P ++H DF ++ + + V VP+ FIN + +PG+K Sbjct: 63 SINVDGKKEQVLLRDVQMHPFKQQVLHIDFQRIRQDQKIHVKVPLHFINADIAPGVKLSG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQLNITI 181 G ++ V E+ + C ++P+SITVDL+++ G +H D++LPE + N + Sbjct: 123 GMISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSDLKLPENVEIPALLRGDNQPV 182 Query: 182 ATIVAPISG 190 +T++ P G Sbjct: 183 STLIMPRGG 191 >gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3] Length = 220 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +K + A +R +GKG++R LR++ IPAIIYG +P P+ + KD+ K L ++ Sbjct: 1 MSEK-LAIEATVRSDLGKGASRRLRRSVDHIPAIIYGAGKEPTPLTIIRKDLEKSLENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ +++ ++ I KD Q P + ++HADFL+V + V VP+ FINE K Sbjct: 60 FFSQVIDVNVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVSVPLHFINEEKCH 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 G+K +GG + + E+ +LC IP+ I VD+ ++ D +H+ D++LPE Sbjct: 120 GVKIEGGIIEHMLTELEVLCLPGLIPEYIEVDMENVTTADILHISDLKLPEGVVSTALEL 179 Query: 174 MSQLNITIATIVAPISG 190 ++ + T+ A G Sbjct: 180 GEDHDMAVTTVSAKRGG 196 >gi|254447756|ref|ZP_05061221.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] gi|198262536|gb|EDY86816.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015] Length = 224 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 114/189 (60%), Gaps = 7/189 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A +R+ +GKG++R LR+ ++PA++YG+ DP + LS ++ + ++ F + I Sbjct: 4 NFVIKAQVREDLGKGASRRLRRADKLPAVLYGSG-DPVSLTLSHAEMILMVENEAFFSHI 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L LDI + I +D Q P ++L H DF +V G +TV VPV FINE S G+K + Sbjct: 63 LELDIDGNKENAIVRDMQRHPFKNLLTHIDFQRVVAGQEITVSVPVHFINEETSKGVKLE 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG+++ + E+ ++C ++P+ I VD+ +L +G+++H+ D+++PE S++ + + Sbjct: 123 GGEVHHLMTEIEVVCMPRHLPEYIEVDIAELGLGETLHLSDLKMPEGVKSVALSHGEEHD 182 Query: 179 ITIATIVAP 187 + +I P Sbjct: 183 DGVVSITKP 191 >gi|256374804|ref|YP_003098464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] gi|255919107|gb|ACU34618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinosynnema mirum DSM 43827] Length = 197 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+A R + GKG+AR R+ G+IPA++YG+ SDPK +AL A + ++ + ++ Sbjct: 1 MSEVRLAAEQRTEFGKGAARRTRRAGKIPAVLYGHGSDPKHLALPALEFARVVR-EHGQN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI + K P+ + + H D L V G VTV VP+ E + + Sbjct: 60 AVLTLDIDSATELALTKTVTTHPLKNYIEHVDLLLVKRGEKVTVDVPIVLTGEPAAATL- 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L + + A NIPD I + L G +H D+ LP+ ++ + + I Sbjct: 119 ----LTQESTTIQVEADALNIPDQIEFSIAGLGAGTQVHASDLELPKGSTLATDPEVLIL 174 Query: 183 TIV-APISGS 191 + AP + S Sbjct: 175 AVNDAPSAAS 184 >gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114] Length = 235 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 1/188 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + AV+R K LR G +P I+YG++ +++ + L + NF Sbjct: 1 MSSENNTIEAVLRSTKTKSELNKLRSEGFVPGILYGDIDKNINLSVKKSTLDHFLKTTNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +++ + V+P+D + + +S+ IH DF ++S + V V +PV+F+NE PG Sbjct: 61 KSKVFKINLDGKEYEVLPRDIEFENISNQPIHVDFQKLSTNTKVVVWIPVKFLNEETCPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNI 179 +K GG LN+V +V L CPA+ IP + VDL +IG+SIH+ I LPE ++ + Sbjct: 121 LKMGGVLNIVRRKVELDCPADKIPSELNVDLAKREIGESIHISAINLPEGVVPTIKDRDF 180 Query: 180 TIATIVAP 187 TIAT+ AP Sbjct: 181 TIATVAAP 188 >gi|285017303|ref|YP_003375014.1| 50s ribosomal protein l25 [Xanthomonas albilineans GPE PC73] gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans] Length = 214 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 99/188 (52%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ R+ GKG++R LR++G IPAI+YG P I L ++ + F Sbjct: 1 MAT-THEIKVQRREVEGKGASRRLRRDGVIPAIVYGGDLKPVNIQLDHNEVWLASQNDWF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP- 119 ++IL+L + ++ V+ +D Q P +++H DF +V++ + VP+ F++E+ SP Sbjct: 60 YSSILSLSLNGDVQKVLLRDMQRHPYKQLIMHIDFQRVNDNEVLHASVPLHFLHEDVSPA 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---- 175 G + +E+ ++C ++P+ + VDL+ L +GD IH+ D++LP Sbjct: 120 GKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSTLSVGDVIHLSDLKLPAGVELPQLKLG 179 Query: 176 -QLNITIA 182 + ++ + Sbjct: 180 KEHDVAVV 187 >gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis excentricus CB 48] gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis excentricus CB 48] Length = 195 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +R++ G G AR R G++P I+YG P IA+ + K LY+ Sbjct: 1 MADIVLDVEIRERTGTGGARATRNEGKVPGILYGGDKAPVAIAVKLNEFRKALYTGKLAG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G+E VI K PV+D+ +H D +V E T+ ++VPV F N SPGIK Sbjct: 61 HLVTLKYGEETQKVIAKAIDFHPVTDVPVHFDLYRVDETQTIKINVPVHFKNHEASPGIK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L V HE+ + PA +IP+ + VDL+ L IG S+H+ D+ LP +++ ++ IA Sbjct: 121 KGGALTVAFHELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSLPSDVTAVPGKDVVIA 180 Query: 183 TIVAPIS 189 +I A + Sbjct: 181 SITASAA 187 >gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762455|ref|ZP_04760532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|68053039|sp|Q5NL76|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ZM4] gi|241372957|gb|EER62624.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 220 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 1/186 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A RD+ GKG++R +R+ G +PA+IYG+ + I + + K L + +FM ++ Sbjct: 4 TLNLLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAMGITVDHIALFKMLNTGHFMNSV 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+D+ + + IPKD Q PV+D ++H DFL+VS S V V +PV +++E KSPGIK G Sbjct: 64 VTIDVDGQKLPTIPKDVQFHPVTDRVLHVDFLRVSANSLVEVAIPVSYVDEEKSPGIKLG 123 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NITIAT 183 G LN++ HE+ L A IP+ I V + L++GDSIH+ I+LPE T AT Sbjct: 124 GVLNIIHHELKLKVKATAIPEEIVVSVAGLEVGDSIHLNQIKLPEGAELAHDEHESTAAT 183 Query: 184 IVAPIS 189 ++AP Sbjct: 184 VIAPSG 189 >gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010] gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010] Length = 240 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 17/203 (8%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + ++ A R GKG++R LR G+IPA++YG DP I+++ + L + F Sbjct: 12 MENLFEVQAEARTDEGKGASRRLRHAGKIPAVVYGADKDPVSISINHNQFLRHLDEEAFY 71 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + V+ KD Q P +D +IHADFL+V +T+ VPV FI E+ +PG Sbjct: 72 AHILTLDIAGKKDQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPVHFIGEDVAPG 131 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------ 174 +K GG+++ + EV + C ++P+ I D++ +++ S+H+ ++ LP+ S Sbjct: 132 VKDGGQVSHMITEVEIACLPQDLPEYIEADISGMEMDGSLHLTELVLPKGVSLTALTHHQ 191 Query: 175 ---------SQLNITIATIVAPI 188 S + +A+I P Sbjct: 192 EEELEEGERSAYDQAVASIHMPR 214 >gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25/general stress protein Ctc [Granulibacter bethesdensis CGDNIH1] gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1] Length = 219 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 2 DQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 + A R + GKG+AR R+ G++PA+IYG P I L + I + L + Sbjct: 6 SMATFTQIEAEARSRAGKGAARATRREGKVPAVIYGARQTPDLIKLDPRIIHRELNRGGW 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +++ + +D Q PV+D H DF +++ G V V V V+F NE SPG Sbjct: 66 RSRLYEINVDGASTRALIRDVQFHPVTDAPEHVDFQRLAAGEPVRVAVAVQFQNEATSPG 125 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR-LPEKTSSMSQLNI 179 +K+GG LN+V H V +LC +++P+ DL L IGD+I D++ E ++ + Sbjct: 126 LKRGGVLNIVRHTVEVLCDPDHVPEHFEADLGTLDIGDNIRWSDLKGTGEAKPTILDRDF 185 Query: 180 TIATIVAP 187 +AT+ P Sbjct: 186 VVATVAPP 193 >gi|83313447|ref|YP_423711.1| ribosomal protein L25 [Magnetospirillum magneticum AMB-1] gi|109893368|sp|Q2VZ23|RL25_MAGMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|82948288|dbj|BAE53152.1| Ribosomal protein L25 [Magnetospirillum magneticum AMB-1] Length = 202 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F Sbjct: 1 MS-EAIAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGF 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T + +D+GK+ + +D Q+ PV+D IH DF++VS + V VPV F NE KSP Sbjct: 60 FTQLFNVDLGKDGKHLCLARDVQMHPVTDQPIHVDFMRVSADHAIHVKVPVHFTNELKSP 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLN 178 GIK+GG LNV HE+ + C N+IP I +DL+ L+IG SIH+ D++LP Sbjct: 120 GIKKGGVLNVELHEIEITCSPNDIPHEILIDLDGLEIGASIHLSDLKLPAGAKPYHVASG 179 Query: 179 ITIATIVAP 187 T+A+I AP Sbjct: 180 ATVASIAAP 188 >gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas neptunium ATCC 15444] gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 2/191 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + + +R++ G G AR R NG +P ++YG DP I+L ++ K + + +F Sbjct: 1 MSKSQIVFNVEVRERTGTGGAREARNNGFVPGVLYGGGIDPVAISLKKNEVIKAIETGHF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ TL E VIP+ Q+ PV+D +H D ++ + V VPV F SPG Sbjct: 61 LSATATLIHKGERQLVIPQGIQMHPVTDQPMHVDLRRIKVDQIIKVEVPVHFTGMEASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K+GG LNVV H V L PA IP+++ D++ L++GD++ + +I LPE ++ + Sbjct: 121 LKKGGTLNVVRHSVELNVPAGKIPEALEADISKLEVGDNVKISNITLPEGAEPVITDRDF 180 Query: 180 TIATIVAPISG 190 TIATI G Sbjct: 181 TIATIAG-RGG 190 >gi|77359996|ref|YP_339571.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] gi|109893380|sp|Q3IK85|RL25_PSEHT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76874907|emb|CAI86128.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125] Length = 204 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 7/195 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R++ G G++R LR+ ++PAI+YG + I L KD+ K S+ F Sbjct: 1 MSNKTYVYNAELREQTGTGASRRLRREDKVPAIVYGANKEATSITLDHKDVIKAQESEGF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ILTL+IG E V I KD Q P + H DF ++ + VP+ F+ E+ Sbjct: 61 YTQILTLNIGGESVETILKDIQRHPFKPKVTHLDFQRIDANQKLHTIVPIHFVGEDVVEK 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + E+ + C IPD +TVD++ L GDS+H+ D+ LP SS+ Sbjct: 121 LGTTVV--RQLTEIEISCFPKAIPDFVTVDVSKLVAGDSLHISDVALPAGVSSIDLAKGP 178 Query: 176 QLNITIATIVAPISG 190 + +I + A S Sbjct: 179 GHDQSILIVKANKSA 193 >gi|21230347|ref|NP_636264.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769659|ref|YP_244421.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas campestris pv. campestris str. 8004] gi|71153677|sp|Q8PC62|RL25_XANCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81304386|sp|Q4URC2|RL25_XANC8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21111900|gb|AAM40188.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574991|gb|AAY50401.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris str. 8004] Length = 209 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 6/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P +++H DF +VS ++ VP+ FINE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEAISPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----- 175 + +EV ++C ++P+ I +DL+ L++G IH+ +I LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEIPELKLGK 180 Query: 176 QLNITIA 182 + ++ + Sbjct: 181 EHDVAVV 187 >gi|330818353|ref|YP_004362058.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] gi|327370746|gb|AEA62102.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3] Length = 204 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERTLQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ + +V+ +D Q P +++H DF +V + VPV F+N SP +K Sbjct: 61 DLEVAGKSQNVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C +P+ + VDL+ L+ G S+H +DI LP S ++ N I Sbjct: 121 AVVSHVVVELDIECLPAALPEFLEVDLSKLEAGQSVHAKDIVLPNGVSLVAHVDAENPVI 180 Query: 182 ATIVAPISG 190 AT P Sbjct: 181 ATATIPAGA 189 >gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [marine gamma proteobacterium HTCC2207] Length = 215 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 8/195 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + L A R+ GKG++R LR+ ++PAI+YG P I+L KD++K L ++ Sbjct: 1 MST-DFTLHAKGREDTGKGASRRLRRLAAEVPAIVYGGKKTPAQISLIHKDVAKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ LDI + VI KD Q P+ +++H DFL+V++ + + P+ FINE+ Sbjct: 60 FYSHVIALDIDGKSEDVILKDVQRHPIKPVILHLDFLRVNKKTLLQTKAPIHFINEDICV 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--- 175 G+K GG + E+ + C ++P+ I VD+ ++IG ++H+ DI P+ S++ Sbjct: 120 GVKIGGGLIAHTMTEIDISCLPQDLPEYIEVDMAAVEIGQTLHISDIVFPKGVESVALSH 179 Query: 176 --QLNITIATIVAPI 188 ++ I +I P Sbjct: 180 GPDHDLPIVSINKPK 194 >gi|76578961|gb|ABA48436.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei 1710b] Length = 223 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 16 MEKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 75 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP + Sbjct: 76 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAV 135 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 136 KLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAE 195 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 196 NPVIASATIPAGA 208 >gi|126454225|ref|YP_001064867.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1106a] gi|134279781|ref|ZP_01766493.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217420309|ref|ZP_03451815.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|226199547|ref|ZP_03795104.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242314590|ref|ZP_04813606.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|251767336|ref|ZP_02266847.2| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] gi|68053086|sp|Q63XL9|RL25_BURPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893348|sp|Q3JW87|RL25_BURP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52208574|emb|CAH34510.1| ribosomal L25p family protein [Burkholderia pseudomallei K96243] gi|126227867|gb|ABN91407.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a] gi|134248981|gb|EBA49063.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305] gi|217397613|gb|EEC37629.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576] gi|225928428|gb|EEH24458.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9] gi|242137829|gb|EES24231.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b] gi|243063117|gb|EES45303.1| 50S ribosomal protein L25 [Burkholderia mallei PRL-20] Length = 208 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP + Sbjct: 61 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 121 KLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAE 180 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 181 NPVIASATIPAGA 193 >gi|325921463|ref|ZP_08183318.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] gi|325548010|gb|EGD19009.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865] Length = 211 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K ++ R GKG++R LR G IPAI+YG +P I L+ + I ++ F Sbjct: 1 MAKTHEIKVERRANEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 ++IL L++ ++ V+ +D Q P ++IH DF +VS ++ VP+ F+NE SP G Sbjct: 61 SSILDLNLNGDVQQVLLRDMQRHPFKQLIIHIDFQRVSANEKLSAAVPLHFVNEATSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QL 177 + +EV ++C ++P+ I VDL L++G+ IH+ +I LP Sbjct: 121 KSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEITLPAGVEIPELKLGK 180 Query: 178 NITIATIVA 186 +A + A Sbjct: 181 EHDVAVVAA 189 >gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Lens] gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella pneumophila str. Paris] gi|68053068|sp|Q5WTE8|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053069|sp|Q5X1N8|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053082|sp|Q5ZS67|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris] gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens] gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b] Length = 219 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 6/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ Sbjct: 1 MSTIQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGI Sbjct: 61 SSVFDITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG + +V + C A ++P+ I VD++ + + D +H+ D++LP+ Sbjct: 121 KAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVADGS 180 Query: 177 LNITIATIVAPI 188 + + +I A Sbjct: 181 HDAPVVSIHAAK 192 >gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby] gi|296108297|ref|YP_003619998.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] gi|166223693|sp|A5IAS4|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding protein [Legionella pneumophila str. Corby] gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy] Length = 219 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 6/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R +GKG++R LR+ ++PA+IYG P I S + K L +++ Sbjct: 1 MSTIQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + + ++ HVI K Q P I++H D +VS + VPV FINE +SPGI Sbjct: 61 SSVFDITVDGKVEHVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG + +V + C A ++P+ I VD++ + + D +H+ D++LP+ Sbjct: 121 KAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVTDGS 180 Query: 177 LNITIATIVAPI 188 + + +I A Sbjct: 181 HDAPVVSIHAAK 192 >gi|312194510|ref|YP_004014571.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] gi|311225846|gb|ADP78701.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EuI1c] Length = 209 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG AR R+ G++PA++YG+ P+ IALS +++ + Sbjct: 1 MSEVRIVAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALSQRELLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LT+D+G +PKD Q P+ H D + V G VTV VPV E + Sbjct: 61 VLLTVDLGDGTELALPKDVQRHPIKGSFEHVDLVIVRRGEKVTVDVPVNITGE-----LH 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L+ VS+ PA IPDS+TVD+ + G + LP+ IA Sbjct: 116 PDAILDQPNTTVSVSAPATAIPDSLTVDITGMGPGSHYTAGQLELPDGVELEGDPETIIA 175 Query: 183 -TIVAPISG 190 + P + Sbjct: 176 LALTKPTAA 184 >gi|124385169|ref|YP_001027484.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10229] gi|238561329|ref|ZP_00442185.2| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] gi|254175111|ref|ZP_04881772.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|254196454|ref|ZP_04902878.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|254357505|ref|ZP_04973779.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|124293189|gb|ABN02458.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229] gi|148026569|gb|EDK84654.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280] gi|160696156|gb|EDP86126.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399] gi|169653197|gb|EDS85890.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13] gi|238524791|gb|EEP88222.1| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4] Length = 240 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 33 MEKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 92 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP + Sbjct: 93 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAV 152 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 153 KLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAE 212 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 213 NPVIASATIPAGA 225 >gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71902209|ref|ZP_00684221.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M12] gi|226694605|sp|B0U5Y7|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon] gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1] gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12] Length = 207 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F + Sbjct: 1 MANHQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGDQRPVSIQLNHEQIWLAQQNEWFYS 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 +IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP G Sbjct: 61 SILDLNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 G + +EV + C ++P+ I VDL+ L +G IH+ DI P + + Sbjct: 121 KAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLDKE 180 Query: 177 LNITIA 182 ++ + Sbjct: 181 HDMAVV 186 >gi|254262121|ref|ZP_04953175.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] gi|254220810|gb|EET10194.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a] Length = 208 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +K K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MEKHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + P+ F+N SP + Sbjct: 61 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---L 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 121 KLSSAVVSHVVTEIEIECLPADLPEFLEVDLSXIEAGQSLHAKDIALPNGVALTAHVDAE 180 Query: 178 NITIATIVAPISG 190 N IA+ P Sbjct: 181 NPVIASATIPAGA 193 >gi|284159402|ref|YP_441031.3| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|83654462|gb|ABC38525.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia thailandensis E264] Length = 223 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 16 MENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 75 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP + Sbjct: 76 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAV 135 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQL 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 136 KLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDAE 195 Query: 178 NITIATIVAPISG 190 N +A+ P Sbjct: 196 NPVVASATIPAGA 208 >gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas subvibrioides ATCC 15264] Length = 236 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 1/189 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +R+ +G G AR R++G +P I+YG P I+++ KD K LY+ + Sbjct: 1 MAEIILNVDVRENIGTGGARAARRSGAVPGILYGGDKAPVAISVNEKDFRKNLYTGKLLG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL G E VI KD Q DPVSD +H D ++V T+ + VP+ FINE++ + Sbjct: 61 HLVTLKYGDETQSVIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEVPIHFINEDQCKAFR 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITI 181 QGG L +V H V +L A++IP+ + VDL K+GD++ D+++P +++ + I Sbjct: 121 QGGTLEIVRHSVEILVRADHIPEDLVVDLAGHKLGDTLRWSDVKVPSDVEATITDRDFVI 180 Query: 182 ATIVAPISG 190 +I + Sbjct: 181 GSIKVSSAA 189 >gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] gi|171769611|sp|A7HVD8|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum lavamentivorans DS-1] Length = 216 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 77/179 (43%), Positives = 116/179 (64%), Gaps = 1/179 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L A R+K KG+ R LR+ G++PA+IYG+ P+ IA+S KD+S + FM Sbjct: 1 MAETQTLKAEAREKGSKGAVRSLRRAGRVPAVIYGDKQSPELIAVSYKDVSALYQTGTFM 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L ++IG + VIP+D Q +PV D +IH DFL++ + +TVTV VPV F N SPGI Sbjct: 61 SHVLDVEIGGKTERVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHEASPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 K GG LN+V HEV L+CPA+ IP+ + +DL ++G SIH+ ++LP K +++ + Sbjct: 121 KAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHISAVKLPAKVSPTITDRDF 179 >gi|330465678|ref|YP_004403421.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] gi|328808649|gb|AEB42821.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Verrucosispora maris AB-18-032] Length = 235 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRKGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +PK Q DP+ D H D L V G VTV VPV E + Sbjct: 61 LFAIEVSDGTQALALPKAIQRDPIKDTFEHVDLLLVRRGEKVTVEVPVELTGEAAKDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + VS+ A +PD + + + G + D+ LP T+A Sbjct: 120 ----IVHDHDTVSVTAEATKVPDHLEASIEGAEPGVQVTAADVDLPAGVELAGDPEQTVA 175 Query: 183 TI-VAPIS 189 T+ AP + Sbjct: 176 TVTAAPTA 183 >gi|254495954|ref|ZP_05108862.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] gi|254354832|gb|EET13459.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella drancourtii LLAP12] Length = 220 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 6/195 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 L A R +GKG++R LR+ ++PA+IYG P I + K L +++ Sbjct: 1 MSNILLEAESRTDMGKGASRRLRRLENKVPAVIYGGEKKPMSIHFQHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + I ++ HVI K Q P +++H D +VS+ + VP+ F+NE ++PGI Sbjct: 61 SSVFDITIDGKVEHVILKALQRHPYKPLVMHMDLQRVSKKDVLVKLVPLHFVNEQQAPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG +N ++ + C A ++P+ I VD+ + + D IH+ +++LP+ Sbjct: 121 KAGGMINHTMTQIEIRCQAKDLPEFIEVDMAKVALDDVIHLSNLKLPKGVHLTVDLADHS 180 Query: 177 LNITIATIVAPISGS 191 + + +I P + Sbjct: 181 HDSPVVSIHMPRVSA 195 >gi|145593348|ref|YP_001157645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora tropica CNB-440] gi|145302685|gb|ABP53267.1| LSU ribosomal protein L25P [Salinispora tropica CNB-440] Length = 233 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 5/184 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRRGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 V +PK Q DP+ D H D L V G VTV VPV+ + E Sbjct: 61 LFAIDISDGTQVLALPKAIQRDPIKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAA----- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G + +S+ A N+PD + + L+ G + D++LP + + +A Sbjct: 116 KGTLIVHDHDSLSVTADATNVPDHLDASIEGLEAGSQVAAADVQLPAGVELATDPELPVA 175 Query: 183 TIVA 186 + A Sbjct: 176 AVTA 179 >gi|257140316|ref|ZP_05588578.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis E264] gi|109893350|sp|Q2T1B8|RL25_BURTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 208 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 5/193 (2%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K+ A R + G G++R LR G+ I+YG + P+ I L + L + F Sbjct: 1 MENHMKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFH 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++IL L++ + V+ +D Q P +++H DF ++ + VP+ F+N SP + Sbjct: 61 SSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAV 120 Query: 122 KQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQL 177 K ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + Sbjct: 121 KLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDAE 180 Query: 178 NITIATIVAPISG 190 N +A+ P Sbjct: 181 NPVVASATIPAGA 193 >gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium praevalens DSM 2228] Length = 222 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 3/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-FM 61 + + A +R + GKG+AR +R++G IP ++YG +DP+ I + DI K L+S F Sbjct: 1 MERHSIEAELRTETGKGAARTIRRDGLIPGVVYGRGNDPRSIKVDPLDIEKLLHSNAIFD 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + D G++ VI KDYQ D + L+H DF +S +TV VP+R + G+ Sbjct: 61 LTFVGEDGGEDEATVIIKDYQKDVIKQNLLHVDFQFISMDEKITVSVPMRLE--GDALGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG L + E+ + IP+ IT+D+++L++G+S+ + D+ L E +++ + I Sbjct: 119 RNGGVLQHLLREIEIDALPAEIPEEITIDISELEVGESLAVADLELSEGLDLVTESDEVI 178 Query: 182 ATIVAP 187 T+V P Sbjct: 179 VTVVTP 184 >gi|53724085|ref|YP_104605.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei ATCC 23344] gi|121600473|ref|YP_991440.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei SAVP1] gi|126449568|ref|YP_001082450.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia mallei NCTC 10247] gi|161723210|ref|YP_107146.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei K96243] gi|162210089|ref|YP_332166.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 1710b] gi|167718014|ref|ZP_02401250.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei DM98] gi|167737031|ref|ZP_02409805.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 14] gi|167814140|ref|ZP_02445820.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 91] gi|167822665|ref|ZP_02454136.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 9] gi|167844236|ref|ZP_02469744.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei B7210] gi|167892746|ref|ZP_02480148.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 7894] gi|167901242|ref|ZP_02488447.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei NCTC 13177] gi|167909460|ref|ZP_02496551.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 112] gi|167917488|ref|ZP_02504579.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei BCC215] gi|237810771|ref|YP_002895222.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] gi|254181866|ref|ZP_04888463.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|254187800|ref|ZP_04894312.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|254201692|ref|ZP_04908056.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|254207026|ref|ZP_04913377.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|254296082|ref|ZP_04963539.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|68053085|sp|Q62FC2|RL25_BURMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223666|sp|A3MQB4|RL25_BURM7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223667|sp|A1UZN7|RL25_BURMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52427508|gb|AAU48101.1| ribosomal protein L25 [Burkholderia mallei ATCC 23344] gi|121229283|gb|ABM51801.1| 50S ribosomal protein L25 [Burkholderia mallei SAVP1] gi|126242438|gb|ABO05531.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247] gi|147747586|gb|EDK54662.1| 50S ribosomal protein L25 [Burkholderia mallei FMH] gi|147752568|gb|EDK59634.1| 50S ribosomal protein L25 [Burkholderia mallei JHU] gi|157805601|gb|EDO82771.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e] gi|157935480|gb|EDO91150.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237] gi|184212404|gb|EDU09447.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655] gi|237505924|gb|ACQ98242.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346] Length = 204 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG + P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N I Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa Temecula1] gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa M23] gi|71153679|sp|Q87A23|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694604|sp|B2IA79|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1] gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella fastidiosa M23] gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa subsp. fastidiosa GB514] Length = 207 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F + Sbjct: 1 MANHQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYS 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 +IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP G Sbjct: 61 SILDLNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 G + +EV + C ++P+ I VDL+ L +G IH+ DI P + + Sbjct: 121 KVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLDKE 180 Query: 177 LNITIA 182 ++ + Sbjct: 181 HDMAVV 186 >gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506] Length = 232 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 83/179 (46%), Positives = 119/179 (66%), Gaps = 1/179 (0%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + ++ A R+KVGKG+AR LR+N IPA+IYG+ DP PIAL K+ L++ FM Sbjct: 1 MHQTFEVKAEKREKVGKGAARALRRNAMIPAVIYGDNKDPLPIALPYKETFLALHAGGFM 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T + T+ +GKE + V+P+DYQLDPV D L H DFL+V E + VTV +PV F NE +SPG+ Sbjct: 61 TNLATITVGKEKIKVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 ++GG LNVV H V + C AN+IP+ T+DL +IGD++ I LP+ +++ + Sbjct: 121 ERGGVLNVVRHAVEVECSANSIPEYFTIDLTGTEIGDTLASSSITLPDDVKFTITDRDF 179 >gi|295675403|ref|YP_003603927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] gi|295435246|gb|ADG14416.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. CCGE1002] Length = 205 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFLNQETNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVINEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|209519642|ref|ZP_03268432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] gi|209499928|gb|EDZ99993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. H160] Length = 206 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR +G+ P I+YG +D + I L + L + F ++IL Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFMNQESNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ I VDL ++ G S+H +DI LP + ++ N + Sbjct: 121 AVISHVLNEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 210 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 +N V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S++ SQ N + Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSAVVRGSQQNPVL 180 Query: 182 ATIVAPIS 189 ++V P++ Sbjct: 181 VSVVTPVA 188 >gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71] Length = 221 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 8/197 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ ++A +R +GKG++R LR++ IPAIIYG DP P+ + KD+ K L ++ Sbjct: 1 MS-EQLAIAATVRSDLGKGASRRLRRSVDHIPAIIYGAGKDPAPLTIVRKDLEKALENEA 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + ++ + + ++ I KD Q P + ++HADFL+V + V++P+ FINE K Sbjct: 60 FYSQVIDVSVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVNIPLHFINEEKCH 119 Query: 120 GIK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-----SS 173 G+K +GG + + E+ +LC IP+ I VD+ ++ D IH+ D++LPE Sbjct: 120 GVKIEGGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHISDLKLPEGVVSTALEL 179 Query: 174 MSQLNITIATIVAPISG 190 ++ + ++ A G Sbjct: 180 GEDHDMAVTSVSAKRGG 196 >gi|126439855|ref|YP_001057621.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia pseudomallei 668] gi|166223668|sp|A3N5K0|RL25_BURP6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|126219348|gb|ABN82854.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668] Length = 204 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR G+ I+YG P+ I L + L + F ++IL Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEVAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF ++ + P+ F+N SP +K Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V E+ + C ++P+ + VDL+ ++ G S+H +DI LP + + N I Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180 Query: 182 ATIVAPISG 190 A+ P Sbjct: 181 ASATIPAGA 189 >gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217] gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217] Length = 208 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P I++G +P PI + + KRL F Sbjct: 1 MAGEIPDLQAQERAGTGKGAARAARREGMVPGIVFGGDKEPLPINIPFNALLKRLKKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G++ V VI +D Q D V D+ H D +++ + + + + V FIN P Sbjct: 61 KSTLFNLQVEGQDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINHENCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTS-SMSQL 177 +++GG L VV +EV L A +IPD +TVDL+ + KIGD + + I LPE + + Sbjct: 121 ALRKGGVLTVVRNEVELTVTAGDIPDHLTVDLSKISKIGDVVTISMIDLPEGSEPVIKDR 180 Query: 178 NITIATIVAPIS 189 + I I AP + Sbjct: 181 DFVICNISAPSA 192 >gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568] Length = 205 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 1/183 (0%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ +R+ VG G AR R+ G +P ++YG P I+++ ++ K LY+ + Sbjct: 1 MAEIILNVDVRENVGTGGARAARREGAVPGVLYGGDKAPVAISVNEREFRKSLYTGKLIG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL GKE VI KD Q DPVSD +H D ++V + + +PV F+N +++P + Sbjct: 61 HLVTLKYGKETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIEIPVAFVNADEAPYTR 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITI 181 QGG L VV H V ++ A+ IP + VDL +IG++I + DI+LPE +++ + I Sbjct: 121 QGGMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQLPEGAAPTITDRDFMI 180 Query: 182 ATI 184 A I Sbjct: 181 AAI 183 >gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7] Length = 207 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR G++PAI+YG +DP I L +I L + F +IL Sbjct: 1 MKFNATSRSDKGTSASRRLRHAGRVPAIVYGGTADPLSIELDHNEIFHALRKEAFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 + + + V+ + Q P ++H DF +V T+T VP+ FIN + SP +K Sbjct: 61 DMQLDGKGQQVLLRAVQWHPYKPQVLHVDFQRVDAKQTITTKVPLHFINGDASPAVKLSG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 ++ V E+ + C ++P +I +DL +L G ++++ DI LP+ + ++ ++ + Sbjct: 121 QIISHVMTELEITCLPVDLPQAIEIDLGELAAGGNVYLSDITLPQGVTHTVHGAEGDLVL 180 Query: 182 ATIVAPISG 190 A +A G Sbjct: 181 AAALAKRGG 189 >gi|91781712|ref|YP_556918.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia xenovorans LB400] gi|122970734|sp|Q145X3|RL25_BURXL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91685666|gb|ABE28866.1| LSU ribosomal protein L25P [Burkholderia xenovorans LB400] Length = 207 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQETNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP + ++ N I Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella fastidiosa 9a5c] gi|71153678|sp|Q9PA77|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c] Length = 208 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ A R GKG++R LR G IPAIIYG P I L+ + I ++ F + Sbjct: 1 MANHQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYS 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP-G 120 +IL L++ G V+ +D Q P +++H DF +VS + ++V VP+ FIN+ SP G Sbjct: 61 SILDLNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS----Q 176 G + +EV + C ++P+ I VDL+ L +G IH+ DI P + + Sbjct: 121 KASGVVITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHLSDITFPIGVELSTRLDKE 180 Query: 177 LNITIA 182 ++ + Sbjct: 181 HDMAVV 186 >gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma phagocytophilum HZ] gi|109893343|sp|Q2GII5|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma phagocytophilum HZ] Length = 211 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 MD ++ K+ A +R++ G GSAR LR G IPA+IYG DP I+LS D K+ + Sbjct: 1 MDHEDMIKVDASVRERCGTGSARALRARGLIPAVIYGKNRDPINISLSQVDFLKKCRTFP 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ L IG++ +VI KD Q PVS + H DF V + + + + VP+ F+NE K Sbjct: 61 IFSKLIELCIGEKKEYVITKDIQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNEQKCV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+K+GG +N++ + + C ++IP S+ VDL D+ IG S+H+ D++LP + + + + Sbjct: 121 GVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVMKEED 180 Query: 179 ITIATIVAPISG 190 IAT+VA G Sbjct: 181 PVIATVVASGGG 192 >gi|146306088|ref|YP_001186553.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas mendocina ymp] gi|166223706|sp|A4XR55|RL25_PSEMY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145574289|gb|ABP83821.1| LSU ribosomal protein L25P [Pseudomonas mendocina ymp] Length = 201 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 112/191 (58%), Gaps = 5/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKN-GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+A +R +GKG++R LR+N +PA+IYG P+ I+L AKD++K L ++ Sbjct: 1 MTDFALNAEVRSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + +L +++ +V+ K Q P ++HADF +V G +T HVP+ FINE + G+ Sbjct: 61 SHVLAVNVAGATENVVIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEATAVGV 120 Query: 122 KQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 KQ G+++ +EV + C ++P+ I VD+ +++G ++HM D++LP+ + Sbjct: 121 KQQGGEISHTINEVEVSCLPKDLPEFIEVDMAAVEVGQTVHMSDLKLPKGVELVALAHGN 180 Query: 178 NITIATIVAPI 188 ++ ++ I A Sbjct: 181 DLAVSNIHASR 191 >gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Gardel] gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel] gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 219 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 12 MTDQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAA 71 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + Sbjct: 72 LSTHLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCV 131 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP + + + + N Sbjct: 132 GVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHN 191 Query: 179 ITIATIV 185 T+ TI Sbjct: 192 PTLVTIS 198 >gi|296161527|ref|ZP_06844332.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] gi|295888171|gb|EFG67984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia sp. Ch1-1] Length = 205 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQESNPAVKLAS 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP + ++ N I Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|270159183|ref|ZP_06187839.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|289165989|ref|YP_003456127.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] gi|269987522|gb|EEZ93777.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968] gi|288859162|emb|CBJ13091.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella longbeachae NSW150] Length = 218 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 L A R +GKG++R LR+ Q+PA+IYG P I + K L +++ Sbjct: 1 MSNILLEAQTRTDMGKGASRRLRRLENQVPAVIYGGDKKPTSIHFQHNKVIKALETESIY 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ + + ++ HVI K Q P +++H D +VS+ + VP+ FINE K+PGI Sbjct: 61 SSVFDITVDGKVEHVILKALQRHPYKPVVMHMDLQRVSKTDVLVKLVPIHFINEEKAPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----- 176 K GG +N +V + C A ++P+ I VD++++K+ D +H+ ++LP+ Sbjct: 121 KAGGIINHTMTQVEVRCQAKDLPEFINVDMSEVKVDDIVHLSHLKLPKGVQLTVDVTDGS 180 Query: 177 LNITIATIVAPISGS 191 + + +I P + Sbjct: 181 HDAPVVSIHMPKVSA 195 >gi|239817313|ref|YP_002946223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] gi|259646698|sp|C5CYZ6|RL25_VARPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239803890|gb|ACS20957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus S110] Length = 224 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 3/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR +G+ P I+YG P+ I L + L + F ++IL Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++G V+ +D Q P ++ H DF +V + + + VP+ + E +S +K Sbjct: 61 EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 + V E+ + C ++P+ I VDL+ LK ++H+ DI+LP+ +S LN I Sbjct: 121 NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVIV 180 Query: 183 TIVAP 187 + V P Sbjct: 181 SAVPP 185 >gi|167036980|ref|YP_001664558.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039691|ref|YP_001662676.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter sp. X514] gi|256750623|ref|ZP_05491509.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300915060|ref|ZP_07132375.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307724983|ref|YP_003904734.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|320115398|ref|YP_004185557.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226736371|sp|B0K775|RL25_THEP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736372|sp|B0K664|RL25_THEPX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166853931|gb|ABY92340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X514] gi|166855814|gb|ABY94222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750463|gb|EEU63481.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus CCSD1] gi|300888784|gb|EFK83931.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X561] gi|307582044|gb|ADN55443.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter sp. X513] gi|319928489|gb|ADV79174.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 201 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG + P+A+ + + K+ Sbjct: 1 MQSVSIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNKLQRL-LQKHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGTGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 118 -RGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia ruminantium str. Welgevonden] gi|68053024|sp|Q5FFA2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68053028|sp|Q5HC84|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden] Length = 208 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + K++A +R+ VG G +R LR+NG IPA++YG P I LS ++ + S Sbjct: 1 MTDQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T ++ L+IG++ +V+ +D Q PV+D + H DF + G+ + + VP+ F+NE + Sbjct: 61 LSTHLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLN 178 G+K+GG LN++ + + C N I SI VDL +L IG SIH+ D+ LP + + + + N Sbjct: 121 GVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHN 180 Query: 179 ITIATIV 185 T+ TI Sbjct: 181 PTLVTIS 187 >gi|46201115|ref|ZP_00055742.2| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 202 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++A +RD GKG+AR R+ G++P +IYG+ I + + + ++ F Sbjct: 1 MS-EAIAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGF 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T + +D+GK+ + +D Q+ PVSD IH DF++VS + V VPV F NE KSP Sbjct: 60 FTQLFNVDLGKDGKHLCLARDVQMHPVSDQPIHVDFMRVSADHAIHVKVPVHFTNEAKSP 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLN 178 GIK+GG LNV HE+ + C +IP I +DL+ ++IG S+H++D++LP Sbjct: 120 GIKKGGVLNVELHEIEITCSPEDIPHEILIDLDGMEIGASVHLKDLKLPAGAKPYHVASG 179 Query: 179 ITIATIVAP 187 T+A+I AP Sbjct: 180 ATVASIAAP 188 >gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] gi|172047325|sp|A5EWV0|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A] Length = 225 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 8/190 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L AV+R++ GKG++R LR+ G +PAIIYG ++P+ IA+ ++ K + +F + I+ Sbjct: 8 YTLHAVVREEQGKGASRRLRRQGLVPAIIYGGNTEPQAIAIKQDELKKNAKNHSFFSQII 67 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L I G+E ++ +D Q + H DF ++ G +T V + F+ E ++PGIK Sbjct: 68 NLKIDGQEDQEILVRDVQHHIYKPLFQHFDFQRIVRGQEITATVLLEFVGEERAPGIKTD 127 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN----- 178 GG ++ V ++C + +P+ I VDL++ IGD I + D++LPE + + Sbjct: 128 GGIVSRHMTTVEVICRPSLLPEYIAVDLSEANIGDIITLADLKLPEGVRLVGDMEDEEFA 187 Query: 179 -ITIATIVAP 187 + I P Sbjct: 188 ATVVVQISYP 197 >gi|289578962|ref|YP_003477589.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] gi|289528675|gb|ADD03027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter italicus Ab9] Length = 202 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+K G IP I+YG + P+A+ + ++ Sbjct: 1 MQSVSIEAIKRD-TGKNAARRLKKQGYIPGILYGKDMTENIPLAVEYNKFQRL-LQQHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKFEGIGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 118 -KGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|187922591|ref|YP_001894233.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phytofirmans PsJN] gi|226736292|sp|B2SXG4|RL25_BURPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187713785|gb|ACD15009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phytofirmans PsJN] Length = 206 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG ++ + + L + L + F ++IL Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQESNPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C + +P+ + VDL ++ G S+H +DI+LP S ++ N + Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVSLVAHVEAENPVV 180 Query: 182 ATIVAP 187 A P Sbjct: 181 AAATIP 186 >gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium populi BJ001] gi|226736337|sp|B1Z970|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium populi BJ001] Length = 228 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 117/188 (62%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F Sbjct: 1 MS-ATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPEAIAVDLIRTRTLIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ + +G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+N+ K+PG Sbjct: 60 KTTLFDITVGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNDEKAPG 119 Query: 121 I-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 I ++GG LNV H VSL + IPD+I VDL +IGD IH D+RLP + + Sbjct: 120 IKQKGGTLNVALHTVSLDVAPDQIPDAIEVDLTGREIGDVIHASDLRLPAG-TYTGEPTD 178 Query: 180 TIATIVAP 187 T+A I+ P Sbjct: 179 TVANILPP 186 >gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS] Length = 205 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 2/179 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 1 MKVIAYTRAEIGTGASRRLRAAGMAPGIVYGGTSEPVNIKLDHNALFYALKREAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ +D+Q+ +++H DF +V +TV VP+ FINE+ SP + G Sbjct: 61 DLEIDGKAEKVLLRDFQVHAYKPLVLHVDFQRVDANQKITVKVPLHFINEDASPA-AKSG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIAT 183 ++ E+ + C N+P I VDL +L +G +IH+ D++LPE S+ + I + Sbjct: 120 VVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKLPEGVSATSHDESQPIVS 178 >gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25/general stress protein Ctc [Dechloromonas aromatica RCB] gi|109893357|sp|Q479M1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB] Length = 203 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 1/173 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L+A R G G++R LR ++P I+YG + P+ I + D+ +L + F ++I Sbjct: 2 QFELNAQARTLQGTGASRRLRHAAKVPGIVYGGAAAPQSIEVDHNDLLLKLKKEAFHSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L I + V+ +D Q+ +++H DF +V + V VP+ F+NE +PG+K Sbjct: 62 INLIIDGKKEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFVNEEVAPGVKLN 121 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G +N V EV + C A ++P+ I VDL+ LKIG SIH+ ++LP+ + Sbjct: 122 GGLVNHVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPKGVKIVHH 174 >gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13] Length = 209 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 2/178 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R LR G P I+YG S+P I L + L + F ++IL Sbjct: 1 MKIIAYTRAEIGSGASRRLRAAGMAPGIVYGGNSEPLNIKLDHNALFYALKREAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + V+ +D+Q+ +++H DF +V + V VP+ F+N + K+ G Sbjct: 61 DLEIDGKNQQVLLRDFQVHAYKPVVLHVDFQRVDANQKINVKVPLHFVN-EDASSAKKSG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIA 182 ++ E+ + C N+P I VDL +L+IG +IH+ D++LPE +++ ++ I Sbjct: 120 VVHHAVTELEISCLPANLPAFIEVDLGNLEIGQTIHLGDLKLPEGVTAISHDESMPIV 177 >gi|224823793|ref|ZP_03696902.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] gi|224604248|gb|EEG10422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lutiella nitroferrum 2002] Length = 192 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R+++G ++R LR G++PA++YG ++ + L + L + F T I Sbjct: 2 SYELIAAKREQLGTSASRRLRHAGKLPAVVYGANTEAVSVVLDHNPVYYALKEEGFHTGI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L L I E V+ +DYQ+ P +++H DF +V + V VP+ F+ + S +K Q Sbjct: 62 LNLVIDGEKQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLHFVGADASEAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 G K++ V EV + +P I VDL+ ++ G +IH+ D++LPE + Sbjct: 122 GAKISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKLPEGVEITA 173 >gi|330813694|ref|YP_004357933.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063] Length = 237 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 112/188 (59%), Gaps = 1/188 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ L A +R+ K + LR +G +P ++YG++ +A+ + K L NF Sbjct: 1 MENNLTSLEANIRETKTKSDIKKLRIDGFVPGVLYGDVETNFKLAVKKNALEKLLKIGNF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 M+T++ + + + V+P+D + + +++ IH DF ++S G+ V V +PV+FINE+ PG Sbjct: 61 MSTVIDIKVAGKEYKVLPRDIEFNKLTNQPIHVDFQKISAGTKVVVWIPVKFINESICPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNI 179 +K GG LN+V +V L CPA+ IP + DL + ++ +SIH+ I+LPE ++ + Sbjct: 121 LKMGGVLNIVRRKVELNCPADQIPAELVCDLGEKQLNESIHISSIKLPENVKPTILDRDF 180 Query: 180 TIATIVAP 187 TIAT+ AP Sbjct: 181 TIATVAAP 188 >gi|298368586|ref|ZP_06979904.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] gi|298282589|gb|EFI24076.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str. F0314] Length = 190 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 103/185 (55%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R++ G G++R LR+ GQIPAI+YG P I++ K I L ++F T + Sbjct: 2 SYEIQAAIREQQGTGASRRLRREGQIPAILYGEDQKPISISVDHKTIFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P + H DF V + + VP+ +N S +K Q Sbjct: 62 IKLALNGKTYDVIVRDFQMHPFRREVQHIDFQVVKANQLLRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L +NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|186475083|ref|YP_001856553.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia phymatum STM815] gi|226736291|sp|B2JCN8|RL25_BURP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|184191542|gb|ACC69507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia phymatum STM815] Length = 203 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R+ G G++R LR +G+ P I+YG +P+ I L + L + F ++IL Sbjct: 1 MKVVAFERNLQGTGASRRLRNSGKAPGIVYGAG-EPQLIELDHNALWHALKKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L++ + V+ +D Q P +++H DF +V + VP+ F+N+ +P +K G Sbjct: 60 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLGG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ V +E+ + C +P+ I VDL ++ G S+H DI LP + ++ N I Sbjct: 120 AIISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDIALPAGVALVAHLVAENPVI 179 Query: 182 ATIVAPISG 190 + P Sbjct: 180 VSAPIPAGA 188 >gi|269125253|ref|YP_003298623.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] gi|268310211|gb|ACY96585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermomonospora curvata DSM 43183] Length = 200 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG+AR R+ G++PA++YG+ + P+ I L D+ L + N + Sbjct: 1 MSEVRIAAEPRTEFGKGAARRTRRAGKVPAVLYGHGTPPQHITLPGHDLMLALKTPNVLL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G+E +PKD Q DP+ L H D L V G VTV VPV + + Sbjct: 61 RLEGLPGGEE--LALPKDVQRDPIKGFLEHVDLLLVKRGEKVTVEVPVVATGD-----VV 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L +V++ A +IP+++ VD++ L++GDS+ +D++LP + + I Sbjct: 114 AGGRLEQPVIQVAVEAEATHIPETVEVDVSGLQVGDSVLAKDLKLPSGVALAADEETLIL 173 Query: 183 TIV 185 I Sbjct: 174 QIA 176 >gi|77919599|ref|YP_357414.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter carbinolicus DSM 2380] gi|109893375|sp|Q3A313|RL25_PELCD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77545682|gb|ABA89244.1| LSU ribosomal protein L25P [Pelobacter carbinolicus DSM 2380] Length = 208 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L+ R+ +GKG+AR LR+ G IPA++YG + + + K ++ + S+ + Sbjct: 1 MAQTELNVSQREGLGKGTARSLRREGLIPAVMYGKGVENCSLVVEPKQLAAIIGSEAGLN 60 Query: 63 TILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++TL VI KD Q+DP+ +H DF + + V VP+ + KS G Sbjct: 61 SLITLKGEGAFDGKVVILKDMQVDPIRQTPLHVDFQAIDLNAKTHVLVPLVVV--GKSEG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 KQGG L ++ HEV L+C NIP +I VD+ L IGD++H++D++LPE +N T Sbjct: 119 EKQGGNLQIIRHEVELVCLPANIPANIEVDVTALNIGDALHVQDVQLPEGVEIPQDVNFT 178 Query: 181 IATIV 185 + T+ Sbjct: 179 VVTVT 183 >gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] gi|254801033|sp|B9KHC7|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida] Length = 218 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + + Sbjct: 6 TIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQL 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K G Sbjct: 66 IKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N +A+ Sbjct: 126 GALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVVAS 185 Query: 184 IVA 186 + A Sbjct: 186 VSA 188 >gi|158312637|ref|YP_001505145.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] gi|158108042|gb|ABW10239.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EAN1pec] Length = 208 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 5/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 1 MSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTL++ + +PK+ Q P+ H D + V+ G V+V V + I E + Sbjct: 61 VLLTLELSGQTELALPKEVQRHPIRGSYEHVDLVLVNRGEHVSVEVALVLIGEADPDTLV 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +S+ A ++PD I VD+ L+ G I + LP+ + + + Sbjct: 121 DQQVTA-----LSVKADAASLPDRIEVDITGLEAGHGITAAQLELPQGVELEADGELVVV 175 Query: 183 TIVAPI 188 +A Sbjct: 176 QGLAKR 181 >gi|326389777|ref|ZP_08211342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] gi|325994259|gb|EGD52686.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter ethanolicus JW 200] Length = 202 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG + P+A+ + + K+ Sbjct: 1 MQAISIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNALQRL-LQKHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGIGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 118 -RGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella petrii DSM 12804] gi|226736285|sp|A9I6W5|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii] Length = 207 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 61 QMQLDGKEEAVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFINGENSPAVKLSS 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 ++ V E+ + C +P I VDL +L G S+H+ D++LP+ + + S N + Sbjct: 121 AIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSDVKLPKGVTYVAHGSDANPVL 180 Query: 182 AT 183 A+ Sbjct: 181 AS 182 >gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. St. Maries] gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] gi|68053041|sp|Q5P9A5|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries] gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel] Length = 218 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + + Sbjct: 6 TIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQL 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K G Sbjct: 66 IKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N IA+ Sbjct: 126 GALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIAS 185 Query: 184 IVA 186 + A Sbjct: 186 VSA 188 >gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Mississippi] Length = 218 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + + Sbjct: 6 TIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQL 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K G Sbjct: 66 IKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N IA+ Sbjct: 126 GALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIAS 185 Query: 184 IVA 186 + A Sbjct: 186 VSA 188 >gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Magnetospirillum magnetotacticum MS-1] Length = 226 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F Sbjct: 1 MS-ATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQPPQSIAIDLIRTRTLIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ + +G + IP+D+QLDPVS + +H DFL+V G TVTV VPV F+NE+++PG Sbjct: 60 KTTLFEITVGGKKTRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNEDQAPG 119 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 IK+ G LNV H +SL + IPD++ +DL +IGD IH D+RLP S + Sbjct: 120 IKKKGGTLNVALHTLSLEVAPDQIPDAVEIDLAGREIGDVIHASDLRLPAG-SYTGEPTD 178 Query: 180 TIATIVAP 187 T+A I+ P Sbjct: 179 TVANILPP 186 >gi|163851898|ref|YP_001639941.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4] gi|226736336|sp|A9W5L4|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium extorquens PA1] gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens DM4] Length = 228 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 86/188 (45%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F Sbjct: 1 MS-ATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ +D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PG Sbjct: 60 KTTVFEIDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPG 119 Query: 121 I-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 I ++GG LNV H +SL + IPD+I VDL +IGD IH D+RLP + + Sbjct: 120 IKQKGGTLNVALHTLSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAG-TYTGEPTD 178 Query: 180 TIATIVAP 187 T+A ++ P Sbjct: 179 TVANLLPP 186 >gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia endosymbiont of Drosophila simulans] Length = 203 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q+E ++A +RD + LRK G IP IIYG D + LSAK+ +K+ S + Sbjct: 1 MTQQEIVTINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGS 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I + + + +D QL V D + H DF +GS + + +P+ F+NE+K+P Sbjct: 61 LSAHLIELNISGKKEYALVRDIQLHVVKDPVQHGDFQFDVKGSEIKIDIPLSFVNESKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QL 177 GIK GG LNV+C +++ C + IP I VDL+ IG SIH+ D++LPE ++ + Sbjct: 121 GIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEE 180 Query: 178 NITIATIVA 186 N TI TI A Sbjct: 181 NFTIVTISA 189 >gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Puerto Rico] gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma marginale str. Virginia] Length = 217 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R K G GSAR LR G IPA++YG D I+LS D K+ + + + Sbjct: 6 TIRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQL 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L I + + K+ Q PVS + H DF V G+ + V VP+ F+NE K G+K G Sbjct: 66 IKLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLG 125 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITIAT 183 G LN++ + + C + IP S+ VDL DL IG SIH+ D+ LPE M + N IA+ Sbjct: 126 GALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIAS 185 Query: 184 IVA 186 + A Sbjct: 186 VSA 188 >gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc [Methylobacterium chloromethanicum CM4] gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] gi|254801054|sp|B7KNU8|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium chloromethanicum CM4] gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC) [Methylobacterium extorquens AM1] Length = 228 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F Sbjct: 1 MS-ATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ +D G + IP+DYQLDPVS + +H DFL+V G TVTV VPV F+NE+++PG Sbjct: 60 KTTVFEIDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPG 119 Query: 121 I-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 I ++GG LNV H VSL + IPD+I VDL +IGD IH D+RLP + + Sbjct: 120 IKQKGGTLNVALHTVSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAG-TYTGEPTD 178 Query: 180 TIATIVAP 187 T+A ++ P Sbjct: 179 TVANLLPP 186 >gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax ferrireducens T118] gi|109893386|sp|Q21XW2|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118] Length = 223 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 100/183 (54%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG ++P+ I + + L + F +L Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGGAEPQQIEIDHNALWHALKKEAFHAAVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + + SP +K +G Sbjct: 61 DMELDGKDNKVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLHYSGDENSPAVKTEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 N V E+ +LC ++P+ I VDL+ LK G S+H+ D+ LP+ ++++ N + Sbjct: 121 CIANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVALPKGVTAVTRGNKNPVLV 180 Query: 183 TIV 185 ++V Sbjct: 181 SVV 183 >gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum] Length = 191 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 6/193 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL +RD GKG AR LR++G +PA++YG+ + ++ KD+ K + Sbjct: 1 MEHSKLKVSVRDSTGKGVARTLRRSGHVPAVVYGSGK-AQSLSALLKDVEKAIQGHAGRN 59 Query: 63 TILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + L+I + +D Q DP++ ++H DFL+VSE + V VPV I + Sbjct: 60 GLFDLEISGGNSSRTALTLVRDIQRDPITGKILHVDFLEVSEKARVKNRVPVEVIGSS-P 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+VV E+ + C + +PD I VD + L I ++H+ D+ LP + + N Sbjct: 119 EGVKKGGILDVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPGVTVLDDPN 178 Query: 179 ITIATIVAPISGS 191 I ++ P + + Sbjct: 179 TVILHVIPPKAEA 191 >gi|291298815|ref|YP_003510093.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] gi|290568035|gb|ADD41000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Stackebrandtia nassauensis DSM 44728] Length = 205 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++SA R + GKG AR R+ G+IPA++YG+ PK ++L A++ + + Sbjct: 1 MSEVRISAEPRTEFGKGGARRTRRAGKIPAVLYGHGEKPKHLSLPAREFAAVIRRGGLNQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +PK Q DP+ D + H D L V +G VTV V + F E + G+ Sbjct: 61 LVSVEITDGTTELALPKALQRDPIKDTIEHVDLLLVRKGEKVTVEVRIDFTGEPEKGGL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + +++ A IP+S+ + + +++G +I + LP T+ +S + Sbjct: 120 ----IVHNLDTLTVEADATAIPESVELSIEGMEVGSNITAAAVNLPSGTTLVSDPETVLV 175 Query: 183 TIVAPISGS 191 T P + + Sbjct: 176 THTQPRAEA 184 >gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus marinus DSM 4252] Length = 202 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 6/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R+ GK +AR +R+ G +P I+YG+ +P P + + R T Sbjct: 1 MATITIEAKPRE-TGKRAARAIRREGWVPCILYGHHVEPIPFQML--ESKLRPLIYTTET 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L + + I KD + PV+D +HADF + VTV VPV+ + + G++ Sbjct: 58 HLVKLQLNGKTWDCILKDVEFHPVTDRPLHADFQVLRAEEKVTVTVPVQIV--GTAIGVQ 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V HE+ + C +IP I +D+++L IGD+IH+ D++ E + T+ Sbjct: 116 RGGVLQIVTHELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQF-EGLEFEDAPDQTVV 174 Query: 183 TIVAP 187 I AP Sbjct: 175 VIAAP 179 >gi|297545174|ref|YP_003677476.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842949|gb|ADH61465.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 202 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + + A+ RD +GK SAR L+K G IP I+YG + P+A+ + ++ Sbjct: 1 MQSVSIEAIKRD-IGKNSARRLKKQGYIPGILYGKDMTENIPLAVEYNKFQRL-LQQHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLFNVIVDGSTHNAVVKEIQEDTLKGKIIHIDFQRVSMHEEIEATVPLKFEGIGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI++PE + + + Sbjct: 118 -KGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFVKDIQVPEGVKVIDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|240013762|ref|ZP_04720675.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI18] gi|240120830|ref|ZP_04733792.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID24-1] gi|293399412|ref|ZP_06643565.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] gi|291609981|gb|EFF39103.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62] Length = 190 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|284046684|ref|YP_003397024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] gi|283950905|gb|ADB53649.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter woesei DSM 14684] Length = 218 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L+ R+ G + R LR++G +P I+YG +DP P + A+++ L Sbjct: 1 MAAEETTLTVAPREIEGSRATRRLRRSGLVPGIVYGGDADPLPFQVDARELRNALAHGG- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + V+ KD+ PV+ ++H D L+V + V V IN + +PG Sbjct: 60 --AVIQLTLDGAQTPVVLKDHHRHPVNGNMLHVDLLRVDLTQRIHATVVVEVINADDAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK GG L V E+++ N IPD+I +D++ +++GD++++ + P + + L T Sbjct: 118 IKGGGVLEQVTREINIEALPNEIPDTIELDVSSVEVGDTVYLSALTPPSGVALLDDLEET 177 Query: 181 I-ATIVAPI 188 + +++AP Sbjct: 178 VLVSVLAPK 186 >gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella avium 197N] gi|109893346|sp|Q2KYA2|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N] Length = 198 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIFHALRKEQFHASIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 T+ + G V+ + Q P ++H DF +V + VP+ F+N SP +K Sbjct: 61 TMALEGGANEQVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFVNAETSPAVKLS 120 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN-ITIA 182 ++ V EV + C ++P I VDL +L G SIH +DI LP+ + + I Sbjct: 121 GAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPKGVTFTHPNDEQVIV 180 Query: 183 TIVAPISG 190 + V G Sbjct: 181 SAVV-KGG 187 >gi|261380302|ref|ZP_05984875.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] gi|284796815|gb|EFC52162.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703] Length = 190 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium cellulosum 'So ce 56'] gi|189042374|sp|A9GXJ8|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum 'So ce 56'] Length = 229 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 KL+A R+ GK ++ LR+ GQIPAI YG P+ +A+S K + + L S + Sbjct: 1 MDIIKLNATRREDSGKSASSRLRRAGQIPAIAYGRELAPQSVAISPKALLQVLGSDHGKN 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ L I + + V+ +DY P+S L+HADF+QV V V +P R + K G+ Sbjct: 61 SVVELAIENGQTLTVMVRDYDYHPISRELVHADFIQVKLDQPVDVQIPFRCV--GKPKGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG L + + + C IP I +D+ +L +GDS ++LPE ++ + TI Sbjct: 119 VTGGVLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKASGLKLPEGVKTLLADDQTI 178 Query: 182 ATIVAP-ISG 190 A + AP +G Sbjct: 179 AVVNAPEKAG 188 >gi|288921322|ref|ZP_06415604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] gi|288347296|gb|EFC81591.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia sp. EUN1f] Length = 209 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG AR R+ G++PA++YG+ P+ IAL A D+ + Sbjct: 1 MSEVRIAAEPRTEFGKGGARRTRRAGKVPAVLYGHGQPPRHIALPAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTL++ +PK+ Q P+ H D + V+ G VTV V + I + + Sbjct: 61 VLLTLELSGGTELALPKEVQRHPIRGSYEHVDLVLVNRGERVTVEVALILIGDAHPDTLV 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +++ A ++P +I VD+ L+ G I + LP + + I Sbjct: 121 DQQVTA-----LAVKADATSLPSTIEVDITGLEPGHGIAASQLELPRGVELEADAELVIV 175 Query: 183 TIVAPISGS 191 +A + + Sbjct: 176 QGLAKKTAA 184 >gi|196229514|ref|ZP_03128379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] gi|196226746|gb|EDY21251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chthoniobacter flavus Ellin428] Length = 281 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 97/190 (51%), Gaps = 5/190 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K+ KL+A+ R + G+ + +++ G +PA++YG P ++++A++I L Sbjct: 1 MAKQQKLTALTRTETGRSAVNKIKQQGLVPAVVYGGKEQPINLSVNAREIRNILAHATSE 60 Query: 62 TTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L+I K + ++ Q DP+ ++H DF V + +PV + E Sbjct: 61 HFLVDLEIADGSNKSNRLALVQEVQHDPLKGDVLHVDFHAVKADEKLHAEIPVETVGEPA 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GG L + H + + C ++P+ IT+D++ L +G+ IH++DI+ PE ++ Sbjct: 121 GV-KNYGGILEISMHAIEVECLPKDLPEIITLDVSALNVGEGIHIKDIKFPEGVTTHVDG 179 Query: 178 NITIATIVAP 187 +T+ + AP Sbjct: 180 ELTVVRVSAP 189 >gi|315185672|gb|EFU19440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta thermophila DSM 6578] Length = 209 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 105/183 (57%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ KL+A++R K A+ LR+ G+IPA+IYG D P+AL A++ + + Sbjct: 1 MKKTKLTAIVRTAQKKTEAKALRREGKIPAVIYG-GKDQVPVALDAREFHRTFHGTVAEN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ G+ Sbjct: 60 VIVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHLE--GTPEGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C ++P++I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEAIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTV 177 Query: 182 ATI 184 + Sbjct: 178 VAV 180 >gi|170750343|ref|YP_001756603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] gi|226736338|sp|B1LZ78|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacterium radiotolerans JCM 2831] Length = 227 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 84/182 (46%), Positives = 117/182 (64%), Gaps = 2/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L AV RD+VGKG+AR +R+ GQIPA+IYG P+ IA+ +Y+ F TT+ Sbjct: 6 TLEAVARDRVGKGAARAVRRQGQIPAVIYGGGQPPQSIAVDLIRTRTLIYAGGFKTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-GG 125 ++ G + V IP+D+QLDPV+ + +H DFL+V G TVTV VPV F+NE+ +PGIK+ GG Sbjct: 66 INAGGKKVRAIPRDFQLDPVTGVPLHVDFLRVVSGQTVTVEVPVHFVNEDAAPGIKKLGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 LN+V H +SL + IPD+I VDL IGD IH+ DI++P + + +A IV Sbjct: 126 TLNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDVIHVSDIKIPAG-TYTGEATDPVANIV 184 Query: 186 AP 187 P Sbjct: 185 PP 186 >gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis Z2491] gi|71153153|sp|Q9JUX7|RL25_NEIMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121051996|emb|CAM08305.1| hypothetical protein NMA1094 [Neisseria meningitidis Z2491] gi|319410237|emb|CBY90577.1| 50S ribosomal protein L25 [Neisseria meningitidis WUE 2594] Length = 190 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|297193932|ref|ZP_06911330.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] gi|197720295|gb|EDY64203.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces pristinaespiralis ATCC 25486] Length = 198 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N Sbjct: 1 MSEVKLTAERRSEFGKGAARRIRRDNKVPGVLYGHGTDPVHVTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++LD+G IPK Q DP+ L H D L V G V+V +PV + Sbjct: 58 VLISLDLGGTSELAIPKAVQRDPLKGFLEHVDLLLVKRGEKVSVDIPVHTEGDLAPGAFL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + V + + + A +IP+S+TV + L GDS+ +DI LP+ T+ + + + Sbjct: 118 ----VEHVLNALPVEAEATHIPESVTVSIEGLSAGDSVLAKDITLPKGTTLTVEDDTVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|254804741|ref|YP_003082962.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|261400188|ref|ZP_05986313.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296313504|ref|ZP_06863445.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|313668661|ref|YP_004048945.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica ST-640] gi|254668283|emb|CBA05191.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14] gi|269210188|gb|EEZ76643.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970] gi|296839947|gb|EFH23885.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC 43768] gi|309379435|emb|CBX22002.1| 50S ribosomal protein L25 [Neisseria lactamica Y92-1009] gi|313006123|emb|CBN87584.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria lactamica 020-06] gi|325127982|gb|EGC50881.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis N1568] gi|325133985|gb|EGC56640.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13399] Length = 190 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia chaffeensis str. Arkansas] gi|109893362|sp|Q2GHW3|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia chaffeensis str. Arkansas] Length = 210 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 1/181 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++A +R VG G +R LR +G+IPA+IYG D I+LS ++ + S T ++ Sbjct: 7 VKINASLRKNVGTGPSRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLI 66 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+I + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K GIK+GG Sbjct: 67 ELEIDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATI 184 LN++ +S+ C I +I +DL+ L G SIH+ D++LP + + +M + N I TI Sbjct: 127 VLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTI 186 Query: 185 V 185 Sbjct: 187 S 187 >gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1] Length = 208 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 108/186 (58%), Gaps = 2/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + A +R+ G+ + R LR+ G+IPAIIYG +A+ ISK L + F T Sbjct: 1 MSDFIVEAELRETNGRSATRRLRRTGKIPAIIYGGDKPDLSVAVDYFVISKLLNQEEFHT 60 Query: 63 TILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++L + + + V+ K Q DP+ D + H DF++VS +T+ VPV INE+K PG Sbjct: 61 SMLEVKVKGSRGKNTVMLKATQWDPIKDTVTHLDFIRVSSSDMITLDVPVVAINEDKCPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +GG ++V+ H + + A++IP I +D + L IGDS+H+ED+ LPE ++N T Sbjct: 121 VAKGGLIDVIRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIEDVTLPEGAVVHHEVNFT 180 Query: 181 IATIVA 186 + + A Sbjct: 181 VLNVAA 186 >gi|218781214|ref|YP_002432532.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfatibacillum alkenivorans AK-01] gi|226736306|sp|B8FLB8|RL25_DESAA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218762598|gb|ACL05064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfatibacillum alkenivorans AK-01] Length = 218 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 4/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L A R G G AR LR+ G IPA++YG S+P +++S KD+S L Sbjct: 1 MKTHELKASPRTTRGNGPARALRREGFIPAVLYGPDSEPITLSVSHKDLSDILQGVGSSQ 60 Query: 63 TILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+I + K+ Q + VS +HADF ++S + V VPV + E KS G Sbjct: 61 VMFNLNIEGADAPRKAMIKELQTNVVSQRYLHADFYEISMDRKLHVMVPV--VVEGKSKG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V+ E+ ++C +IP+ +D+ +L IG+++H+ D+ + + T Sbjct: 119 MEEGGLLQVIRRELEVICLPGDIPEEFVIDVTELGIGEAVHLSDVPKGDAVEFPESADFT 178 Query: 181 IATIVAPISGS 191 + T+VAP + + Sbjct: 179 VVTVVAPTAAA 189 >gi|121634651|ref|YP_974896.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis FAM18] gi|166223696|sp|A1KTB7|RL25_NEIMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120866357|emb|CAM10100.1| hypothetical protein NMC0817 [Neisseria meningitidis FAM18] gi|254673308|emb|CBA08446.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha275] gi|325132289|gb|EGC54982.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M6190] gi|325142126|gb|EGC64551.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 961-5945] gi|325144239|gb|EGC66545.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240013] Length = 190 Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|240127840|ref|ZP_04740501.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-93-1035] gi|268686237|ref|ZP_06153099.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] gi|268626521|gb|EEZ58921.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035] Length = 190 Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSMLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|296271108|ref|YP_003653740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] gi|296093895|gb|ADG89847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobispora bispora DSM 43833] Length = 190 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++A R GKG+AR LR+ G++PA++YG+ ++PK + L D+ L + N Sbjct: 1 MSEVVINAEPRTAFGKGAARKLRRGGKVPAVLYGHGTEPKHLTLPGHDLLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +PK Q DP+ L H D L+V G VTV +PV + Sbjct: 58 VLIRLKGDGIDEIALPKGVQRDPIKGFLQHVDLLRVHRGEKVTVELPVTVTGDPIGSA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + V + A +IP+S+ VD+ +G ++H D+ LPE S + + Sbjct: 116 ---IVEQLLVAVPVEAEATHIPESVEVDVTGKDVGFTVHARDLALPEGVSLAGDPDALVL 172 Query: 183 TIV 185 ++ Sbjct: 173 HVI 175 >gi|319638120|ref|ZP_07992883.1| 50S ribosomal protein L25 [Neisseria mucosa C102] gi|317400393|gb|EFV81051.1| 50S ribosomal protein L25 [Neisseria mucosa C102] Length = 190 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGEAKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVIALPANIPAFLELDCTSVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax paradoxus EPS] gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax paradoxus EPS] Length = 223 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 K A R K G G++R LR +G+ P I+YG P+ I + + L + F ++I Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGLQPQLIEIDHNALWHALKKEAFHSSI 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L +++G V+ +D Q P ++ H DF +V + + + VP+ F E +S +K Sbjct: 61 LEMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLHFKGEEESEAVKTA 120 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITI 181 +N V E+ + C +++P+ I VDL+ L ++H+ DI+LP+ +S N I Sbjct: 121 HNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKGVKYVSHGKQNPVI 180 Query: 182 ATIVAP 187 + V P Sbjct: 181 VSAVPP 186 >gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA 1090] gi|194098189|ref|YP_002001237.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae NCCP11945] gi|239998640|ref|ZP_04718564.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae 35/02] gi|240016200|ref|ZP_04722740.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA6140] gi|240115294|ref|ZP_04729356.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID18] gi|240123136|ref|ZP_04736092.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID332] gi|240125385|ref|ZP_04738271.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae SK-92-679] gi|254493356|ref|ZP_05106527.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|260440889|ref|ZP_05794705.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|268594494|ref|ZP_06128661.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268600974|ref|ZP_06135141.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268681764|ref|ZP_06148626.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268683986|ref|ZP_06150848.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291044213|ref|ZP_06569922.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|68053023|sp|Q5F9F4|RL25_NEIG1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736341|sp|B4RKF2|RL25_NEIG2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|59717778|gb|AAW89183.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933479|gb|ACF29303.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae NCCP11945] gi|226512396|gb|EEH61741.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291] gi|268547883|gb|EEZ43301.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02] gi|268585105|gb|EEZ49781.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18] gi|268622048|gb|EEZ54448.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332] gi|268624270|gb|EEZ56670.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679] gi|291011107|gb|EFE03103.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae DGI2] gi|317163911|gb|ADV07452.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae TCDC-NG08107] Length = 190 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|240080344|ref|ZP_04724887.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae FA19] gi|268596490|ref|ZP_06130657.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] gi|268550278|gb|EEZ45297.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19] Length = 190 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +ATI Sbjct: 182 VATIT 186 >gi|319945392|ref|ZP_08019653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] gi|319741385|gb|EFV93811.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia mirabilis ATCC 51599] Length = 215 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++SA R VG ++R LR+ Q+P I+YG + P +AL + L + F ++IL Sbjct: 1 MQISAQERKDVGTSASRRLRRANQVPGIVYGGEAAPIQVALDHNTLYHALRVEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +DI + V+ ++ Q P ++H DF +V+ +TV VP+ FIN SP +KQ Sbjct: 61 DMDIDGKKQRVLLRNVQWHPYKQQVLHVDFQRVAANQKITVKVPLHFINGENSPAVKQTK 120 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIA 182 +N V E+ + ++P+ I VDL +L + SIH+ I+LP+ +++ + +A Sbjct: 121 AVVNHVMTEIEVQVLPKDLPEFIEVDLAELAMEHSIHLSSIKLPKGVTAVVAPGTDPVLA 180 Query: 183 T 183 + Sbjct: 181 S 181 >gi|254388783|ref|ZP_05004015.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294813076|ref|ZP_06771719.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|197702502|gb|EDY48314.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] gi|294325675|gb|EFG07318.1| 50S ribosomal protein L25 [Streptomyces clavuligerus ATCC 27064] Length = 195 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N Sbjct: 1 MHMSEVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L+LDI IPK Q D + L+H D L V G VTV VPV+ E G Sbjct: 60 --VLLSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGELAPGG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 V + + A +IP ++TV + L GD+IH +DI LP+ + Sbjct: 118 ----NLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPKGVELAVDADAV 173 Query: 181 IATIV 185 + ++ Sbjct: 174 VIQVL 178 >gi|255065136|ref|ZP_05316991.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] gi|255050557|gb|EET46021.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256] Length = 190 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAYLDLDCTKVVAGDILHLSDIQLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus xanthus DK 1622] gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus xanthus DK 1622] Length = 220 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M L A R+ GKG AR LR G IPA++YG + P I+++ K + + + + + Sbjct: 1 MSVNTSTLEAKPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHISVNPKAVRQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ + + V+ KDYQ+DPV+ ++HADFL V V V+VP+ ++ Sbjct: 61 KFNTLIQIKVEGGDRQVLLKDYQMDPVTRAILHADFLDVRPTDKVKVNVPLVL--SGRAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L E+ + IP+ I VD+ +KI + +H+ D++LPE S + +N Sbjct: 119 GVADGGLLTQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHINDLKLPEGVSVKTNVNY 178 Query: 180 TIATIVAPIS 189 T+A I AP + Sbjct: 179 TLAVISAPEA 188 >gi|261379039|ref|ZP_05983612.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] gi|269144490|gb|EEZ70908.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685] Length = 190 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|291439151|ref|ZP_06578541.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] gi|291342046|gb|EFE69002.1| ribosomal L25p family protein [Streptomyces ghanaensis ATCC 14672] Length = 195 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N Sbjct: 1 MNMADVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L GKE IPK Q DP+ L H D L+V G V V +PV+ E G Sbjct: 61 LIEL--LIDGKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGELAPGG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 L V + + A IPD +TV + L+ G S+ +DI LPE + Sbjct: 119 ----NLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPEGVKLAVDEDAV 174 Query: 181 IATIV 185 + ++ Sbjct: 175 VLQVL 179 >gi|197120548|ref|YP_002132499.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. K] gi|226736277|sp|B4ULC3|RL25_ANASK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|196170397|gb|ACG71370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. K] Length = 240 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + Sbjct: 1 MAENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+L L + HV+ KDY +DPV+ L+HADFL+VS V V VPV + G+ Sbjct: 61 TLLELQVDGASKHVLFKDYTVDPVTRKLLHADFLEVSLDQPVRVEVPVATVGRAA--GVA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+V HEV + N IP I VD+ +LKIG S+H+ +++ PE Q + + Sbjct: 119 EGGILSVATHEVVVEALPNKIPVRIEVDVTELKIGRSLHVSELKPPEGCKFKFQTDYVVV 178 Query: 183 TIVAP 187 + P Sbjct: 179 FVAVP 183 >gi|332671546|ref|YP_004454554.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] gi|332340584|gb|AEE47167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas fimi ATCC 484] Length = 207 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL A R + GKG+AR LR+ Q+PA++YG+ SDP ++L + + N Sbjct: 1 MSEVKLVATARTEFGKGAARRLRRAHQVPAVLYGHGSDPLHVSLPGHETMLAVKHAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ + I KD Q++PV +++ H D L V +G V V VPV E+ + Sbjct: 58 ALFEIELEGKTTLAIAKDVQIEPVRNVIEHVDLLIVKKGEKVAVEVPVHVQGESAPGTL- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V +SL A ++P+++ VD+ L+ G +H D+ LP+ + ++ + Sbjct: 117 ----HVVETQALSLEAEATHLPENVVVDIAGLEAGAIVHAGDVTLPKGATLLTDAETIVV 172 Query: 183 TIVAP 187 T+ P Sbjct: 173 TVSLP 177 >gi|119715156|ref|YP_922121.1| 50S ribosomal protein L25P [Nocardioides sp. JS614] gi|119535817|gb|ABL80434.1| LSU ribosomal protein L25P [Nocardioides sp. JS614] Length = 223 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+ A R + GKG+AR +R+ ++PA++YG+ +DP + L + L Sbjct: 1 MSE-KIKAEARTEFGKGAARRIRRADKVPAVVYGHGNDPVHLTLPGHETMMALKH-GGAN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + + K Q+DP+ L H DF+ V G VTV VPV + + + Sbjct: 59 ALLELDIDGKSQLALTKQVQIDPIKRHLEHIDFVAVKRGEKVTVEVPVHLVGDAARETL- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + L A +IP+ I V + + G IH D+ +P ++ + I Sbjct: 118 ----VVTETATIQLEAEATHIPEHIEVSIEGAEAGTQIHASDLTIPSGSTLLLDPETLIV 173 Query: 183 TIV 185 + Sbjct: 174 NVT 176 >gi|29830106|ref|NP_824740.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces avermitilis MA-4680] gi|71153666|sp|Q82HE6|RL25_STRAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29607216|dbj|BAC71275.1| putative ribosomal protein L25 [Streptomyces avermitilis MA-4680] Length = 197 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R+ ++PA++YG+ ++P I L ++ L + N Sbjct: 1 MSEVKLAAEPRTEFGKGAARRIRRESKVPAVVYGHGAEPVHITLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI + IPK Q D + L H D L V G V V V V + Sbjct: 58 VLLSLDIEGKAQLAIPKAVQRDAIKGFLEHVDLLLVRSGEKVNVEVYVHTEGDLAPGAYL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V +++ A +IP+S+TV + L+ G SI +DI LP T+ + + Sbjct: 118 LE----HVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPSGTTLAIDEDAVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|302338328|ref|YP_003803534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] gi|301635513|gb|ADK80940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta smaragdinae DSM 11293] Length = 209 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 108/186 (58%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R ++ KG+AR LR+ G+IPAIIYG+ S+P PI++ A + K+ + + Sbjct: 1 MEQKTLTGFARTELKKGAARRLRREGKIPAIIYGH-SEPVPISVPANEFEKKYSDLS-ES 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+T+ +G + V+ KDYQ + + + H DF ++ G + HVP+ + + G+K Sbjct: 59 TIITISVGGKEYDVLIKDYQENTMRGEVTHLDFFEIERGKKLKTHVPLHAV--GTAQGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + HE+ + C +IP + +++ + IGDS H+ D+ +PE + + ++ A Sbjct: 117 EGGILELGFHEIEIECLPKDIPSHLEINIEGMAIGDSRHISDMSVPEGVTVLVSTDMVAA 176 Query: 183 TIVAPI 188 +I P Sbjct: 177 SITTPK 182 >gi|88800290|ref|ZP_01115857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] gi|88777005|gb|EAR08213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp. MED297] Length = 208 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD--PKPIALSAKDISKRLYSKN 59 +L+AV+R++ GKG++R LR+ ++PA+IYG + P+ + L +++ K + ++ Sbjct: 1 MSTIYELNAVLREEHGKGASRRLRREKKVPAVIYGGAKNRKPQSLTLELRELVKAMENEA 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + +LT++IG + I D Q P +D +H D +V++ + V VP+ F+ E K Sbjct: 61 FFSHVLTINIGDKSEQAILMDVQRHPATDFPMHIDLERVTKSTVVHKKVPIHFVGEEKVE 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----- 174 K G K +E+ + C ++P+ I VD+ L++G +H+ +++LP+ S + Sbjct: 121 --KSGAKALHAANELEITCKVGDLPEFIEVDVAALEVGAVLHLSELKLPKGVSLVELNKG 178 Query: 175 SQLNITIATIV 185 + + +IV Sbjct: 179 EDHDSPVVSIV 189 >gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli] Length = 237 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 6/194 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 +L+A R G G++R LR+ ++PAI+YG P PI+L + + L ++ F Sbjct: 4 TNHSFELTAQTRKMFGSGASRRLRRLENRVPAILYGASEPPLPISLEHNQVLRALENEAF 63 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ILT++I + KD Q ++H D +VS +T+ VP+ F E ++PG Sbjct: 64 YSHILTINIEGTEQKAVLKDLQRHAYKPYILHMDLQRVSAKEKITMSVPLHFKGETEAPG 123 Query: 121 I-KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----S 175 + +GG L + V + C ++P+ + VD++ L++ +SI + + LPE Sbjct: 124 VKDEGGVLTKLLTSVEVRCLPVSLPEYLEVDVSKLRLDESISLSQLHLPEGVELTAAISH 183 Query: 176 QLNITIATIVAPIS 189 + + + I P + Sbjct: 184 EEDRPLVNIHIPRA 197 >gi|307718726|ref|YP_003874258.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] gi|306532451|gb|ADN01985.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192] Length = 209 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 4/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ KL+A++R K A+ LR+ G+IP ++YG D P+AL A++ + + Sbjct: 1 MKKTKLTAIVRTAQKKTEAKALRREGKIPGVVYG-GKDQVPVALDAREFHRTFHGTVAEN 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I+ L + GKE V+ KDYQ DP+ IH DF++++ + HVP+ G+ Sbjct: 60 VIVDLSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHLE--GTPEGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L E+ + C ++P+ I +D++ L++GDS+H++DI+ P+ ++ + T+ Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEVIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTV 177 Query: 182 ATI 184 + Sbjct: 178 VAV 180 >gi|241764085|ref|ZP_04762123.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] gi|241366616|gb|EER61097.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax delafieldii 2AN] Length = 213 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 5/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAYERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ V+ +D Q P +++H DF +V + + + + VP+ F N +S +K Sbjct: 61 DMEVAGTTSKVLLRDVQYHPYKQLVLHIDFQRVDDKTKLHMKVPLHFSNAEESDAVKVDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM----SQLNIT 180 +N V +E+ + C +++P+ I VDL+ LK G S+H++DI+LP+ S++ N Sbjct: 121 CMVNPVVNELDVTCMPSDLPEFIAVDLSTLKKGVSLHLKDIKLPKGVSAVIRGGQNNNPV 180 Query: 181 IATIVAP 187 + ++ P Sbjct: 181 LVSVANP 187 >gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] gi|241319620|gb|EER56050.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] Length = 190 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP+I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPSILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|148260671|ref|YP_001234798.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidiphilium cryptum JF-5] gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] gi|166223656|sp|A5FZ47|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5] gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301] Length = 217 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++A R + GKG AR R+ G++PA+IYG +P IAL + + + + + + + Sbjct: 6 TIAAEDRARAGKGVARATRRAGKVPAVIYGAKQEPTLIALDPRIVLREMKRGGWRSRLYE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + +D QL PV+D H DF +++ G V V V V F+NE S G+K+GG Sbjct: 66 IETASGKARALMRDIQLHPVTDQPEHVDFQRLAAGEPVRVAVNVNFLNELISVGMKRGGV 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR-LPEKTSSMSQLNITIATIV 185 LNVV H V +LC ++IPD DL L I D+I D++ E +++ + IATI Sbjct: 126 LNVVRHAVEVLCDPDHIPDHFEADLGPLDINDNIRWSDLKGTGEAKPTITDRDFVIATIA 185 Query: 186 AP 187 P Sbjct: 186 PP 187 >gi|15676772|ref|NP_273917.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis MC58] gi|161869809|ref|YP_001598978.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria meningitidis 053442] gi|304387809|ref|ZP_07369983.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|71153154|sp|Q9JZW3|RL25_NEIMB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042363|sp|A9M423|RL25_NEIM0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7226114|gb|AAF41287.1| 50S ribosomal protein L25 [Neisseria meningitidis MC58] gi|161595362|gb|ABX73022.1| 50S ribosomal protein L25 [Neisseria meningitidis 053442] gi|254670387|emb|CBA05900.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] gi|261392771|emb|CAX50347.1| 50S ribosomal protein L25 [Neisseria meningitidis 8013] gi|304338074|gb|EFM04210.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091] gi|316985770|gb|EFV64714.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325135916|gb|EGC58526.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M0579] gi|325137740|gb|EGC60315.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis ES14902] gi|325139971|gb|EGC62500.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis CU385] gi|325198077|gb|ADY93533.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis G2136] gi|325200439|gb|ADY95894.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76] gi|325202337|gb|ADY97791.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240149] gi|325203949|gb|ADY99402.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240355] gi|325206289|gb|ADZ01742.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M04-240196] gi|325207910|gb|ADZ03362.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NZ-05/33] Length = 190 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|254464271|ref|ZP_05077682.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] gi|206685179|gb|EDZ45661.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I] Length = 207 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L R GKG+AR R+ G +P ++YG ++P I + ++ K+L + F Sbjct: 1 MAKEIPDLVVQERAGTGKGAARAARRAGMVPGVVYGGDAEPLAIQVPFNELLKKLKAGQF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G + V VI +D Q D V D+ H D +++ S + +++ V FINE+K+P Sbjct: 61 KSTLWNLKVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLYIHVEFINEDKAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L A +IP+ I VDL L IGD I + + LP + + Sbjct: 121 GIKKGGMLTVVRPEVELNVTAGDIPEKIVVDLEGLNIGDVITISSVDLPAGAKPVIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPAG 190 >gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas sp. JS666] gi|123165230|sp|Q12E00|RL25_POLSJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91696413|gb|ABE43242.1| LSU ribosomal protein L25P [Polaromonas sp. JS666] Length = 227 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG +P I L + + + F ++L Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPSLIELDHNALWHAIKKEAFHASVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++G + V+ +D Q+ P ++H DF +V + +T+ VP+ + E +SP +K + Sbjct: 61 EMEMGGKTEKVLLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLHYSGEEESPAVKVEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 +N V E+S+ C ++P+ I ++L LK G S+H++DI LP+ ++ Q N + Sbjct: 121 CLVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPKGVKFVAKGGQDNPVL 180 Query: 182 ATIVA 186 ++ A Sbjct: 181 VSVSA 185 >gi|307266021|ref|ZP_07547568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] gi|306918983|gb|EFN49210.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacter wiegelii Rt8.B1] Length = 202 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + + A+ RD GK +AR L+ G IPAI+YG + P+A+ + + K+ Sbjct: 1 MQAISIEAIKRD-TGKNAARCLKNQGYIPAILYGKGMAESIPLAVEYNALQRL-LQKHGR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + + K+ Q D + +IH DF +VS + VP++F Sbjct: 59 NVLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKFEGIGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL++L+IGD++ ++DI++PE + + + Sbjct: 118 -RGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDEIV 176 Query: 182 ATIVAPI 188 +++AP Sbjct: 177 VSVLAPR 183 >gi|152980425|ref|YP_001354819.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] gi|166223690|sp|A6T2S2|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] Length = 214 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R ++G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 1 MKVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ F+N SP +K G Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ V E+ + C +++P+ + VDL +L +G SIH+ DI+LP+ +++ + N TI Sbjct: 121 GIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTI 180 Query: 182 ATIVAPIS 189 AT P Sbjct: 181 ATASVPAG 188 >gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia canis str. Jake] gi|109893361|sp|Q3YT12|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake] Length = 209 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++A +R+ VG G AR +R+NG IPA++YG D + LS ++ + S T ++ Sbjct: 7 VKINASLRENVGTGPARAVRRNGGIPAVVYGKNRDSLSVFLSDREFLSKHRSAALSTHLI 66 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+IG + +V+ +D Q PV+D + H DF + G+ + + VP+ F NE K G+K+GG Sbjct: 67 ELEIGDKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGVKRGG 126 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 LN++ +S+ C N I +I +DL+DL G SIH+ D+ LP + + + + N I TI Sbjct: 127 VLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMKEHNPAIVTI 186 Query: 185 V 185 Sbjct: 187 S 187 >gi|294629795|ref|ZP_06708355.1| 50S ribosomal protein L25 [Streptomyces sp. e14] gi|292833128|gb|EFF91477.1| 50S ribosomal protein L25 [Streptomyces sp. e14] Length = 198 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R++ ++P ++YG+ +DP + L ++ L + N Sbjct: 1 MSEVKISAATRSEFGKGAARRIRRDNKVPGVLYGHGTDPLHLTLPGHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++LDI + + IPK Q DP+ L H D L V G V V +PV E G Sbjct: 58 VLISLDIDGKSNELAIPKSVQRDPLKGFLEHVDLLLVKRGEKVNVEIPVVAEGELAPGG- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L V + + A +IP+ +TV + L+ G SIH +DI LP S + + Sbjct: 117 ---NLLEHVLSSLPVEAEATHIPEQVTVSVEGLEAGASIHAKDITLPSGVSLAVDEDAVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 6/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L +RD+ G GSAR LR+ G +P ++YG +P + L A +++ Sbjct: 1 MERVQLDVELRDETGTGSARRLREQGLVPGVVYGRNQEPINLKLDATELA----DVTGGN 56 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L + E V+ KD Q D ++D +H DF Q++ + V VP+ + G+K Sbjct: 57 AIIDLQVDGEEKTVMVKDVQKDVITDEYLHVDFHQIALDEPIVVEVPISLE--GVAEGVK 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V + C IP + +++++L++G+S+H+ D+ E + + + Sbjct: 115 EGGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEGIELTTSGDEVVV 174 Query: 183 TIVAP 187 T+VAP Sbjct: 175 TVVAP 179 >gi|329119316|ref|ZP_08248003.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] gi|327464663|gb|EGF10961.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria bacilliformis ATCC BAA-1200] Length = 211 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 103/189 (54%), Gaps = 4/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A +R+ G G++R LR+ GQ+PA++YG+ + IA+ K + L F T++ Sbjct: 23 SYELQATLREAQGTGASRRLRRAGQVPAVLYGDNQEAVAIAVDHKTVFYALEKSAFHTSL 82 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P ++H DF V + + +PV +N KS +K Q Sbjct: 83 IKLTLDGKTQDVIVRDFQIHPFRQQVVHLDFQAVDLNKPLRLRLPVAVVNAEKSKAVKLQ 142 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G+++++ V +L NIP ++ +D ++ GD +H+ DI+ PE SS++ N+ Sbjct: 143 SGRVSLLATTVEVLVDPKNIPSALELDCAEVVAGDILHLSDIKYPEGVSSVALKRGSNLA 202 Query: 181 IATIVAPIS 189 +AT+ Sbjct: 203 VATVTGKKG 211 >gi|240112553|ref|ZP_04727043.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae MS11] gi|240117581|ref|ZP_04731643.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria gonorrhoeae PID1] gi|268598621|ref|ZP_06132788.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268603284|ref|ZP_06137451.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] gi|268582752|gb|EEZ47428.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11] gi|268587415|gb|EEZ52091.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1] Length = 190 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTAVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|229819486|ref|YP_002881012.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] gi|229565399|gb|ACQ79250.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beutenbergia cavernae DSM 12333] Length = 214 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 7/182 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++A R + GKG+AR LR+ QIPA++YG+ +DP ++L + L +L Sbjct: 4 SITATRRTEFGKGAARRLRRANQIPAVLYGHGTDPVHLSLPWHETFLALKGSA--NALLE 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + KD Q DPV + H D L V G VTV VP+ + E+ G Sbjct: 62 LSFDDASELALAKDVQRDPVKGRIEHLDLLLVRRGERVTVEVPIHVVGESAP-----GTI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V +++ A ++P+ ITVD+ L+ G + + D+ LP T + + + I Sbjct: 117 HTVDMQTLTVHAEATHLPEQITVDVEGLEDGTVVRVSDLVLPSGTDTDVDGEVPVVAIST 176 Query: 187 PI 188 P Sbjct: 177 PR 178 >gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp. TM1040] gi|123379135|sp|Q1GK67|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040] Length = 209 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L +R GKG+AR R+ +P +++G +DP I + + KRL + F Sbjct: 1 MANEIPDLECQVRAGTGKGAARAARRANLVPGVVFGGDADPLAIQIPYNVLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G + V VI +D Q D V D+ H D +++ S + + +PV FINE + Sbjct: 61 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + + Sbjct: 121 GLKRGGVLTVVRAEVELVVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGSKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|284033576|ref|YP_003383507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] gi|283812869|gb|ADB34708.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kribbella flavida DSM 17836] Length = 214 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+ A R + GKG+AR +R++ ++PA++YG+ +DP I L D L + N Sbjct: 1 MAEVKIQAESRTEFGKGAARRIRRDNKVPAVLYGHGTDPVHITLPGHDTMLALKTANA-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L G E + +PK Q DP+ + + H D + V G V V + V + S + Sbjct: 59 LLLIEVEGSESLLALPKQVQRDPIKNFIEHVDLVIVKRGEKVQVDIAVHLEGDAASETL- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + + + A +IPD +TV + L G IH D++LP T+ + + I Sbjct: 118 ----VVLENASILVEAEATHIPDGVTVSIEGLDAGAQIHASDLQLPAGTTLAVEPDTLIV 173 Query: 183 TIVA 186 + A Sbjct: 174 NVTA 177 >gi|226939244|ref|YP_002794315.1| Ctc [Laribacter hongkongensis HLHK9] gi|254801052|sp|C1DBA9|RL25_LARHH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226714168|gb|ACO73306.1| Ctc [Laribacter hongkongensis HLHK9] Length = 185 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 4/182 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A R G ++R LR+ G +P ++YG I+ + L + F ++I Sbjct: 2 TIEIQAQQRADQGSSASRRLRRAGVVPGVVYGAGKAAVAISFDHNTLYYALQKEGFHSSI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQ 123 L L I V +D Q+ + H DF +V + + VP +FIN SP + Sbjct: 62 LNLVIDGATEQVFVRDVQMHAFKPQVQHIDFQRVDANTVIEAKVPFKFINGEISPAVKMN 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNIT 180 G + + + + C N+P +I VDL+ L G+S+H+ I+LPE S +++ Sbjct: 122 GKIIGHLLNAAVVRCLPANLPAAIEVDLSTLVAGESVHLSSIKLPEGVEFASLRSGKDLS 181 Query: 181 IA 182 +A Sbjct: 182 VA 183 >gi|163739061|ref|ZP_02146474.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] gi|163741697|ref|ZP_02149087.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161384870|gb|EDQ09249.1| ribosomal protein L25 [Phaeobacter gallaeciensis 2.10] gi|161387866|gb|EDQ12222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Phaeobacter gallaeciensis BS107] Length = 209 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R+ G +P +++G +DP I + ++ K+L + F Sbjct: 1 MAGQIPDLVCQERTGSGKGAARAARRAGMVPGVVFGGDADPVSIQIPFNELLKKLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G+E V VI +D Q D V D+ H D +++ S V + VPV FINE ++P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEEEAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L V EV L+ A +IP+ + VDL L +GD++ + I+LPE + Sbjct: 121 GIKRGGVLTAVRPEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANISAPSG 190 >gi|21221562|ref|NP_627341.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces coelicolor A3(2)] gi|256787246|ref|ZP_05525677.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces lividans TK24] gi|289771145|ref|ZP_06530523.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] gi|71153667|sp|Q9K3T9|RL25_STRCO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|8894757|emb|CAB95917.1| ribosomal L25p family protein [Streptomyces coelicolor A3(2)] gi|289701344|gb|EFD68773.1| 50S ribosomal protein L25, Ctc-form [Streptomyces lividans TK24] Length = 198 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKLTAETRTEFGKGAARRIRRDNKVPGVLYGHGSDPLHLTLPGHELLLALRTSN--- 57 Query: 63 TILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + + IPK Q DP+ L H D V G TV+V +PV+ E G Sbjct: 58 VLIALDIDGKTNELAIPKSVQRDPIKGFLEHVDLQLVKRGETVSVEIPVQAEGELAPGGF 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L + + A +IP +TV + L+ G SIH +DI LP + + Sbjct: 118 LLEYVL----DALPVEAEATHIPQQVTVSVAGLEAGASIHAKDIALPSGVKLDVDGDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax citrulli AAC00-1] gi|166223655|sp|A1TT74|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1] Length = 210 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 95/170 (55%), Gaps = 1/170 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I + + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V E + + + VP+ F +SP +K Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFTGAEESPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +N V E+ + C +++P+ I VDL+ L+ G S+H++DI+LP S + Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSPV 170 >gi|115378654|ref|ZP_01465804.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|310823076|ref|YP_003955434.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] gi|115364320|gb|EAU63405.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1] gi|309396148|gb|ADO73607.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1] Length = 232 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M + L A R+ GKG+AR LR G +PA++YG + P +A++ K + + + + + Sbjct: 1 MSVDKSSLEAKAREGSGKGAARKLRAQGLVPAVVYGKHLEKPVHVAVNPKAVKQAINTPH 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++ L + V+ KDYQ DP+S ++H DF+ V + V V+VP+ + K+ Sbjct: 61 KFNTLIQLKLDSATHQVLLKDYQTDPLSREILHVDFIDVRDNEQVKVNVPLVLV--GKAV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G GG L E+ + IP+ I VD+ LKI ++H+ DI+LP+ S + +N Sbjct: 119 GTADGGLLTQARRELEVWALPQAIPEKIEVDVTPLKIAQALHINDIKLPQGVSVKTNVNY 178 Query: 180 TIATIVAP 187 T+A + AP Sbjct: 179 TLAVVSAP 186 >gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii RML369-C] gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] gi|109893391|sp|Q1RI71|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223713|sp|A8GVL5|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C] gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia bellii OSU 85-389] Length = 202 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R++ G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAKSRNEFGTGAARALRREGRVPAIIYGAKKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIEGTQYKVLPKAVELHPVTDIVRHVDFVFL-EDKTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ ++LPE S ++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKVKLPEGCSFTTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|238062583|ref|ZP_04607292.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] gi|237884394|gb|EEP73222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25 [Micromonospora sp. ATCC 39149] Length = 230 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 5/176 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G +PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGMVPAVLYGHGEKPKHIALPAREFAAAIRKGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 V +PK Q DP+ D H D L V G VTV VPV+ E + Sbjct: 61 LFAIEVSDGTQVLALPKAIQRDPIKDSFEHVDLLLVRRGEKVTVEVPVQLTGEAAKDTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + +S+ A +PD + + L+ G + D+ LP + Sbjct: 120 ----IVHDHDTLSVTADATKVPDHLEASIEGLEAGTQVTAADVELPSGVELAADPE 171 >gi|134096054|ref|YP_001101129.1| 50S ribosomal protein L25/general stress protein Ctc [Herminiimonas arsenicoxydans] gi|166223689|sp|A4G921|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|133739957|emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC) [Herminiimonas arsenicoxydans] Length = 210 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 4/188 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R+ +G G++R R G P I+YG + P I+L + L + F ++IL Sbjct: 1 MKVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L++ ++ V+ +D+Q+ +++HADF +V + V VP+ FIN SP +K Q Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQA 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 G ++ V E+ + C N+P+ + VDL L++G SIH+ DI+LP+ ++ + N TI Sbjct: 121 GIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTI 180 Query: 182 ATIVAPIS 189 AT P Sbjct: 181 ATAAVPAG 188 >gi|308389048|gb|ADO31368.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha710] gi|325130024|gb|EGC52817.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis OX99.30304] Length = 190 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYETQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V +L NIP + +D ++ GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|108803738|ref|YP_643675.1| 50S ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] gi|108764981|gb|ABG03863.1| LSU ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941] Length = 226 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 4/187 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNF 60 + L A +R GKG AR LR +G IPA++YGN S +A+ AK + Sbjct: 1 MAENVALEARIRQGRGKGEARRLRASGMIPAVLYGNGSAQSTALAVPAKVVD-YTLQHYG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L++ D Q DP++ L+H DF V + V VP+ + G Sbjct: 60 DNALYDLELDGGKKTARVVDVQRDPLTGRLLHVDFAPVDMTERIEVAVPLAL--AGEPAG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V +EV + +IP I VD++ L + +++ + D+RLPE +S Sbjct: 118 VKEGGVLQQVAYEVRVEALPGDIPQEIEVDVSGLGMQENLTLGDVRLPEGLRLVSDPEEV 177 Query: 181 IATIVAP 187 +AT+ P Sbjct: 178 VATVTPP 184 >gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia felis URRWXCal2] gi|75536799|sp|Q4UMK5|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2] Length = 203 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G++R LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAKSRTEFGTGASRALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S ++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFTTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|332528605|ref|ZP_08404587.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] gi|332041921|gb|EGI78265.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella gracilis ATCC 19624] Length = 218 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 93/171 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG +P I L + L + F ++IL Sbjct: 1 MKFVAFERAKQGTGASRRLRHTGRTPGIVYGGTVEPSLIELDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + V+ +D Q+ P +++H DF +V + + + VP+ + E SP IK Sbjct: 61 DMELNGKSNQVLLRDVQMHPYKPLVLHIDFQRVDANTKLHMKVPLHYSGEENSPAIKDKS 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +N + E+ + C ++P+ I VDL+ L G S+H++DI LP+ ++++ Sbjct: 121 LVNHIVTELEISCLPKDLPEFIAVDLSKLTKGASLHLKDITLPKGVTAVTH 171 >gi|302877722|ref|YP_003846286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] gi|302580511|gb|ADL54522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella capsiferriformans ES-2] Length = 202 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +A R G G++R LRK G +P ++YG+ + I ++ ++ +L +++F ++ Sbjct: 2 TTTFNATTRKTQGTGASRRLRKAGSVPGVVYGSG-EAVMIEMNHNELYYKLRAESFHASV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ- 123 LT+++ + V + + P + H DF +V + + VP+ FIN++ +P +K Sbjct: 61 LTMNLDGKEEAVQLRAFVNHPFRQQVQHLDFQRVDLSKKIHIKVPLHFINQDIAPAVKTG 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ----LNI 179 GGK++ V E + C ++P I VDL +++G S+H+ +++LP + Sbjct: 121 GGKISHVMIEAEISCLPADLPAFIEVDLGGMQLGHSVHLGELKLPRGVELCAHGEHAAEA 180 Query: 180 TIATIVAPIS 189 +AT+ P Sbjct: 181 VVATVHVPRG 190 >gi|323705135|ref|ZP_08116711.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535561|gb|EGB25336.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium xylanolyticum LX-11] Length = 199 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + K+ Sbjct: 1 MQNVELEAVLRTP-GKNAARKLKEKGYIPAILYGKGMESIPLAVETGKLRTIVQ-KHGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L + I KD Q D ++ LIH DF +VS V VP++F Sbjct: 59 VLLNLIVNGATHQAILKDEQKDELTGKLIHIDFQRVSMNEKVEAAVPLKFEGVGVIES-- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G + E+++ +IP+ I VD+++L IGD+I ++D+ +PE + + I Sbjct: 117 KGLLVQHQKWELNVEALPTDIPEEIVVDVSNLDIGDTILVKDVVVPEGVEKVDDSDEVIL 176 Query: 183 TIVAPI 188 T+VAP Sbjct: 177 TVVAPK 182 >gi|326441622|ref|ZP_08216356.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces clavuligerus ATCC 27064] Length = 193 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A +R + GKG+AR R+ +P ++YG+ +DP + L A ++ L + N Sbjct: 1 MSEVKIAAELRTEFGKGAARRDRRANLVPVVLYGHGTDPVHLTLPAHELLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI IPK Q D + L+H D L V G VTV VPV+ E G Sbjct: 58 VLLSLDIEGRNELAIPKAVQRDALKGFLVHVDLLLVKRGEKVTVEVPVQTEGELAPGG-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V + + A +IP ++TV + L GD+IH +DI LP+ + + Sbjct: 116 --NLAEHVLVALPVEAEATHIPQALTVSVAGLTAGDAIHAKDITLPKGVELAVDADAVVI 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|297200252|ref|ZP_06917649.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] gi|197716994|gb|EDY61028.1| ribosomal protein L25, Ctc-form [Streptomyces sviceus ATCC 29083] Length = 197 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K++A R + GKG+AR +R++ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKIAAETRSEFGKGAARRIRRDNKVPGVLYGHGSDPIHLTLPGHELLLALRTSN--- 57 Query: 63 TILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++LDI + + IPK Q DP+ L H D V G V V + V+ + Sbjct: 58 VLISLDIDGKTNELAIPKSVQRDPIKGYLEHVDLQLVKRGEQVNVEIFVQTEGDLAPGAF 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 V + + + A +IP+S+TV + L GDSI +DI LP+ T + + Sbjct: 118 LLE----HVLNALPVEAEATHIPESVTVSIEGLSAGDSILAKDIPLPKGTKLAVDEDTVV 173 Query: 182 ATIVAPIS 189 ++A + Sbjct: 174 LQVLAAQA 181 >gi|20808386|ref|NP_623557.1| 50S ribosomal protein L25/general stress protein Ctc [Thermoanaerobacter tengcongensis MB4] gi|71153671|sp|Q8R8L3|RL25_THETN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|20516998|gb|AAM25161.1| Ribosomal protein L25 (general stress protein Ctc) [Thermoanaerobacter tengcongensis MB4] Length = 199 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 + L AV R+ GK +AR L+ G +PAI+YG + P+A+ + K L Sbjct: 1 MQAITLEAVKRE-TGKSAARRLKNQGYVPAIMYGKDMTENIPLAVEYTKLQKLLQKY-GR 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L + + + K+ Q D + +IH DF +VS + VP+RF Sbjct: 59 NVLLNVVVNGTTHTALIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLRFEGIGLIES- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + E+++ + IP I VDL+ L+IGD++ ++DI +PE + + Sbjct: 118 -KGGIVQHQLWELTVESLPDKIPQEIVVDLSHLEIGDTLFVKDIPVPEGVKVLDDPEEIV 176 Query: 182 ATIVAPI 188 +I+ P Sbjct: 177 VSILVPK 183 >gi|121607939|ref|YP_995746.1| 50S ribosomal protein L25/general stress protein Ctc [Verminephrobacter eiseniae EF01-2] gi|166223729|sp|A1WGH1|RL25_VEREI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121552579|gb|ABM56728.1| LSU ribosomal protein L25P [Verminephrobacter eiseniae EF01-2] Length = 235 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 95/170 (55%), Gaps = 1/170 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 A R K G G++R LR +G+ P I+YG ++P+ I L + L + F +++L Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQMIELDHNALWHALKKEAFHSSVL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P ++H DF +V + + + + VP+ + +S +K Sbjct: 61 DMEVAGKTDKVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKVPLHYSGSEESNAVKVDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +N++ +E+ + C +++P+ I VDL+ L+ G S+H++DI+LP + + Sbjct: 121 CMVNLIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPRGVTPV 170 >gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6] Length = 209 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G +P ++YG +P+ I + ++ K+L + F Sbjct: 1 MAKEIPDLVAQARAGTGKGAARAARRAGMVPGVVYGGDVEPQAIQIPFNELLKKLKAGQF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G+E V VI +D Q D V D+ H D +++ S + + +PV F+NE+ P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPVEFLNEDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+ A +IP+ I VDL D IGD I + I LP + + Sbjct: 121 GIKKGGMLTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDLPGGSKPTIDRDF 180 Query: 180 TIATIVAPIS 189 +A I AP Sbjct: 181 VVANIAAPGG 190 >gi|225076511|ref|ZP_03719710.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] gi|224952190|gb|EEG33399.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens NRL30031/H210] Length = 190 Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGESQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLYLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQVVRIRVPLHIVNAENSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V + NIP + +D + GD +H+ DI+LPE S+S N+ Sbjct: 122 GGRVSLLNTSVEVAAFPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp. HTCC7211] Length = 232 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R+ KG LR NG +PAIIYG + + I++S K + + +NF++ I+T Sbjct: 3 SLNANIRNTKTKGELSALRNNGNVPAIIYGGEAQNEKISISKKLLKSLIEKENFLSNIVT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + +V+PK+ + +SD IH DFL+V G + + VPV+FIN KSPG+K+GG Sbjct: 63 LNVDGKSQNVLPKEIKYHIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLKRGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN+V +V L CP+ IP+S+ +DL+ + IG+S + I+L ++ + IAT+ Sbjct: 123 LNIVRRKVELRCPSEKIPESLVIDLDGIDIGESFKISSIKLETDVEPTIRGRDFVIATLA 182 Query: 186 AP 187 AP Sbjct: 183 AP 184 >gi|261365424|ref|ZP_05978307.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] gi|288566085|gb|EFC87645.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996] Length = 190 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 4/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LR+ GQIP I+YG +P IA+ K + L ++F T + Sbjct: 2 TYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTAL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + E VI +D+Q+ P + H DF V V + VP+ +N S +K Q Sbjct: 62 IKLSLNSETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAESSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 GG+++++ V ++ NIP + +D + GD +H+ +I+LPE S+S N+ Sbjct: 122 GGRVSLLNTTVEVVALPANIPAYLDLDCAKVVAGDILHLSNIQLPEGVESVSLKRNENLA 181 Query: 181 IATIV 185 +AT+ Sbjct: 182 VATVT 186 >gi|295838328|ref|ZP_06825261.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] gi|197695879|gb|EDY42812.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB74] Length = 197 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N Sbjct: 1 MAEVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +++ + VIPK Q DP+ L H D L V+ G V V +PV + Sbjct: 58 VLLAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVNRGEKVQVEIPV----LAEGDLAP 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S + + + Sbjct: 114 GQFLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVSLAVEPDAVVI 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia prowazekii str. Madrid E] gi|6225985|sp|Q9ZCV3|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii] gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii Rp22] Length = 203 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 108/184 (58%), Gaps = 1/184 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F++ ++ Sbjct: 5 LELEAKSRTEFGTGAARALRREGRVPAIIYGAGKTPISISLKEKEITKYYRKPAFISQLI 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L I K+ V+PK +L PV+DI+ H DF+ + T + VP+ + + ++ G+K+GG Sbjct: 65 NLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPIVYEGKERALGVKRGG 123 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N++ V LLC NNIP ++T+D+ ++ IG S+ + LP+ S +++ +ATI+ Sbjct: 124 YFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGCSFITKKEFVLATII 183 Query: 186 APIS 189 Sbjct: 184 GRRG 187 >gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193] gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193] Length = 209 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ L A R GKG+AR R+ G +P ++YG +DP I + + K+L + F Sbjct: 1 MAKEIPDLVAEERAGTGKGAARAARRAGMVPGVVYGGDADPLSIQIPFNVLLKKLKAGKF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G+E V VI +D Q D V D+ H D +++ S + + +PV FINE+ P Sbjct: 61 KSTLWNLKVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSEINLFIPVEFINEDTCP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL + +IGD I + I LP + Sbjct: 121 GVKKGGMLAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIELPTGARPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANIAAPGG 190 >gi|149925764|ref|ZP_01914028.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] gi|149825881|gb|EDM85089.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter sp. MED105] Length = 195 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 103/190 (54%), Gaps = 5/190 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R + G G++R LR+ GQ+P I+YG + + +++ + L + F ++IL Sbjct: 1 MKVVATSRTEQGSGASRRLRRAGQVPGIVYGANQEAQAVSIEHNPLWHALQKEKFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ-G 124 L+I + V+ +DYQ P L+H DF ++ + ++VP+ F +SP +K Sbjct: 61 DLEIDGKSQQVLLRDYQSHPYKPQLLHIDFQRIDGNQKIHMNVPLHFSGHLESPAVKLYA 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQ--LNITI 181 G++ V +++ + C ++P+ I VD + L + SIH+ +++ PE S + ++++ Sbjct: 121 GQVTFVANQIEIECLPKDLPEFIAVDCSVLDVTKRSIHVTELQFPEGVSIPNHGQQDLSV 180 Query: 182 ATIVAPISGS 191 T+ +G+ Sbjct: 181 VTVKI-KAGA 189 >gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B] Length = 209 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L R GKG+AR R+ +P +++G +DP I + + KRL + F Sbjct: 1 MANEIPDLECQERAGTGKGAARAARRAHMVPGVVFGGDADPLAIQIPYNVLLKRLKAGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G + V VI +D Q D V D+ H D +++ S + + +PV FINE + Sbjct: 61 KSTLFNLKVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECV 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L VV EV L+ A +IP+ +TVDL IGD IH+ D+ LPE + Sbjct: 121 GLKRGGVLTVVRAEVELIVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA I AP Sbjct: 181 VIANISAPSG 190 >gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25/general stress protein Ctc [Azorhizobium caulinodans ORS 571] gi|172047829|sp|A8HS67|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571] Length = 207 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 90/183 (49%), Positives = 129/183 (70%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L AV R + GKG+AR R+ G++PA+IYG +P I+L K+I++ +Y+ +F+TT+ Sbjct: 6 ELKAVARARGGKGAARAERRAGRVPAVIYGEKQEPVTISLGHKEITRIIYAGHFLTTLFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ VIP+DYQLDPV D+ +H DFL+VS+G++VTV VPV F N++K+PG+K GG Sbjct: 66 IDVDGVKHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFENQDKAPGLKSGGT 125 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 LNVV H V+L CPA IPD + DL L+IGDS+H+ ++LP SS + T+ATIVA Sbjct: 126 LNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVSSAVTGDDTLATIVA 185 Query: 187 PIS 189 P Sbjct: 186 PSG 188 >gi|239981714|ref|ZP_04704238.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291453574|ref|ZP_06592964.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] gi|291356523|gb|EFE83425.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces albus J1074] Length = 196 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R+ ++P ++YG+ ++P I L ++ L + N Sbjct: 1 MSEVKISAETRSEFGKGAARRIRRESKVPGVVYGHGAEPAHIVLPGHELMMALKTSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++LD+G + VIPK Q D + L+H D L V G V V +PV + Sbjct: 58 VLISLDLGGKSELVIPKAVQRDALKGHLVHIDLLTVKRGEKVQVEIPVVAEGDLAPGA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + A NIP+S+TV + L GDS+ +DI+LP+ S + + + Sbjct: 116 --NLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDIKLPKGVSLDVEDDTVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|302519766|ref|ZP_07272108.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] gi|318061239|ref|ZP_07979960.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actG] gi|318075754|ref|ZP_07983086.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. SA3_actF] gi|302428661|gb|EFL00477.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SPB78] Length = 197 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N Sbjct: 1 MAEVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGAEPVHVTVPGHELMMALKTSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +++ + VIPK Q DP+ L H D L V G V V +PV + Sbjct: 58 VLLAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPV----LAEGELAP 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+ +TV + L+ G SI +DI+LPE S + + + Sbjct: 114 GQFLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIKLPEGVSLAVEPDAVVI 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|312144320|ref|YP_003995766.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] gi|311904971|gb|ADQ15412.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium sp. 'sapolanicus'] Length = 226 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 3/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + +R + GKG AR +R++G+IP ++YG DPK I L DI K L+S + Sbjct: 1 MERHSIEVELRTESGKGVARKIRRDGKIPGVVYGRGKDPKSIKLDPSDIEKLLFSNAIID 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + D G+E VI KD+Q + L+H DF +S +TV VP+ + G+ Sbjct: 61 LTVADDDGEES-TVIIKDFQKSVIKRELLHVDFQYISMDEKITVSVPLHLE--GTAAGVH 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + V + IP IT+D++DL++GDS+ D+ LPE ++ + I Sbjct: 118 DGGVLQQLLRNVDIDALPAEIPSEITIDISDLEMGDSLSAADLDLPEGIDLVTDSSEVIV 177 Query: 183 TIVAP 187 T+V P Sbjct: 178 TVVTP 182 >gi|159036391|ref|YP_001535644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] gi|157915226|gb|ABV96653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinispora arenicola CNS-205] Length = 234 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 5/176 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG AR R+ G++PA++YG+ PK IAL A++ + + Sbjct: 1 MSEVKISAEPRTEFGKGGARRTRRAGKVPAVLYGHGEKPKHIALPAREFAAAIRRGGANQ 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 V +PK Q DPV D H D L V G VTV VPV+ + E + Sbjct: 61 LFAIDISDGTQVLALPKAIQRDPVKDTFEHVDLLLVRRGEQVTVEVPVQLVGEAAKGTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 + +S+ A +PD + + L+ G + D+RLP + Sbjct: 120 ----IVHDHDTLSVTADATRVPDHLDATIEGLEAGTQVAAGDVRLPAGVELATDPE 171 >gi|319779110|ref|YP_004130023.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] gi|317109134|gb|ADU91880.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9] Length = 212 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++P I+YG +P I L +I L + F +++L Sbjct: 1 MKFTAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +D+ + V+ + Q ++H DFL+V G +T VP+ FIN+ SP +K G Sbjct: 61 EMDLDGKTETVLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFINDEVSPAVKLHG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITI 181 ++ + E+ + C ++P I VDL++L+ +H+ I+ P + ++ + Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIKPPAGVEFTGHNPEEDMVL 180 Query: 182 ATIVAPI 188 A+ +P Sbjct: 181 ASASSPR 187 >gi|269796295|ref|YP_003315750.1| 50S ribosomal protein L25P [Sanguibacter keddieii DSM 10542] gi|269098480|gb|ACZ22916.1| LSU ribosomal protein L25P [Sanguibacter keddieii DSM 10542] Length = 206 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 8/181 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A R + GKG+AR R+N QIPA++YG+ +DP +AL L N + Sbjct: 6 KLVAEARTEFGKGAARRTRRNNQIPAVLYGHGTDPVHVALPGHQTMLALKQSN---ALFE 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ + KD Q DPV +++ H D L V +G V V V V E G Sbjct: 63 IELDGTTQFALAKDVQRDPVKNVIEHVDLLIVKKGEKVEVEVNVHVTGEPVP-----GTI 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V V L A N+P+ I D+ + G I D+ LPE ++ ++ + + I Sbjct: 118 HIVQSQTVVLEALATNLPEWIEADVTGREAGTVITAGDLVLPEGSALITDADSDVVLISV 177 Query: 187 P 187 P Sbjct: 178 P 178 >gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] gi|109893377|sp|Q4FPH0|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Pelagibacter ubique HTCC1062] Length = 228 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+T Sbjct: 3 SLDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG Sbjct: 63 LNLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN+V ++ L CP+ IP +IT+DL+ + IG+S + ++L E + ++ + IAT+ Sbjct: 123 LNIVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLA 182 Query: 186 AP 187 AP Sbjct: 183 AP 184 >gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter ubique HTCC1002] Length = 228 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 1/182 (0%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ KG R LR G IP IIYG + + + K + + +F++ I+T Sbjct: 3 SLDANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIIT 62 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ + +V+P++ + +SD H DFL+V G + + VPV FIN SPG+K+GG Sbjct: 63 LNLDGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGV 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 LN+V ++ L CP+ IP +IT+DL + IG+S + ++L E + ++ + IAT+ Sbjct: 123 LNIVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLEEGVTPTIIGRDFVIATLA 182 Query: 186 AP 187 AP Sbjct: 183 AP 184 >gi|258654661|ref|YP_003203817.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] gi|258557886|gb|ACV80828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nakamurella multipartita DSM 44233] Length = 207 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L A R + GKG AR +R+ G++PA++YG+ +DP+ ++L+A++ + + Sbjct: 1 MSEVRLIAETRTEFGKGFARRIRRAGKVPAVLYGHGTDPRHLSLTAREFAAAIKGGANTV 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L L+ G E +PK P+ D H D L V G VTV VP + + G Sbjct: 61 LTLQLEGGDE--LALPKSVVRHPLRDYFEHVDLLLVRRGEKVTVEVP-VIVEGDAESGTL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L + EV A +IPDS++VDL G I D+ LP S ++ + Sbjct: 118 VLNDLTTLSIEV----EALSIPDSLSVDLTGAVAGTQILAGDVTLPAGASLITDAEALVV 173 Query: 183 TI-VAPIS 189 + VAP + Sbjct: 174 AVTVAPTA 181 >gi|269957488|ref|YP_003327277.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] gi|269306169|gb|ACZ31719.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylanimonas cellulosilytica DSM 15894] Length = 199 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 8/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL A R + GKG+AR LR+ +IPA++YG+ DP +AL + L N Sbjct: 1 MAEIKLVAEARSEFGKGAARRLRRESKIPAVLYGHGGDPVHVALPGHQTALALRQAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ + + KD Q D + ++ H D L V +G + V VPV E+ Sbjct: 58 ALFAVELDGKSQLAVVKDVQRDAIGTVIEHIDLLVVKKGEKIAVDVPVHITGESAP---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G V +S+ A +IP SI V + L G +I D+ LP ++ ++ + + Sbjct: 114 -GTIHIVEAQTLSVEAEATHIPVSIEVSIEGLAAGTNIFAADVTLPAGSTLLTDGDHIVV 172 Query: 183 TIVAPI 188 + P Sbjct: 173 AVAEPR 178 >gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 210 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 2/187 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+A R++ + S R +R+ G IP ++YG + I++ AK++ K L S N Sbjct: 1 MAEAMLNANPREERTRSSLRQIREQGGIPGVLYGKQTGSMAISVDAKELKKILGSVNGRN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ +++ VI K Q+D + + H DF +VSE + + VPV + G+ Sbjct: 61 TLINMNVNGAKRTVIVKSLQMDHLHRGIQHVDFQEVSENTKIRTVVPVHLV--GTPIGVT 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + V + C + IP+ I VD+++L+IGD++ + D+ LP + + T+ Sbjct: 119 HGGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVLDHPHTTVV 178 Query: 183 TIVAPIS 189 + + Sbjct: 179 GVANAKA 185 >gi|297626907|ref|YP_003688670.1| ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922672|emb|CBL57249.1| Ribosomal protein L25 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 219 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+A R++ GKG+AR +R+ +IPA++YG+ +DP + L L + N + Sbjct: 1 MAEIELNAEPRNEFGKGAARRIRREDKIPAVLYGHGTDPVHLTLPGHQTLLALRTANALL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I G E + +PK Q DP+ + H D L+V G VTV VP+ F+ I Sbjct: 61 NIHV--EGDEDLLALPKQVQRDPIKGFIKHVDLLRVRRGEKVTVEVPLEFVGVASPEAII 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + +++ IP+ I ++ +++GD + I LP I Sbjct: 119 NEERTQ-----LAIQAEITAIPNRIEASIDGMEVGDQLLAGQITLPAGAELEDDPETLIL 173 Query: 183 TIVA 186 + VA Sbjct: 174 SAVA 177 >gi|23097515|ref|NP_690981.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] gi|71153156|sp|Q8EU33|RL25_OCEIH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|22775738|dbj|BAC12016.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831] Length = 215 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 107/182 (58%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL+A R+ + K + + +R +G++PA++YG DPK +++ + D+ K + + I+ Sbjct: 3 VKLNATKREDLTKSATKQIRLSGRVPAVVYGKAKDPKNVSVDSVDLVKTVRDE-GRNAII 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L + V V+ DYQ+DP+ D L+HADF V+ + V+V VR + ++ G K+GG Sbjct: 62 SLQVENSSVDVMLHDYQIDPIKDELLHADFYVVNMSEEMDVNVAVRL--DGETKGEKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L +E+ + NNIP+ I +D++DL +GDS+ + DI++ + + ++A++ Sbjct: 120 VLQQPFYEILVRAKPNNIPEEIVIDVSDLDVGDSVSVADIKVDGNYEILEDPDTSVASVT 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|239930784|ref|ZP_04687737.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces ghanaensis ATCC 14672] Length = 193 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K++A R + GKG+AR +R++G++P ++Y + +P + L ++ L + N + Sbjct: 1 MADVKINAETRTEFGKGAARRIRRDGKVPGVVYEHGLEPLHVTLPGHELLLALRTPNVLI 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L GKE IPK Q DP+ L H D L+V G V V +PV+ E G Sbjct: 61 EL--LIDGKETQLAIPKAVQRDPLKGFLEHVDLLKVKRGEIVQVEIPVQPEGELAPGG-- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + A IPD +TV + L+ G S+ +DI LPE + + Sbjct: 117 --NLLEHVLPALPVAAEATRIPDYLTVSVAGLEAGASVLAKDITLPEGVKLAVDEDAVVL 174 Query: 183 TIV 185 ++ Sbjct: 175 QVL 177 >gi|260219880|emb|CBA26854.1| 50S ribosomal protein L25 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 227 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + K A R K G G++R LR G+ P I+YG +P I L + L + F +TI Sbjct: 20 DMKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPLLIELDHNALWHALKKEAFHSTI 79 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L ++ + V+ +D Q+ P +++H DF +V + +++ VP+ F + SP +K Sbjct: 80 LDMEFNGKESKVLLRDVQMHPYKQLVLHIDFQRVEANTKLSMRVPLHFSGQENSPAVKTD 139 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +N V E+ + C ++P+ I VDL+ L+ G S+H+ D+ LP+ T +++ Sbjct: 140 ACLINHVITELEVACLPADLPEFIAVDLSGLEKGKSLHVNDLALPKGTVAVTH 192 >gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia typhi str. Wilmington] gi|71153659|sp|Q68WD3|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington] Length = 203 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 110/188 (58%), Gaps = 2/188 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAKSRTEFGTGAARALRREGRVPAIIYGAGKIPISISLEEKEITKYYRRPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N++ V LLC NNIP ++T+D+ ++ IG S+ +++LP S +++ + Sbjct: 120 KRGGYFNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEVKLPIGCSFVTKKEFVL 179 Query: 182 ATIVAPIS 189 ATI+ Sbjct: 180 ATIIGRKG 187 >gi|304316109|ref|YP_003851254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777611|gb|ADL68170.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 200 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L AV+R GK +AR L++ G IPAI+YG + P+A+ + + K+ Sbjct: 1 MQNVELEAVLR-VPGKNAARKLKEKGYIPAILYGKGMESIPLAVETGKLRTIVQ-KHGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L + I KD Q D ++ LIH DF +VS + VP++ Sbjct: 59 VLLNLVVNGATHQAILKDEQRDELTGKLIHIDFQRVSMNEKIEAAVPLKLEGVGVIES-- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G + E+++ ++PD I VD+++LKIGD++ ++D+ +PE + + I Sbjct: 117 KGLLVQHQKWELNVESLPTSLPDEIVVDVSNLKIGDTLFVKDVNVPEGVEKVDDPDEVIL 176 Query: 183 TIVAPI 188 TIVAP Sbjct: 177 TIVAPK 182 >gi|256824231|ref|YP_003148191.1| 50S ribosomal protein L25P [Kytococcus sedentarius DSM 20547] gi|256687624|gb|ACV05426.1| LSU ribosomal protein L25P [Kytococcus sedentarius DSM 20547] Length = 226 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K KL+ R GKG+AR R+ G IPA++YG+ P + L + L N Sbjct: 1 MANKTIKLTCTERTTFGKGAARQARREGGIPAVVYGHGEGPFHVILPGHEAFIALRHTNA 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ E V+ KD Q DP+ I+ H DF+ V V V + + E Sbjct: 61 LMTLTW--GSGEDRLVLAKDVQRDPIKPIIEHVDFVIVDRNEKVDVDIAIHLDGEAGPET 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + ++V V++ P +IP+SITV + + G IH D+ LPE ++ T Sbjct: 119 V-----VSVPTSTVTVKAPVLDIPESITVSVEGAEAGTLIHAGDLELPEGVELVTDAEET 173 Query: 181 IATIV 185 I + Sbjct: 174 IINVS 178 >gi|325295185|ref|YP_004281699.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065633|gb|ADY73640.1| 50S ribosomal protein L25 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 195 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 6/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K L A R+K GKG AR LR+ G +PA+IYG + IA+ A ++ K + Sbjct: 1 MKTVSLKATRREKTGKGVARKLRREGLLPAVIYGGGRPEATHIAIPASEVRKIKHHHG-- 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LD+ E I KD Q + + D+ IH DF +V G T+T V + F+ Sbjct: 59 --LVKLDLDGEERICILKDIQYNWLGDVPIHVDFQEVKFGETITTVVELEFVGTPIGVS- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG L ++ E+ + IP+ I VD+++L GD++H+ +I +PE + T+ Sbjct: 116 EEGGVLEIMKREIEIETLPRAIPEKIVVDISNLHAGDALHVGEISVPEGIKIVDNPEETV 175 Query: 182 ATIV 185 + Sbjct: 176 VVVA 179 >gi|319789278|ref|YP_004150911.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] gi|317113780|gb|ADU96270.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermovibrio ammonificans HB-1] Length = 199 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 6/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K ++ A R+K GK A+ LR+ G +PA+IYG + PIA+ AK++ + + Sbjct: 1 MKVVEVKATRREKTGKEVAKKLRREGLLPAVIYGGGRPEATPIAIPAKEVRRIKHHHG-- 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ +D+G E I KD Q + + D+ IH DF +V+ G T+ V V + F+ Sbjct: 59 --LIKVDLGDEERMCILKDIQYNWLGDVPIHVDFQEVTFGETLEVVVELEFVGTPVGVS- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG L ++ EV++ IP+ I VD+++L GD++H++D+ LPE + + T+ Sbjct: 116 EEGGVLEILKREVAIETLPREIPEKIVVDISNLHAGDALHVKDLPLPEGAKFVDSPDETV 175 Query: 182 ATIV 185 + Sbjct: 176 VVVT 179 >gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] gi|166223714|sp|A8EY64|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia canadensis str. McKiel] Length = 204 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F Sbjct: 1 MS-KILELEAQSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ ++ L I K+ V+PK +L PV+DI+ H DF+ + E + VPV + + ++ G Sbjct: 60 ISQLINLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEE-KKQKMEVPVVYEGKERALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG N+V V+LLC NNIP ++T+D+ ++ I S++ I LP+ S S+ Sbjct: 119 VKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKIVLPKGCSFASKKEFV 178 Query: 181 IATIVAPIS 189 +ATI+ Sbjct: 179 LATIIGRRG 187 >gi|118579182|ref|YP_900432.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter propionicus DSM 2379] gi|166223702|sp|A1AM04|RL25_PELPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118501892|gb|ABK98374.1| LSU ribosomal protein L25P [Pelobacter propionicus DSM 2379] Length = 199 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M QK+ + +R K GKG +R LR +P ++YG DP ++++ +++ + + Sbjct: 1 MQQKQMNI--ELRSKTGKGISRKLRSADMVPGVVYGKGMDPMAVSINYRELQAAMAGEGG 58 Query: 61 MTTILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++TL G + I D Q D V H D +V+ + V VPV + Sbjct: 59 QNNLITLVGGGSLDQSMAIVADLQRDAVKGTYKHVDLHRVNMSEKLRVTVPVVLK--GTA 116 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+ HE+ + C NIPD I +D+ L + SIH+ +I LPE + Sbjct: 117 IGVKEGGLLDFAHHELHVECLPGNIPDHIEIDVTSLAVAHSIHVGEIALPEGVKVLDNPK 176 Query: 179 ITIATIV 185 + +++ Sbjct: 177 TPVVSVL 183 >gi|84497834|ref|ZP_00996631.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] gi|84381334|gb|EAP97217.1| putative ribosomal protein L25 [Janibacter sp. HTCC2649] Length = 228 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL A R K GKG+AR +R++ +IPA++YG+ S+P I L D L + N Sbjct: 1 MANDTIKLQAQARTKFGKGAARQIRRDHKIPAVMYGHGSEPVHITLMGHDAMMALKNPN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LT+ + + KD Q DP+ ++ H D + V +G VTV V V E Sbjct: 60 --ALLTIVLDGAEQLALAKDVQRDPIKPVIEHIDLVIVRKGEKVTVDVNVHLEGEAAPET 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +++ + L A NIP+S+TV + L+ G I I LPE + ++ Sbjct: 118 V-----VSLDNSSIQLEVEATNIPESVTVSVEGLEAGTQILAGAIELPEGATLITDAEAL 172 Query: 181 IATIV 185 + + Sbjct: 173 VVNVT 177 >gi|284989492|ref|YP_003408046.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] gi|284062737|gb|ADB73675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geodermatophilus obscurus DSM 43160] Length = 234 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R + GKGSAR R+ G+IPA++YG+ D ++L A++ + L Sbjct: 1 MADFRLVAEARTEFGKGSARRTRRAGRIPAVLYGHGQDVVHLSLPAREFAAALR-NGGSN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++T+ + E + K Q DP++ + H D L V G TV VP+ + E Sbjct: 60 ALITVVLDGEEQLALTKAVQRDPLTRVHEHVDLLLVRRGERTTVDVPIVVVGEPGIDA-- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 N + VS+ A N+PD+I VD+ G +I DI LP ++ ++ + Sbjct: 118 ---IPNHQLNTVSIEADATNLPDTIEVDVTGRTAGQNITAGDIVLPRGSTLITDPEALV 173 >gi|333026424|ref|ZP_08454488.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] gi|332746276|gb|EGJ76717.1| putative 50S ribosomal protein L25/general stress protein Ctc [Streptomyces sp. Tu6071] Length = 197 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ R + GKG+AR +R+ ++PA++YG+ ++P + + ++ L + N Sbjct: 1 MAEVKLAVETRTEFGKGAARRIRRESKVPAVVYGHGTEPVHVTVPGHELMMALKTSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +++ + VIPK Q DP+ L H D L V G V V +PV + Sbjct: 58 VLLAIELNGKNELVIPKAVQRDPLKGFLEHVDLLLVKRGEKVQVDIPV----LAEGELAP 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+ +TV + L+ G SI +DI LP+ S + + + Sbjct: 114 GQFLLEYVLNSLPVEAEATHIPEQLTVSVAGLEAGASIEAKDIELPKGVSLAVEPDAVVI 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957] Length = 214 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ A R++ GKG+AR RK+G++PA+IYG + ++L +D+ K ++ + + Sbjct: 3 QTIRIEAEARERAGKGAARATRKDGRVPAVIYGAKQEAVLLSLDPRDVMKEMHKGGWQSH 62 Query: 64 ILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + G E V + ++ Q PV D +H DF +++ G + V VPV F NE +PGIK Sbjct: 63 LYEVAVAGAEPVRCLMREVQFHPVKDSPLHVDFQRLAPGQMIRVKVPVVFQNEESAPGIK 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITI 181 +GG LNVV E+ +L + +P+ +DL IGDS+ ++ + T + + + Sbjct: 123 EGGVLNVVRRELEVLSDPDQVPEQFEIDLGAAVIGDSLRWSNVIDHKGTKPVIVGRDFVV 182 Query: 182 ATIVAP 187 ATI P Sbjct: 183 ATIAPP 188 >gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomicrospira crunogena XCL-2] gi|109893402|sp|Q31IN4|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2] Length = 193 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 8/190 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 + +A +R + GKG++R LR G++PAIIYG D K IAL + I + L + Sbjct: 1 MSQV-WTAELRTEEGKGASRRLRHAGKVPAIIYGGDVDAKSIALKSNQIERALKLDVDLY 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++LTL+ + + I KD Q P + + H DF + S+ + VT VP++F + SPG+ Sbjct: 60 NSVLTLEGAGDAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPLKFKGKESSPGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM------S 175 K GG ++ + V + C A ++P +I VD+++L+ G ++ + + LP+ + Sbjct: 120 KMGGLMSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKGVKLTALTHGNT 179 Query: 176 QLNITIATIV 185 + + I Sbjct: 180 DYDQAVVGIS 189 >gi|50842019|ref|YP_055246.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] gi|50839621|gb|AAT82288.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202] Length = 229 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%) Query: 2 DQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 + L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N Sbjct: 24 AMADIIHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN- 82 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ Sbjct: 83 PLLSIEIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-- 139 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + Sbjct: 140 ---GTIAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDV 196 Query: 181 IATIVAP 187 AT+ P Sbjct: 197 AATVAFP 203 >gi|238020516|ref|ZP_04600942.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] gi|237867496|gb|EEP68502.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147] Length = 190 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ A +R+ G G++R LRK G +PA++YG + + IA+ K + L ++F T + Sbjct: 2 SIQIQATVRETQGTGASRRLRKEGLVPAVVYGVG-EAQAIAVDHKQMFYALEKESFFTQL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 L L+I + VI +DYQ+ PV + H DF V+ + + +PV +N KS +K Q Sbjct: 61 LKLNINGKEQDVIVRDYQMHPVKRQVQHIDFQAVNVNEPLRMRIPVHVVNAEKSKAVKLQ 120 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G++ ++ V ++ NIP +I +D +++ GD +H+ D+ PE S++ N+ Sbjct: 121 SGRVALLTTVVDVIVDPKNIPAAIELDCENVEAGDILHLSDLSFPEGVQSVALKRGSNLA 180 Query: 181 IATIVAPISG 190 IA + Sbjct: 181 IANVSGKKGA 190 >gi|328882994|emb|CCA56233.1| LSU ribosomal protein L25p [Streptomyces venezuelae ATCC 10712] Length = 197 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG+AR +R+N Q+PA++YG+ S+P + L A D++ L + N Sbjct: 1 MSEVKLAAAVRTEFGKGAARAIRRNAQVPAVVYGHGSEPAHVTLPAHDLALALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI + IPK Q D + L+H D L V G VTV +PV+ E + G Sbjct: 58 VLLSLDIDGKNELAIPKAVQRDAIKGFLVHVDLLLVKRGEKVTVEIPVQAEGELAAGG-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V +S+ A ++P++++V + L+ G S+ +DI LP+ + ++ + + Sbjct: 116 --NLLEHVLSTLSVEAEATHLPEAVSVSVEGLEAGASVLAKDITLPKGATLVTDADAVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVL 176 >gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sulfurreducens PCA] gi|71153144|sp|Q74FE7|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39982532|gb|AAR33992.1| ribosoma protein L25 [Geobacter sulfurreducens PCA] gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400] Length = 194 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ +S +R+K GKG AR LR +P ++YG +P + ++AKD++ + + + Sbjct: 1 MEQKTMSIELREKNGKGVARKLRAQDVVPGVVYGKGIEPVSVKVAAKDLAATIAGEGGLN 60 Query: 63 TILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++TL G L VI D Q +P+ ++H DF ++S V VHVP+ + + G Sbjct: 61 SLITLSGGGSLNGNIVIVADMQRNPLKGDILHVDFHRISLDEKVKVHVPLVMV--GTAAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+VV + + + C IP++I VD+ +L IG SIH+ ++ LP ++ Sbjct: 119 VKEGGMLDVVTYSLDVECLPTAIPEAINVDVTNLAIGHSIHVSELVLPAGIKVLNDPETP 178 Query: 181 IATIV 185 I +I Sbjct: 179 IVSIH 183 >gi|153003001|ref|YP_001377326.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter sp. Fw109-5] gi|166223660|sp|A7H6J6|RL25_ANADF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|152026574|gb|ABS24342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter sp. Fw109-5] Length = 235 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++A R++ GKG AR LR+ G IPA++YG +P +++ + K + + + Sbjct: 1 MADNIINAQRREEKGKGPARRLRQKGLIPAVVYGRKQEPTHLSVDPASLLKAIETPHKFN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+LTL + HV+ KD+ +DPVS L HADFL+V V V VPV + +S G Sbjct: 61 TLLTLKLDGAEKHVLFKDWAVDPVSRKLEHADFLEVKLDEAVKVAVPV--VTSGRSVGQA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L++ HEV L + IP I VD+ +LKIG SIH+ + PE + IA Sbjct: 119 EGGILSLATHEVVLEALPSKIPVRIEVDVTNLKIGQSIHVSQLTPPEGCKLKYSSDYVIA 178 Query: 183 TIVAP 187 + P Sbjct: 179 FVAVP 183 >gi|152997607|ref|YP_001342442.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] gi|254801053|sp|A6W1C8|RL25_MARMS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|150838531|gb|ABR72507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinomonas sp. MWYL1] Length = 192 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R + GKG++R LR G +PA+IYG + P I+ ++ K + + F+T + Sbjct: 2 SLSINAVARTQEGKGASRRLRNEGLVPAVIYGGETAPVSISFKDNELLKAVGTPGFLTGL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + V+ K Q P + ++H D + +T VP+ FIN +S G+ + Sbjct: 62 VEVTVEGKTEQVLVKALQRHPSTGAVMHMDLQRAQADKAITTRVPLSFINAAQSEGVSKQ 121 Query: 125 GKLNVVCHEV-SLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 G V ++ + C N+P+ +TVD+ ++ H+ D+ LPE +S + Sbjct: 122 GGRLTVESKLAEVRCLPANLPEVLTVDVIKGQLDQIFHLSDVILPEGVELVSLLKGEDHD 181 Query: 179 ITIATI 184 IA I Sbjct: 182 QPIARI 187 >gi|325067352|ref|ZP_08126025.1| 50S ribosomal protein L25P [Actinomyces oris K20] Length = 204 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L L S + Sbjct: 2 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLLEEHATRLALRSNDN 61 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + G+ + + KD Q P+ + H DFL V V V VPV I E Sbjct: 62 ALVELDIAGGE-TLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGEAAP-- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 119 ---GTIHMIEAATVLVSAPAVSVPEAIEVDVTGVAAGTVLTLADITLPKGVEAVADAETA 175 Query: 181 IATIV 185 + + Sbjct: 176 VVNVA 180 >gi|225025469|ref|ZP_03714661.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] gi|224941753|gb|EEG22962.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC 23834] Length = 190 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K+ A +R++ G G++R LR+ G++PA++YG SD +++ K + L + F T I Sbjct: 2 SFKIEAQVREEQGTGASRRLRREGRVPAVVYGAGSDATAVSVDHKTVFFALQKEEFHTAI 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ PV + H DF V G + + +P+ +N KS +K Q Sbjct: 62 IKLALNGKEHDVIVRDFQMHPVRREVRHIDFQIVEAGKPIKIRLPLHVVNAEKSQAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 ++ ++ V +L +IP + +D + GD +H+ DI+ PE S S N+ Sbjct: 122 NSRVALLSTSVEVLLDPKHIPSELVLDCEKVVAGDVLHLSDIQYPEGVESTSLRRGANLA 181 Query: 181 IATIVA 186 +AT+ A Sbjct: 182 VATVTA 187 >gi|134097416|ref|YP_001103077.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|291004594|ref|ZP_06562567.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] gi|133910039|emb|CAM00151.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338] Length = 208 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+ R + GKG+AR R+ G++PA++YG+ SDPK ++L A + ++ + Sbjct: 1 MSEVRLTVEPRTEFGKGAARRTRRAGKVPAVLYGHGSDPKHLSLPAVEFARAIRENGHNA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + G + K P+ + + H D L V G VTV+VPV E + Sbjct: 61 VLTLDVAGSNSELALTKTITTHPIKNYIEHVDLLLVQRGEKVTVNVPVVLTGEAGPGTL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + E+S+ A +IP+ + + ++G I +I LP + + I Sbjct: 120 ----VTHEVTELSVEAEALHIPEQFEISIEGAEVGTQITASEIVLPRGVVLQTDEELLIV 175 Query: 183 TIV-API 188 + AP Sbjct: 176 NVTEAPS 182 >gi|326772330|ref|ZP_08231615.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] gi|326638463|gb|EGE39364.1| ribosomal protein L25, Ctc-form [Actinomyces viscosus C505] Length = 203 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+PA++YG+ ++P+ + L L S + Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPAVVYGHGTEPRHLLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L + G+ + + KD Q P+ + H DFL V V V VPV I E Sbjct: 61 ALVELDIAGGE-TLLALAKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGEAAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + V + PA ++P++I VD+ + G + + DI LP+ +++ Sbjct: 118 ---GTIHMIEAATVMVSAPAVSVPEAIEVDVTGVAAGTVLTLADIALPKGVEAVADAETA 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVA 179 >gi|257068516|ref|YP_003154771.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] gi|256559334|gb|ACU85181.1| ribosomal protein L25, Ctc-form [Brachybacterium faecium DSM 4810] Length = 203 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 8/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ +R+ GKG++R LR ++PA++YG+ P ++L D + + N + Sbjct: 1 MAE-KLNVELREDFGKGASRRLRAENRVPAVLYGHGEAPLHLSLPGHDTALAARNPNALL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + D + K+ Q P+ L H D + V +G V V +PV E +P + Sbjct: 60 ELALSDG--TKHLALIKEIQRHPLKRSLNHLDLITVRKGEKVEVEIPVILTGEPVAPAV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V ++L A N+P+ + + + D + G + D+ LPE + ++ I + Sbjct: 117 ----AFVDLQTLTLSVDALNVPEQVEISVEDTEDGYQLFAGDVTLPEDSELVTDAEILVV 172 Query: 183 TIVAPI 188 ++ P Sbjct: 173 SVAVPR 178 >gi|300781623|ref|ZP_07091477.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] gi|300533330|gb|EFK54391.1| 50S ribosomal protein L25 [Corynebacterium genitalium ATCC 33030] Length = 228 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R++ GKG++R LR G++P ++Y + D + +IS + + Sbjct: 1 MANPVIKAEKREEFGKGASRRLRAAGRVPGVLYSSGEDNLHFHVDILEISALVRND-GTN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 IL LDI E + K+ + ++ + H D L V G V V VPV + E + + Sbjct: 60 AILELDIDGEKNLAMVKNIDQNVLTLNIDHIDLLGVKRGEKVNVEVPVTYEGEAAADAVV 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V + A IPD I V + +IGD I D++LPE ++ + Sbjct: 120 L-----QELDVVEIEVEALKIPDEIIVSIEGKEIGDQIFASDLQLPEGAELLTDPEFLVI 174 Query: 183 TIV 185 + Sbjct: 175 NVT 177 >gi|227497783|ref|ZP_03927969.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] gi|226832783|gb|EEH65166.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434] Length = 207 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L R GKGSAR R+NGQ+P ++YG+ ++P+ L L Sbjct: 1 MANKAITLKGTDRTNFGKGSARQARRNGQVPVVVYGHGTEPRHFLLEEHATRLALR--GN 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + E + V+ KD Q P+ + H DF V+ V V VPV I E Sbjct: 59 ENALVELAVDGETILVLTKDVQRHPIRPGVQHVDFQLVNRNERVEVEVPVTVIGEP---- 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 V + + P +IP++I +D+ ++ G +I + DI LPE +++ Sbjct: 115 -VASTIHMVEAAHLLVSAPVISIPEAIEIDITGVEAGTTIRVSDITLPEGVEAVTDAEED 173 Query: 181 IATIV 185 + +V Sbjct: 174 VVNVV 178 >gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter lovleyi SZ] gi|226736326|sp|B3E6G0|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter lovleyi SZ] Length = 194 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ ++ R GKG +R LR G+IP I+YG +P I+L K ++ + + + Sbjct: 1 MQQTQMKIETRSSTGKGISRKLRAAGRIPGIVYGRGMEPVAISLEPKALNAAIAGEGGLN 60 Query: 63 TILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++TL+ G + V VI + Q D + H D +V+ V V+VPV + + G Sbjct: 61 NLITLEGGGDLDKVVVIVAEIQRDALKRTPEHVDLHRVNMSEKVRVNVPVSLV--GTAAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+ H + + C IP+ I +++ DLKIG +IH+ +I P + Sbjct: 119 VKEGGLLDFAHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFPAGVKCIDNPKTP 178 Query: 181 IATIV 185 + ++ Sbjct: 179 VVGVL 183 >gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] gi|166223712|sp|A8GP85|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia akari str. Hartford] Length = 199 Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L A R + G G+AR LR+ G++PAIIYG P I+L K I+K F+ Sbjct: 1 MSEILDLEAKPRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKAITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ + I ++ V+PK +L PV+D++ H DF+ + T + VP+ + + ++ G+ Sbjct: 61 SQLINVTIDQKQYKVLPKAVELHPVTDMVRHVDFVFLEA-KTQKMEVPIVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|297157756|gb|ADI07468.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces bingchenggensis BCW-1] Length = 193 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR R+ G +P ++YG+ ++P + L D+ L + N Sbjct: 1 MAEVKISAKSRTEFGKGAARRDRREGLVPGVVYGHGAEPVHVNLPGHDLMLALKTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + VIPK Q D + L H D L V G VTV V V+ E G Sbjct: 58 VLLGLDIEGKKELVIPKAIQRDAIKGFLKHVDLLLVKRGEKVTVEVRVQTEGELAPGG-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L + + + + A +IP+S+TV + L G SI +DI LP T+ + + + Sbjct: 116 --NLLEHLLNALPVETEATHIPESVTVSIAGLDAGHSILAKDITLPAGTTLAVEEDTVVL 173 Query: 183 TIV 185 +V Sbjct: 174 QVV 176 >gi|225181558|ref|ZP_03735000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] gi|225167806|gb|EEG76615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter alkaliphilus AHT 1] Length = 214 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ AV R+KV K + LR +G +P I+YG D IA+ +KDI L S Sbjct: 1 MERVQVQAVPREKVTKSQLKELRNSGMVPGIVYGQKDDAVAIAVDSKDIISILQSAAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDP-VSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++ L + VI K+ D + D H DFL++S + V VPV F + G+ Sbjct: 61 SLVDLAVEGNKETVIIKELVEDIFIQDRFTHVDFLRISLKDKLEVQVPVIFT--GDAVGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L + EVSL C IP+SI +D+++L +G+++ + D+ +P +++ + + Sbjct: 119 KEGGTLQPLLREVSLKCLPTEIPESIELDISNLSVGETLTVGDLTVPASAELLNEADEAV 178 Query: 182 ATIVAPI 188 ++ AP Sbjct: 179 VSVAAPR 185 >gi|329941174|ref|ZP_08290453.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] gi|329299705|gb|EGG43604.1| 50S ribosomal protein L25 [Streptomyces griseoaurantiacus M045] Length = 197 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR +R+ ++P ++YG+ SDP + L ++ L + N Sbjct: 1 MSEVKLAAAKRTEFGKGAARRIRREDKVPGVLYGHGSDPIHLTLPGHELLLALRTPN--- 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI G+ IPK Q DP+ L H D V G V V + V E G Sbjct: 58 VLIALDIEGEGQELAIPKSVQRDPIKGFLEHVDLQLVQRGEKVNVEIYVNTEGELAPGG- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L V + + + A +IP+S+TV + L GDS+ +DI LP T + + Sbjct: 117 ---NLLEHVLNTLPVEAEATHIPESVTVSVEGLAAGDSVLAKDIPLPSGTKLGVDGDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|85859731|ref|YP_461933.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophus aciditrophicus SB] gi|109893400|sp|Q2LUK6|RL25_SYNAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85722822|gb|ABC77765.1| LSU ribosomal protein L25P [Syntrophus aciditrophicus SB] Length = 200 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKN 59 + +L A +R + GK AR +R+ G IPA++YG +DP ++++A K K Sbjct: 1 MEARELKANVRKESGKEQARRMRREGLIPAVLYGPGTDPVSLSVNASDLKTALKGAEENV 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + I+ + + ++ Q++P+++ HADF + T VP+ F + Sbjct: 61 LIKLIIDDSGRLMEKNSLIRELQIEPLTNNFFHADFYALRMDQESTFDVPIHFE--GQPV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI++GG+L + E+ + C + +PD ITVD++ L +GD++ + D+ L E +I Sbjct: 119 GIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDLSLSESIRCFDSKDI 178 Query: 180 TIATIVA 186 + TI A Sbjct: 179 VLVTIAA 185 >gi|116669780|ref|YP_830713.1| 50S ribosomal protein L25P [Arthrobacter sp. FB24] gi|116609889|gb|ABK02613.1| LSU ribosomal protein L25P [Arthrobacter sp. FB24] Length = 199 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + N Sbjct: 1 MSEQKLAAEVRTEFGKGFARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVRVAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI E + KD Q DP+ I+ H D L V G VTV VPV E + Sbjct: 58 ALLTLDINGEQHLALVKDIQRDPIKQIIEHLDLLTVRTGEKVTVDVPVHVTGE-----LA 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G N VSL A ++P ++ V + G+ IH D+ LP+ + ++ + Sbjct: 113 PGNVYNQEMTVVSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLPKGSVLLADPESLVV 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella parapertussis 12822] gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella bronchiseptica RB50] gi|71153123|sp|Q7WNY3|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153125|sp|Q7W180|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis] gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50] Length = 204 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 5/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + I G + V+ + Q ++H DF +V + VP+ FIN SP +K Sbjct: 61 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLS 120 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + + N Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180 Query: 181 IA 182 IA Sbjct: 181 IA 182 >gi|303256347|ref|ZP_07342363.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|330999042|ref|ZP_08322767.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] gi|302861076|gb|EFL84151.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47] gi|329575784|gb|EGG57310.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis YIT 11859] Length = 217 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV R G G++R LR+ ++P I+YG PI L +I L + F +IL Sbjct: 1 MKFTAVTRKAQGTGASRRLRRAEKLPGIVYGGKVAATPIELDHNEIFHALRKEKFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + + + V+ + +Q+ P ++H DF ++S + ++VP+ F+ E KSP I Sbjct: 61 EMVLDGKSERVLLRSFQMHPYKPQVLHIDFQRISADEQIRMNVPLHFVGEEKSPAITIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS--QLNITIA 182 +N E+ + C + +P+ ITVDL+ L + +H+ D+ LPE + + + + T+A Sbjct: 121 TNVNHALTELLVSCLPDQLPEFITVDLSGLTVDKPVHVSDLVLPEGVTPVLKPEEDPTVA 180 Query: 183 T 183 + Sbjct: 181 S 181 >gi|83588951|ref|YP_428960.1| 50S ribosomal protein L25/general stress protein Ctc [Moorella thermoacetica ATCC 39073] gi|109893369|sp|Q2RMC2|RL25_MOOTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83571865|gb|ABC18417.1| LSU ribosomal protein L25P [Moorella thermoacetica ATCC 39073] Length = 208 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 5/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM- 61 + L MR +VGK +AR LR+ G++P IIYG + + A+ + L ++ Sbjct: 1 MQAQTLEVTMRPEVGKQAARRLRRQGKLPGIIYGKKIANLAVIIPARQLEHILATEGENA 60 Query: 62 --TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++ D + + ++ Q P+ L H DF QVS + VPV ++ Sbjct: 61 LLKLVVSGDGQNKEFTAVIREVQRHPLKGNLTHVDFYQVSMEDKLRATVPVILE--GEAR 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K+GG L E+ + ++P+SI VD++ L +G+ + + +I++P +S+ + Sbjct: 119 GVKEGGILQHGVREIEIESLPADLPESIVVDVSHLGVGEHLTVGEIKVPAGVKILSEPDT 178 Query: 180 TIATIVAPIS 189 IAT+V + Sbjct: 179 VIATVVTTRA 188 >gi|145590100|ref|YP_001156697.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189042364|sp|A4T069|RL25_POLSQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145048506|gb|ABP35133.1| LSU ribosomal protein L25P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 213 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+I + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 61 DLEIDGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFTNADTSAAVKLQG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ + E+ + C ++P+ + VDL +++G IH +DI LP+ + + N + Sbjct: 121 AVISHILTELEVSCLPADLPEFVEVDLAKIEVGHGIHAKDIALPKGVTLVLHVEQENPVL 180 Query: 182 ATIVAP 187 A P Sbjct: 181 ANARIP 186 >gi|320010340|gb|ADW05190.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces flavogriseus ATCC 33331] Length = 195 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL A +R + GKG+AR R+ +P ++YG+ ++P I L ++ L + N Sbjct: 1 MAEIKLDATVRTEFGKGAARRTRRANLVPGVVYGHGAEPVHINLPGHELLLALRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+I + VIPK Q + + + H D L V G V V + V + Sbjct: 58 VLIGLEIDGKDALVIPKAVQRNALKGNIEHVDLLTVKRGEKVNVEIAVHAEGDLAPGA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+S+TV + L GDSI +DI LP+ + + Sbjct: 116 --NLLEYVQNTLLVEAEATHIPESVTVSVAGLDAGDSIAAKDITLPKGAVLAGDEDAIVL 173 Query: 183 TIV 185 +V Sbjct: 174 QVV 176 >gi|302036153|ref|YP_003796475.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] gi|300604217|emb|CBK40549.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii] Length = 255 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 7/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L+ R+ GKG AR LR+ G++PA++YG + +++ ++ K L S+ T Sbjct: 1 MK-FDLTVESREGGGKGPARQLRRAGRVPAVLYGQG-ECLLLSVKPDELVKILRSQAGST 58 Query: 63 TILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +++L I K + +D+Q+DP++ ++HADF +V+ + V VPV + Sbjct: 59 ALISLTINGAKSKAKRTALLRDFQVDPIAGSVLHADFFEVAMDKPIRVKVPVHLTG-GQP 117 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L+ V ++ + C + +PD I VD + L+I IH++DI E + L Sbjct: 118 IGLKEGGVLHHVLRQLHIECLPSVLPDFIEVDASQLQINQGIHLKDIPKTEGLRFLDDLE 177 Query: 179 ITIATIVAP 187 + ++ AP Sbjct: 178 HMVVSVAAP 186 >gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis Tohama I] gi|71153126|sp|Q7VUH2|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I] gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella pertussis CS] Length = 208 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 6/186 (3%) Query: 3 QK-ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K +A R G ++R LR+ G++PAI+YG + P I L +I L + F Sbjct: 1 MEFSMKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFH 60 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 IL + I G + V+ + Q ++H DF +V + VP+ FIN SP Sbjct: 61 ALILNMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFINAEVSPA 120 Query: 121 IKQG-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---Q 176 +K ++ V E+ + C +P I V+L DL G SIH+ DI+LP+ + + Sbjct: 121 VKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGD 180 Query: 177 LNITIA 182 N IA Sbjct: 181 TNPLIA 186 >gi|296128741|ref|YP_003635991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] gi|296020556|gb|ADG73792.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cellulomonas flavigena DSM 20109] Length = 197 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A R + GKG+AR LR+ QIPA++YG+ + P +AL D L N + Sbjct: 1 MSEIKLAATARTEFGKGAARRLRRAHQIPAVLYGHGTQPLHVALPGHDTMLALKHSNALY 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ I KD Q D V ++ H D L V +G V V V V+ + E+ S Sbjct: 61 S---IELDGTSTLAIVKDVQRDVVRQVIEHVDLLIVKKGEKVAVDVQVQVVGESAS---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G V +SL A N+P+S+ + ++ L+ G + ++ LPE + +S I Sbjct: 114 -GTIHVVETQTLSLEALATNLPESVEISIDGLEAGTIVTAGEVTLPEGATLLSDPEQAIV 172 Query: 183 TIVAP 187 I P Sbjct: 173 AISEP 177 >gi|294669393|ref|ZP_06734472.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308803|gb|EFE50046.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 190 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A +R+ G G++R LR+ GQ+PA++YG + IAL K + L ++F T++ Sbjct: 2 SYELQATVREAQGTGASRRLRREGQVPAVLYGENQEAVAIALDHKTVFYALEKESFHTSL 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + L + + VI +D+Q+ P + H D V + + +P+ +N +S +K Q Sbjct: 62 IKLALNGKTHDVIVRDFQVHPFRQQIQHLDLQVVDLNKPLKIRLPIHVVNAEQSKAVKLQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNIT 180 G+++++ V ++ NIP ++ +D + GD +H+ DI+ PE SS++ N+ Sbjct: 122 SGRVSLLTTGVEVIVDPKNIPAALELDCAQVVAGDILHLSDIQYPEGVSSVALKRNSNLA 181 Query: 181 IATIVAPIS 189 +AT+ Sbjct: 182 VATVTGKKG 190 >gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium petroleiphilum PM1] gi|166223695|sp|A2SKU2|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1] Length = 214 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R+ G G++R LR +G++P I+YG +P I L + L + F ++L Sbjct: 1 MKFVAYPRELQGTGASRRLRISGKVPGIVYGAG-EPLKIELDHNALFHALKKEAFHASLL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + V+ +D Q+ ++H DF +V + VT VP+ F+NE +PG+K Sbjct: 60 DMEFNGKSQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLHFVNEENAPGVKLDK 119 Query: 126 -KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--SQLNITIA 182 ++ V E+ + C A+ +P+ +TVDL +L G S+H+ D++LP + + N IA Sbjct: 120 GLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPSVKVVLRGKKNPVIA 179 Query: 183 TIV 185 T+V Sbjct: 180 TVV 182 >gi|302551981|ref|ZP_07304323.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] gi|302469599|gb|EFL32692.1| ribosomal protein L25, Ctc-form [Streptomyces viridochromogenes DSM 40736] Length = 198 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR +R+ ++P ++YG+ SDP + L D+ L + N Sbjct: 1 MSEVKISAATRTEFGKGAARRIRREDKVPGVLYGHGSDPLHVTLPGHDLLMALRTPN--- 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI GK IPK Q DP+ L H D L V G V V + V E G Sbjct: 58 VLIALDIDGKTKELAIPKAVQRDPLKGFLEHVDLLLVKRGERVNVDIYVHTEGELAPGGF 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 V + + + A +IP+S+TV + L GDSI +DI LP+ T+ + + + Sbjct: 118 LLE----HVLNALPVEAEATHIPESVTVSVEGLSAGDSILAKDITLPKGTTLAVEEDTVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8] Length = 204 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 3/172 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 T--LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L+ + V+ + Q ++H DF +V + VP FIN SP +K Sbjct: 61 QMALEGAAKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPFHFINAEVSPAVKL 120 Query: 124 -GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 G ++ V E+ + C +P I VDL DL G S+H+ DI+LP+ + + Sbjct: 121 GGAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLADIKLPKGVTYV 172 >gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya novella DSM 506] Length = 212 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 1/188 (0%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R KVGKG+AR R+ G++PA+IYG+ P I L +I+K +Y+ +F+ Sbjct: 1 MTAIKELKATARAKVGKGAARAERRAGRVPAVIYGDGKAPVGITLDHVEINKIIYAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +D+ + VIP+DYQLDPV D +H DFL+V+ G+T+TV VPV F+N+ +P + Sbjct: 61 TTLFNVDVDGQKHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLTVDVPVHFLNQETAPAL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG LN+V H VSL PA IP++I VDL GDSIH+ I+LP + + T+ Sbjct: 121 KQGGTLNIVSHAVSLNVPAEAIPEAIEVDLTKYGFGDSIHLSAIKLPAGVTWAGHGDDTL 180 Query: 182 ATIVAPIS 189 ATI AP Sbjct: 181 ATITAPSG 188 >gi|302560229|ref|ZP_07312571.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] gi|302477847|gb|EFL40940.1| 50S ribosomal protein L25 [Streptomyces griseoflavus Tu4000] Length = 199 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA RD+ GKG+AR +R++ ++P ++YG+ SDP+ + ++ L + N Sbjct: 1 MSEVKISAATRDEFGKGAARRIRRDNKVPGVLYGHGSDPRHLTFPGHELLMALRTPN--- 57 Query: 63 TILTLDIGKELVHV-IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ LDI + + IPK Q DP+ L H D L V G V V +PV+ E G Sbjct: 58 VLIALDIDGKSNELAIPKSVQRDPIKGFLEHVDLLLVKRGEKVQVEIPVQTEGELAPGGY 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 V + + A +IP+S+TV + L+ G ++ +DI LP + + + + Sbjct: 118 LLE----HVLSALPVEAEATHIPESVTVSVEGLEAGAAVLAKDITLPSGVTLAVEEDAVV 173 Query: 182 ATIV 185 ++ Sbjct: 174 LQVL 177 >gi|289424136|ref|ZP_06425919.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289428386|ref|ZP_06430072.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|295130101|ref|YP_003580764.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|68053104|sp|Q6AAC8|RL25_PROAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|289154833|gb|EFD03515.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187] gi|289158358|gb|EFD06575.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165] gi|291376922|gb|ADE00777.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137] gi|313765348|gb|EFS36712.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA1] gi|313772663|gb|EFS38629.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL074PA1] gi|313806689|gb|EFS45196.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA2] gi|313810886|gb|EFS48600.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA1] gi|313814603|gb|EFS52317.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA1] gi|313815245|gb|EFS52959.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA1] gi|313826760|gb|EFS64474.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA1] gi|313828550|gb|EFS66264.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA2] gi|313832005|gb|EFS69719.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL007PA1] gi|313834455|gb|EFS72169.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL056PA1] gi|313840312|gb|EFS78026.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL086PA1] gi|314916009|gb|EFS79840.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA4] gi|314916914|gb|EFS80745.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA1] gi|314921555|gb|EFS85386.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA3] gi|314931121|gb|EFS94952.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL067PA1] gi|314954822|gb|EFS99228.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA1] gi|314958988|gb|EFT03090.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA1] gi|314969389|gb|EFT13487.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA1] gi|314974457|gb|EFT18552.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA1] gi|314977353|gb|EFT21448.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL045PA1] gi|314980491|gb|EFT24585.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA2] gi|314985548|gb|EFT29640.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA1] gi|314987504|gb|EFT31595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA2] gi|314989030|gb|EFT33121.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA3] gi|315081845|gb|EFT53821.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL078PA1] gi|315082662|gb|EFT54638.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA2] gi|315087619|gb|EFT59595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA1] gi|315097621|gb|EFT69597.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL038PA1] gi|315099745|gb|EFT71721.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA2] gi|315101950|gb|EFT73926.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA1] gi|315106543|gb|EFT78519.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA1] gi|315110331|gb|EFT82307.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA2] gi|327331620|gb|EGE73359.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA2] gi|327333603|gb|EGE75323.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA3] gi|327335128|gb|EGE76839.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL097PA1] gi|327445369|gb|EGE92023.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA2] gi|327446983|gb|EGE93637.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA1] gi|327449980|gb|EGE96634.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA2] gi|327454824|gb|EGF01479.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA3] gi|327455681|gb|EGF02336.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA2] gi|328755880|gb|EGF69496.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA1] gi|328756663|gb|EGF70279.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA2] gi|328758616|gb|EGF72232.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL020PA1] gi|328761611|gb|EGF75127.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL099PA1] gi|332674942|gb|AEE71758.1| 50S ribosomal protein L25 [Propionibacterium acnes 266] Length = 205 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 118 IAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVA 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|313821706|gb|EFS59420.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA1] gi|313824403|gb|EFS62117.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA2] gi|314926811|gb|EFS90642.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA3] Length = 205 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 118 IAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVA 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|152965021|ref|YP_001360805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] gi|151359538|gb|ABS02541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kineococcus radiotolerans SRS30216] Length = 209 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 8/182 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R GKG+AR +R+ +IPA++YG+ P + L + L + N Sbjct: 1 MAETKLTAEVRTSFGKGAARTIRRASKIPAVVYGHGEAPVHVTLPGHETMIALRNSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +D+ V+PKD Q DP+ + H D L V G VTV VP+ + + Sbjct: 58 VLLDIDVDGTSHLVLPKDVQRDPIKGFIEHVDLLVVRRGEKVTVDVPLHVEGDAAPETV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + +S+ A IP ++TV + L G + D+ LPE T+ + Sbjct: 117 ----VQQELNTLSVEADAAAIPTAVTVSVEGLTAGTHVAASDVTLPEGTTLAGDPEQLVV 172 Query: 183 TI 184 I Sbjct: 173 VI 174 >gi|169830288|ref|YP_001716270.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Desulforudis audaxviator MP104C] gi|226736307|sp|B1I196|RL25_DESAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|169637132|gb|ACA58638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus Desulforudis audaxviator MP104C] Length = 211 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI----SKRLYSK 58 L A R GKG L++NG IPA+IYG + + + + +K + Sbjct: 1 MAVVDLKARPRAGRGKGYRNRLKQNGLIPAVIYGKEVGSLLLEVETRAVQDILTKTGRNA 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + I KD + P + H DF Q+S +T V ++ + Sbjct: 61 LIQLRVEPEKGRAKKYDAIIKDVHMHPYKNEFFHVDFHQISLKDELTTSVNLKLT--GSA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 PG+ GG+L + +V + C NIPD I VD++ L IGD+IH+ D++ PE + + Sbjct: 119 PGVTAGGRLEQLIRQVEVSCLPRNIPDHIEVDVSGLGIGDAIHVSDLKAPEGVKFETDGD 178 Query: 179 ITIATIVAP 187 +T+ T++AP Sbjct: 179 VTVVTLIAP 187 >gi|282853609|ref|ZP_06262946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|282583062|gb|EFB88442.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139] gi|314922165|gb|EFS85996.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL001PA1] gi|314965248|gb|EFT09347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA2] gi|314982385|gb|EFT26478.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA3] gi|315092574|gb|EFT64550.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA4] gi|315094008|gb|EFT65984.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL060PA1] gi|315104560|gb|EFT76536.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA2] gi|327329538|gb|EGE71298.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL103PA1] Length = 200 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 118 IAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVA 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|319940809|ref|ZP_08015148.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] gi|319805691|gb|EFW02472.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B] Length = 214 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G G++R LR+ ++P IIYG + PI L I L + F +IL Sbjct: 1 MKVIATTRTTQGTGASRRLRRADKLPGIIYGGKNPATPIELEHNPIFFALRKEKFHASIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 T+++ + V+ +D+Q+ P ++H DF +++ VT+ VP+ F E SP +K Sbjct: 61 TMELDGKEELVVLRDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLHFSGEELSPAVKIDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++ V + C ++P+ I VDL+ ++ G ++H D+ +PE ++ + IA++ Sbjct: 121 CIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEGVKMVT--DSVIASV 178 Query: 185 VAP 187 + P Sbjct: 179 IQP 181 >gi|320532195|ref|ZP_08033062.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] gi|320135595|gb|EFW27676.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 171 str. F0337] Length = 203 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKGSAR R+ GQ+P ++YG+ ++P+ + L L S + Sbjct: 1 MANNAITLKAQDRTEFGKGSARQARRAGQVPVVVYGHGTEPRHLLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G+ + V+ KD Q P+ + H DFL V V V VPV I Sbjct: 61 ALVELVIDGGE-TLLVLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGTAAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + + PA ++P++I VD+ D+ G + + DI LP+ ++S + Sbjct: 118 ---GTMHMIEAATIMVSAPAVSVPETIEVDITDVAAGTVLTIADITLPKGVEAVSDADTA 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVA 179 >gi|269219243|ref|ZP_06163097.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] gi|269211390|gb|EEZ77730.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 848 str. F0332] Length = 200 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+ R GKG++R LR++G+ PA++YG+ SDP I+ + +I + + Sbjct: 4 KIQVDRRKSFGKGASRQLRRDGRTPAVVYGHGSDPVHISFDSHEIFLATKGQANPILTIE 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L+ + V+ K+ Q +P++ I+ H D L+V +G V V VPV E+ G Sbjct: 64 LEG--KEQLVLVKELQRNPLTRIIEHLDLLRVKQGEKVDVEVPVEVTGESFP-----GTI 116 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V V + PA IP++I VD+ K G+++ + D+ P + + I Sbjct: 117 HTVELMHVLVKAPATAIPEAIVVDVEGRKDGENVTVADLTFPAGVEVETDPESIVVVIAI 176 Query: 187 PIS 189 P S Sbjct: 177 PSS 179 >gi|220915259|ref|YP_002490563.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] gi|254801032|sp|B8J805|RL25_ANAD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219953113|gb|ACL63497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaeromyxobacter dehalogenans 2CP-1] Length = 240 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + Sbjct: 1 MAENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+L L + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ Sbjct: 61 TLLELQVDGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + Sbjct: 119 EGGILSVATHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVV 178 Query: 183 TIVAP 187 + P Sbjct: 179 FVAVP 183 >gi|144898693|emb|CAM75557.1| 50S ribosomal protein L25 [Magnetospirillum gryphiswaldense MSR-1] Length = 200 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 5/193 (2%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E + A +RD+ GKG+AR R+ G++P +IYG DP IA+ + I L+ F Sbjct: 1 MTEISAIVAELRDRAGKGAARATRREGKVPGVIYGGKQDPICIAIDPRVIWAELHKPGFK 60 Query: 62 TTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + +D+ + +D Q PVSD +H D ++VS + V V VPV IN +KSPG Sbjct: 61 TRLFDVDLAAGGKHRCLCRDVQFHPVSDQPVHIDLMRVSADAVVHVKVPVHVINADKSPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNI 179 +K GG +++ HEV + C + IP I +DL +G S+H+ D+ LP + Sbjct: 121 VKAGGVVSLELHEVEVTCAPDLIPSEIVIDLAGKDVGYSVHVNDLGLPAGVTPYHVGAKA 180 Query: 180 TIATIVAP--ISG 190 + TIV P G Sbjct: 181 GVLTIVPPTVKGG 193 >gi|148284981|ref|YP_001249071.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Boryong] gi|166223699|sp|A5CF34|RL25_ORITB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146740420|emb|CAM80897.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong] Length = 207 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 2/186 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L +R G SAR LR+ G++P +IY P + K+++K F Sbjct: 1 MNEMLTLVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAKLYRKPFFS 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG-STVTVHVPVRFINENKSPG 120 +T++ L + + V+PK QL PV++ + H DF+ V + S V VP+ F + KS G Sbjct: 61 STVIQLQVDDQRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKEKSLG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 IK+GG LN+V V LLCP + IP I D+ ++ +G SI + + LPE + + S + Sbjct: 121 IKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLVKSTTDY 180 Query: 180 TIATIV 185 IA+++ Sbjct: 181 VIASVI 186 >gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062] Length = 204 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 2/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A +R++ GKG+AR R+ G +PA+IYG+ + I L K+ + L+ F Sbjct: 1 MAN-SYELKAQVRERAGKGAARAARREGLVPAVIYGDKKEAVSINLPLKEATMTLHKGGF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ + T+D+ E VI KD+QL PV D L+H DFL+VS +T+TV +PV+F+NE SPG Sbjct: 60 LSHVGTIDLNGEKTSVIAKDFQLHPVKDTLMHVDFLRVSADATLTVEIPVKFLNEETSPG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT-SSMSQLNI 179 +K+GG LNVV H V + PA IP++I VDL + +G S H+ ++LP +++ + Sbjct: 120 LKRGGVLNVVRHTVEMTVPATAIPEAIEVDLAEADLGSSQHISAVKLPAGCAPTITDRDF 179 Query: 180 TIATIVAPIS 189 TI+TI AP Sbjct: 180 TISTIAAPAG 189 >gi|289642500|ref|ZP_06474644.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] gi|289507674|gb|EFD28629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Frankia symbiont of Datisca glomerata] Length = 213 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E ++ A R + GKG AR RK G++PA++YG+ P+ I+L A D+ + Sbjct: 1 MSEVRIVAEPRTEFGKGGARRTRKAGKVPAVLYGHGQPPRHISLRAHDLLHAFKTDAGTN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L++ +PKD Q P+ H D + + G VT + + Sbjct: 61 VLLRLELSDGTQLALPKDVQRHPIKGSFEHVDLVIIRRGERVT-----VEVPVTVVGTAE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++ VSL A +IP SI VD+ K G +I + +P T + + Sbjct: 116 SDTLVDQQLTSVSLQAAATDIPGSIEVDVTGFKAGANISAGQLVIPAGTVLETDPEQVVV 175 Query: 183 T-IVAPISG 190 + P + Sbjct: 176 QGLAKPTAA 184 >gi|171464201|ref|YP_001798314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226736348|sp|B1XS65|RL25_POLNS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171193739|gb|ACB44700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 214 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ A R G ++R LR +G+ P I+YG+ I L + L + F ++IL Sbjct: 1 MKVVAFERSVQGTSASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 L+IG + V+ +DYQ+ P +++H DF +VS V + VP+ F N + S +K QG Sbjct: 61 DLEIGGKTQKVLLRDYQMHPFKPLVLHIDFQRVSATKKVHMRVPLHFTNADTSAAVKLQG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ---LNITI 181 ++ + E+ + ++P+ I VDL +++G IH +DI LP+ + + N + Sbjct: 121 AVISHIATELEVSYLPADLPEFIEVDLAKIEVGHGIHAKDIALPKGVTLILHVEQENPVL 180 Query: 182 ATIVAP 187 A P Sbjct: 181 ANARIP 186 >gi|119961664|ref|YP_947125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] gi|119948523|gb|ABM07434.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter aurescens TC1] Length = 191 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R GQIPA+IYG+ ++P I L + + + N Sbjct: 1 MSEQKLTAELRTEFGKGFARRARMAGQIPAVIYGHGAEPIHINLPGRATTLAVRVSN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +D+ E + KD Q DPV I+ H D V G VTV + + E + Sbjct: 58 ALLAIDVDGEQHLTLVKDIQRDPVKQIIEHVDLQTVKAGEKVTVDIAIHVSGEVAPGAV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++ VSL A ++P ++ V ++ LK G+SIH D+ LP+ ++ +++ + + Sbjct: 117 ----ASLEATTVSLEAEATHVPTAVEVTIDGLKAGESIHASDLVLPKGSTLLTEGDTLVV 172 Query: 183 TI 184 I Sbjct: 173 RI 174 >gi|311743169|ref|ZP_07716977.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] gi|311313849|gb|EFQ83758.1| 50S ribosomal protein L25 [Aeromicrobium marinum DSM 15272] Length = 228 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 9/186 (4%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E K++A R + GKG+AR +R+ Q+PA++YG+ SDP + L D+ L + N Sbjct: 8 AEIKIAAQTRTEFGKGAARRIRRADQVPAVLYGHGSDPVHVTLPGHDLMLALKNSN---A 64 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 +L++D+ VIPK Q DP+ + HAD L V +G VTV +P+ + + + Sbjct: 65 LLSIDLDSGSHLVIPKQVQRDPLKGFIEHADLLIVKKGEKVTVDIPLTLVGQAGPDTL-- 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + VS+ A +IP+ I V + L G+ I +D+ LP+ ++ + + Sbjct: 123 ---VVTENSTVSIEAEATHIPNEIEVSIEGLAAGEQILAKDLVLPKGSTIAGDEDQLMIN 179 Query: 184 IV-API 188 IV AP Sbjct: 180 IVNAPS 185 >gi|114565644|ref|YP_752798.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319178|sp|Q0B0S7|RL25_SYNWW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|114336579|gb|ABI67427.1| LSU ribosomal protein L25P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 209 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 3/183 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-L 65 KL+A R+ +G L+++ Q+PA+IYG + PI L +++++ L Sbjct: 5 KLNARKREIKNRGYLNQLKRSEQVPAVIYGKGEEAVPIILEKRELNRIFNVHGSRGLFSL 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + + ++ Q +PVS LIH DFL V+ + +V V + +K+GG Sbjct: 65 EIEGESKPMMTLIREIQRNPVSGQLIHLDFLSVNLNEKINSNVGVLL--GGEEEVMKKGG 122 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L EV +LC ++P+ ++ D++ L+IG+++H+ D+ +P +++ IA+I+ Sbjct: 123 ILQAGLKEVEVLCFPQDLPEYLSADISSLEIGETLHVADLIVPAGVEILTEAESVIASIL 182 Query: 186 API 188 AP Sbjct: 183 APS 185 >gi|86156549|ref|YP_463334.1| 50S ribosomal protein L25/general stress protein Ctc [Anaeromyxobacter dehalogenans 2CP-C] gi|109893342|sp|Q2IM61|RL25_ANADE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|85773060|gb|ABC79897.1| LSU ribosomal protein L25P [Anaeromyxobacter dehalogenans 2CP-C] Length = 240 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E LSA R + GKG AR LR+ G IPA++YG +P +AL + K + + + Sbjct: 1 MAENVLSAQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+L L + HV+ KDY +DPV+ L+HADFL+VS V V+ V + ++ G+ Sbjct: 61 TLLELQVEGASKHVLFKDYTVDPVTRKLLHADFLEVSMDQPVKVN--VPVVTVGRAAGVA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+V H + + N IP I VD+ +LKIG S+H+ +++ PE Q + + Sbjct: 119 EGGILSVAAHAIVVEALPNKIPVRIEVDVTELKIGRSLHVSELKAPEGCKFKFQTDYVVV 178 Query: 183 TIVAP 187 + P Sbjct: 179 FVAVP 183 >gi|239948215|ref|ZP_04699968.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] gi|239922491|gb|EER22515.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes scapularis] Length = 203 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG I+L K+I+K F+ Sbjct: 1 MSEILELEAKSRVEFGTGAARALRREGRVPAIIYGAGKTSVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFIFLEE-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSLKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|158522828|ref|YP_001530698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] gi|226736308|sp|A8ZXZ4|RL25_DESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|158511654|gb|ABW68621.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus oleovorans Hxd3] Length = 217 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 3/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L R G + + LR+ G +PAI+YG+ +DP P+A+ L Sbjct: 1 MELKELQVKTRQMAGGPTPKALRRQGFVPAIVYGHKNDPLPLAVDDHTFRLLLKDAGQQA 60 Query: 63 T-ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L +D G V+ K+ Q PVS LIHADF +V +T +VPV G Sbjct: 61 LLSLVIDDGAASKTVMLKELQQHPVSLKLIHADFHEVDLTKKITTYVPVATT--GVCKGE 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L ++ E+ + C IP+SI +D++ L IGDS+H+ DI PE + ++N T+ Sbjct: 119 KEGGVLQLIRRELEVRCLPGLIPESIAIDISALDIGDSVHVADIEAPEGVELVHEVNFTV 178 Query: 182 ATIVAP 187 + AP Sbjct: 179 IAVAAP 184 >gi|154246548|ref|YP_001417506.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] gi|226694603|sp|A7IIK6|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter autotrophicus Py2] Length = 203 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 86/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L AV R + GKG+AR R+ G++PA+IYG +P I+L+ ++I+K +Y+ +F+ Sbjct: 1 MTAIKELKAVARPRAGKGAARAERRAGRVPAVIYGEKQEPVTISLNFREINKTIYAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +D+ VIP+DYQLD V D +H DFL+VS+G+TVTV VPV F+N+ SP + Sbjct: 61 TTLFEIDVDGTKHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVTVEVPVHFLNQEASPAL 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG LNVV H V L CPA +IP S+ VDL GD+ H+ I+LP + + T+ Sbjct: 121 KAGGTLNVVAHAVELECPAESIPASVEVDLTGAAYGDTFHLSGIKLPAGVTWAGHGDDTL 180 Query: 182 ATIVAPIS 189 AT+VAP Sbjct: 181 ATVVAPSG 188 >gi|188584704|ref|YP_001916249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] gi|226736340|sp|B2A3N5|RL25_NATTJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|179349391|gb|ACB83661.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 215 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 3/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +L R K + LR N +IPA++YG + K +++ +++ L + Sbjct: 1 MDRKELQVKERTVTRKSEVKKLRTNNEIPAVLYGKNIESKKLSIEKRELLDALSTAAGDN 60 Query: 63 TILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L + E I K+ Q DP+ IH DF + T+ V VP+ + G+ Sbjct: 61 VLLDLKLDNGESYPAIFKEIQKDPIKGFFIHIDFHTIDLKETLQVSVPLNIE--GEPVGV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + GG E+ + C IPD I VD++++ + +SI++ D+ LPE + +++ T+ Sbjct: 119 ENGGIPQYQLREIEIECLPTQIPDHIEVDVSNIDLNESINVGDLPLPEGSELVTEPEETV 178 Query: 182 ATIVA 186 ++VA Sbjct: 179 MSVVA 183 >gi|220912060|ref|YP_002487369.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] gi|219858938|gb|ACL39280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter chlorophenolicus A6] Length = 204 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ ++P I L AK + + + N Sbjct: 1 MSEQKLAAELRTEFGKGYARRARMANLIPAVIYGHGAEPIHITLPAKATTLAVRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI E + KD Q DP+ I+ H D L V +G VTV V V E+ + Sbjct: 58 ALLSLDINGEGHLALVKDIQRDPIKQIIEHIDLLTVRKGEKVTVDVAVHVAGESAPGTV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 N+ VSL A ++P ++ V + G+ IH D+ LP+ ++ + Sbjct: 117 ----HNLELTTVSLEAEATHLPTAVEVSIEGRAAGEHIHASDLVLPKGVVLLTDAEALVV 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|187735963|ref|YP_001878075.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] gi|226736273|sp|B2UL21|RL25_AKKM8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|187426015|gb|ACD05294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Akkermansia muciniphila ATCC BAA-835] Length = 201 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R G G+ + LR G +P ++YG D I + A++ ++ L S Sbjct: 1 MATSH-SLKAETRA-CGSGNLKQLRSQGLVPGVVYGPGFDNVNIQVDAREFARMLASAVS 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LDI ++V V+ K+ Q +P+++ +H DF V++ + + VPV S G Sbjct: 59 EHILVALDINGKIVKVLLKEVQHNPITNACLHVDFQAVTDTTVIHSIVPVILE--GDSAG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L+ HE++++C ++P++IT D++ LK+G+S+ + D++LP ++ ++ Sbjct: 117 VALGGVLDQTIHELAIICQVKDLPEAITADISGLKLGESLRITDLKLPSGVTTELAGDVI 176 Query: 181 IATIVAPI 188 +A + AP Sbjct: 177 VAIVEAPR 184 >gi|78042985|ref|YP_359067.1| 50S ribosomal protein L25/general stress protein Ctc [Carboxydothermus hydrogenoformans Z-2901] gi|109893351|sp|Q3AFL7|RL25_CARHZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|77995100|gb|ABB13999.1| ribosomal protein L25 [Carboxydothermus hydrogenoformans Z-2901] Length = 197 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K++A +R K +G L K G++P ++YG +P +A++A+++ + + Sbjct: 3 KITASVRLKKTRGERNRLLKEGKVPGVMYGKNIEPVAVAVNARELESLVERG---LKLFE 59 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + + V+ K+ Q PV+ LIH DF V G + VPV + G+K GG Sbjct: 60 LSVEGKTQRVLVKELQHHPVTGKLIHVDFQVVESGRKIRQLVPVEL--YGEPAGVKAGGI 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L EV++ C ++P+ I D++ L++GD + ++D+ LP + IA I A Sbjct: 118 LEHGLSEVTVECLPEDLPEFIEADVSKLEVGDCLRVKDLELPPGVRVIEDPESIIALISA 177 Query: 187 PI 188 P Sbjct: 178 PR 179 >gi|289178670|gb|ADC85916.1| LSU ribosomal protein L25P [Bifidobacterium animalis subsp. lactis BB-12] Length = 244 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 9/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R +IPA IY P + L ++ S L N Sbjct: 37 MANNSIVLEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN- 95 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 96 --ALFTIKFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPVFVEGTPKGGA 153 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 V E+ + +N+P+ I V + L+ GD+I D+ LPE ++ Sbjct: 154 -----IAVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPEGVELDIADPEE 208 Query: 180 TIATIVAP 187 ++ TI P Sbjct: 209 SVVTIEIP 216 >gi|329948076|ref|ZP_08294977.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] gi|328523215|gb|EGF50316.1| ribosomal protein L25, Ctc-form [Actinomyces sp. oral taxon 170 str. F0386] Length = 203 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R GKGSAR R+ GQ+P ++YG+ ++P+ L L S + Sbjct: 1 MANNAITLKAQVRTDFGKGSARQARRAGQVPVVVYGHGAEPRHFLLEEHATRLALRSNDN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L +D G+ + V+ KD Q P+ + H DFL V V V VPV I Sbjct: 61 ALVELVIDGGE-TLLVLGKDVQRHPIRPGVQHVDFLLVDRNERVDVEVPVTVIGTAAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + + PA ++P++I VD+ + G + + DI L E ++S Sbjct: 118 ---GTMHMIEAATIMVSAPAVSVPEAIEVDITGVAAGTVLTIADITLSEGIEAVSDAETA 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVA 179 >gi|295396693|ref|ZP_06806839.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] gi|294970439|gb|EFG46368.1| 50S ribosomal protein L25 [Brevibacterium mcbrellneri ATCC 49030] Length = 218 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 6/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL A +R+ GKG AR R G++P ++YG ++P ++ I + + N Sbjct: 1 MADIKLEAELRENYGKGYARRTRAAGRVPGVLYGRGNEPAHLSFDGHAIMMAMKNPN-SL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ GK + +D Q PV +IH DF+ V G + V +PV + E + Sbjct: 60 VEISTADGKVKSLAVARDIQRHPVRRDIIHVDFIIVKRGEKIEVEIPVSPVGEAAPGTL- 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 ++V + +L IP+ + + D K+G+ + +D+ LPE + + + Sbjct: 119 ----VSVETQTLRVLADPTQIPELFELSIEDRKVGEHVFAKDVELPEGVELIDDEEMMLI 174 Query: 183 TIVA 186 + A Sbjct: 175 HVAA 178 >gi|169628236|ref|YP_001701885.1| 50S ribosomal protein L25 [Mycobacterium abscessus ATCC 19977] gi|169240203|emb|CAM61231.1| 50S ribosomal protein L25 [Mycobacterium abscessus] Length = 215 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%) Query: 1 MDQKEC----KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY 56 M +K L +R GKG++R R++GQ+PA++YG+ + P+ + L A D + L Sbjct: 1 MSKKNTPTSNNLDVTVRTDTGKGASRRARRDGQVPAVLYGHGTTPEHLNLPAHDFAAVLR 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + ILTL+I + K ++ P+ L+HAD L V +G VTV V V + Sbjct: 61 H-SGTNAILTLNIEGREQLALTKTIEIHPIRRNLVHADLLVVRKGEKVTVEVTVHIEGDA 119 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 S + + + + + A +IP+ +TV + L+ G I I LP+ + +S Sbjct: 120 ASGTL-----VTQDANTLEIEAEALSIPEGLTVSVEGLEAGTQITAGSIELPKGVTLISD 174 Query: 177 LNITIATIV-APISG 190 + +V AP + Sbjct: 175 PETLVVNVVTAPTAA 189 >gi|313835378|gb|EFS73092.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA2] gi|314929235|gb|EFS93066.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL044PA1] gi|314972372|gb|EFT16469.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA3] Length = 200 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G+E + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ + +D+ L+ G +I++ D++LPE TS + AT+V Sbjct: 118 IAMTEFNEIEVQADLLNIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATVV 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|262201499|ref|YP_003272707.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] gi|262084846|gb|ACY20814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gordonia bronchialis DSM 43247] Length = 210 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 7/191 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL+ R + GKG+AR R+ G++PA++YG+ +DP+ ++L A++++ L N Sbjct: 1 MATETTKLAVTTRTEKGKGAARRARREGKVPAVLYGHRTDPQHLSLPARELAAILR-ANG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ LDI + K + P+ + + H D L + G VTV V + + Sbjct: 60 TNAIIDLDIEGTSQLALTKQIDVHPIRNYIEHVDLLVIRRGEKVTVEVTIVVEGDAAPGT 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + V + A +IP+ ITV + G S+H D+ LP+ S +S Sbjct: 120 L-----VVQDASVVEIEADALSIPEQITVSVEGTAAGVSVHAADLDLPQGVSLVSDPETL 174 Query: 181 IATIV-APISG 190 I I AP + Sbjct: 175 IVAINEAPTAA 185 >gi|332798112|ref|YP_004459611.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] gi|332695847|gb|AEE90304.1| 50S ribosomal protein L25 [Tepidanaerobacter sp. Re1] Length = 210 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 105/186 (56%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A +R K + L++ G++PA++YG + I++ K++S+ L S+ + Sbjct: 1 MEHPVLTAAVRQAA-KSENKKLKREGKVPAVVYGKGYETTSISVDDKELSRILKSR-GES 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ L++ E V+ K+ Q + + + + H DF +VS V ++P+ + G+K Sbjct: 59 SLINLELNGEAFPVLIKEVQRNVLKNSMEHVDFFKVSMDEEVEYNLPIVLK--GDAKGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L EV++ N++ D+I +D++D+ IGD++ + D+++ +K + + + I Sbjct: 117 EGGVLQHQKREVAVKSLPNDMLDNIEIDISDMDIGDTLTVADLKIGDKNTVLDDPDEVIV 176 Query: 183 TIVAPI 188 +++AP Sbjct: 177 SVLAPR 182 >gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25P [Magnetococcus sp. MC-1] gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus sp. MC-1] Length = 198 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKNFMTTI 64 V R+ +GKG AR LR+ G+IPA++YG + + ++ + T+ Sbjct: 3 TFETVTREGLGKGVARKLRQQGRIPAVVYGAGKENISLEMNLNAFRVAIAGQGPTLFNTV 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L + ++ +V+ + Q PV+D+ H DFL++ +TVHVPV NE+++PG+K+G Sbjct: 63 HQLSVDGKVENVLVRGVQRHPVTDLPEHVDFLRLDPTKMITVHVPVHLRNEDQAPGLKRG 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +V HE+ + C + NIP I VD +++IG SIH+EDI LPE T + +N T Sbjct: 123 GIIQIVRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIEDITLPEGTKVFTDVNFT 178 >gi|217967173|ref|YP_002352679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] gi|226736311|sp|B8DZY2|RL25_DICTD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217336272|gb|ACK42065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus turgidum DSM 6724] Length = 207 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ RDK+GK A+ R++ IP ++YG ++ + I + KD+ + + Sbjct: 1 MEITEIKVKKRDKIGKQFAKKYRRSNLIPGVVYGAHLKENIHILVEKKDLWSLIKKGHAK 60 Query: 62 TTILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 L I + I +D Q+DP+ D +H DF ++ V V+VP+ + E Sbjct: 61 EQHLLRLIIENGENTITENAILQDLQIDPIKDEFLHVDFHAITLEELVDVYVPILLVGEA 120 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 K GIKQGG L E+ + ++P I VD+ DL+IG+SI + D++ PE ++ Sbjct: 121 K--GIKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGESITVGDLKFPENIKVLTP 178 Query: 177 LNITIATIVAPIS 189 L+ + I+ P Sbjct: 179 LDEVVVGIIPPKG 191 >gi|300790048|ref|YP_003770339.1| 50S ribosomal protein L25 [Amycolatopsis mediterranei U32] gi|299799562|gb|ADJ49937.1| large subunit ribosomal protein L25 [Amycolatopsis mediterranei U32] Length = 199 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + ++ + +N Sbjct: 1 MSEVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFARVVR-ENGSN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TLD+ + + K + P+ + + H D L V G + V VPV G+ Sbjct: 60 AVITLDLEGSVELALTKTIVVHPLKNYIEHVDLLVVKRGEKIVVDVPVVVTGNPGPGGLV 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + A +IP+ V + L+IG + + LP+ + ++ + Sbjct: 120 NQDVD-----TLQVEVEALHIPEQFEVSIEGLEIGSQVLAGQVELPQGATLVTDPESLVV 174 Query: 183 TIVAP 187 + P Sbjct: 175 AVNEP 179 >gi|301060863|ref|ZP_07201672.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] gi|300445037|gb|EFK08993.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2] Length = 229 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 5/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A +R + GKG+AR LR+N QIPAI YG DP + + + + + Sbjct: 1 MSQLALAAHIRTETGKGAARRLRQNNQIPAIFYGPGVDPIMLRIEYSRLLELEKAGKGEN 60 Query: 63 TILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 IL L I G+ + V+ K+ +DP+ + +HADF ++S +T+ +PV +N Sbjct: 61 AILDLKIHTDQGETIKKVMVKELTVDPLKNTFVHADFYEISNDREITLPIPVHLLNTPIG 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 ++GG L + EV++ C + + + + +D+ DL +GD++ + D+ LPE M + N Sbjct: 121 VA-EEGGILQQIRREVTITCFPDKLIEFLEIDIADLNVGDTVRIGDLELPEGIQIMEEPN 179 Query: 179 ITIATI 184 +T+A + Sbjct: 180 LTVAVV 185 >gi|271969795|ref|YP_003343991.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] gi|270512970|gb|ACZ91248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptosporangium roseum DSM 43021] Length = 199 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 10/182 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E + A R++ GKG+AR +R+ ++P ++YG+ +DP+ + L ++ L + N Sbjct: 1 MSEVVIKAESRNEFGKGAARKIRRENKVPVVLYGHGTDPQHLTLPGHELLLALRTPNV-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G +PK Q DP+ L H D L V G VT+ +PV + G Sbjct: 59 --LIRLEGAAAELALPKGVQRDPIRGFLEHVDLLLVKRGEKVTIDIPVTVV------GEV 110 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G L+ VS+ A +IP + VD+ ++IG D++LPE TS ++ + Sbjct: 111 ADGILDQQLVSVSVESEATHIPTGVEVDVEGMEIGTQFTAGDLKLPEGTSLIADPETLVL 170 Query: 183 TI 184 + Sbjct: 171 HV 172 >gi|209523976|ref|ZP_03272528.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] gi|209495648|gb|EDZ95951.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira maxima CS-328] Length = 201 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R K R LR+ G IPA++YG+ ++ + + + AK + T Sbjct: 2 EITVQCQKRPSGSK--PRALRREGLIPAVLYGHKGAESEELTIDAKSAENLMKKGAVNHT 59 Query: 64 ILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q P H F V +V V +P+ FI E Sbjct: 60 LIQLNIPDLSWAGKALLREVQTHPWKGFPYHLSFFSVGTLESVEVTIPLNFIGEPIGV-K 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG L++V EV + C NIP++I V+++ L++GD++H+ +++LPE +++ + + Sbjct: 119 NSGGMLDLVITEVQVNCKPGNIPEAIDVEVSSLEVGDALHISELQLPEGVEVIAEADQVV 178 Query: 182 ATIVAPISG 190 A+I+ G Sbjct: 179 ASILYRGGG 187 >gi|328908364|gb|EGG28123.1| ribosomal L25P family protein [Propionibacterium sp. P08] Length = 200 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R+N ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G+E + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ + +D+ L+ G +I++ D++LPE TS + AT+V Sbjct: 118 IAMTESNEIEVQADLLNIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEAVAATVV 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|189499938|ref|YP_001959408.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides BS1] gi|226736296|sp|B3EPZ5|RL25_CHLPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189495379|gb|ACE03927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium phaeobacteroides BS1] Length = 209 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + RD K +A+ LR G++PA++Y + I + + + K ++S Sbjct: 1 MESIVFNVEPRDCD-KNAAKKLRDQGKVPAVVYHKGEETIHICVDERSLKKLVHSSESHL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LT GKE K+ Q DPV+D +IHADF S G + + VP FI E ++PG+ Sbjct: 60 IDLTFPDGKEK-RSFLKEVQFDPVTDKIIHADFQFFSAGEVLEMDVPTTFIGEGEAPGVV 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EK-TSSMSQLNI 179 GG + V+ H + + +NIP IT+D++ +++G ++H+ +I + E +S + Sbjct: 119 AGGNVQVILHSLKVKAVPSNIPQHITIDVSGMELGQTMHIREIPVETYEGKFEIISDPDS 178 Query: 180 TIATIVAPI 188 ++ +IVAP Sbjct: 179 SVVSIVAPK 187 >gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris DX-1] Length = 229 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 115/188 (61%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+ Sbjct: 1 MTSVLELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEEKELRLRILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI + + + VIP+DY LDPV D +H DFL++ G+T+ + VP+ +PG+ Sbjct: 61 TTIFDVVLDGQKHRVIPRDYHLDPVKDFPLHVDFLRLGAGATIRISVPLHLKGLEVAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V H V L PA+NIP I D+++L IG S+H+ DI LP S+S+ ++T+ Sbjct: 121 KRGGTFNIVTHTVDLEAPADNIPQFIEADVSNLDIGVSLHLSDIALPTGVKSVSREDVTL 180 Query: 182 ATIVAPIS 189 TIV P Sbjct: 181 VTIVPPSG 188 >gi|88856042|ref|ZP_01130703.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] gi|88814610|gb|EAR24471.1| 50S ribosomal protein L25 [marine actinobacterium PHSC20C1] Length = 208 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +K + RD GKG+AR LR G+IPA+IYG+ +DP +AL +I L N Sbjct: 1 MAKKAVNHVVTDARDSFGKGAARKLRALGKIPAVIYGHGTDPIHVALPGHEIGLILRKSN 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 IL LDI + + KD Q DPV I+ H D + + +G V V VP+ + E+ Sbjct: 61 ---QILDLDINGKSQLALVKDVQKDPVRQIIEHIDLVVIRKGEKVIVDVPIHLVGESAP- 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G N+ VS+ A +IP+ TVD+ + GD I+ +D+ L E + +S + Sbjct: 117 ----GTIANLDAPTVSVEAEATHIPEYFTVDIEGREEGDHIYAKDVTLVEGSELLSDPEL 172 Query: 180 TIATIVAPIS 189 + + P S Sbjct: 173 LVVGVSTPRS 182 >gi|134297987|ref|YP_001111483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum reducens MI-1] gi|172044207|sp|A4J0Q5|RL25_DESRM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134050687|gb|ABO48658.1| LSU ribosomal protein L25P [Desulfotomaculum reducens MI-1] Length = 210 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+A +R K + +R NG IP ++YG I++ AKD+ L S Sbjct: 1 MADTALNANLRKTATKSIVKEIRNNGGIPGVVYGKHVGSMAISVDAKDLKNILGSVTGRN 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ ++I V+ K Q+DP+ + H DF QVSE + + +PV+ + K G+ Sbjct: 61 TLINMNINGSKQTVMVKSLQMDPMHQNIRHVDFQQVSENTKIRTVIPVQLVGTPK--GVA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI- 181 GG + + C N IP++I VD++ L+IGD++ + D+ LP + + T+ Sbjct: 119 MGGVIQHDLRSAEIECLPNRIPEAIQVDISGLEIGDTLSVSDLNLPPGVKILDHPHTTVV 178 Query: 182 --ATIVAP 187 ATI AP Sbjct: 179 GLATIKAP 186 >gi|254384997|ref|ZP_05000332.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] gi|194343877|gb|EDX24843.1| 50S ribosomal protein L25 [Streptomyces sp. Mg1] Length = 196 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E KLSA +RD GKGSAR R++ PA+IYG+ +DPK + + A + L + N Sbjct: 1 MSMSEVKLSAQIRDTFGKGSARQARRDALTPAVIYGHGTDPKHVNVDAHALQLALRTPN- 59 Query: 61 MTTILTLDIGKE-LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++LD+G VIPK Q P+ + H DFL V +G VTV V + + + Sbjct: 60 --VLISLDLGDAGTELVIPKAVQKHPLKRSVSHVDFLIVKKGEKVTVDVAIVTEGDLAAG 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G L + + +S+ A +IP +TV + L+ G +IH D+ LP+ T+ +I Sbjct: 118 G----NMLETLQNTISVEAEATHIPTEVTVSIAGLEAGATIHASDLVLPKGTTLAVDGDI 173 Query: 180 TIATIV 185 + +V Sbjct: 174 AVLQVV 179 >gi|224368790|ref|YP_002602951.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfobacterium autotrophicum HRM2] gi|259646683|sp|C0QAZ0|RL25_DESAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223691506|gb|ACN14789.1| RplY [Desulfobacterium autotrophicum HRM2] Length = 216 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R GK +AR LR N +PA++YG D PI++S D++ + Sbjct: 1 MELIDLKAEPRKGRGKSAARHLRNNDAVPAVLYGAKMDSMPISVSTLDLTTMVRVHGSSG 60 Query: 63 TILTLDIGKEL---VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L I + V+ K+ Q+D +H DF ++ +T+ VPV + +S Sbjct: 61 LFINLAINGDTVPSRTVMLKEIQMDTFDLKYLHVDFQAINVSEKITISVPVEAV--GESV 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+K GG + ++ E+ ++C ++P+ I +D DL++GDS+H+E+I L +N Sbjct: 119 GVKAGGMIQLIRRELDIICKPGDMPEVIQIDTTDLEVGDSVHVEEIDLGADVEIPHDVNF 178 Query: 180 TIATIVAPIS 189 T+ T+V P S Sbjct: 179 TVLTVVPPTS 188 >gi|87122995|ref|ZP_01078855.1| probable ribosomal protein L25 [Marinomonas sp. MED121] gi|86161732|gb|EAQ63037.1| probable ribosomal protein L25 [Marinomonas sp. MED121] Length = 192 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R + GKG++R LR ++PA+IYG + P+ I + ++ K +++F TT+ Sbjct: 2 TLSINAVARSEEGKGASRRLRLANKVPAVIYGGDAAPQSITFAENELKKITENQDFFTTV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + + + VI K Q P S ++H DFL+V E +T +P+ F+ S G+K Q Sbjct: 62 VEVVTDGKAEKVIVKALQRHPASPAVMHVDFLRVDEARVITTRIPLNFVGAATSEGVKSQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----SQLN 178 GG+L+V + C N+P ++ VD ++GD H+ D +LPE + + N Sbjct: 122 GGRLSVEAKLAEVRCLPANLPAALEVDCTKAQLGDIFHLSDAQLPEGVELVALLKGNDHN 181 Query: 179 ITIATI 184 I I Sbjct: 182 QPIGRI 187 >gi|317124066|ref|YP_004098178.1| 50S ribosomal protein L25P [Intrasporangium calvum DSM 43043] gi|315588154|gb|ADU47451.1| LSU ribosomal protein L25P [Intrasporangium calvum DSM 43043] Length = 227 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KLSA R GKG+AR +R+ G IPA++YG+ + P I L D + L N Sbjct: 1 MSDAT-KLSAEKRTDFGKGAARKIRRAGNIPAVMYGHGTAPVHITLPGHDTFQALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LT+ + + + KD Q DP+ I+ H D + V +G VTV +PV E Sbjct: 59 --ALLTIVVDGKEALALAKDIQRDPIKPIIEHVDLVVVRKGEKVTVEIPVHLEGEAAPET 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + + + A +IP+++ + + L G I + LPE T+ + Sbjct: 117 V-----VTLDHSSLQVEAEATHIPENVVISIEGLPAGTQILAGAVTLPEGTTLATDPEAL 171 Query: 181 IATIV 185 + + Sbjct: 172 VVNVT 176 >gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium japonicum USDA 110] gi|71153127|sp|Q89DJ8|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 118/189 (62%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +L A R K GKG+AR R+ G++P +IYGN P I++ +++ +R+ + F Sbjct: 1 MATTVKELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TT++ +D+ + VIP+DY LDPV D IH DF+++ EG+T+ + VP+ + SPG Sbjct: 61 LTTLVDIDLEGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG +N+V H + L C +IP I D+ L+IG S+H+ D++LP ++++ + T Sbjct: 121 VKRGGTVNIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTREDAT 180 Query: 181 IATIVAPIS 189 + TIV P Sbjct: 181 LVTIVPPSG 189 >gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter piechaudii ATCC 43553] Length = 216 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 4/190 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A R G ++R LR+ G++PAI+YG + P I L +I L + F +I Sbjct: 13 SMKFIATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASI 72 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L + + G + V+ + Q ++H DF +V + VP+ F+N SP +K Sbjct: 73 LQMQLEGSKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEISPAVKL 132 Query: 124 G-GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--SQLNIT 180 ++ V E+ + C +P I VDL ++ G SIH+ DI+LP + + + Sbjct: 133 AGAMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADIKLPMGVTYVPHGGEDNP 192 Query: 181 IATIVAPISG 190 + G Sbjct: 193 LLAAAIVKGG 202 >gi|313792871|gb|EFS40938.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA1] gi|313802676|gb|EFS43898.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA2] gi|314964289|gb|EFT08389.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA1] gi|315078695|gb|EFT50726.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA2] gi|327456830|gb|EGF03485.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL092PA1] Length = 205 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARHIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + AT+ Sbjct: 118 IAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAEDVAATVA 177 Query: 186 AP 187 P Sbjct: 178 FP 179 >gi|326796206|ref|YP_004314026.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] gi|326546970|gb|ADZ92190.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1] Length = 192 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 99/186 (53%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + GKG++R LRK G +PA+IYG ++ + + ++ K + + F+T++ Sbjct: 2 TVIIEAAPRSEEGKGASRRLRKQGLVPAVIYGGETEAQSVTFKNNELVKAVANVAFLTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-Q 123 + + + V+ K Q P + ++H D L+++E T+ +P+ F+N KS G+K Q Sbjct: 62 VEVSVDGAAQKVLVKSLQRHPSTGDVMHVDLLRIAEDKTIATRIPLEFVNAEKSEGVKAQ 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----QLN 178 GG+L+V + C ++P S+ VD D ++G H+ D +LPE ++ N Sbjct: 122 GGRLSVEAKLAEVRCLPKDLPASLIVDAIDGQLGQIFHLSDAQLPEGVELVALLKGGDHN 181 Query: 179 ITIATI 184 IA I Sbjct: 182 QPIARI 187 >gi|296392942|ref|YP_003657826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] gi|296180089|gb|ADG96995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Segniliparus rotundus DSM 44985] Length = 209 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 6/189 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + ++ A +RD+ GKG++R R++G +PA++YG+ DPK + AK+ ++ L N + Sbjct: 1 MAETARVEATVRDEFGKGASRRARRDGHVPAVLYGHGIDPKHFNIPAKEFARVLR-ANGV 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 I++L G E + K + P L H D + G + V VPV S + Sbjct: 60 NAIVSLHAGGEEHLALTKTVVVHPTKSYLQHVDLQVIRRGERIAVDVPVVLTGSAASGSV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +S+ A +IP+ I V + L+IG I ++ LPE S I Sbjct: 120 -----VQHETTTLSVEAEAMHIPEQIEVSIEGLEIGSKIIASELELPEAVSLTGDPEQMI 174 Query: 182 ATIVAPISG 190 I + Sbjct: 175 VQINEARAA 183 >gi|323359424|ref|YP_004225820.1| ribosomal protein L25 [Microbacterium testaceum StLB037] gi|323275795|dbj|BAJ75940.1| ribosomal protein L25 [Microbacterium testaceum StLB037] Length = 209 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ K+ A +R+ GKG AR LR G+IPA+IYG+ ++P+ +AL + + N Sbjct: 1 MS-EDNKVVAELRENFGKGFARRLRAAGKIPAVIYGHGTEPQHVALPGHQTALLIRRAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + V+ KD Q DPV I+ H D + V +G V V VPV + E S Sbjct: 59 --ALLDLDIAGKSQLVLVKDVQKDPVRQIIEHIDLIVVKKGEKVQVDVPVVVVGEPFS-- 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + VSL A +IP ++ VD+ + G I D++LP S +++ Sbjct: 115 ---GTIAMLDATTVSLEVEATHIPQNVEVDVEGAEDGTQITAADLKLPAGASLVTEPETL 171 Query: 181 IATIVAP 187 I + P Sbjct: 172 IVGVSVP 178 >gi|325962653|ref|YP_004240559.1| 50S ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] gi|323468740|gb|ADX72425.1| LSU ribosomal protein L25P [Arthrobacter phenanthrenivorans Sphe3] Length = 206 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG AR R IPA+IYG+ +DP + L AK + + + N Sbjct: 1 MSEQKLAAEVRTEFGKGYARRARMANLIPAVIYGHGADPIHVTLPAKATTLAVRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+LDI E + KD Q DP+ I+ H D L V +G VTV VPV ++ +PG Sbjct: 58 ALLSLDINGEGHLALVKDVQRDPIKQIIEHIDLLTVRQGEKVTVDVPVH-VSGETAPGTV 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +L VV E A ++P+S+ V + G+ IH D+ LP+ + ++ + Sbjct: 117 HNLELTVVSLE----AEATHLPESVEVSIEGRAAGEHIHASDLVLPKGSVLLTDAEALVI 172 Query: 183 TIV 185 I Sbjct: 173 NIS 175 >gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54] Length = 204 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G ++R LR+ G++PAI+YG + P I L +I L + F +IL Sbjct: 1 MKFTATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60 Query: 66 TLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G + V+ + Q ++H DF +V + VP+ F+N SP +K Sbjct: 61 QMQLEGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLS 120 Query: 125 -GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 ++ V E+ + C + +P I V+L D+ G SIH+ DI+LP + + Sbjct: 121 GAIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIKLPMGVTYV 171 >gi|189184105|ref|YP_001937890.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia tsutsugamushi str. Ikeda] gi|226736344|sp|B3CTF9|RL25_ORITI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189180876|dbj|BAG40656.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 2/186 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L +R G SAR LR+ G++P +IY P + K+++K F Sbjct: 1 MNEMLTLVGQLRSDFGTSSARALRRQGKVPGVIYKKGITPIHVCTLEKEVAKLYRKPFFS 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG-STVTVHVPVRFINENKSPG 120 +T++ L + + V+PK QL PV++ + H DF+ V + V VP+ F ++KS G Sbjct: 61 STVIQLQVDDQRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQKVKVPISFEGKDKSLG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNI 179 IK+GG LN+V V LLCP + IP I D+ ++ +G SI + + LPE + + + + Sbjct: 121 IKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPEGCNLVKRTTDY 180 Query: 180 TIATIV 185 IA+++ Sbjct: 181 VIASVI 186 >gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797] Length = 208 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 5/180 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 K+SA R+K+G +R +R+ G+IPA++YG+ DP +++ D+ + ++ + Sbjct: 9 KISATKREKLGSIESRHIRRAGRIPAVVYGHGQDPAHVSVDEHDLQDLVKNRE---RVFE 65 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ ++ + +D Q D ++H D ++++ VT+ VPVR SPG GG Sbjct: 66 IDVDGKVEETMLRDLQWDTFGTQILHVDLIRINASERVTLEVPVRL--RGTSPGATDGGI 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L H + L C A++IPD I+V +N L+IGD+IH+ DI +P + + + ++A Sbjct: 124 LEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDIEVPRGCKIHNDPELVVVHVLA 183 >gi|150020070|ref|YP_001305424.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho melanesiensis BI429] gi|166223727|sp|A6LJD8|RL25_THEM4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149792591|gb|ABR30039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosipho melanesiensis BI429] Length = 216 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 10/194 (5%) Query: 3 QKECKLSAVMRDKVGKG-SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + KL A+ R+ VGK + R LRK G IP ++YG +P I++ ++ K LY Sbjct: 1 MAQHKLEALTRNVVGKKRAVRRLRKQGLIPGVVYGPDIEPLSISIKKSNLIKLLYEVT-E 59 Query: 62 TTILTLDIGKEL------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 +I++L + E V K+ Q D ++D + H DF +G T+ +++P+ FI Sbjct: 60 ASIISLSVKDETGNEVFSHDVFIKNIQYDKLTDEVKHIDFYAPEKGHTMNINIPLEFI-- 117 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 K G+++GG + ++ HE+ + + I + + +D+++L +G+S H+ D++LP ++ Sbjct: 118 GKPKGVEKGGIVEIIHHELPVETLPSVIVEKLEIDISNLDLGESFHVSDLKLPTGMTAEL 177 Query: 176 QLNITIATIVAPIS 189 N + TI P Sbjct: 178 PENEPLVTIAIPRG 191 >gi|296118204|ref|ZP_06836785.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] gi|295968762|gb|EFG82006.1| ribosomal protein L25, Ctc-form [Corynebacterium ammoniagenes DSM 20306] Length = 215 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R + GKG+AR LR+ GQ+P +IYG+ ++P A ++ + + Sbjct: 1 MAQRPI-IKAQARTEFGKGAARRLRRAGQVPGVIYGSNTEPIHFAADILELHSLIRNY-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L L+I + + K + ++ + H D L + G V V VP+ + +PG Sbjct: 59 ANAVLELEIDGDQHLTMVKAIDQNVLTLDMDHLDLLSIKRGEKVEVEVPLTLVG-EPAPG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +V+ E +L NIP+ I V + L+ G + ++ LPE T+ ++ Sbjct: 118 LMFISDTDVLLVESDVL----NIPEEIEVSIEGLEDGTVVTAGEVNLPEGTTLIADPESP 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 IVSISEP 180 >gi|302342165|ref|YP_003806694.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] gi|301638778|gb|ADK84100.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfarculus baarsii DSM 2075] Length = 202 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ L+A R+ GKG+AR +R G+IPA++Y + + + A+++ + L + Sbjct: 1 MKQIPLAAARRETTGKGAARQMRAAGKIPAVVYSAGKPAENLMVEAREVDRLLRQSGGGS 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L+L + + + ++ Q D + +IH DF Q+ ++V P+ + E K G Sbjct: 61 AFLSLSVADEPARLAMLQEMQFDYLGKKVIHIDFHQIKADEEISVEAPIELVGEAK--GA 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG +N + V L +IPD++ VD++ L +GD+IH D+ LP+ + +S+ ++ + Sbjct: 119 AEGGLINQNLYSVLLRGRIADIPDAVVVDISGLDLGDNIHSTDLTLPQNVAMVSEESVLV 178 Query: 182 ATIVAPISG 190 VAP +G Sbjct: 179 VACVAPNTG 187 >gi|261417545|ref|YP_003251227.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. Y412MC61] gi|297528420|ref|YP_003669695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|319765202|ref|YP_004130703.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] gi|261374002|gb|ACX76745.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC61] gi|297251672|gb|ADI25118.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. C56-T3] gi|317110068|gb|ADU92560.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y412MC52] Length = 210 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +R G IPAI+YG + K I +SA ++ K L + T++L Sbjct: 3 IVLEAKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVSAAELEKVLR-EGGRTSLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL +G E V+ ++ Q DP+ L+HADF V + V + V VR + ++PG+K GG Sbjct: 62 TLKVGGEDYSVLLREMQRDPLRGELLHADFQAVDLSTEVDIDVEVRLV--GEAPGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|309812815|ref|ZP_07706553.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] gi|308433232|gb|EFP57126.1| ribosomal protein L25, Ctc-form [Dermacoccus sp. Ellin185] Length = 283 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A +R + GKG+AR +R+N IPA++YG+ P + L D + + N Sbjct: 56 MAADQIVLEAQLRTEFGKGAARRIRRNDMIPAVLYGHGETPVHLELPGHDTMMAVKNPN- 114 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LT+ + + +D Q + + + H D + V +G V V VPV E + Sbjct: 115 --ALLTIRFDGKEELALARDVQREVIRRFIEHVDLVIVKKGEKVEVDVPVHAEGEAAAET 172 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +++L PA +IP++ TV + + G I +D+ LP +S + Sbjct: 173 V-----VTTENGMLTVLTPATDIPEAFTVSVEGAEAGTQILAKDVTLPSGVELVSDEEML 227 Query: 181 IATIV 185 + + Sbjct: 228 VINVT 232 >gi|308235427|ref|ZP_07666164.1| 50S ribosomal protein L25/general stress protein Ctc [Gardnerella vaginalis ATCC 14018] gi|311114835|ref|YP_003986056.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] gi|310946329|gb|ADP39033.1| 50S ribosomal protein L25 [Gardnerella vaginalis ATCC 14019] Length = 205 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 9/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R++ GKG AR LR IPA IY ++P + L ++ + L N Sbjct: 1 MATK-ITLEGEVRNEFGKGVARRLRVANLIPASIYAGGAEPVHVTLPMRETTLSLRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGNESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 V-----AFVDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPEGVVLDMDGEES 171 Query: 181 IATIVAP 187 + ++ P Sbjct: 172 VVSVTVP 178 >gi|86130926|ref|ZP_01049525.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] gi|85818337|gb|EAQ39497.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134] Length = 208 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG PI SA +++ + Sbjct: 1 MKSVSIQGSKRESVGKKATKALRNAGLVPCVVYGGDE---PIHFSAPELAFKNLVYTPDA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ V I +D Q PV+D ++H DF Q+ EG VT+++PV F +K G++ Sbjct: 58 HTVEIELDGVTVQAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFTGNSK--GVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + ++PD + D+ +LKIG+ +++ ++ E + M N + Sbjct: 116 NGGVLRKTNRVLRVKALPKDLPDFLEADITNLKIGNKLYIGELPQ-ENITIMHPDNTVVC 174 Query: 183 TIVAPISG 190 + + Sbjct: 175 QVRTSRTA 182 >gi|148245095|ref|YP_001219789.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] gi|166223730|sp|A5CVE7|RL25_VESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146326922|dbj|BAF62065.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA] Length = 225 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A+ R+ GKG+ R LR+N +IPAI+YG P I L +I+ L ++ T++ Sbjct: 2 NLTINALTRNYQGKGANRRLRRNNKIPAIVYGTGKPPSKITLDIFEITHLLKNEETYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + K VI K+ Q P + + H DFL+++ ++ +P++F E + ++ G Sbjct: 62 LNLIVNKNKEAVIIKNLQRHPAKNSITHIDFLRINLNQSIITSIPIQFNGEEDNKAMRLG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-------MSQL 177 LN + + C N+P SI VD++ L IG+ I++ DI +P+ + Sbjct: 122 AVLNQFMTAIEISCLPTNLPHSINVDISHLTIGEHINLTDINIPKGIVITALTHGDIETH 181 Query: 178 NITIATIVAPI 188 N +IA I P Sbjct: 182 NQSIAIIQEPR 192 >gi|183601573|ref|ZP_02962943.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219683892|ref|YP_002470275.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis AD011] gi|241190928|ref|YP_002968322.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196334|ref|YP_002969889.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219179|gb|EDT89820.1| 50S ribosomal protein L25 [Bifidobacterium animalis subsp. lactis HN019] gi|219621542|gb|ACL29699.1| ribosomal protein L25, Ctc-form [Bifidobacterium animalis subsp. lactis AD011] gi|240249320|gb|ACS46260.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250888|gb|ACS47827.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793917|gb|ADG33452.1| Ribosomal protein L25 [Bifidobacterium animalis subsp. lactis V9] Length = 208 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 9/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R +IPA IY P + L ++ S L N Sbjct: 1 MANNSIVLEGELRTEFGKGPARRMRVAKEIPATIYAGGDQPVYVKLPMRETSLALRHTN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 60 --ALFTIKFGADSKLAVVKDVQRNPVKRIIEHIDFYEVKAGEKIEVEVPVFVEGTPKGGA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 V E+ + +N+P+ I V + L+ GD+I D+ LPE ++ Sbjct: 118 -----IAVVDAQELKVRADVSNLPERIVVSVEGLQDGDNIFARDLELPEGVELDIADPEE 172 Query: 180 TIATIVAP 187 ++ TI P Sbjct: 173 SVVTIEIP 180 >gi|148273454|ref|YP_001223015.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831384|emb|CAN02342.1| 50S ribosomal protein L25 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 214 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N Sbjct: 1 MVDNNLSAELRTQFGKGAARKIRAIGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+TLDI V+ KD Q DPV I+ H D + V +G V V VP+ E+ Sbjct: 58 QIITLDIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRQGERVEVEVPIHVEGESYP---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G N+ +++ A +IP+ V + + G I + LP + ++ + Sbjct: 114 -GTIHNLEYTSITVDVEATHIPERFVVSIEGFEEGTQITAGQVDLPAGATLVTDPETLVL 172 Query: 183 TIVAP 187 I P Sbjct: 173 AISVP 177 >gi|163753734|ref|ZP_02160857.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] gi|161325948|gb|EDP97274.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1] Length = 199 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG +P + SK +Y+ N T Sbjct: 1 MKSITINGSQRESVGKVATKALRNAGKVPCVLYGGD-NPLHFSAEELSFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G + I +D Q PV+D ++H DF ++ + VT+ +PV+ + KSPG+ Sbjct: 60 VVIALEDGS-THNAILQDIQFHPVTDKILHIDFYRLFDDKEVTMDIPVKVV--GKSPGVM 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD I D+++LKIG+ +++ ++ E + N + Sbjct: 117 NGGVLRLNKRKLRVKAIPANLPDFIEADISELKIGNKLYVTALQ-NENYKLLHADNTVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB5] gi|123721572|sp|Q131L9|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5] Length = 234 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 113/184 (61%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+TT+ Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEDKELRLRILAGRFLTTVF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+K+GG Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA +IP I D++ L IG S+H+ DI LP S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|170782787|ref|YP_001711121.1| 50S ribosomal protein L25/general stress protein Ctc [Clavibacter michiganensis subsp. sepedonicus] gi|169157357|emb|CAQ02544.1| probable 50S ribosomal protein L25 [Clavibacter michiganensis subsp. sepedonicus] Length = 214 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LSA +R + GKG+AR +R G+IPA+IYG+ +DP+ + L ++ + N Sbjct: 1 MVDNNLSAELRTQFGKGAARKIRAVGKIPAVIYGHGTDPQHVTLPGHELMLIIRKAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+TLDI V+ KD Q DPV I+ H D + V G V V VP+ E+ Sbjct: 58 QIITLDIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRRGERVEVEVPIHVEGESYP---- 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G N+ +++ A +IP+ TV + + G I + + LP + ++ + Sbjct: 114 -GTIHNLENTSITVDVEATHIPERFTVSIEGFEEGTQITVGQVDLPAGANLVTDPETLVL 172 Query: 183 TIVAP 187 I P Sbjct: 173 AISVP 177 >gi|298345582|ref|YP_003718269.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] gi|298235643|gb|ADI66775.1| 50S ribosomal protein L25 [Mobiluncus curtisii ATCC 43063] Length = 208 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K+ V+ KD Q PV ++H D L V V V VP+ I E G Sbjct: 64 LKGLKDPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEP-----MSGLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|149921897|ref|ZP_01910341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] gi|149817250|gb|EDM76727.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis pacifica SIR-1] Length = 201 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 9/194 (4%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + E KL+A +R GKG +R LR G IPA++YG + +S +++ + + + Sbjct: 1 MTETEFGKLNASVRSNTGKGVSRKLRAQGLIPAVMYGKGEGNVMLTVSPRELRRAMDPQR 60 Query: 60 FMTTILTLDIGKE-----LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 + T TL I E + DYQ DP+ D +H DFL+V S + +PV +I Sbjct: 61 KLNTFFTLTIQDEGGASSQEQCVVTDYQADPIRDEFLHIDFLRVDPNSEIVTKIPVEYI- 119 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 ++ G+ GGKL + +P +TVD++ L G ++ M+D+ L E + Sbjct: 120 -GRAVGVVAGGKLRTYQRTTRVAAKPAEVPVKLTVDVSPLDAGSTLRMKDLNL-ENARLL 177 Query: 175 SQLNITIATIVAPI 188 ++ +A + P Sbjct: 178 DHPDVVVAHVDPPR 191 >gi|206901159|ref|YP_002250500.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] gi|226736310|sp|B5YD92|RL25_DICT6 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206740262|gb|ACI19320.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12] Length = 207 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 8/193 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISK-----RLY 56 + ++ RDK+GK A+ R++ IP ++YG ++ + + + KD+ Sbjct: 1 MEITEIKLKKRDKIGKQYAKKYRRSNLIPGVVYGAHLKENIHVLVEKKDLWNLIKKGHSK 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ + I+ + I +D Q+DP+ D L+H DF VS V V+ V + Sbjct: 61 EQHILRLIIEDGENTITENAILQDIQIDPIKDDLLHVDFHAVSLEEVVDVY--VPVVLVG 118 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 +S G+KQGG L E+ + ++P I VD+ DL+IGDSI + D+ LPE ++ Sbjct: 119 ESKGVKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGDSITVGDLNLPENIKVLTP 178 Query: 177 LNITIATIVAPIS 189 + I I+ P Sbjct: 179 ADEVIVNIIPPKG 191 >gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A] Length = 233 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 119/188 (63%), Gaps = 1/188 (0%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+ Sbjct: 1 MATVRELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEGAELRQRILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI +++ + VIP+D+ LDPV D IH DF+++ EG+ + V VP+R + + +PG+ Sbjct: 61 TTIFDINLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG +N+V H + + C A NIP I D+ L+I S+H+ D+ LP ++++ ++T+ Sbjct: 121 KRGGTVNLVTHAIDIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTLAREDVTL 180 Query: 182 ATIVAPIS 189 TIV P Sbjct: 181 VTIVPPSG 188 >gi|171060169|ref|YP_001792518.1| 50S ribosomal protein L25/general stress protein Ctc [Leptothrix cholodnii SP-6] gi|226736334|sp|B1Y3Q0|RL25_LEPCP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170777614|gb|ACB35753.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Leptothrix cholodnii SP-6] Length = 208 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R+ G G++R LR G++P I+YG P I L + L + F ++IL Sbjct: 1 MKFVAFARELQGTGASRRLRHGGKVPGIVYGGSGKPTSIELDHNALYHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG- 124 +++ + V+ + Q+ +++H DF +V E + + VP+ F+NE +S +K Sbjct: 61 EMELAGQSEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLHFVNEAESQAVKLDK 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 +N V E+ + C A +P+ +TVDL L G S+H++D++L ++ N +A Sbjct: 121 CLINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEASIKVVTHGRKNPVVA 180 Query: 183 TIVA 186 T+V Sbjct: 181 TVVP 184 >gi|95930456|ref|ZP_01313192.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] gi|95133496|gb|EAT15159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfuromonas acetoxidans DSM 684] Length = 207 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L+ +R++VGKG AR R+NG +P ++YG +P + + K + + + + Sbjct: 1 MAQAELNVALRERVGKGGARSARRNGLVPGVVYGPGIEPCTVNVEPKALQEAISGEAGWN 60 Query: 63 TILTLDIGKELVHV--IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+LTL V + KD Q+D + H DF + ++ VPV + KS G Sbjct: 61 TLLTLKGDGPFDGVLAVVKDIQVDAIRRDATHVDFQAIDSNKMLSFMVPVNAV--GKSAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GG L V+ E+ ++C N+P I +D+ L+IGD +H++D+ PE +N T Sbjct: 119 EKAGGNLQVIRKELEVVCLPANVPGHIDIDVEALEIGDVVHIDDVTAPEGVELPHDVNFT 178 Query: 181 IATIV 185 + T+V Sbjct: 179 VITVV 183 >gi|269792684|ref|YP_003317588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100319|gb|ACZ19306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 213 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 2/187 (1%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNF 60 KE ++ R+ +GKG+ R LR G +PA++YG KP ++ +++ K + + Sbjct: 1 MKERVQVQFKSREGLGKGACRKLRSEGMVPAVVYGPGYQSGKPGFVNEREVYKVCGTDTW 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT++ L++ + ++ Q P++ ++H DFLQ+ + V V VPV +N+ G Sbjct: 61 ETTVIELNVDGNPEMALIREIQRHPLTRDIVHLDFLQMKKDHKVRVQVPVHLMNKGICVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +KQGG L HE+++ +IP+ + +D+ L++G + + D+ L ++ + Sbjct: 121 VKQGGVLEQHHHEITVEVFPEDIPERVDIDVKGLELGAEVRISDLNLGDRIHWALPTDTV 180 Query: 181 IATIVAP 187 I + +P Sbjct: 181 IVAVRSP 187 >gi|315656085|ref|ZP_07908976.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493087|gb|EFU82687.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 208 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L + V+ KD Q PV ++H D L V V V VP+ I E G Sbjct: 64 LKGLENPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEP-----MSGLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|315656038|ref|ZP_07908936.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] gi|315490102|gb|EFU79729.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus curtisii ATCC 51333] Length = 208 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K V+ KD Q PV ++H D L V V V VP+ I E G Sbjct: 64 LKGLKNPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEP-----MSGLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|304391137|ref|ZP_07373089.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326020|gb|EFL93266.1| 50S ribosomal protein L25 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 208 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 7/181 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R GKG AR R +IPA++YG+ +DP + L D + +++ Sbjct: 6 TLQVEPRTDFGKGFARRARVADKIPAVLYGHGTDPVHLLLPYHDTFLLVKDN--PNAVIS 63 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L K V+ KD Q PV ++H D L V V V VP+ I E G Sbjct: 64 LKGLKNPAMVLVKDIQRHPVKRQIMHMDLLLVKADEKVDVEVPIEIIGEP-----MSGLV 118 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + + P +IP+ I V+++ L+ G + + DI+LP + + + ++ A Sbjct: 119 ANQDLLNMEIFAPVIDIPEKIEVNVDGLEDGVVLSVADIKLPAGVEAKTDPEAIVLSVAA 178 Query: 187 P 187 P Sbjct: 179 P 179 >gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11] Length = 189 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P I++G +P PI + ++ KRL + F +T+ L + G E V VI +D Q D V Sbjct: 1 MVPGIVFGGDKEPLPIQIPFNELFKRLKAGRFKSTLWNLKVDGHEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ + + + +PV FINE +PGIK+GG L VV EV LLC A +IP+ I Sbjct: 61 DLPTHLDLMRLRRTTKIALFIPVEFINEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVDL L+I D + + + LP+ T + IA I AP Sbjct: 121 TVDLAGLEINDVVTISSVDLPDGTKPTIDRDFVIANISAPTG 162 >gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris CGA009] gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris TIE-1] gi|68053168|sp|Q6N1P8|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; AltName: Full=RRP-L25 gi|226736356|sp|B3Q7X4|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009] gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodopseudomonas palustris TIE-1] Length = 230 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 76/188 (40%), Positives = 113/188 (60%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R K GKG+AR R+ G++P +IYG+ P PI++ K++ R+ + F+ Sbjct: 1 MTSVLELKATARPKSGKGAARAERRAGRVPGVIYGDNQSPLPISVEEKELRLRILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ + + + VIP+DY LDPV D IH DFL++ G+T+ V VP+ +PG+ Sbjct: 61 TTVFDVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V H V L PA NIP I D++ L IG S+H+ DI LP S+S+ ++T+ Sbjct: 121 KRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDDVTL 180 Query: 182 ATIVAPIS 189 TIV P Sbjct: 181 VTIVPPSG 188 >gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.] Length = 211 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 5/184 (2%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A +R+ G G AR+LR+ G+IPA+IYG D ++++ KD+ L IL ++ Sbjct: 2 KAKLRESAGNGPARVLRRMGEIPAVIYGPGKDTNLLSITIKDLEDILKKAKVGQAILNIE 61 Query: 69 IGK---ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 I + K+ Q+ PVS L+H DF ++S + V +PV K GI GG Sbjct: 62 IQNGALHTRTAMIKELQIHPVSRELLHVDFYEISMDRKIKVKIPVVTKGIAK--GIDFGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L ++ E+ +LC IP+SI +D+ DL IGDSIH+ D+ LP+ +N TI T++ Sbjct: 120 MLQIIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDLVLPQGVEIPDDVNYTIVTVL 179 Query: 186 APIS 189 S Sbjct: 180 TTKS 183 >gi|295132327|ref|YP_003583003.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] gi|294980342|gb|ADF50807.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia profunda SM-A87] Length = 213 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 4/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR GQ+P ++YG ++P +Y+ + T Sbjct: 1 MKSITIKGSKRESVGKKATKALRNAGQVPCVLYGGDAEPLHFTTEEISFQHLVYTPDVHT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L G+ + I +D Q PV+D ++H DF ++ + +T+ +P+ + + G+K Sbjct: 61 VVIELKSGE-KYNAILQDIQFHPVTDNILHVDFYEIFDNKPITMEIPIHTV--GVARGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + +PD I D+ LKIG +++ + E N I Sbjct: 118 NGGVLRYNLRRLKVRGLPGVLPDYIEADVTKLKIGQKLYVTAVE-SEDYKIQHPDNTVIC 176 Query: 183 TI 184 + Sbjct: 177 QV 178 >gi|302530284|ref|ZP_07282626.1| ribosomal protein L25 [Streptomyces sp. AA4] gi|302439179|gb|EFL10995.1| ribosomal protein L25 [Streptomyces sp. AA4] Length = 205 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 7/187 (3%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 E +LS R + GKG+AR R+ G+IPA++YG+ SDP+ AL A + ++ + +N Sbjct: 8 SEVRLSVEPRTEFGKGAARRTRRAGKIPAVLYGHGSDPRHFALPAIEFARVVR-ENGTNA 66 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 ++TLD+ + K + P+ + + H D L V G VTV VPV + Sbjct: 67 VITLDLEGSSELALTKTIVVHPLKNYIEHVDLLVVKRGEKVTVDVPVVVTGTAAPSTLVA 126 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 + + A +IP+ V + ++ G I I LP ++ + Sbjct: 127 QDID-----TIQVEVEALHIPEQFEVSVEGIEAGTQITAGQISLPAGAELVTDPEALVVA 181 Query: 184 IV-APIS 189 + AP Sbjct: 182 VNEAPRG 188 >gi|295110890|emb|CBL27640.1| ribosomal protein L25, Ctc-form [Synergistetes bacterium SGP1] Length = 216 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI- 69 R++ GKG+ LR+ G P I YG + K + K + L++ Sbjct: 2 EPREETGKGANGRLRRKGYTPCIFYGPQME-KSVQGKLKTRDVERILATGRWESMRLNVT 60 Query: 70 --GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I ++ Q++P++D +H DFL++ +G +TV++P+ + +PG+K GG L Sbjct: 61 LPDGTEEMCIIREVQVNPLTDCPLHVDFLRLIKGRKITVNIPIEVLGRESAPGVKDGGVL 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + EV + NIPD +TVD++ L+IGD+IH+ D+ LPE + + +A +V Sbjct: 121 ETLR-EVEVETLPMNIPDVLTVDVSALQIGDAIHVRDLALPEGVELKADPDEIVAVVVMS 179 Query: 188 IS 189 Sbjct: 180 RG 181 >gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter winogradskyi Nb-255] gi|109893373|sp|Q3SPM6|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255] Length = 228 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 120/184 (65%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K GKG+AR R+ G++PA+IYGN P+PI++ ++ +R+ + F+TTI Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEEPELRQRILAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ + VIP+D+ LDPV D IH DF+++ EG+T+ V VP+R + + +PG+K+GG Sbjct: 65 DINLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +N+V H + + C A +IP I D+ L+I S+H+ D++LP +++ ++T+ TIV Sbjct: 125 TVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPLAREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisB18] gi|109893388|sp|Q219F9|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18] Length = 240 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 1/188 (0%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R GKG+AR R+ G++P +IYG+ P I++ ++ R+ + F+ Sbjct: 1 MATVKELKATARPAGGKGAARAERRAGRVPGVIYGDNKPPVTISVDDTELRARILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TTI +++ + VIP+D+ LDPV D IH DFL++ EG+ + V VP+ N +PG+ Sbjct: 61 TTIFDVELDGQKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHLKNAEGAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG +N+V H V L A +IP I D++ L IG S+H+ D+ LP+ ++S+ ++T+ Sbjct: 121 KRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVKTLSREDLTL 180 Query: 182 ATIVAPIS 189 TIV P Sbjct: 181 VTIVPPSG 188 >gi|114767366|ref|ZP_01446171.1| ribosomal protein L25 [Pelagibaca bermudensis HTCC2601] gi|114540537|gb|EAU43613.1| ribosomal protein L25 [Roseovarius sp. HTCC2601] Length = 178 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P I++G ++P I L ++ KRL + F +T+ L + G + V VI +D Q D V Sbjct: 1 MVPGIVFGGDAEPLAIQLPFNELLKRLKAGRFKSTLFNLKVDGHDDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S + + + V FINE +PG+K+GG L +V EV L A +IPD I Sbjct: 61 DLPTHFDLMRLRRTSRINLFIHVDFINEETAPGLKKGGVLTIVRQEVELEVLAGDIPDHI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVDL D +IGD IH+ D+ LP+ + IA I AP Sbjct: 121 TVDLADKQIGDVIHISDVTLPDGAKPTIDRDFVIANISAPRG 162 >gi|218441640|ref|YP_002379969.1| 50S ribosomal protein L25/general stress protein Ctc [Cyanothece sp. PCC 7424] gi|226736304|sp|B7KCY0|RL25_CYAP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218174368|gb|ACK73101.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7424] Length = 198 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 7/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + K LR+ G IPA +YG+ ++ + + KD L + T Sbjct: 2 QVTIECQKRPEGSK--PNTLRRQGLIPAALYGHKGTESISLIIKEKDAQLLLKKASVNNT 59 Query: 64 ILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ ++I + ++ Q P + H F V+ + V VP+ + +S G+ Sbjct: 60 LVDVNIPDVPWSGKALIREVQTHPWKRFVYHLSFFSVAAHGKIDVVVPLNLV--GESSGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + V E+S+ C +IP++I +D++ LKIGDSI + D++L E + + TI Sbjct: 118 KQGGIIEQVITEISVQCLPESIPETIEIDISPLKIGDSISVGDLQLSEGVTYLDDPTQTI 177 Query: 182 ATIVAPISGS 191 T++AP GS Sbjct: 178 LTVMAPKKGS 187 >gi|296140892|ref|YP_003648135.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] gi|296029026|gb|ADG79796.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Tsukamurella paurometabola DSM 20162] Length = 202 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL+A +R + GKG+AR R++G +P ++YG+ ++P+ + + A+D + L Sbjct: 1 MS-DTNKLTASVRTEFGKGAARRTRRDGLVPVVLYGHGTEPQHLTVVARDFATILRKD-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L+LDI + + K + P+ + + H D L + +G VTV VPV + Sbjct: 59 TNAVLSLDIDGKEQLALTKQVVVHPLRNYIEHTDLLVIKKGEKVTVSVPVIVEGDPAG-- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G ++ +EV + A +IP++I V++++L++G I + +P + ++ Sbjct: 117 ---GTQVAQDLNEVEIEADALSIPENIVVNVHNLEVGTQIAAGQLEVPAGVTVLTDPEAL 173 Query: 181 IATIV 185 I I Sbjct: 174 IVNIT 178 >gi|94264423|ref|ZP_01288213.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93455180|gb|EAT05398.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + Sbjct: 1 MLQVDITANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRN 60 Query: 63 TILTLDIGKEL----VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L++ HVI ++ Q DPV D ++HADF +S ++T VP+R+ K+ Sbjct: 61 AVINLEVNDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRYK--GKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP + Sbjct: 119 RGVELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALPAGVELADKPE 178 Query: 179 ITIATIV 185 ++ Sbjct: 179 GVCVAVL 185 >gi|328948675|ref|YP_004366012.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] gi|328448999|gb|AEB14715.1| 50S ribosomal protein L25 [Treponema succinifaciens DSM 2489] Length = 184 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 3/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ ++A R + GK A+ +R G+IPA+ Y + + + A + SK S T Sbjct: 1 MEQFVINATTRTESGKKYAKKIRAQGKIPAVAYNEKGESFMLEIDANEFSKAWRSIT-KT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ L I KD + D +D +HADF VS T + + G+ Sbjct: 60 TLIVLKIDGVENKAFIKDTEYDIKTDKSLHADFHIVSGQKKFTF--VYKIRYSGTAAGVL 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + E+ + ++P+ I+ D++ L+IG + D L +K +S + Sbjct: 118 KGGFMVKHVPEIKVKALPQDLPEFISADVSKLEIGQKFTIADFNLGDKIEVLSDPAALVV 177 Query: 183 TIVAPI 188 +I P Sbjct: 178 SIAPPK 183 >gi|78224043|ref|YP_385790.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter metallireducens GS-15] gi|109893365|sp|Q39RQ9|RL25_GEOMG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78195298|gb|ABB33065.1| LSU ribosomal protein L25P [Geobacter metallireducens GS-15] Length = 195 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ +S R+K GKG +R LR G++P ++YG +P +++ AK+++ + + Sbjct: 1 MQQKTISIEQREKAGKGVSRKLRAVGRVPGVVYGKGIEPVAVSVDAKELAAAIVGEGGRN 60 Query: 63 TILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L G L VI D Q P+ I DF +++ V VHVPV I + G Sbjct: 61 NLISLQGGGSLNGNTVIVADLQKAPLKGTFISVDFHKINMDEKVRVHVPVALI--GTALG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K+GG L +V H + L C + IP+ + VD+ +L IG +IH+ ++ L ++ T Sbjct: 119 AKEGGMLELVMHSLDLECLPSQIPEHVEVDVTNLAIGHAIHVGELVLAAGVKALDDPKAT 178 Query: 181 IATIV 185 I ++ Sbjct: 179 IVSVH 183 >gi|332527357|ref|ZP_08403413.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] gi|332111766|gb|EGJ11746.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax benzoatilyticus JA2] Length = 214 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 4/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A R G G++R LR ++P I+YG +PK I L + L + F ++IL Sbjct: 1 MKFTAYERSVQGTGASRRLRNAAKVPGIVYGAG-EPKMIELDHNALFFALKKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D+Q+ I++H DF +V E + + VP+ F E SP +K Sbjct: 60 EMELAGKVEKVLLRDFQMHAWKPIVMHVDFQRVDETTRLRKKVPLHFEGEENSPAVKTDK 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ--LNITIA 182 ++ V E+ + C A+ +P+ +T+DL+ L S+H+ D++LP ++ LN I Sbjct: 120 CLVSHVATEIEIECLASQLPEFVTIDLSGLVKNQSLHLNDLKLPAGIKAVRHGTLNPAIV 179 Query: 183 TIVAPIS 189 + P + Sbjct: 180 AVTMPKA 186 >gi|229494937|ref|ZP_04388688.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] gi|229318161|gb|EEN84031.1| ribosomal protein L25, Ctc-form [Rhodococcus erythropolis SK121] Length = 202 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D + L + Sbjct: 1 MS-EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFAAILR-AHG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + K + P+ + + HAD L + +G VT+ V V + + Sbjct: 59 TNAILTLDIEGTEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTIDVNVIVVGDAA--- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +S+ A +IP+ I V + L+IG I + LP+ ++ + + Sbjct: 116 --AGTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPKGSTLQADADTL 173 Query: 181 IATIVA 186 I +VA Sbjct: 174 IVNVVA 179 >gi|297568582|ref|YP_003689926.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] gi|296924497|gb|ADH85307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfurivibrio alkaliphilus AHT2] Length = 189 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + A RD+ GKG+AR LR+ G+ PA++YG +P+ ++L +K L+S + Sbjct: 1 MLQVDVKAAKRDQRGKGAARSLRRAGRTPAVLYGPQMEPQALSLDTHTFTKALFSVHRRN 60 Query: 63 TILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +++ L++ G+++ HV+ ++ Q DP+ D ++HADF +S + VP+R+ K+ Sbjct: 61 SVINLEVSDDGGEKIHHVVTREIQTDPILDQVLHADFYVISLDEPLVFQVPLRY--RGKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GG L H+VSL A +IPD I VD++ L + ++ LP + + Sbjct: 119 KGVDMGGDLVTSLHKVSLKGKALDIPDDIEVDVSGLGPNSELTCGELSLPAGVELVQGKD 178 Query: 179 ITIATIV 185 + Sbjct: 179 EVCVAVA 185 >gi|331694719|ref|YP_004330958.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] gi|326949408|gb|AEA23105.1| 50S ribosomal protein L25 [Pseudonocardia dioxanivorans CB1190] Length = 216 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 6/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ A R + GKG+AR R+ G+IPA++YG+ +DP+ ++L + + ++ + + Sbjct: 1 MAQARIDAETRTEFGKGAARRTRRAGKIPAVLYGHGTDPQHLSLPSLEFARVVREQ-GRN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L ++IG + K + P+ + H D L + G V V V V E Sbjct: 60 AVLEINIGGTPQLALTKTVVVHPIRPYIEHVDLLVIKRGEKVVVDVQVVVTGEAA----- 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + + + + +IP+SI + + D++IG I + LP+ + + + Sbjct: 115 AGSMIAQELNTIEVEADVLSIPESIELSVQDVEIGTQILAGSVALPDGVTLQTDPEALVV 174 Query: 183 TIVA 186 +VA Sbjct: 175 NVVA 178 >gi|182414101|ref|YP_001819167.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] gi|177841315|gb|ACB75567.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutus terrae PB90-1] Length = 272 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 98/191 (51%), Gaps = 4/191 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L+ R + G+ ++R LRK ++PAI+YG + P+ +++ A + ++ L + Sbjct: 1 MS-QTFQLNVASRAQTGRSASRRLRKTNRVPAILYGKHTSPESLSVDAPEFTRLLKTIGA 59 Query: 61 MTTILTLD--IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 T ++ L + ++ Q DP++D +H DF +V +HV VR + E+ Sbjct: 60 RTVLVELQQAGKTDKALSFLQEVQRDPMTDKFVHIDFQEVKADEKFEIHVTVRPVGESFG 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 Q G L + HE+ + C ++P+++ VD+ +LK+G++I + ++ + Sbjct: 120 V-KNQSGVLELNVHELRIRCLPKDLPEAVEVDVTELKVGETIKLGQLKPIAGVEFLDSKG 178 Query: 179 ITIATIVAPIS 189 + + V P++ Sbjct: 179 QPVVSCVEPVA 189 >gi|54026868|ref|YP_121110.1| 50S ribosomal protein L25/general stress protein Ctc [Nocardia farcinica IFM 10152] gi|68053081|sp|Q5YPZ5|RL25_NOCFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54018376|dbj|BAD59746.1| putative ribosomal protein L25 [Nocardia farcinica IFM 10152] Length = 200 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R + GKG+AR R+ G +PA++YG+ S+P+ ++L+A+ + L ++ Sbjct: 1 MSDANL-LEASVRTEFGKGAARRTRRAGNVPAVLYGHQSEPQHLSLNAQAFAAILR-EHG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + + K + P+ + HAD L V G VT V V + Sbjct: 59 TNAVLNLDIEGKKQLALTKSVVVHPIRRYIEHADLLIVKRGEKVTADVAVTVTGDAAPGT 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +S+ A N+P++I V + D +IG I I LP+ + S + Sbjct: 119 L-----VTQEATTISIEAEALNLPEAIEVSVEDAEIGTQITAGSIALPQGVTLASDPELL 173 Query: 181 IATIV 185 + ++ Sbjct: 174 VVNVI 178 >gi|284051744|ref|ZP_06381954.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira platensis str. Paraca] gi|291572085|dbj|BAI94357.1| 50S ribosomal protein L25 [Arthrospira platensis NIES-39] Length = 201 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R K R LR+ G IPA++YG+ ++ + + + AK + T Sbjct: 2 EITVKCQKRPSGSK--PRALRREGLIPAVLYGHKGAESEELTIDAKTAENLMKKGAVNHT 59 Query: 64 ILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q P H F + +V V +P+ FI E Sbjct: 60 LIQLNIPDLSWAGKALLREVQTHPWKGFPYHLSFFSIGTLESVEVTIPLNFIGEPMGV-K 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG L++V EV + C NIP++I V+++ L++GD++H+ +++LPE +++ + + Sbjct: 119 NSGGMLDLVITEVQVNCKPGNIPEAIDVEVSALEVGDALHIHELKLPEGVEVIAEADQVV 178 Query: 182 ATIVAPISG 190 A+I+ G Sbjct: 179 ASILYRGGG 187 >gi|325000632|ref|ZP_08121744.1| 50S ribosomal protein L25 [Pseudonocardia sp. P1] Length = 231 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ A R + GKG+AR R+ G+IPA++YG+ +DP ++L + + + + + Sbjct: 1 MAQTRIPAENRTEFGKGAARRTRRAGKIPAVLYGHGTDPVHLSLPSLEFAAVVRDQGRNA 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + G + + K + P+ + H D L + G V V + V + + Sbjct: 61 VLELDVDGSKPQLALTKTVVVHPLRPYIEHVDLLVIKRGEKVEVELDVVVTGDAAPGSL- 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + V + A NIP++I V + + +IG + +D+RLP + + Sbjct: 120 ----VTQDLNTVLVEADALNIPENIEVSVEEAEIGTQYYAKDLRLPNGVELRTDEEYLVV 175 Query: 183 TIVA 186 +V Sbjct: 176 QVVP 179 >gi|256833157|ref|YP_003161884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] gi|256686688|gb|ACV09581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Jonesia denitrificans DSM 20603] Length = 193 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 7/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL A R GKG+AR LR++G +PA+IY + S + I L ++ + N + Sbjct: 1 MSDVKLVASARTSFGKGAARQLRRDGHVPAVIYSHGSAAEHIYLDGHEVFLTVK--NHRS 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++L +D+ E+ VI KD Q DP+ ++ H DFL V +G TV VPV + E + Sbjct: 59 SLLNIDLDGEVKTVIIKDVQRDPIGRVVEHIDFLAVKKGEKSTVEVPVVLVGEAAAGAQ- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + ++ + +P+++ V ++ L+ G ++++D+ LP+ +++ + +A Sbjct: 118 ----ATLELMKATVEADVSVLPENVEVSVDGLEAGTVLYVKDVTLPDGQVFINEDDQVVA 173 Query: 183 TI 184 + Sbjct: 174 VV 175 >gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris BisA53] gi|122297068|sp|Q07RP7|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53] Length = 234 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 74/189 (39%), Positives = 115/189 (60%), Gaps = 2/189 (1%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R VGKG+AR R+ G++PA+IYG+ P I+L +++ R+ + F+ Sbjct: 1 MATVKELKATARPSVGKGAARAERRAGRVPAVIYGDNKPPVTISLEDRELRLRILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT++ LD+ VIP+D+ LDPV D +H DFL++ EG+T+ V VP+ N +PG+ Sbjct: 61 TTVVDLDLDGTKHRVIPRDFHLDPVRDFPVHVDFLRLGEGATIRVSVPLHLKNSETAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL-NIT 180 K+GG +N+V H V L A++IP I D+ L IG S+H+ D+ LP+ ++ ++T Sbjct: 121 KRGGTVNIVTHTVDLEAEADSIPQFIEADIGTLDIGTSLHLSDVVLPKGVKLVAAREDVT 180 Query: 181 IATIVAPIS 189 + TIV P Sbjct: 181 LVTIVPPSG 189 >gi|89100524|ref|ZP_01173385.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] gi|89084790|gb|EAR63930.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911] Length = 211 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R + + LR G IP ++YGN + K I L+ D K + + Sbjct: 1 MSTV-LQAKERKEFRNSNLTQLRNEGNIPGVVYGNKIESKAIYLNGPDFIKTIR-ETGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +LD+ V+ DYQ DP+ + + H DF V +T V + + + G+K Sbjct: 59 AVFSLDVEGTKHDVVLSDYQADPLKNEITHLDFRAVDMSQEITAEVRIELV--GDAAGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L HE+S+ N+IP S+ V++ DL++G+SI DI+ + + IA Sbjct: 117 DGGVLQQPVHELSVSAKPNDIPQSVEVNIADLQVGESITAADIKAGRGFTINTDDETVIA 176 Query: 183 TIVAPI 188 +I+AP Sbjct: 177 SILAPR 182 >gi|307151053|ref|YP_003886437.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] gi|306981281|gb|ADN13162.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece sp. PCC 7822] Length = 191 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 7/189 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + K LR+ G IPA +YG+ ++ + + KD L + T Sbjct: 2 QVTIECQKRPEGSK--PNALRRQGLIPAALYGHKGTESISLTVKEKDAQVLLKKASVNNT 59 Query: 64 ILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ ++I + ++ Q+ P + H F V+ + V VP+ + ++ G+ Sbjct: 60 LVDVNIPDVPWSGKALIREVQIHPWKRSVYHLSFFSVAAHGKIEVVVPLHLV--GEAAGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + V +++ C +IP++I +DL L IGDS+ + D++LPE + + + I Sbjct: 118 KQGGLIEQVISSIAVDCLPESIPEAIDIDLGPLGIGDSVSIGDLKLPEGVTCLDDPSQLI 177 Query: 182 ATIVAPISG 190 +++AP G Sbjct: 178 LSVIAPRKG 186 >gi|322420138|ref|YP_004199361.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Geobacter sp. M18] gi|320126525|gb|ADW14085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M18] Length = 195 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+ +R + GKG R LR G++PA++YG +P I+L K++S+ + + Sbjct: 1 MSKQVLNVEIRKETGKGICRRLRAAGRVPAVVYGKGMEPVSISLVQKELSEAIAGEGGRN 60 Query: 63 TILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTL EL +VI D D + + H D +++ V VHV + + G Sbjct: 61 HILTLKGAGELEGANVIVADLLRDSLKNQPRHVDLHKINLADKVKVHVKLNLVGTPA--G 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L+ HEV + C +IP I V++ +L IG S+H+ DI P T+ +S Sbjct: 119 VKAGGFLDFAMHEVEVECLPVHIPAHINVEVAELTIGHSVHVSDIVAPVGTTIVSDPKAP 178 Query: 181 IATIV 185 + +I+ Sbjct: 179 VVSIL 183 >gi|225012236|ref|ZP_03702673.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] gi|225003791|gb|EEG41764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-2A] Length = 216 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG +P + D SK +Y+ N T Sbjct: 1 MKSITINGSKRESVGKVATKALRNAGRVPCVLYGGG-EPLHFSAPELDFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD I +D Q P++D ++H DF ++ + V++++PV+ + + Sbjct: 60 VVINLDGENV--AAILQDIQFHPLTDKILHIDFYRLFDDKEVSMNIPVK-VEGAAPGVLN 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + ++PD I +++ LK+G+ ++ +++ E+ + + N + Sbjct: 117 SGGVLVLNKRKLRVKALPKDLPDFIVANISKLKLGNKLYTAELQT-EEYTLLHPDNTVVC 175 Query: 183 TIVAPIS 189 + + Sbjct: 176 QVRTSRA 182 >gi|325110027|ref|YP_004271095.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] gi|324970295|gb|ADY61073.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305] Length = 211 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 6/190 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + KL A R++VG + + LR G+ P +YG+ + A+ + Sbjct: 1 MSN-DPKLVAAERNEVGTNATKRLRNEGRTPGTLYGHNEGTRHFAV---EAEALQPIIAS 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L+IG + +D Q D S ++H D L+V V V + +PG Sbjct: 57 GHKVVDLEIGGATEKTMIQDVQWDTFSQYVLHFDLLRV--NEKERVTTDVELVTRGIAPG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L +V H + + CP +P+ +T+ +N L+IGDSI + D+ LP ++ Sbjct: 115 VLAGGILELVHHSLPIECPVIRLPEQVTLRINKLQIGDSITVGDLELPTDVTTSLPPEEV 174 Query: 181 IATIVAPISG 190 + IVAP + Sbjct: 175 LVHIVAPKAA 184 >gi|308171943|ref|YP_003918648.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|307604807|emb|CBI41178.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens DSM 7] gi|328551753|gb|AEB22245.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens TA208] gi|328910013|gb|AEB61609.1| 50S ribosomal protein L25 General stress protein CTC [Bacillus amyloliquefaciens LL3] Length = 202 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + R +R +G +P IIYG + P++L + ++ K L + TI+T Sbjct: 3 TLKANERTDFKRSTLRKIRHSGHVPGIIYGKETTNTPVSLDSVELLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+ + Q DP+ + L HADF V+ + VP++ E K G+K GG Sbjct: 62 IDVNGNQQSVMVTELQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGEAK--GVKDGGI 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 120 IQQPLHELSIKAKPKDIPQTIDVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASILP 179 Query: 187 PI 188 P Sbjct: 180 PK 181 >gi|254445745|ref|ZP_05059221.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] gi|198260053|gb|EDY84361.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235] Length = 210 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 2/185 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 ++A RD+ G S+ LR G++PA++YG P+ ++L A+++ L + Sbjct: 26 TMNTLTINASNRDQAGSASSGRLRAEGRVPAVVYGKSKAPQNLSLDARELRILLRTIGNN 85 Query: 62 TTILTLD-IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ++ L E I K+ Q P+ D H DF +V + + +PV I E Sbjct: 86 TPVVQLKADDGEPRTSIIKEVQRHPIKDSYTHVDFQEVGADELIVLEIPVHPIGEADGV- 144 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + G + V H VS+ C NIP SI D++ LK+GDS H+ + + + Sbjct: 145 KNESGTIETVSHTVSVRCLPKNIPASIDADVSALKVGDSFHVSQLPEMDGIEYLDAPEQP 204 Query: 181 IATIV 185 + +V Sbjct: 205 VFAVV 209 >gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodopseudomonas palustris HaA2] gi|109893387|sp|Q2ISF7|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2] Length = 240 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 114/184 (61%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K GKG+AR R+ G++P +IYG+ P PI++ KD+ R+ + F+TTI Sbjct: 5 MEFKATARPKSGKGAARAERRAGRVPGVIYGDNKPPLPISVEDKDLRLRIQAGRFLTTIF 64 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + VIP+DY LDPV D +H DFL++ EG+T+ + VP+ +PG+K+GG Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHLKGLESAPGVKRGG 124 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 N+V H V L PA+ IP I D++ L IG S+H+ DI LP+ S+S+ ++T+ TIV Sbjct: 125 TFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVKSVSREDVTLVTIV 184 Query: 186 APIS 189 P Sbjct: 185 PPSG 188 >gi|312880020|ref|ZP_07739820.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] gi|310783311|gb|EFQ23709.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260] Length = 217 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 2/180 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 R++ G G R LR G IPA++YG + K + K++ + S ++ TTIL LD+G Sbjct: 12 REETGTGVCRKLRVEGLIPAVLYGPAFPEGKKGVVGYKEVLPVVSSSHWETTILELDLGD 71 Query: 72 -ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + ++ Q ++ +H DFLQ+ + + V VPV N + G+K GG L Sbjct: 72 GRQEMALMREIQRHALTRSPLHIDFLQLVKDHKIRVKVPVHLDNRDTCAGVKLGGLLEQF 131 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 +E+ + +IP+ I +++ L + I + D+ LP+ + + + + ++V P Sbjct: 132 LYELEVEVLPQDIPEQIRLNVQGLGMNKEIKVSDVPLPQGATWVQDPDSVVVSLVPPKGA 191 >gi|307566372|ref|ZP_07628811.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] gi|307344949|gb|EFN90347.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A] Length = 196 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYSKN 59 KE KLS R+ +GK ++RL+RK G +P +YG + P ++ S+ R Sbjct: 1 MKEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGLPVAVSFSSPMSELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L I E + KD Q P +D L+H DF +V+E + + VPV+ + Sbjct: 61 PNIYGVELTIDGEKHLAVMKDLQFHPTTDALLHVDFYEVTEEKPIVMGVPVKL--SGLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG+LN+ ++++ P N +P+++ +D+ +L++G +I + D+ E ++ + Sbjct: 119 GVRDGGRLNMSIRKINVKAPFNKMPETLNIDVTNLQLGKAIKVGDLSF-EGLELVTSKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|206890546|ref|YP_002249253.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] gi|226736374|sp|B5YG55|RL25_THEYD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|206742484|gb|ACI21541.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii DSM 11347] Length = 214 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 2/179 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R++ GKG AR LR G IP +IY P+ + K++ + Sbjct: 1 MEKFILNVEKRERTGKGIARQLRSKGIIPCVIY-KNGQSTPVQIPTKELYTFMNIATREK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL + + I +DYQ+DPV+ L+H DF++VS + V +PV I E Sbjct: 60 LFVTLKLDGQEKQAILQDYQVDPVTGKLLHVDFMEVSATEKIRVTIPVVLIGEPIGVKQD 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L E+ + IP I VD++ L++GD++H+ DI+ E +S I Sbjct: 120 KG-VLQHGISEIEIEAIPEKIPGHIEVDVSHLEVGDAVHVSDIKFEEGIKVISNPEEVI 177 >gi|260591411|ref|ZP_05856869.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] gi|260536603|gb|EEX19220.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319] Length = 200 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE K++ R +GK +++ LRK G +P +YG P ++ +A R Sbjct: 1 MKEIKVAGQKRTDLGKKASKQLRKEGLVPCNLYGEAQKDGKPLALSFTASMAELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 61 PHIYVVELVIDGERHTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ +L +G SI + + E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTNLHLGKSIKVGQLSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|325270437|ref|ZP_08137041.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] gi|324987233|gb|EGC19212.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608] Length = 202 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE K+S R +GK +++LLRK G +P +YG P ++ +A R Sbjct: 1 MKEIKVSGQKRTDLGKKASKLLRKEGLVPCNLYGEAHKDGKPVAVSFAAPMAELRKVVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q PV+D L+H DF +V++ +T+ VPV+ + Sbjct: 61 PHIYVIELVIDGESHTAVLKELQFHPVTDALLHIDFYEVNDQKPITIGVPVKL--SGLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ L++G SI + ++ E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTGLQLGKSIKVGELSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp. 1NLS2] Length = 242 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 117/188 (62%), Gaps = 1/188 (0%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+ Sbjct: 1 MATVKELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQNIFAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +D+ + VIP+DY LDPV D +H DFL++ +G+T+ V VP+ SPG+ Sbjct: 61 TTLFNIDLDGQKHRVIPRDYSLDPVKDFPLHVDFLRLGKGATIRVSVPLHVKGAEVSPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG +N+V H V L IP I VD++ L+I +S+H+ D++LP+ +S+ ++T+ Sbjct: 121 KRGGTVNMVNHTVELEADVEQIPQFIEVDVSKLEINNSLHLSDVQLPKGVKPVSRDDVTL 180 Query: 182 ATIVAPIS 189 T+V P Sbjct: 181 VTVVPPSG 188 >gi|120405737|ref|YP_955566.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium vanbaalenii PYR-1] gi|119958555|gb|ABM15560.1| LSU ribosomal protein L25P [Mycobacterium vanbaalenii PYR-1] Length = 218 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 7/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A +R GKG++R R+ G++P ++YG+ ++P+ + L+ +D + L +LT Sbjct: 8 NLPAQVRTATGKGASRRARREGKVPVVLYGHGTEPQHLELNGRDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V G VTV V + + + Sbjct: 67 LDIDGTEQLALTKAIEVHPIRRNIQHADLLVVRRGEKVTVEVNIVIEGDATPGTL----- 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + V + +IP+ V + + G I I LP + +S + IV Sbjct: 122 VAQDANAVEIEADVQSIPEQFVVSVEGAEEGTQILAGQIELPSGVTLISDPETLVVNIVA 181 Query: 186 APISG 190 AP + Sbjct: 182 APTAA 186 >gi|118473057|ref|YP_889670.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium smegmatis str. MC2 155] gi|118174344|gb|ABK75240.1| ribosomal protein L25, Ctc-form [Mycobacterium smegmatis str. MC2 155] Length = 215 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 7/183 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R++G++PA++YG+ +DP+ + L+A+D + L + ILT Sbjct: 10 KLTANVRTRTGKGASRQARRDGKVPAVLYGHGTDPQHLELNARDFAAVLR-SHGTNAILT 68 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K + P+ + HAD L V G VTV V V + + Sbjct: 69 LDIEGTEQLALTKALDVHPIRRNIQHADLLVVQRGEKVTVEVTVLVEGDATPGTL----- 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + ++ G I I LPE + +S + + +V Sbjct: 124 VTQDANTIEIEAEALSIPEQLTVSVEGVEAGTQITAGQISLPEGVNLISDPELLVVNVVE 183 Query: 186 API 188 AP Sbjct: 184 APS 186 >gi|319953434|ref|YP_004164701.1| lsu ribosomal protein l25p [Cellulophaga algicola DSM 14237] gi|319422094|gb|ADV49203.1| LSU ribosomal protein L25P [Cellulophaga algicola DSM 14237] Length = 207 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 5/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK + + LR G++P ++YG P + +Y+ N T Sbjct: 1 MKSITISGSKRESVGKKATKALRNAGKVPCVLYG-GETPLHFSADEPAFKTLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ G + +D Q PV+D ++H DF Q+ VT+ +PV+ SPG+ Sbjct: 60 AVIEIEGGD-KFDAVLQDIQFHPVTDAILHIDFYQLFADKEVTMDIPVQLK--GNSPGVM 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ +PD +D++ LKIG++I +E + L ++ + + N + Sbjct: 117 NGGRLLFRKRKLTIKALPAKLPDFFDIDISKLKIGNNITVETL-LKDEFTILHPENTVVV 175 Query: 183 TIVAPI 188 + + Sbjct: 176 QVKSAR 181 >gi|154684571|ref|YP_001419732.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus amyloliquefaciens FZB42] gi|166223662|sp|A7Z0H5|RL25_BACA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154350422|gb|ABS72501.1| Ctc [Bacillus amyloliquefaciens FZB42] Length = 202 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + R +R +G +P IIYG P++L + ++ K L + TI+T Sbjct: 3 TLKANERTDFKRSTLRKIRHSGHVPGIIYGKEITNTPVSLDSVELLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +D+ V+ D Q DP+ + L HADF V+ + VP++ E K G+K GG Sbjct: 62 IDVNGNQQSVMVTDLQTDPLKNELTHADFQVVNMSEELEAEVPIQLTGEAK--GVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + HE+S+ +IP +I VD++ L++ D + + D+ + + +A+I+ Sbjct: 120 IQQPLHELSIKAKPKDIPQTINVDISGLEMNDVLTIADLTADGNYTFTNDPEEVVASILP 179 Query: 187 PI 188 P Sbjct: 180 PK 181 >gi|302345747|ref|YP_003814100.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] gi|302149597|gb|ADK95859.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC 25845] Length = 201 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE K++ R +GK +++ LRK G IP +YG P + +A R Sbjct: 1 MKEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 61 PHIYVVELIIDGERRTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|308070285|ref|YP_003871890.1| 50S ribosomal protein L25 [Paenibacillus polymyxa E681] gi|305859564|gb|ADM71352.1| Probable 50S ribosomal protein L25 [Paenibacillus polymyxa E681] Length = 213 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L+A R + + R LR G+IPA++YG+ + P+ + AK+ +K + + Sbjct: 7 SIQLTAQPRTEKKGSAIRELRLKGRIPAVVYGSELEGTPVHVDAKEFNKVVRTGRSEVFN 66 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT++ G+ + VI KDYQ + +HADFL++S+ + V V + + + G K G Sbjct: 67 LTVEGGE-TIPVIIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKTG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V EV + ++P +I VD++ L +GD + D++LP+ + +A+I Sbjct: 122 GILQVQETEVEVEGLPADLPSTIEVDVSALDVGDKLSASDLKLPKGVTLHVPEEELLASI 181 Query: 185 VAPIS 189 + P + Sbjct: 182 IVPRA 186 >gi|288803707|ref|ZP_06409136.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] gi|288333796|gb|EFC72242.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18] Length = 201 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE K++ R +GK +++ LRK G IP +YG P + +A R Sbjct: 1 MKEIKVTGQKRTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFSFTAPMSELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q PV+D L+H DF +V++ + + VPV+ + + Sbjct: 61 PHIYVVELIIDGERRTAVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +++ +L++G SI + ++ E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|313885342|ref|ZP_07819093.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] gi|312619448|gb|EFR30886.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola ACS-139-V-Col8] Length = 205 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 5/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KLSA +R + G +++ R+ G IP +YG + + + ++A++ L + + Sbjct: 1 MKLSAELRTETGTAASKRARRQGLIPVTMYGKDFETQSLLINAREFEAILRKE-GSNAVF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+ + V KD+Q + D +S + V +P+ + E + G Sbjct: 60 ELETDGKTQTVWVKDFQKAALKSEFYSVDLEAISANQKLEVEIPLVLVGEESV----KVG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + + PA+NIP S +D+ ++IGD+ + D+ +P + + + + TI ++ Sbjct: 116 IVETVINSILAEAPASNIPQSFELDVTGMEIGDTKAVSDLEVPSDVTVLLEADQTIVSVS 175 Query: 186 API 188 AP Sbjct: 176 APS 178 >gi|212716015|ref|ZP_03324143.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] gi|212661382|gb|EEB21957.1| hypothetical protein BIFCAT_00927 [Bifidobacterium catenulatum DSM 16992] Length = 198 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR +R IPA +Y +P + L K+ + L N Sbjct: 1 MAT-TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|94265983|ref|ZP_01289706.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] gi|93453449|gb|EAT03865.1| Ribosomal protein L25 [delta proteobacterium MLMS-1] Length = 189 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++A R GKG+AR LR+ G+ PA++YG +P+ ++L ++ L++ + Sbjct: 1 MLQVDIAANKRADFGKGAARSLRRAGRTPAVLYGPGIEPQTLSLETHAFTQALFAVHRRN 60 Query: 63 TILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L++ + HVI ++ Q DPV D ++HADF +S ++T VP+R+ K+ Sbjct: 61 AVINLEVKDGSDSRIHHVITREIQTDPVKDNVLHADFYLISLDESLTFRVPLRYK--GKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG+L++ +SL A +IPD I +D+ + ++ ++ LP + Sbjct: 119 RGVELGGELSITRRNISLKGKALDIPDHIEIDVAPMGSNSTLTCSEVALPPGVELADKPE 178 Query: 179 ITIATIV 185 ++ Sbjct: 179 GVCVAVL 185 >gi|213692446|ref|YP_002323032.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254801035|sp|B7GS74|RL25_BIFLI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|213523907|gb|ACJ52654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458591|dbj|BAJ69212.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 207 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL R + GKG AR LR +IPA IY +P + L ++ + L N Sbjct: 1 MAT-TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ + KD Q +PV I+ H DFL+V G + V VPV K Sbjct: 59 --ALFTIAFDGNTKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V + L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDIEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|56418580|ref|YP_145898.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus kaustophilus HTA426] gi|68053036|sp|Q5L3U8|RL25_GEOKA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56378422|dbj|BAD74330.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426] Length = 210 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + +R G IPAI+YG + K I +S ++ K L + T++L Sbjct: 3 IVLEAKERADKKRSTLHRIRSQGGIPAILYGKKVENKMIFVSTAELEKALR-EGGRTSLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL +G E V+ ++ Q DP+ L+HADF V + V + V VR + ++PG+K GG Sbjct: 62 TLKVGGEEHSVLLRELQRDPLRGHLLHADFQAVDMSTEVDIDVEVRLV--GEAPGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP I VD++ L++GD++ + D++ K + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVKTDGKFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|124514473|gb|EAY55986.1| ribosomal protein L25 [Leptospirillum rubarum] Length = 207 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 7/194 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 1 MQNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSRGK-ATSLSLNLAHVQKAFHSHAGSH 59 Query: 63 TILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I Sbjct: 60 AIFRLKVTGTSDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIG-ET 118 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K GG L E+++ C +PD + VD + L + +S H+ D+ + Sbjct: 119 PAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASSLAMNESFHVRDLPAMPGLRVLDSP 178 Query: 178 NITIATIVAPISGS 191 + + I+ P + + Sbjct: 179 DTVLVHILPPRTEA 192 >gi|225351971|ref|ZP_03742994.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157218|gb|EEG70557.1| hypothetical protein BIFPSEUDO_03576 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 198 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR +R IPA +Y +P + L K+ + L N Sbjct: 1 MAT-TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|294496923|ref|YP_003560623.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] gi|294346860|gb|ADE67189.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium QM B1551] Length = 209 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + R +R G PA++YGN ++ PI L++ D K + + + Sbjct: 2 SISIQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIR-EAGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL + K+ V+ D Q DP+ + ++HADF V + V + + E K G K+G Sbjct: 61 LTLQVDKQKYSVMLHDIQTDPLKNEIVHADFQVVDMKKEIDTEVSLSLVGEAK--GTKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L HE+SL +IP SI VD++ L I D+I + DI++ +K T+A++ Sbjct: 119 GVLQQSLHEISLKGLPQDIPSSIDVDVSGLGINDTITVADIKVDKKLEITHDAQDTVASV 178 Query: 185 VAP 187 + P Sbjct: 179 LPP 181 >gi|206602648|gb|EDZ39129.1| Ribosomal protein L25 [Leptospirillum sp. Group II '5-way CG'] Length = 207 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 7/194 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R GKG AR LR GQIPA++Y ++L+ + K +S Sbjct: 1 MQNVELDAEFRSSNGKGIARRLRMAGQIPAVLYSRGK-ATSLSLNLAHVQKAFHSHAGSH 59 Query: 63 TILTLDI-----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 I L + GK V + +D Q DP++ ++H DF ++SE V VPV I Sbjct: 60 AIFRLKVTGASDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIG-ET 118 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K GG L E+++ C +PD + VD + L + +S H+ D+ + Sbjct: 119 PAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASTLSMNESFHVRDLPAMPGLRVLDNP 178 Query: 178 NITIATIVAPISGS 191 + + I+ P + + Sbjct: 179 DTVLVHILPPRTEA 192 >gi|147676447|ref|YP_001210662.1| 50S ribosomal protein L25/general stress protein Ctc [Pelotomaculum thermopropionicum SI] gi|226736346|sp|A5D632|RL25_PELTS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146272544|dbj|BAF58293.1| ribosomal protein L25 [Pelotomaculum thermopropionicum SI] Length = 209 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 5/183 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM---TT 63 +L A R + + LR+ G IPA++YG IA+ A ++ K L Sbjct: 4 ELEAQARTEKTRSFTHSLREKGMIPAVVYGKNVGSLSIAVDAGELQKILEGAGSNALIRM 63 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + +V+ K+ Q DPV LIHADF QVS V VPV G + Sbjct: 64 KIKENGKIRKHNVLVKEVQRDPVRRELIHADFHQVSLKDRVHATVPVHLTGSAA--GTVE 121 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG L + V + C A+ IP++ITVD++ L+IGD+I + D+ LP ++ + T Sbjct: 122 GGVLTPLLRRVEMECLASEIPEAITVDVSGLRIGDTITVADLPLPPGVRALEDPEAPVVT 181 Query: 184 IVA 186 + A Sbjct: 182 VTA 184 >gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa] Length = 189 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 1/166 (0%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR +G+IPA+IYG D I+LS ++ + S T ++ L+I + +V+ +D Sbjct: 1 SRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLIELEIDNKKEYVLMRD 60 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q PV+D + H DF + G+ + + VP+ F NE K GIK+GG LN++ +S+ C Sbjct: 61 VQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSP 120 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS-SMSQLNITIATIV 185 I +I +DL+ L G SIH+ D++LP + + +M + N I TI Sbjct: 121 KAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTIS 166 >gi|296131718|ref|YP_003638965.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola sp. JR] gi|296030296|gb|ADG81064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola potens JR] Length = 217 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 5/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL R + LR +G+IPA+IYG K + + +++ L + Sbjct: 1 MVEVKLRVQPRPNKTRSYKHWLRNHGKIPAVIYGKDLPNKLVEVDVRNLESILRNGAGKN 60 Query: 63 TILTLDIGKELVH---VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+ L + + H V+ KD Q DPV L+H D ++S + VP+ ++ Sbjct: 61 AIINLTVEEAKPHKLTVMIKDLQRDPVKGDLMHVDLQKISLTDKIHTTVPIHLT--GEAE 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L E+ + C NIPD I+VD++ L IGDS+ + DI + + + Sbjct: 119 GIKKGGILQSGLRELEIECVPANIPDHISVDISGLDIGDSLTVADIAGQDGFTVKNDPAT 178 Query: 180 TIATIVAPI 188 I +IV+P Sbjct: 179 VIVSIVSPR 187 >gi|217076515|ref|YP_002334231.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] gi|226736370|sp|B7IFM6|RL25_THEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|217036368|gb|ACJ74890.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B] Length = 217 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 3 QKECKLSAVMRDKVGKG-SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-- 59 ++ L A++R VGK + R LR+ G +P ++YG +P I++ ++ K + Sbjct: 1 MEKHTLEALVRSVVGKKRAVRRLRRQGFVPGVVYGPDVEPLSISIKRSNLIKLFHEVTEA 60 Query: 60 -FMTTILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 ++ + + GKE V K+ Q D ++D + H DF +G + +++P+ F+ Sbjct: 61 SIISLTVKDENGKEVFSHDVFIKNVQYDKLTDEVKHVDFYAPEKGHKMKINLPLEFV--G 118 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 K+ G ++GG L + HE+ + N + + + +D+++L +G +++++D++LPE + Sbjct: 119 KAKGEEKGGVLEIHHHELPVETLPNAVVEKLEIDVSNLDLGQALYVKDLKLPEGMEAELD 178 Query: 177 LNITIATIVAPIS 189 IA + P Sbjct: 179 EEEIIAIVSTPSG 191 >gi|121603807|ref|YP_981136.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas naphthalenivorans CJ2] gi|166223703|sp|A1VKN7|RL25_POLNA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120592776|gb|ABM36215.1| LSU ribosomal protein L25P [Polaromonas naphthalenivorans CJ2] Length = 218 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 1/168 (0%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A R K G G++R LR G+ P I+YG ++P I + + + + F +IL Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTAEPILIEIDHNALWHAIKKEAFHGSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++G V+ +D Q+ P + H DF +V + +TV VPV F E +SP +K + Sbjct: 61 EMELGGTEHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVHFSGEEESPAVKTEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTS 172 + V E+++ C +IPD I VDL L G S+H++DI LP++ Sbjct: 121 CLVTHVLTEMTVSCFPADIPDFIAVDLGGLTKGKSLHVKDIVLPKRVK 168 >gi|196250765|ref|ZP_03149452.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] gi|196209715|gb|EDY04487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. G11MC16] Length = 210 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IPA++YG D K I++SA D+ K L + +++ Sbjct: 3 IVLGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ ++ Q DP+ L+HADF V + V V V VR + ++PG+K GG Sbjct: 62 TLKVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSTEVDVDVEVRLV--GEAPGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|23335022|ref|ZP_00120260.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Bifidobacterium longum DJO10A] gi|23465427|ref|NP_696030.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum NCC2705] gi|189439450|ref|YP_001954531.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium longum DJO10A] gi|239622048|ref|ZP_04665079.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132858|ref|YP_004000197.1| rply [Bifidobacterium longum subsp. longum BBMN68] gi|317483594|ref|ZP_07942574.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|322688989|ref|YP_004208723.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] gi|322690958|ref|YP_004220528.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|71153122|sp|Q8G5Z8|RL25_BIFLO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736281|sp|B3DSB4|RL25_BIFLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23326077|gb|AAN24666.1| probable 50S ribosomal protein L25 [Bifidobacterium longum NCC2705] gi|189427885|gb|ACD98033.1| Ribosomal protein L25 [Bifidobacterium longum DJO10A] gi|239515239|gb|EEQ55106.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516979|emb|CBK70595.1| LSU ribosomal protein L25P [Bifidobacterium longum subsp. longum F8] gi|311773827|gb|ADQ03315.1| RplY [Bifidobacterium longum subsp. longum BBMN68] gi|316914969|gb|EFV36411.1| ribosomal protein L25 [Bifidobacterium sp. 12_1_47BFAA] gi|320455814|dbj|BAJ66436.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. longum JCM 1217] gi|320460325|dbj|BAJ70945.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis 157F] Length = 206 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL R + GKG AR LR +IPA IY +P + L ++ + L N Sbjct: 1 MAT-TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ + KD Q +PV I+ H DFL+V G + V VPV K Sbjct: 59 --ALFTIAFDGNTKMAVVKDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V + L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|295702290|ref|YP_003595365.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] gi|294799949|gb|ADF37015.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus megaterium DSM 319] Length = 209 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R + R +R G PA++YGN ++ PI L++ D K + + + Sbjct: 2 SISIQANKRTDFKNSTNRKIRDEGNFPAVVYGNKTESTPIYLNSADFIKTIR-EAGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LTL + K+ V+ D Q DP+ + +IHADF V + + V + + E K G K+G Sbjct: 61 LTLQVDKQKYSVMLHDIQTDPLKNEIIHADFQVVDMKKEIDIEVSLSLVGEAK--GTKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L +E+SL +IP SI VD+++L I D+I + DI++ +K T+A++ Sbjct: 119 GVLQQSLYEISLKGLPQDIPSSIDVDVSELGINDTITVADIKVDKKLEITHNAEDTVASV 178 Query: 185 VAP 187 + P Sbjct: 179 LPP 181 >gi|332519193|ref|ZP_08395660.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] gi|332045041|gb|EGI81234.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lacinutrix algicola 5H-3-7-4] Length = 210 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK S + LR GQ+P ++YG + + SK +Y+ N T Sbjct: 1 MKSITINGSQRESVGKKSTKALRNAGQVPCVLYGGDK-AVHFSAAELAFSKLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G + I +D Q PV+D ++H DF QV E +T+ +PVR+I G++ Sbjct: 60 VVIELEGGD-TYNAILQDIQFHPVTDRILHIDFYQVFEDKEITMDIPVRYI--GNPRGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD I D+ +LKIG+ +++ + E + M N + Sbjct: 117 NGGVLRKNKRSLRVKALPGNLPDYIDADIENLKIGNKLYITKLE-SEDYTFMHPDNTVVC 175 Query: 183 TI 184 + Sbjct: 176 LV 177 >gi|297572063|ref|YP_003697837.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] gi|296932410|gb|ADH93218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcanobacterium haemolyticum DSM 20595] Length = 193 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 8/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A +R + GKG+AR LR+ ++P ++YG+ +P + L + Sbjct: 1 MNE-TLKADIRKEFGKGAARRLRREEKLPGVLYGHEEEPMHLELDYHTTFLAVRGNA--N 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L++++ E I KD Q +P+S ++ H D L+V +G V V VPV E Sbjct: 58 ALLSIEVEGEKHLAIVKDVQRNPLSRLIEHIDLLRVKKGEKVDVEVPVVVEGEPAGDA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 V +V PA IP++ITV++ L+ G + + D++LPE + Sbjct: 116 ---IATVELLQVMAKAPAIAIPEAITVNVEGLEEGTHVTVADLKLPEDVEVELDPETIVV 172 Query: 183 TIVAPI 188 I P Sbjct: 173 VIAVPS 178 >gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25/general stress protein Ctc [Bifidobacterium adolescentis ATCC 15703] gi|118765344|dbj|BAF39523.1| 50S ribosomal protein L25 [Bifidobacterium adolescentis ATCC 15703] Length = 204 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 10/189 (5%) Query: 1 MDQKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M L R + GKG+AR +R IPA +Y DP + L K+ + L N Sbjct: 1 MIMATTITLEGAARTEFGKGAARRMRVANLIPATVYAGGEDPTFVQLPMKETTLALRHTN 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 61 ---ALFTIKYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGA 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLN 178 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 118 AVAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPE 172 Query: 179 ITIATIVAP 187 ++ T+ P Sbjct: 173 ESVVTVEVP 181 >gi|258591287|emb|CBE67584.1| 50S ribosomal protein L25 (General stress protein CTC) [NC10 bacterium 'Dutch sediment'] Length = 220 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L +R +VGKG+A+ LR+ IPA++YG S P + ++ ++ K L S Sbjct: 1 MEELRLKGQVRTQVGKGAAKKLRRQRLIPAVVYGGTSGPTAVTINPFEMMKLLGSGAGEN 60 Query: 63 TILTLDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +++L + ++ VI K Q DPV +HADFL+VS + V +PVR + Sbjct: 61 VLISLAMDGENEQSRTVILKALQRDPVRGGPLHADFLEVSMQRKIKVQIPVRLVG-EAIG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 +GG L EVS+ C IP I VD++ L +G IH+ ++ + Sbjct: 120 VKLKGGLLEQHLREVSVECLPGAIPSHIQVDISHLDLGHGIHVRELTAGGDIKVLEDPAR 179 Query: 180 TIATIVAPI 188 + T++ Sbjct: 180 PVVTVLVQR 188 >gi|332666097|ref|YP_004448885.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] gi|332334911|gb|AEE52012.1| 50S ribosomal protein L25 [Haliscomenobacter hydrossis DSM 1100] Length = 199 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ R +GK ++ LR +G+IP ++YG D +++ D+ +Y+ +F Sbjct: 1 METIAITGQSRTGLGKKPSKDLRNDGRIPCVLYG-GQDVVHFSVTLNDVKNLIYTPDFRV 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LT+D I KDYQL P++ L H DFL + EG V + VPVR SPG+K Sbjct: 60 ANLTVDG--ATYRCIVKDYQLHPLTSQLTHIDFLSLVEGQKVKLEVPVRTK--GVSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + + + +D+ + +G S+ + DI +PE ++ +I + Sbjct: 116 LGGKLQIKLRRAKVKTLPEQMVTELYIDITSMDLGHSLRVRDIIVPEGIELLNAPSIPVV 175 Query: 183 TIVAPIS 189 TI P + Sbjct: 176 TIEIPRA 182 >gi|326332302|ref|ZP_08198582.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] gi|325950008|gb|EGD42068.1| ribosomal protein L25, Ctc-form [Nocardioidaceae bacterium Broad-1] Length = 208 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ A R + GKG+AR +R+ +IPA++YG+ +DP + L L + Sbjct: 1 MSSEKIVAEKRTEFGKGAARRIRRENKIPAVVYGHGADPIHLTLPGHATMMALKH-HGAN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L LDI + + K Q+D V ++ H DF+ V G VTV + V + + S Sbjct: 60 ALLELDIDGKKQLALTKQVQVDDVRRVIEHVDFVAVRAGEKVTVDIVVNVVGDAAS---- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + + +++ A ++P+S+ + + L+IG I + LP+ T+ ++ + Sbjct: 116 -GTMVVTDANTLTVEAEATHVPESLEISIEGLEIGTQILAGQVELPKGTTLVTDPETLVV 174 Query: 183 TIVAPI 188 I Sbjct: 175 NITEAR 180 >gi|282879284|ref|ZP_06288029.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] gi|281298566|gb|EFA90990.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310] Length = 217 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE +S R+ +GK +++ LRK G +P IYG P+ +A +A R Sbjct: 1 MKEINVSGKKREDLGKKASKQLRKEGYVPCNIYGAAQADGKPEALAFAAPMSELRKVVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + + Sbjct: 61 PHIYVINLNIDGESHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ +V++ P IP+ + +D+ +LKIG SI + + E + ++ Sbjct: 119 GVRDGGRMNLSIRKVNVTAPYQRIPEHLDIDVTNLKIGKSIKVGQLNF-EGLEMATSKDV 177 Query: 180 TIATIVAPISG 190 + +I + Sbjct: 178 VVCSIKMTRAA 188 >gi|269468550|gb|EEZ80199.1| ribosomal protein L25/general stress protein Ctc [uncultured SUP05 cluster bacterium] Length = 218 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 7/175 (4%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR LR+ ++PAI+YG DP I L+ +I+ L T++L L I K+ VI KD Sbjct: 3 ARRLRREEKVPAIVYGAGKDPSAITLNIHEITHLLEKDGAFTSVLDLAIDKKTESVIIKD 62 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 Q P + + H D L+++ T+T ++P+ FI E+ + ++ G LN + V + C Sbjct: 63 LQRHPAKNCITHVDLLRINMKQTITTNIPLNFIGEDDNEAMRLGAILNQFINTVEVSCLP 122 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-------MSQLNITIATIVAPI 188 ++P+ I VD++ L+IGD I + + LPE + + ++ + P Sbjct: 123 ADMPNGIDVDISGLEIGDHISLTGLSLPEGVILTALTHDDIEAHDQSVVAVQEPK 177 >gi|297243447|ref|ZP_06927379.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] gi|296888492|gb|EFH27232.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis AMD] Length = 208 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G+E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGEESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LP+ + Sbjct: 117 V-----AFVDVQELKVRADVANLPERLVVNVDGLTDGTKVFAKDVKLPQGVELDMDGEES 171 Query: 181 IATIV 185 + ++ Sbjct: 172 VVSVT 176 >gi|149203915|ref|ZP_01880883.1| ribosomal protein L25 [Roseovarius sp. TM1035] gi|149142357|gb|EDM30402.1| ribosomal protein L25 [Roseovarius sp. TM1035] Length = 208 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 3/192 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R GKG+AR R+ G +P +++G +P I + + KRL F Sbjct: 1 MAGEIPDLQAQERAGTGKGAARAARRAGMVPGVVFGGDKEPLAINIPFNALLKRLKKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ L + G + V VI +D Q D V D+ H D +++ + + + + V FIN + Sbjct: 61 KSTLFNLQVEGHDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINAEQCK 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTS-SMSQL 177 +++GG L VV EV L A +IPD +TVDL+ ++ IGD + + + LP + + Sbjct: 121 ALRKGGVLTVVRPEVELNVLAGDIPDHVTVDLSKVEKIGDVVTISMVDLPAGSEPVIKDR 180 Query: 178 NITIATIVAPIS 189 + I I AP + Sbjct: 181 DFVICNISAPSA 192 >gi|307823425|ref|ZP_07653654.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] gi|307735410|gb|EFO06258.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylobacter tundripaludum SV96] Length = 199 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A R + GK +AR R+ G +PA+IYG +P+ + L+ ++ K L + Sbjct: 1 MSN-VFEFVAESRGQSGKSAARRARRAGNVPAVIYGGHGEPQMLLLNHNEVIKHLAHEAV 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L ++I + V+ K Q P ++H DFL+V+ + VHVP+ F+NE S G Sbjct: 60 YSHVLGVNIDGKTERVVLKGVQRHPAKFQVLHMDFLRVTMSEALKVHVPLHFVNEQTSVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-----S 175 K+GG + +V + C +PD I VDL L IG+S H+ DI LP + S Sbjct: 120 GKKGGIVTHAMIDVEVSCLPAALPDYIEVDLGGLDIGESAHLSDIVLPAGVEIVALAQGS 179 Query: 176 QLNITIATIVAPIS 189 + + +A+++A + Sbjct: 180 EHDHPVASMMASKA 193 >gi|138893724|ref|YP_001124177.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus thermodenitrificans NG80-2] gi|166223684|sp|A4IJC8|RL25_GEOTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|134265237|gb|ABO65432.1| General stress protein [Geobacillus thermodenitrificans NG80-2] Length = 210 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IPA++YG D K I++SA D+ K L + +++ Sbjct: 3 IVLGAKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALR-EGGRHSLV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ ++ Q DP+ L+HADF V + V V V VR + ++PG+K GG Sbjct: 62 TLKVDGEDYSVLLREVQRDPLRGELLHADFQAVDMSAEVDVDVEVRLV--GEAPGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L HE+S+ NIP +I VD++ L++GD I + D++ + + IATI+ Sbjct: 120 VLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|225166107|ref|ZP_03727838.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] gi|224799649|gb|EEG18147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Opitutaceae bacterium TAV2] Length = 250 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 5/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+ R + G+ ++R +RK QIPAI+YG + P+ +A+ A + +K L + Sbjct: 1 MSTTQHILNVAPRAQTGRSASRRVRKANQIPAILYGKHTKPETLAVDAPEFAKLLKAVAG 60 Query: 61 MTTILTLDIG----KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + I+ L ++ Q DP++D +H D +V + ++VPV + E+ Sbjct: 61 RSLIIELHRKDKATDNKALSFLQEVQRDPITDRFLHVDLQEVKADEKMDINVPVSLVGES 120 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 Q G L++ H + + C ++P I VD+ +LK G+SI + I+ P Sbjct: 121 FGV-KNQNGVLDINAHTLRIRCLPKDLPPHIEVDVTELKAGESIKVGSIKAPAGVELRDL 179 Query: 177 LNITIATIV 185 I + Sbjct: 180 PGHPIVSCQ 188 >gi|281412600|ref|YP_003346679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] gi|281373703|gb|ADA67265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga naphthophila RKU-10] Length = 215 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK---NFMT 62 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 63 TILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ D G V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVV--GKPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|154487414|ref|ZP_02028821.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] gi|154083932|gb|EDN82977.1| hypothetical protein BIFADO_01266 [Bifidobacterium adolescentis L2-32] Length = 202 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR +R IPA +Y DP + L K+ + L N Sbjct: 1 MAT-TITLEGAARTEFGKGAARRMRVANLIPATVYAGGEDPVFVQLPMKETTLSLRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDIEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|184201366|ref|YP_001855573.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] gi|226736333|sp|B2GLJ3|RL25_KOCRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|183581596|dbj|BAG30067.1| 50S ribosomal protein L25 [Kocuria rhizophila DC2201] Length = 211 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 8/182 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R + GKG AR +R N +IPA+IYG+ ++P + L ++ + N +L Sbjct: 5 ITIPATLRTEFGKGYARRVRANDKIPAVIYGHGAEPLHVILPGHEMMLASRNSN---AVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ E + K+ Q V ++H D L V G V V +PV E + Sbjct: 62 DINVDGEGHLAMIKEVQRHAVRPEILHIDLLTVRRGERVEVEIPVHVEGE-----VAPTA 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 NV + + + A +P+ +TVD+ DL++G+ ++ +D+ LP + +S + + + Sbjct: 117 IHNVEENVLVVEADALKVPEYLTVDITDLEVGEHVYAKDVTLPGNVTLVSDPELLVVNVS 176 Query: 186 AP 187 P Sbjct: 177 EP 178 >gi|118603027|ref|YP_904242.1| 50S ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223716|sp|A1AXW4|RL25_RUTMC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|118567966|gb|ABL02771.1| LSU ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 222 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 7/191 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A+ RD GKG++ LR+N +IPAI+YG P+ I L +I++ L ++ T++ Sbjct: 2 SLTINALTRDDQGKGASHRLRRNHKIPAIVYGTGKAPRNITLDVFEITRLLENEESYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L L + K+ VI KD Q P +I+ H DFL+++ + VP+ F E + ++ G Sbjct: 62 LDLIVDKKKEAVIIKDLQRHPAKNIVTHVDFLRINLKQAIVTSVPLHFNGEENNEAMRLG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-------MSQL 177 LN V + C ++P +I VD+++L +G+ I + +P+ + Sbjct: 122 AILNQFVTSVEVSCLPTDLPHAIDVDISNLTMGEHISFTGLNIPKGVVITALTHGDIETH 181 Query: 178 NITIATIVAPI 188 N ++ I P Sbjct: 182 NRSVVAIQEPR 192 >gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter hamburgensis X14] gi|122417117|sp|Q1QIV7|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14] Length = 233 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 118/188 (62%), Gaps = 1/188 (0%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +L A R K GKG+AR R+ G++P +IYGN P+PI++ ++ +R+ + F+ Sbjct: 1 MATVRELKATARPKSGKGAARAERRAGRVPGVIYGNNQPPQPISVEEPELRQRILAGRFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ + + + VIP+D+ LDPV D IH DFL++ EG+T+ V +P+R + + +PG+ Sbjct: 61 TTVFDISLEGKKHRVIPRDFHLDPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG +N+V H + + C A++IP I D+ L++ S+H+ D+ LP +++ ++T+ Sbjct: 121 KRGGTVNLVIHAIDVECAADDIPQFIEADVGGLEMSHSLHLSDVELPPGVKPLAREDMTL 180 Query: 182 ATIVAPIS 189 TIV P Sbjct: 181 VTIVPPSG 188 >gi|261337364|ref|ZP_05965248.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] gi|270277743|gb|EFA23597.1| ribosomal protein L25, Ctc-form [Bifidobacterium gallicum DSM 20093] Length = 197 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L +R + GKG AR +R IPA +Y P + L K+ + L N Sbjct: 1 MATTTITLEGNLRTEFGKGPARRMRVAKLIPATVYAGGDQPVYLTLPMKETTLALRHNN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++TL + + KD Q +PV I+ H DF +V G + V VPV E K Sbjct: 60 --ALITLKYDGKSTMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIEVEVPVFVEGEPKGAA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 V + + N+P+ IT+D+ L G+ I + LPE ++ + Sbjct: 118 T-----AFVDVQMLKVRADVANLPERITIDVTGLSAGEHITAAGLELPEGIELDVTDPDE 172 Query: 180 TIATI 184 +I ++ Sbjct: 173 SIVSV 177 >gi|242280388|ref|YP_002992517.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] gi|242123282|gb|ACS80978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio salexigens DSM 2638] Length = 196 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K A +R K GK + R LR G +P + Y + ++++ + K Sbjct: 1 MSEK-VTFKAELRTKTGKSANRQLRNQGMVPVVFYSQDGENLVLSVNENEFVKMYRKV-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + +L++ + + Q+DPV H DFL VS+ T+ V VPV + E K+PG Sbjct: 59 TTRVFSLEVDGKTYDTLIWKVQMDPVRPRPNHIDFLGVSKDRTLKVDVPV--VTEGKAPG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG++ + ++++ C A +P I V+++ + +GD++ + +I L E S + N Sbjct: 117 VKLGGRMAIYRPKLTVACTAATLPAEIVVNIDSMNVGDTVFVNEIDLGEGASVVFDNNFA 176 Query: 181 IATIVAPIS 189 + A Sbjct: 177 LVRCAAGRG 185 >gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata obscuriglobus UQM 2246] Length = 216 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + G +A LRK G +PAI+YG+ +A++AK++ + + ++ Sbjct: 1 MS-ASVTLKTTARAETGSRAAARLRKQGLVPAIVYGHKQANVSLAVNAKELDQAIRVQHA 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI + V+ ++ Q D + +IH DF + V V VPV N K+ G Sbjct: 60 --RVLDLDIEGKTETVLIRELQWDYLGKEMIHVDFERKDRAELVRVSVPVALKNAPKATG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 GG L+ H + + CP IP+SI +D+ +L +G IH+ D+ LP + Sbjct: 118 ---GGVLDQPFHALHVECPLGAIPESIAIDITNLTLGHPIHIRDLALPPGVKVLDAPEGV 174 Query: 181 IATIVAP 187 + + P Sbjct: 175 VVQLKLP 181 >gi|86134892|ref|ZP_01053474.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] gi|85821755|gb|EAQ42902.1| 50S ribosomal protein L25 [Polaribacter sp. MED152] Length = 206 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG PI SA++ + + Sbjct: 1 MKSITIKGSKRESVGKAATKALRNAGMVPCVIYGGE---TPIHFSAEEKAFKNLVYTPNV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L++ E + I +D Q PVSD ++H DF Q+ + VT+++PV+ SPG+ Sbjct: 58 YTASLEVDGEKIPAILQDIQFHPVSDKILHVDFYQLFDDKEVTMNIPVQLT--GTSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD IT D++ LKIG + + + + + M N + Sbjct: 116 NGGSLRFTNRKLKVKAIPANLPDFITADISKLKIGHKLVITSL-FNDDYTFMHPDNTVVV 174 Query: 183 TIVAPISGS 191 + + + Sbjct: 175 QVRTSRNAA 183 >gi|310643470|ref|YP_003948228.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Paenibacillus polymyxa SC2] gi|309248420|gb|ADO57987.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus polymyxa SC2] Length = 213 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 5/185 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L+A R + + R LR G+IPA++YG+ + P+ + AK+ +K + + Sbjct: 7 SIQLTAQPRTEKKGSAIRGLRLKGRIPAVVYGSEIEGTPVHVDAKEFNKVVRTGRSEVFN 66 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT++ G+ + VI KDYQ + +HADFL++S+ + V V + + + G K G Sbjct: 67 LTVEGGE-TIPVIIKDYQQR--DNQWLHADFLKISKNKPLRVRVSIDY--QGTPVGTKTG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V EV + +++P +I VD++ L IGD + D++LP+ + +A++ Sbjct: 122 GILQVQETEVEVEGLPSDLPSTIEVDVSALDIGDKLSASDLKLPKGVTLHVSEEELLASV 181 Query: 185 VAPIS 189 + P + Sbjct: 182 IVPRA 186 >gi|289523178|ref|ZP_06440032.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503721|gb|EFD24885.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 219 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 2/186 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKN 59 M + R+ +GK ++ LRK G +PA+ YG + P+ +S +I ++S + Sbjct: 1 MAVGNIDIRLEYRENLGKNRSKRLRKEGYLPAVFYGPDYKEAVPVKVSVDEILPHIHSSH 60 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + T + + + + +DYQ DP+S ++H DF Q+ +G V V VP+ IN Sbjct: 61 WKTLMFNVIFPDGKKEMAMIRDYQRDPISRQVLHIDFYQLVKGHRVLVAVPIVLINRESC 120 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K+GG L HE+ + +PD I VD+ L +GDS+ + DI LPE L Sbjct: 121 LGVKKGGVLIQSLHELEMEVLPTEMPDEIHVDIAGLDVGDSLRISDINLPESALVSVDLE 180 Query: 179 ITIATI 184 T+ I Sbjct: 181 DTVVQI 186 >gi|91204543|emb|CAJ70771.1| similar to 50S ribosomal protein L25 (TL5) [Candidatus Kuenenia stuttgartiensis] Length = 212 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L A R + R LR G IPA++YG+ D +++ + N Sbjct: 1 MEVLELKAEKRTLKRTKAVRKLRATGHIPAVVYGHKEDNVLLSVDGGEFG---RVLNAGA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++L + V+ KD Q D +SD ++H DF +VS VT+ VP+ + G+K Sbjct: 58 RMISLAYDRTKESVLIKDVQYDNLSDKVLHVDFARVSMDERVTLKVPIIL--SGSAVGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + C +P+ I V++++L++G SIH++++ +S + Sbjct: 116 AGGVLTQTMKNIEIECFPAAVPEDIKVNVSELEMGKSIHVKELPSIAGIKYLSDAESVVV 175 Query: 183 TIV 185 ++ Sbjct: 176 SVH 178 >gi|296169883|ref|ZP_06851495.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895439|gb|EFG75141.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 222 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L +LT Sbjct: 8 QLTATVRTETGKGASRRARREGKIPAVLYGHGADPQHLELPGHDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V G V V V V + + Sbjct: 67 LDIDGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVVVEVRVVIEGDAVPGTL----- 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + A +IP+ +TV + D + G I LP+ + +S + + +V Sbjct: 122 VTQDTNTIEIEADALSIPEQLTVSIEDAEPGTQFTAGQITLPKGVNLISDPEMLVVNVVT 181 Query: 186 APIS 189 AP + Sbjct: 182 APTA 185 >gi|170289080|ref|YP_001739318.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] gi|226736373|sp|B1LBD7|RL25_THESQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170176583|gb|ACB09635.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga sp. RQ2] Length = 215 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK---NFMT 62 L A +R+ GK AR LR++G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRSGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 63 TILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ D G V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVV--GKPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|327542674|gb|EGF29145.1| Ribosomal protein L25 [Rhodopirellula baltica WH47] Length = 205 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 6/181 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + R+ G + R LR++G +PA++YG+ + +A+ + + L + + Sbjct: 5 IQVTKRESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQVKGLLRHHSKTVQL--- 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + D Q DP+ ++H D ++V+ V + VP+ ++ G+++GG L Sbjct: 62 -SGDVDETALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVL--HGEAVGVREGGML 118 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HEV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 119 LENVHEVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEAQ 178 Query: 188 I 188 Sbjct: 179 R 179 >gi|332982255|ref|YP_004463696.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] gi|332699933|gb|AEE96874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella australiensis 50-1 BON] Length = 201 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 94/189 (49%), Gaps = 3/189 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L+ R + G G+A LR++G IP ++YG P + + K++ + + SK+ Sbjct: 1 MAERVALAIEKRQETGSGAAARLRRSGMIPGVVYGKSIAPINVKVPVKELREII-SKHGR 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L+I + + + KD Q D + H DF + + VP+R E Sbjct: 60 NAVLNLNIEGQTLAAVIKDLQHDLMGTQYEHVDFQHILMNEVIKTKVPIRLQGEGLIES- 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG + + E+ + C +++P+ I +D++D+++G S+ + DI +PE +S + + Sbjct: 119 -KGGLVMLQLDELDVECLPDSLPEVIEIDVSDMEVGQSLKVADINVPENVRIISNPDEIV 177 Query: 182 ATIVAPISG 190 ++ SG Sbjct: 178 LAVMETKSG 186 >gi|294790835|ref|ZP_06755993.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] gi|294458732|gb|EFG27085.1| ribosomal protein L25, Ctc-form [Scardovia inopinata F0304] Length = 201 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 9/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R++ GKG+AR +R G IPA IY ++P + L K+ + + N Sbjct: 1 MADITLEGEARNEFGKGAARRMRLAGFIPATIYEGGNEPAFVKLPQKEATLAMRHAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ + GKE + ++ Q +PV + H DF +V G V V VPV + K + Sbjct: 58 ALIEIKYGKESKLAVAREIQRNPVKRTIEHIDFYEVHAGEKVEVEVPVFIEGDPKGAAV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 V +++ +N+P++IT+ + L GD + +D++LPE + +I Sbjct: 117 ----AFVDVQNLTVRADVSNLPENITISVEGLVEGDHVFAKDVKLPENAELVIDDPEESI 172 Query: 182 ATI 184 ++ Sbjct: 173 VSV 175 >gi|148270294|ref|YP_001244754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga petrophila RKU-1] gi|166223728|sp|A5ILV5|RL25_THEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|147735838|gb|ABQ47178.1| LSU ribosomal protein L25P [Thermotoga petrophila RKU-1] Length = 214 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK---NFMT 62 L A +R+ GK AR LR+NG++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRNGEVPAVVYGPATEPIPVKIKRSVLEKVFHTISEATPIQ 61 Query: 63 TILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ D G V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVSEKTVFLKMIQRDKVSETVVHLDFYEPTKGHRMRINVPLKVV--GKPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + +N+P I VD++ L +GD I+ D++LPE + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDNVPQEIEVDVSSLDLGDVIYARDLKLPEGVKCLLGDEEV 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|283783322|ref|YP_003374076.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] gi|283442055|gb|ADB14521.1| ribosomal protein L25, Ctc-form [Gardnerella vaginalis 409-05] Length = 207 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAKLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ GKE + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 V-----AFVDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPEGVELDMDGEES 171 Query: 181 IATIV 185 + ++ Sbjct: 172 VVSVT 176 >gi|283458589|ref|YP_003363222.1| 50S ribosomal protein L25 [Rothia mucilaginosa DY-18] gi|283134637|dbj|BAI65402.1| ribosomal protein L25 [Rothia mucilaginosa DY-18] Length = 219 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K+SA +R GKG AR +R G IPA+IYG+ +PK + L + N I Sbjct: 4 TIKISATVRSDFGKGYARRIRMAGDIPAVIYGHGEEPKHVVLPGHATTLAARVPN---AI 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L LDI E + KD Q + L H D L V G V + VPV E + Sbjct: 61 LDLDIEGESHLAMIKDIQRHAIRPELQHIDLLTVKRGERVEIEVPVHVEGEPAVGAVANQ 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + A P+++TV + + G + D+ LP + ++ + I + Sbjct: 121 EETV-----LLVEADALKAPEALTVSIEGREAGAHVLASDVELPSGVTLVADAELLIVNV 175 Query: 185 VAP 187 P Sbjct: 176 SEP 178 >gi|225011226|ref|ZP_03701685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] gi|225004640|gb|EEG42603.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Flavobacteria bacterium MS024-3C] Length = 210 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG P + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKKATKALRNAGMVPCVIYGGDK-PVHFSAAELAFKPLIYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G + + +D Q PV+D ++H DF Q+ VT+ +PV+ SPG++ Sbjct: 60 VTVDLADGT-KIDAVLQDIQFHPVTDKILHIDFYQLFSDKPVTMSIPVQLE--GNSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG++ ++ + ++PD +VD++ LKIG +I + + L EK + + + I Sbjct: 117 NGGRMLFRKRKLMIKALPGDLPDFFSVDISKLKIGGTIAVSSL-LDEKYTFLQPESTAIV 175 Query: 183 TIVAPISG 190 + + Sbjct: 176 QVKTSRTA 183 >gi|163841717|ref|YP_001626122.1| 50S ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] gi|162955193|gb|ABY24708.1| LSU ribosomal protein L25P [Renibacterium salmoninarum ATCC 33209] Length = 229 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+A +R + GKG+AR R+ QIPA+IYG+ ++P IAL ++ + N Sbjct: 25 MSETKLAAQLRTEFGKGAARRARRANQIPAVIYGHGAEPIHIALPERETIRAARGAN--- 81 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +LTLDI E + KD Q DPV I+ H D L V G VTV +PV E + Sbjct: 82 ALLTLDINGEEHLALVKDIQRDPVLQIIEHIDLLTVRRGEKVTVDIPVVLTGEVAPGAV- 140 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +N + +S+ A ++P S+ V + G+ + DI LP+ S ++ IA Sbjct: 141 ----VNQDANTISVEAEATHLPSSLEVSIEGRNPGEHVFASDIVLPQGVSLLADAETLIA 196 Query: 183 TIVAP 187 I P Sbjct: 197 NISEP 201 >gi|227501529|ref|ZP_03931578.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] gi|227077554|gb|EEI15517.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium accolens ATCC 49725] Length = 221 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ + A R GKG AR LR++ ++P +IYG+ +P A+ DI + N Sbjct: 1 MAERPI-IKAEPRTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDIQSLVR-NNG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K+ + ++ + H D L + G V V VP+ E+ Sbjct: 59 VNAVLELEIEGEQYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGESAP-- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + NIP+ I + + L+ G+ I DI +PE T+ ++ Sbjct: 117 ---GTMHIQDADVLMVEADVLNIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETV 173 Query: 181 IATIVAP 187 I +I P Sbjct: 174 ILSITLP 180 >gi|89069015|ref|ZP_01156396.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] gi|89045384|gb|EAR51449.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516] Length = 210 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 1/190 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R++ GKG AR R+NGQ+P ++YG DP PI L + RL F Sbjct: 1 MAGEIPDLVASKRERTGKGGAREARRNGQVPGVVYGGGVDPLPINLEYNSLLTRLRKGRF 60 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++T+ L + G++ V VI + Q D V D+ H DF+++ S V + +PV F N +P Sbjct: 61 LSTLFNLKVEGEDDVRVICRGVQRDVVKDLPTHVDFMRLRRTSKVNLFIPVEFENHGAAP 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GIK+GG L VV EV L+ A +IP+ ITVDL L+IGD++ + + LPE + Sbjct: 121 GIKRGGVLTVVRPEVELVVTAGDIPEKITVDLTGLEIGDTVTISSVDLPEGAKPTIDRDF 180 Query: 180 TIATIVAPIS 189 IA + AP Sbjct: 181 VIANVSAPSG 190 >gi|160900866|ref|YP_001566448.1| 50S ribosomal protein L25/general stress protein Ctc [Delftia acidovorans SPH-1] gi|226736305|sp|A9BP18|RL25_DELAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160366450|gb|ABX38063.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Delftia acidovorans SPH-1] Length = 209 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++ + I + + L + F ++IL Sbjct: 1 MQFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ + V+ +D Q P +++H DF +V + + V + VP+ F +S +K + Sbjct: 61 DMEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVEN 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C +P+ ITVDL+ L ++ ++ ++LP ++ S N + Sbjct: 121 CTITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGLKLPNGVKAVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 ISIKLP 186 >gi|298252739|ref|ZP_06976533.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] gi|297533103|gb|EFH71987.1| ribosomal protein L25 (general stress protein Ctc) [Gardnerella vaginalis 5-1] Length = 207 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K L +R + GKG AR LR IPA +Y ++P + L ++ + L N Sbjct: 1 MATK-ITLEGELRTEFGKGVARRLRVAQLIPASLYAGGAEPVHVTLPMRETTLALRHAN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ GKE + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKFGKESRIAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + V E+ + N+P+ + V+++ L G + +D++LPE + Sbjct: 117 V-----AFVDVQELKVRADVANLPERLVVNVDGLTDGIKVFAKDVKLPEGVELDMDGEES 171 Query: 181 IATIV 185 + ++ Sbjct: 172 VVSVT 176 >gi|108801217|ref|YP_641414.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. MCS] gi|119870368|ref|YP_940320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. KMS] gi|126437197|ref|YP_001072888.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium sp. JLS] gi|108771636|gb|ABG10358.1| LSU ribosomal protein L25P [Mycobacterium sp. MCS] gi|119696457|gb|ABL93530.1| LSU ribosomal protein L25P [Mycobacterium sp. KMS] gi|126236997|gb|ABO00398.1| LSU ribosomal protein L25P [Mycobacterium sp. JLS] Length = 222 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL+A +R + GKG++R R+ G++PA++YG+ +DP+ + ++A+D + L +LT Sbjct: 8 KLTAAVRTETGKGASRRARREGKVPAVLYGHGTDPQHLEVNARDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V G VTV V V + + Sbjct: 67 LDIDGTEQLALTKSLEIHPIRRNIQHADLLVVRRGEKVTVEVNVVVEGDATPGAL----- 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV- 185 + + + + +IP+ +TV + + G I + LP + +S + IV Sbjct: 122 VTQEANAIEIEADVQSIPEQLTVSVEGAEEGTQITAAQVELPSGVTLISDPETLVVNIVS 181 Query: 186 APIS 189 AP + Sbjct: 182 APSA 185 >gi|319949668|ref|ZP_08023702.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] gi|319436659|gb|EFV91745.1| 50S ribosomal protein L25/general stress protein Ctc [Dietzia cinnamea P4] Length = 209 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 8/190 (4%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + KL+A +R + GKG++R R++ ++PA++YG+ ++P+ + L A + + L Sbjct: 1 MSDVNKLAATVRTEFGKGASRRARRDFKVPAVLYGHNTEPRHLLLGALEFAAILRH-AGT 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +LTLDI E +PK + P++ ++ H D + V +G V V + + +PG Sbjct: 60 NALLTLDIEGEEQLALPKQIDVHPLTRVIEHTDLIVVRKGEKVVVEI-AVLVTGEAAPGT 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +V+ EV A NIP+ V + D + G I D+ LP + +S + Sbjct: 119 LVTTDADVIEVEV----DALNIPEDFEVSVEDAQAGTQITAADVTLPAGATLISDPETLL 174 Query: 182 ATIV-APISG 190 ++ AP Sbjct: 175 VNVMEAPSGA 184 >gi|197119140|ref|YP_002139567.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter bemidjiensis Bem] gi|226736325|sp|B5EHX2|RL25_GEOBB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|197088500|gb|ACH39771.1| ribosomal protein L25 [Geobacter bemidjiensis Bem] Length = 197 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A +R++ GKG R LR G++PA++YG P I+L K++S+ + + Sbjct: 1 MSKQVLKAELREQTGKGICRRLRAAGRVPAVVYGKGIAPVSISLGQKELSEAIAGEGGRN 60 Query: 63 TILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTL+ EL VI D D + ++ H D +++ V VHV + + G Sbjct: 61 HILTLECAGELNGASVIVADLLRDSLKNVPRHVDLHKINLADKVKVHVKLNLVGTPA--G 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L+ HEV + C +IP I VD+ +L IG S+H+ I P T+ +S + Sbjct: 119 VKAGGFLDFAMHEVEVECLPVHIPAHINVDVAELLIGHSVHVGQIVAPIGTAILSDPKAS 178 Query: 181 IATIVAPIS 189 + +I+ Sbjct: 179 VVSILGRKG 187 >gi|281356645|ref|ZP_06243136.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] gi|281316772|gb|EFB00795.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Victivallis vadensis ATCC BAA-548] Length = 209 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +++ R GK ++R RK GQIPA +Y + K + A Sbjct: 1 MSNVSNEIAVQERKDFGKNASRRARKAGQIPASVYSKGKESKSFLVDADAWKVLTGHHGS 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +TL G +H + K+ Q + + + + H DF +V + VPV +S G Sbjct: 61 HM--VTLKNGDAEIHALIKEVQFNYLKNYVYHIDFQEVDMDKEIVAAVPVH--AHGESVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 GG L HE+ ++C ++P+++T D+ L G+ + ++D+ LP+ + Sbjct: 117 AAHGGILEQELHELEVICRPADLPEAVTADVTKLDKGEHLCVKDLVLPQGVRTEVDGETI 176 Query: 181 IATIVAPI 188 + + P Sbjct: 177 VFHVGLPK 184 >gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597] Length = 188 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P I+YG +DP PI + D+ K+L + F+ T+ L + G + V VI ++ Q D V Sbjct: 1 MVPGIVYGGDNDPLPIQIPFNDLLKKLKAGRFLATLWNLKVDGHDDVRVICRNVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S V +H+PV FINE+ +PGIK+GG L VV +V L A +IP+ I Sbjct: 61 DLPTHLDLMRLRRTSRVNLHIPVEFINEDAAPGIKRGGVLTVVRADVELNVLAGDIPEKI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL L+IGD++ + + LP+ + IA + AP Sbjct: 121 VVDLTGLEIGDTVTISMVNLPDGVKPTIDRDFVIANVSAPSG 162 >gi|325280762|ref|YP_004253304.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] gi|324312571|gb|ADY33124.1| 50S ribosomal protein L25 [Odoribacter splanchnicus DSM 20712] Length = 190 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 98/188 (52%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +L +R +GK + LLR G++P ++YG + ++ KD+ K LY+ Sbjct: 1 MQVFELQGELRTDLGKKATNLLRAEGKVPCVLYG-GKENVHFSVVEKDLQKLLYTPVVYI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ + + ++ Q PVSD ++H DF Q+SE V + VPV+ + + G++ Sbjct: 60 --VKVNVAGQSYEAVMREIQFHPVSDRVLHMDFYQISEDKPVIMEVPVKL--QGFAEGVQ 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL++V ++ + N+P I +D+ +L +G SI ++D+ E ++ + +A Sbjct: 116 AGGKLSLVVRKLKVKAIPANLPGEIVLDVTNLGLGKSIKVKDLSF-ENFEIVNAKEVVVA 174 Query: 183 TIVAPISG 190 I + Sbjct: 175 QIKLTRAA 182 >gi|296454050|ref|YP_003661193.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] gi|296183481|gb|ADH00363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bifidobacterium longum subsp. longum JDM301] Length = 207 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL R + GKG AR LR +IPA IY +P + L ++ + L N Sbjct: 1 MAT-TIKLEGEARSEFGKGVARRLRVAKKIPATIYAGGEEPAFVTLPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ + KD Q +PV I+ H DFL+V G + V VPV K Sbjct: 59 --ALFTIAFDGNTKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V + L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVTNLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEDPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|325265863|ref|ZP_08132549.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] gi|324982501|gb|EGC18127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella denitrificans ATCC 33394] Length = 190 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ + A +R G G++R LR ++PA++YG + K IA+ K++ L + F Sbjct: 1 MNM--TVIQATLRSAQGTGASRRLRNENKVPAVVYGLG-ESKAIAVDHKEMYFALQKEAF 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T +L L I + VI +DYQ+ PV + H DF + V + +PV +N KS Sbjct: 58 FTQVLKLSIDGKEQDVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRMKLPVHIVNAEKSHA 117 Query: 121 IK-QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---Q 176 +K Q G+++++ V +L NIP ++ +D + GD +H+ DI PE S++ Sbjct: 118 VKLQSGRVSLLMTVVDVLVNPKNIPAALELDCEKVVAGDILHLSDITYPEGVQSIALKRN 177 Query: 177 LNITIATIV 185 N+ +AT+ Sbjct: 178 SNLAVATVT 186 >gi|306835690|ref|ZP_07468696.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] gi|304568408|gb|EFM43967.1| 50S ribosomal protein L25 [Corynebacterium accolens ATCC 49726] Length = 237 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 7/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ + A R GKG AR LR++ ++P +IYG+ +P A+ DI + N Sbjct: 17 MAERPI-IKAEPRTVFGKGYARRLRRDWKVPGVIYGSDQEPVHFAVPLLDIQSLVR-NNG 74 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L L+I E + K+ + ++ + H D L + G V V VP+ E+ Sbjct: 75 VNAVLELEIEGEQYLTMVKNVDQNVLTMDIDHVDLLLIKRGEKVEVEVPITLTGESAP-- 132 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + +IP+ I + + L+ G+ I DI +PE T+ ++ Sbjct: 133 ---GTMHIQDADVLMVEADVLSIPEEIELSIEGLEDGEVITAADITMPEGTTLVADPETV 189 Query: 181 IATIVAP 187 I +I P Sbjct: 190 ILSISLP 196 >gi|291456700|ref|ZP_06596090.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] gi|291381977|gb|EFE89495.1| ribosomal protein L25, Ctc-form [Bifidobacterium breve DSM 20213] Length = 218 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL +R++ GKG AR LR +IPA IY +DP + L ++ + L N Sbjct: 10 MAT-TIKLEGEVRNEFGKGVARRLRVANKIPATIYAGGADPAFVTLPMRETTLALRHTN- 67 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T++ G E + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 68 --ALFTIEFGGESKMAVVKDVQKNPVKRIIEHIDFFEVKAGEKIDVEVPVFVEGTPKGAA 125 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + +N+P+ I V++ L G + +DI LPE + Sbjct: 126 VAFVDI-----QELKVRADISNLPEKIVVNVEGLTDGTKVFAKDIELPEGAELDVEHAEE 180 Query: 180 TIATIVAP 187 ++ TI P Sbjct: 181 SVVTIEVP 188 >gi|229542278|ref|ZP_04431338.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] gi|229326698|gb|EEN92373.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus coagulans 36D1] Length = 209 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A R+ S+R LR+NG IP ++YG ++ P+ ++ + K L +N Sbjct: 1 MAEV-LEAKKREDKHHSSSRRLRRNGYIPGVVYGYQTENTPVYVNDTEFEKLLR-ENGRN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L+L++ +V+ + Q DP+ + +IH DFL V+ V VR + +S G+K Sbjct: 59 AVLSLNVNGTQRNVMVHEVQTDPLKNKIIHVDFLAVNMSE--DVDATVRVVLTEESAGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L HE+S+ + IPD+ITVD+++L++ ++I + DIR + + TI Sbjct: 117 DGGVLQQALHELSITAKPDEIPDAITVDVSNLQVNENITVADIRGKYGFTINHEDTETIC 176 Query: 183 TIVAPI 188 +++ P Sbjct: 177 SVLPPR 182 >gi|282858294|ref|ZP_06267479.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] gi|282588925|gb|EFB94045.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010] Length = 197 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYSKN 59 KE KLS R+ +GK ++RL+RK G +P +YG + P ++ ++ R Sbjct: 1 MKEIKLSGQKRNDLGKKASRLMRKEGLVPCNLYGEKKENGIPVALSFASPMSELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L I E I KD Q P +D L+H DF +V+E + + VPV+ + Sbjct: 61 PNIYGVELTIDGEKHLAIMKDLQFHPTTDALLHVDFYEVTEEKEIIMGVPVKL--AGLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P N IP+ +++D+ L++G +I + + E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPFNKIPEFLSIDVTALQLGKAIKVGQLSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|21674184|ref|NP_662249.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium tepidum TLS] gi|71153133|sp|Q8KCQ1|RL25_CHLTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21647347|gb|AAM72591.1| general stress protein Ctc [Chlorobium tepidum TLS] Length = 199 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R+ G+A+ LR+ GQ+PA++Y I++ ++K ++S Sbjct: 1 METRALSVNLREVKKNGAAK-LRRLGQVPAVVYHKGEATVAISVEEISLNKLVHSSESHM 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK V KD Q DPV+D +IHADF S V + VP+ E I Sbjct: 60 IDLQYPDGK-SVRSFIKDVQFDPVTDRVIHADFQLFSTDEVVEMEVPIHLEGECPGVKIG 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNIT 180 G + H + L +P+ T+D++ L++G ++H+ D++ PE + + + Sbjct: 119 GGKI-QINVHTLPLKGKPEAMPEHFTIDVSALELGQTLHIRDLQAIAPEGVQILGDADTS 177 Query: 181 IATIVAPI 188 + ++VAP Sbjct: 178 VVSVVAPR 185 >gi|332971074|gb|EGK10044.1| 50S ribosomal protein L25 [Desmospora sp. 8437] Length = 223 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 2/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++ +R K + LR+ G++PA++YG + + I L A + K L + Sbjct: 23 IAVTIRQKYPRSLLTKLRREGRVPAVVYGKGMENELIHLEAGQVIKMLQQEGTSAIYELQ 82 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++ Q D + D +IH DF +V + V + + G+K+GG L Sbjct: 83 YPGGKSRQVMIRELQQDRIKDKIIHIDFNEVKLDEPIDTEVYIELT--GEPTGVKEGGIL 140 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + C ++PD + ++ L IGD++ ++ +P++ ++ +AT++ P Sbjct: 141 QHQLRSVEVRCLPADLPDRLEGEITHLAIGDTLTAAELPIPDRVELLTDPEEMVATVLPP 200 Query: 188 I 188 Sbjct: 201 R 201 >gi|32476153|ref|NP_869147.1| 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] gi|71153164|sp|Q7UKU9|RL25_RHOBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32446697|emb|CAD76533.1| probable 50S ribosomal protein L25 [Rhodopirellula baltica SH 1] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 6/181 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + R+ G + R LR++G +PA++YG+ + +A+ + + L + + Sbjct: 12 IQVTKRESTGTAATRRLRRDGHVPAVLYGHGEANEHLAVPSAQVKGLLRHHSKTVQL--- 68 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + D Q DP+ ++H D ++V+ V + VP+ ++ G+++GG L Sbjct: 69 -SGDVDETALVSDMQWDPLGIEVLHMDLIRVNLKEKVELGVPIVL--HGEAVGVREGGML 125 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HEV + C A +IPD++ +++++L +G+ D+ LPE ++ +++ IA I A Sbjct: 126 LENVHEVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPEGVELITDVDVVIAHIEAQ 185 Query: 188 I 188 Sbjct: 186 R 186 >gi|158319104|ref|YP_001511611.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139303|gb|ABW17615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 191 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Query: 11 VMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIG 70 +R VGK S+ LR+ G +PA+IYG+ + PI L ++ + + + N ++TL+I Sbjct: 8 EVRKNVGKNSSHRLREKGYVPAVIYGSNINTIPIELDHNEVQECIRNNNG-GGLVTLNID 66 Query: 71 KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 + V K+ Q DPV+ +IH DF QV + + V VP+ KS + G L Sbjct: 67 ENDYTVFIKEIQKDPVTGNIIHLDFQQVDQNEKIHVLVPIILK--GKSNIKRSGSILQQQ 124 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ + C ANNIP ++ VD++ K GD++ + D+ E+ S + IA++ Sbjct: 125 LRDLEVECSANNIPKALEVDISHFKPGDTLKVGDVEFGEEISIVHDAESIIASVA 179 >gi|226365173|ref|YP_002782956.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus opacus B4] gi|254801058|sp|C1AY16|RL25_RHOOB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226243663|dbj|BAH54011.1| 50S ribosomal protein L25 [Rhodococcus opacus B4] Length = 208 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + +++ + L + Sbjct: 1 MSDEN-RLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSREFAAILR-AHG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +LTLDI + + K + P+ + + HAD L + +G VTV VPV E S Sbjct: 59 TNAVLTLDIDGKEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAASGT 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + VSL A +IP+ I V + L++G I + LP+ + + + Sbjct: 119 L-----VAQDAATVSLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGATLQADEELL 173 Query: 181 IATIV-APISG 190 I +V AP + Sbjct: 174 IVNVVAAPTAA 184 >gi|317507883|ref|ZP_07965581.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] gi|316253812|gb|EFV13184.1| ribosomal protein L25 [Segniliparus rugosus ATCC BAA-974] Length = 207 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 6/189 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + ++ A +R + GKG++R R++GQ+PA++YG+ ++PK L AK+ ++ L N Sbjct: 1 MAETARVEATVRTEFGKGASRRARRDGQVPAVLYGHGAEPKHFNLPAKEFARVLR-ANGT 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++L G E I K + P L H D V G + V VPV + S G+ Sbjct: 60 NAVVSLTAGGEEHLAITKLVVVHPTKSYLQHIDLQIVRRGERIAVEVPVVVVGTPISGGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L + + A +IP+ I V ++ L+IG I ++ LP+ S + Sbjct: 120 -----LQHEATVLPVEAEALHIPEQIEVSIDGLEIGSKILAGELELPQGVSLTGDSEQLV 174 Query: 182 ATIVAPISG 190 I + Sbjct: 175 VQINEARAA 183 >gi|255536668|ref|YP_003097039.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacteriaceae bacterium 3519-10] gi|255342864|gb|ACU08977.1| LSU ribosomal protein L25p [Flavobacteriaceae bacterium 3519-10] Length = 211 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 10/193 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG + SA++ S + Sbjct: 1 MKSITIQGTKRENVGKKSTKALRDAELVPCVVYGGAET---LNFSAEERSFKGLVYTPEA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ + + +D Q P++D ++HADF Q+ E V + VPVR +K G+ Sbjct: 58 HTVSIEVDGNTIPAVLQDIQFHPLTDKILHADFYQLDENKPVVMEVPVRLTGRSK--GVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + ++ L N+PD I VD+ LKIG +++ DI E + M N + Sbjct: 116 AGGAMRQSFRKLKLKALPANLPDEIVVDVTPLKIGSKLYVGDIPT-ENFTFMHPDNAVVV 174 Query: 183 TI----VAPISGS 191 + A G+ Sbjct: 175 AVKMSRTASKGGA 187 >gi|163786662|ref|ZP_02181110.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] gi|159878522|gb|EDP72578.1| 50S ribosomal subunit protein L25 [Flavobacteriales bacterium ALC-1] Length = 220 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK S + LR GQ+P +IYG P + SK +Y+ + T Sbjct: 1 MKSITINGSQRESVGKKSTKALRNAGQVPCVIYGGDK-PLHFSAPELAFSKLVYTASAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD G+ + I +D Q PV+D +IH DF Q+ E +T+++PV+ + +K G+ Sbjct: 60 VVIALDNGE-KYNAIMQDIQFHPVTDRIIHIDFYQIFENKAITMNIPVQVVGTSK--GVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + + +PD I +D+ LKIGD +++ ++ + + S + N+ + Sbjct: 117 NGGNLRRPYRKLKVKAIPSKLPDFIEIDITPLKIGDKVYISEL-MNDDYSLIHPDNMVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|295401983|ref|ZP_06811945.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|312109199|ref|YP_003987515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] gi|294975985|gb|EFG51601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus thermoglucosidasius C56-YS93] gi|311214300|gb|ADP72904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. Y4.1MC1] Length = 210 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IP I+YG + K I ++ D K + + +++ Sbjct: 3 VVLEAKERTDRKHSTTRRIRLQGNIPGILYGKNVENKMIFVNGSDFQKTIR-EAGRHSLI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V+ +D Q D + ++H DF V + V + V +RFI ++ G+K GG Sbjct: 62 TLKLNDEEYSVLLRDVQRDSLRGNILHVDFQAVDMSTEVDIDVDIRFI--GEAAGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H++S+ NIP SI +D++ L+IGD+I + D++ K + + IATI+ Sbjct: 120 VLQQNLHQLSIRVLPANIPPSIDIDISHLQIGDTITVGDVKTDGKYEINHEPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|325286677|ref|YP_004262467.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] gi|324322131|gb|ADY29596.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489] Length = 203 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G +P ++YG P + +Y+ N T Sbjct: 1 MKSITITGSKRESVGKKATKALRNAGMVPCVVYG-GEQPLHFSAPELAFKDLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G+ V+ + +D Q PVSD +IH DF Q+ + VT+ +PVR + SPG++ Sbjct: 60 VVIDLENGE-KVNAVIQDIQFHPVSDRIIHIDFYQLFDDKAVTMDIPVRLV--GNSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ +PD VD+N LKIG +I + + + + + + N + Sbjct: 117 NGGRLLFRKRKLTIKALPAKLPDFFDVDINKLKIGGNIAVSSL-VNDDFTILHPDNTVVV 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|300864146|ref|ZP_07109041.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] gi|300337874|emb|CBN54187.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506] Length = 201 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E + R + K LR++G IPA++YG+ ++ + ++AK + L Sbjct: 2 ELTVECQKRAEGSK--PNALRRSGLIPAVLYGHSGAESIALTINAKTVETLLKKHVVNNA 59 Query: 64 ILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I + ++ Q+ P H F V+ ++ V V + FI Sbjct: 60 LIQLNIPDISWSGKTLLREVQVHPWKGHPYHLSFFSVATQDSLEVEVNLHFIG-EAVGVK 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG L+ V ++ L C +NIP++I VD++++ +GD++H+ +++LPE + + + + + Sbjct: 119 MEGGILDPVLTQLKLKCKPDNIPEAINVDISEMHVGDALHIHELQLPEGVTPVGEPDQVV 178 Query: 182 ATIVAPISG 190 +++ G Sbjct: 179 VSVLISQGG 187 >gi|261405476|ref|YP_003241717.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281939|gb|ACX63910.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 210 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ Sbjct: 1 MSKGNTVQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGR 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 L + G V V+ KD Q + H DFL++S V V +PV + + + Sbjct: 61 SEVFQLDIP-GSGKVPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIPVDY--QGTAA 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K GG L E+ + ++P ++ D++ L+IGD + + D+++PE + + Sbjct: 116 GTKSGGILQTQVTEIEVEGLPGDLPTTLEADVSALEIGDKLTVADLKVPEGITLHASEEE 175 Query: 180 TIATIVAPI 188 +AT++ P Sbjct: 176 ILATVIVPR 184 >gi|86140922|ref|ZP_01059481.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] gi|85832864|gb|EAQ51313.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella blandensis MED217] Length = 209 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG P+ +A +I+ + Sbjct: 1 MKSITITGSKRESVGKKATKALRNAGEVPCVLYGGDE---PVHFNAPEIAFKDLVYTPDA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TL++ I +D Q PV+D ++H DF Q+ EG VT+ +PV + S G++ Sbjct: 58 HTATLELDGNTYMAILQDIQFHPVTDRILHIDFYQIFEGKEVTMTIPVHYE--GNSRGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD + D+ LKIGD +++ I E + N + Sbjct: 116 NGGVLRKTYRTLRVKALPKNLPDYVVADITKLKIGDKLYITGIEQGE-WKYLHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|332291640|ref|YP_004430249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] gi|332169726|gb|AEE18981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Krokinobacter diaphorus 4H-3-7-5] Length = 211 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG P+ SA +++ + Sbjct: 1 MKSVSIHGSKRESVGKKATKALRNAGLVPCVVYGGD---TPLHFSAPELAFKELVYTPDA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ V I +D Q PV+D ++H DF Q+ EG VT+++PV F S G+ Sbjct: 58 HTVEIELDGVTVKAILQDIQFHPVTDRILHIDFYQIFEGKEVTMNIPVHFT--GNSRGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD + D+ +LKIG+ +++ + E + M N + Sbjct: 116 NGGVLRKTNRVLRVKALPKNLPDYLVADITNLKIGNKLYIGALPQ-ENLTLMHPDNTVVC 174 Query: 183 TIVAPISG 190 + + Sbjct: 175 QVRTSRTA 182 >gi|41407077|ref|NP_959913.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464181|ref|YP_880402.1| 50S ribosomal protein L25 [Mycobacterium avium 104] gi|254774032|ref|ZP_05215548.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium avium subsp. avium ATCC 25291] gi|71153152|sp|Q741V8|RL25_MYCPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41395428|gb|AAS03296.1| RplY [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165468|gb|ABK66365.1| ribosomal protein L25, Ctc-form [Mycobacterium avium 104] Length = 219 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 8/189 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M ++ L+A +R + GKG++R R+ G+IPA++YG+ +DP+ + L D + L Sbjct: 1 MAKQALNQLTAAVRTETGKGASRRARRAGKIPAVLYGHGTDPQHLELPGHDFAAVLRH-A 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI + + K + P+ + HAD L V G V V V V + Sbjct: 60 GTNAVLTLDIDGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVVVEVTVVIEGDAAPG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + A +IP+ TV + D + G I LP+ + +S + Sbjct: 120 SL-----VTQEASTIEIEAEALSIPEQFTVSVEDAEPGTQFTAGQIALPKGVNLISDPEL 174 Query: 180 TIATIV-AP 187 + +V AP Sbjct: 175 LVVNVVNAP 183 >gi|329925390|ref|ZP_08280312.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328939877|gb|EGG36214.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 210 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +RD+ + S R LR++G +P ++YG + P+A+ KD +K ++ Sbjct: 1 MSKGNTVQLKANVRDEFTRASRRELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGR 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 L + G V V+ KD Q + H DFL++S V V +PV + + + Sbjct: 61 SEVFQLDIP-GSGKVPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIPVDY--QGTAA 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K GG L E+ + ++P ++ D++ L+IGD + + D+++PE + + Sbjct: 116 GTKSGGILQTQVTEIEVEGLPGDLPTTLEADVSTLEIGDKLTVADLKVPEGITLHASEEE 175 Query: 180 TIATIVAPI 188 +AT++ P Sbjct: 176 ILATVIVPR 184 >gi|320104416|ref|YP_004180007.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] gi|319751698|gb|ADV63458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Isosphaera pallida ATCC 43644] Length = 202 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 5 ECKLSAVMR-----DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 KL A R G AR LR+ G IPAIIYG+ PI L D+ + + ++ Sbjct: 4 TVKLEAQARSPEKNKGTGTRVARKLRQQGLIPAIIYGHKEPNLPIVLKHDDVWRIIKQQS 63 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + L + + V+ + Q D +S +IH DF +VS TV V + F Sbjct: 64 H---RVDLVVAGKTEEVLVRHVQWDHLSRDIIHLDFYRVSPEETVESIVRLEFKGTPA-- 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ GG L HE+ + C A++IPD I VDL+ L++G S++ D+ LP ++ Sbjct: 119 GVAAGGLLETPVHELKVDCRADSIPDLIAVDLSGLELGQSLYARDVPLPAGVKLHGNPDL 178 Query: 180 TIATIVA 186 +A +VA Sbjct: 179 LVAHVVA 185 >gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Alicycliphilus denitrificans BC] gi|330823568|ref|YP_004386871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] gi|317116258|gb|ADU98746.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans BC] gi|329308940|gb|AEB83355.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alicycliphilus denitrificans K601] Length = 208 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 1 MQFVAYERAKQGTGASRRLRISGKAPGIVYGGSAEPQMIEVDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +++ ++ V+ +D Q P ++H DF +V + + V + VP+ + SP +K+ G Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVPLHYEGLEGSPAVKEEG 120 Query: 126 KLNVV-CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 HEV ++C + +P+ ITVDL+ L + ++ +++P + S N + Sbjct: 121 CTVTPLIHEVDVMCMPSQLPEFITVDLSGLTSKSAPGVQSLKIPNGVKIVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 VSIKLP 186 >gi|303238070|ref|ZP_07324611.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] gi|302481766|gb|EFL44820.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN] Length = 200 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 100/189 (52%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYSKN 59 K+ ++S R+ +GK +++ LRK G IP +YG + + P +A ++ R Sbjct: 1 MKQIQISGKKREIIGKKASKELRKEGLIPCNLYGEVKEDGKPVALAFASPMAELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q P +D ++H DF +V+E + + VPV + + Sbjct: 61 PHIYVVELTIDGEKRLAVMKEIQFHPTTDAVLHIDFYEVNETKPIVMGVPV--KHTGLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P ++IP+++ +D+ +L+IG SI + D+ E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYSHIPETLEIDVTNLRIGKSIKVGDLSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|253700098|ref|YP_003021287.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter sp. M21] gi|259646688|sp|C6E500|RL25_GEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|251774948|gb|ACT17529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. M21] Length = 197 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +R+K GKG R LR G++PA++YG P I+L K++S+ + + Sbjct: 1 MSKQVLKVELREKTGKGICRRLRAAGRVPAVVYGKGITPVSISLGQKELSEAIAGEGGRN 60 Query: 63 TILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTL+ EL +VI D D + + H D +++ V VHV + + G Sbjct: 61 HILTLECAGELNGANVIVADLLRDSLRNQPRHVDLHKINLADKVKVHVKLNLVGTPA--G 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L+ HE+ + C +IP I VD+ +L IG S+H+ +I P T+ +S Sbjct: 119 VKAGGFLDFAMHEIEVECLPVHIPAHINVDVTELLIGHSVHVGEIAAPIGTAILSDPKAA 178 Query: 181 IATIV 185 + +I+ Sbjct: 179 VVSIL 183 >gi|227545903|ref|ZP_03975952.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213697|gb|EEI81543.1| 50S ribosomal protein L25 [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 206 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M KL R + GKG AR LR +IPA IY +P + L ++ + L N Sbjct: 1 MAT-TIKLEGEARSEFGKGVARRLRVANKIPATIYAGGEEPAFVTLPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ + KD Q +PV I+ H DFL+V G + V VPV K Sbjct: 59 --ALFTIAFDGNTKMAVVKDVQKNPVKRIIEHVDFLEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V + L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVSVEGLTDGTKVFAKDVVLPEGVELDVEAPEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|223936333|ref|ZP_03628245.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] gi|223894851|gb|EEF61300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [bacterium Ellin514] Length = 245 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L+A R +G A+ LR +G+IPA+IYG + + +++KDI ++ Sbjct: 1 MKSVALNAFPRVMARRGGAKKLRDSGRIPAVIYGRQQQAQNLEVNSKDIENLIHHSVSEN 60 Query: 63 TILTL---DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L D + + ++ Q P++ ++H DF +V+E VT+ VPV Sbjct: 61 LLVDLAVKDDSRPKRLALVQEVQHHPLNGKMLHVDFHEVAENERVTIMVPVEATG-EAVG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GG L V ++ + ++P+ I VD+++L+IG +IH+ DI+ PE + +I Sbjct: 120 VKTGGGVLEHVLFKIKVRALPKDLPEVIAVDVSNLEIGQAIHIGDIKAPEGVEVLGDKHI 179 Query: 180 TIATIVAP 187 ++ + AP Sbjct: 180 SVIAVAAP 187 >gi|304405246|ref|ZP_07386906.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] gi|304346125|gb|EFM11959.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus curdlanolyticus YK9] Length = 227 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 L+ R K R LR G++P +IYG+ + P IAL+ +D+ L + Sbjct: 3 IPLTVEARATRTKRELRELRGQGKVPGVIYGSGLAGPTLIALAERDLLPLLRTHPNAVLD 62 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + G V+ + Q DP+S ++H D Q++ + HV R S G+++G Sbjct: 63 VAVPGGL-KEPVVISEVQRDPLSHQVVHIDLHQINMNEKLKTHV--RLEVTGDSTGVREG 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++ HE+ + C N +P+ I +++ L +G+++ + D+ LP + S + + TI Sbjct: 120 GILTLMLHELEIECLPNQLPEVIEINVASLGVGENLLVSDLTLPAGVTVRSDADQVVVTI 179 Query: 185 VAP 187 +AP Sbjct: 180 LAP 182 >gi|148927895|ref|ZP_01811306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] gi|147886757|gb|EDK72316.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [candidate division TM7 genomosp. GTL1] Length = 231 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 3/190 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + ++ R GK + LR++GQ+P ++YG +P + + K + Sbjct: 1 MANNDLTITLEKRAVAGKK-VKNLRRDGQVPGVVYGQGFEPISVQAPLVPLQKLVK-TAG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L+I + K+ +DPV ++L H F V + VT +PV +SP Sbjct: 59 KHHPVQLNIAGSKKTAMIKEISMDPVKNLLRHVAFHAVRQDEKVTADIPVVLEGLGESPA 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNI 179 + G + + + ++P+++TV + L + G + + D+ +P ++ Sbjct: 119 ERAGLVILTTVESLQVKAFPGDLPNALTVSTSTLSEAGQHLTVADLSIPSGVEIDAEPEQ 178 Query: 180 TIATIVAPIS 189 +A++ P + Sbjct: 179 VLASVYEPSA 188 >gi|218885592|ref|YP_002434913.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226736309|sp|B8DKL6|RL25_DESVM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218756546|gb|ACL07445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 191 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 6/191 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---SK 58 E K LS RD +GKG+ R LR +P + Y PI + + K Sbjct: 1 MSELKTLSVRKRDGLGKGANRKLRAKTLVPGVFYNAEGLNVPIEMDTLPVEKLFEAVGRT 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + K + Q PV + H DF V V + VP+ F K Sbjct: 61 TVFNIEVDDNGTKSTHPALFWQIQYHPVKNRFSHIDFRGVDLEKPVKIRVPLEFTGTAK- 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GGKL V + + +P IT+DL DL+IG +I + D+ L E +++ N Sbjct: 120 -GVKVGGKLEVYREALDISAKPLQMPSKITIDLTDLEIGKTISVNDLPLGEGVCAVADRN 178 Query: 179 ITIATIVAPIS 189 I +V+P Sbjct: 179 FAIVAVVSPKG 189 >gi|254821212|ref|ZP_05226213.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium intracellulare ATCC 13950] Length = 221 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 8/189 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M K L +R + GKG++R R++G+IPA++YG+ +DP+ + L D + L Sbjct: 1 MAAKTLNQLKVTVRAETGKGASRRARRDGKIPAVLYGHGADPQHLELPGHDFAAVLRH-A 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI + + K + P+ + HAD L V G V V V V + Sbjct: 60 GTNAVLTLDIEGKEQLALTKSLDIHPIRRTIQHADLLVVRRGEKVVVEVRVVIEGDAAPG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + A +IP+ +TV + D + G I LP+ + +S + Sbjct: 120 TL-----VTQETSTIEVEADAMSIPEQLTVSVEDTEPGTQFTAGQISLPKGVNLISDPEM 174 Query: 180 TIATIV-AP 187 + +V AP Sbjct: 175 LVVNVVNAP 183 >gi|313817232|gb|EFS54946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA2] gi|314961283|gb|EFT05384.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA2] gi|315086371|gb|EFT58347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA3] Length = 205 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 7/169 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + GKG+AR +R++ ++PA++YG+ DP + L L ++N + Sbjct: 5 IHLKAEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTEN-PLLSI 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ G++ + +PKD Q D + + H D L V G V V+V +R E+ G Sbjct: 64 EIE-GQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALRITGESAP-----GT 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 +E+ + NIP+ I +D+ L+ G +I++ D++LPE TS + Sbjct: 118 IAMTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLL 166 >gi|325858418|ref|ZP_08172580.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|327313924|ref|YP_004329361.1| 50S ribosomal protein L25, Ctc-form [Prevotella denticola F0289] gi|325483056|gb|EGC86044.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A] gi|326944809|gb|AEA20694.1| ribosomal protein L25, Ctc-form [Prevotella denticola F0289] Length = 204 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE K++ R +GK +++L+RK G +P +YG P ++ +A R Sbjct: 1 MKEIKVTGQKRTDLGKKASKLVRKEGLVPCNLYGEARKDGKPVALSFTASMAELRKLVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E + K+ Q PV+D L+H DF +V++ +T+ VPV+ + + Sbjct: 61 PHIYVVELVIDGESHTAVLKELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +++ DL++G SI + ++ E ++ + Sbjct: 119 GVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTDLRLGKSIKVGELSF-EGLELVTPKEV 177 Query: 180 TIATIVAPI 188 + +I A Sbjct: 178 VVCSIKATR 186 >gi|325478656|gb|EGC81767.1| ribosomal protein L25, Ctc-form [Anaerococcus prevotii ACS-065-V-Col13] Length = 216 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A R+ GK LR +PA+IY + + +++++ K L K + Sbjct: 1 MAEIVLQAQKREATGKNKVNKLRNEELVPAVIYAKGEENINVQVTSREFEKVLK-KAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TLD G E V+ K YQ P +I +H DF +++ T+ V VPV + + Sbjct: 60 TIITLDFGDEKKDVLIKAYQNHPFKNIFLHVDFQAINQNETIRVQVPVVLVGRDDIR--V 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 + L V + C IP + V+++DL+IGD+ + D+ + + + + + + Sbjct: 118 EPSVLVQNIDVVEVECLPRYIPQTADVEVSDLQIGDNRTVSDLDIAKVDDITILLEDDEV 177 Query: 181 IATIV 185 I ++ Sbjct: 178 ICSLQ 182 >gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11] Length = 179 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P +++G ++P I + ++ K+L + F +T+ L + G+E V VI +D Q D V Sbjct: 1 MVPGVVFGGDAEPMSIQIPFNELLKKLKAGRFKSTLWNLKVEGQEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ S V + VPV FINE +PGIK+GG L V EV L+ A +IP+ + Sbjct: 61 DLPTHFDLMRLRRTSKVNLFVPVEFINEEAAPGIKRGGVLTAVRPEVELVVTAGDIPEKL 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL L IGD++ + + +PE + +A I AP Sbjct: 121 VVDLTGLNIGDTVTISSVTMPEGAKPTIDRDFVVANISAPSG 162 >gi|157363317|ref|YP_001470084.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga lettingae TMO] gi|157313921|gb|ABV33020.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga lettingae TMO] Length = 216 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN---FMT 62 +L A++R++ GK S R +R G IPA++YG ++P I L+ ++ K L + + Sbjct: 1 MRLKAMLRNERGKRSVRKMRAKGLIPAVVYGPETEPLSINLNKSEVEKLLAKASEALPVG 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + D E + V K Q+D V+D ++H DF + ++G T+ ++VP+R K+ G++ Sbjct: 61 LEIKYDDRSEEMEVFIKKVQVDKVTDEIVHIDFYKPAKGHTMKINVPIRV--FGKAIGVE 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L +V +E+ + + + D I +D+ L++G S+H++D+RLP ++ + Sbjct: 119 KGGILEIVHNELPVETLPSALIDHIEIDVTHLELGQSVHVKDLRLPSGMKALLHPEEALV 178 Query: 183 TIVAPIS 189 TIV P Sbjct: 179 TIVVPRG 185 >gi|78357170|ref|YP_388619.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109893360|sp|Q30ZH2|RL25_DESDG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78219575|gb|ABB38924.1| LSU ribosomal protein L25P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 193 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 5/190 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M ++ LS R+ +GKG+ R LR ++P I Y + P+A+ + K Sbjct: 1 MS-QQMTLSVQKREGLGKGANRKLRTAKKVPGIFYNSEGKNIPVAIDGTQLEKLYE-TAG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ LDI E + + P H D V + +P++ K G Sbjct: 59 KTTVFNLDIEGETAPCLIWQIERHPYKPFFTHVDLFGVDMEKPIKARIPLKITGVAK--G 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GG++ V V + ++P I ++++++++GD++H+ D++L + + N Sbjct: 117 TKIGGRMEVYRDFVDVFTKPGSMPKVIDINVSNMEMGDAVHVADLKLEDG-HCIYDSNYV 175 Query: 181 IATIVAPISG 190 I + AP G Sbjct: 176 IVRVSAPRGG 185 >gi|281423251|ref|ZP_06254164.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|299140506|ref|ZP_07033644.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] gi|281402587|gb|EFB33418.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302] gi|298577472|gb|EFI49340.1| ribosomal protein L25, Ctc-form [Prevotella oris C735] Length = 204 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 96/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 KE +S R +GK +++ LRK G IP +YG + +S ++ K +Y Sbjct: 1 MKEINVSGQKRTDLGKKASKELRKQGFIPCNLYGEKKDADGRPEAHAFTVSFCELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I E I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 61 TPHIY--VINLNIDGEHHTAILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLT--G 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLEITTS 175 Query: 177 LNITIATI 184 ++ + ++ Sbjct: 176 KDVVVCSV 183 >gi|229817598|ref|ZP_04447880.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] gi|229785387|gb|EEP21501.1| hypothetical protein BIFANG_02866 [Bifidobacterium angulatum DSM 20098] Length = 204 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L+ R++ GKG AR LR G+IPA IY ++P +AL ++ + L N Sbjct: 1 MAN-TISLNGEARNEFGKGVARRLRVAGKIPATIYAGGTEPAYLALPMRETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ + + KD Q +PV I+ H DFL+V G + V VPV + K Sbjct: 59 --ALFSISFDGQNKMAVVKDVQKNPVKRIIEHIDFLEVKAGEKIDVEVPVFVEGQPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V++ L G + ++D+++PE M L Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVEGLTDGTKVLLKDVQMPEGAELDMDDLEE 171 Query: 180 TIATIVAP 187 ++ T+ P Sbjct: 172 SVVTVEVP 179 >gi|326383812|ref|ZP_08205497.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] gi|326197576|gb|EGD54765.1| 50S ribosomal protein L25/general stress protein Ctc [Gordonia neofelifaecis NRRL B-59395] Length = 202 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 +L+ R++ GKGSAR R GQ+PA++YG+ +DPK + L ++++ L N + ++ Sbjct: 6 QLATTAREEKGKGSARRARAAGQVPAVLYGHGTDPKHLLLPNRELAAILR-ANGVNAVVE 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + + H D L V G V V V + S + Sbjct: 65 LDIAGDKQLALTKQVDVHPIRNYIEHVDLLIVKRGEKVNVEVGIVIEGVAASGTL----- 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 V + A +IP++I VD+++L G +I D+ LP ++ I +I A Sbjct: 120 TIQDASVVEVEAEALHIPENIVVDVHNLAAGTNITAADLLLPAGVELVTDGEALIVSIEA 179 Query: 187 PISGS 191 + + Sbjct: 180 AKNAA 184 >gi|309801272|ref|ZP_07695401.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] gi|308222161|gb|EFO78444.1| ribosomal protein L25, Ctc-form [Bifidobacterium dentium JCVIHMP022] Length = 198 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR LR IPA +Y P + L K+ + L N Sbjct: 1 MAT-TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + I KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEE 171 Query: 180 TIATI 184 ++ T+ Sbjct: 172 SVVTV 176 >gi|255325403|ref|ZP_05366507.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] gi|255297489|gb|EET76802.1| ribosomal protein L25, Ctc-form [Corynebacterium tuberculostearicum SK141] Length = 217 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + N + +L L Sbjct: 7 IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDIQSLVR-NNGVNAVLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I E + K + ++ + H D L + G V V VPV E G Sbjct: 66 EIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGEPA-----AGTMH 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + NIP+ I V + L+ G I D+ +PE T+ +++ + I +I P Sbjct: 121 IQDADVLLVEADVLNIPEEIEVSIEGLEDGAVITAGDVTMPEDTTLVAEEDTVIVSISLP 180 >gi|256389402|ref|YP_003110966.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] gi|256355628|gb|ACU69125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora acidiphila DSM 44928] Length = 207 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 9/188 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++SA R + GKG AR R ++PA++YG+ + I L D+ L + N Sbjct: 1 MSQIRISAEDRTEFGKGFARRARAVNKVPAVVYGHGEPVRHILLPGHDLMIALRTPN--- 57 Query: 63 TILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L+ G V+PKD Q DPV L H D + V G VTV +P+ E + Sbjct: 58 VLLNLEFGDGKAQLVLPKDVQKDPVKRTLEHVDLVLVRSGEKVTVDIPITVTGE-----V 112 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G L+ + +++ A +IP I VD++ + G + + D+ LP + ++ + + Sbjct: 113 VGGAVLDHSLNNLTVTAEATHIPTGIEVDVDRKEEGFQLFVRDLELPAGSELVTDGDQLV 172 Query: 182 ATIVAPIS 189 +V + Sbjct: 173 LQVVVTRA 180 >gi|226307812|ref|YP_002767772.1| 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] gi|259646694|sp|C1A348|RL25_RHOE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226186929|dbj|BAH35033.1| probable 50S ribosomal protein L25 [Rhodococcus erythropolis PR4] Length = 202 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 7/186 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +E L AV+R + GKG+AR R++GQ+P ++YG+ DP+ + + A+D ++ L ++ Sbjct: 1 MS-EENNLVAVVRTEFGKGAARRARRDGQVPTVLYGHGEDPRHLNVPARDFARILRAQ-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + K + P+ + HAD L + +G VT+ V V + + Sbjct: 59 TNAILTLDIEGTEQVALTKSVVVHPIRSYIEHADLLVIKKGEKVTIDVHVVVVGDAA--- 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + +S+ A +IP+ I V + L+IG I + LP + + + Sbjct: 116 --AGTMVAQDASTISIEADALHIPEQIEVSVEGLEIGTQILASQLELPAGSVLQADADTL 173 Query: 181 IATIVA 186 I +VA Sbjct: 174 IVNVVA 179 >gi|325473900|gb|EGC77088.1| 50S ribosomal protein L25 [Treponema denticola F0402] Length = 211 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+A R GK +A +R+ G+IPA++Y PI + ++ K + Sbjct: 1 MEQRLLNANERSTYGKNAAVKMRRAGRIPAVMYDRHGKSVPIDVDEREFMKLFKLVT-ES 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TL+ + V KD+Q D VSD + H DF +V G T+ V +R G++ Sbjct: 60 TIVTLNAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRLE--GSPEGVR 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A Sbjct: 118 HGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVA 177 Query: 183 TI 184 I Sbjct: 178 AI 179 >gi|300726453|ref|ZP_07059899.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] gi|299776181|gb|EFI72745.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14] Length = 197 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 KE ++ R+ +GK +++ LRK G +P +YG D P + + R Sbjct: 1 MKEIDVTGQKRENLGKKASKALRKEGFVPCNLYGEKKDENGAPVAFSFAVSFKELRKIIY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ + Sbjct: 61 TPHVYVINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKL--NGLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 119 QGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLELATPKE 177 Query: 179 ITIATI 184 + + +I Sbjct: 178 VVVCSI 183 >gi|317486441|ref|ZP_07945268.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] gi|316922351|gb|EFV43610.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6] Length = 192 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 5/189 (2%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K LS R +GKG+ R R+ IP + Y + P+ +S + +K S+ Sbjct: 1 MSDLKVLSVQKRAGLGKGANRRARQEELIPGVFYTAKGENLPVQMSVRSFAKLF-SQVGR 59 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TT+ L+I G V+ Q DP++ H DF V V + VPV F + G Sbjct: 60 TTVFNLEIEGDGTHPVLIWATQRDPITSRFTHIDFYGVDLDKPVKITVPVEFT--GVARG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K GGKL ++ L+ ++P +T+D++ + +G +I + D++LPE + N Sbjct: 118 TKVGGKLETYREQIQLMAKPLDMPAKVTIDISGMDVGTTIQIADVKLPEGVKAAYDNNYA 177 Query: 181 IATIVAPIS 189 I +++ P Sbjct: 178 IVSVLMPGG 186 >gi|283455970|ref|YP_003360534.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] gi|283102604|gb|ADB09710.1| 50S ribosomal protein L25 [Bifidobacterium dentium Bd1] Length = 198 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 10/185 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR LR IPA +Y P + L K+ + L N Sbjct: 1 MAT-TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G++ I KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFTIKYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 117 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEE 171 Query: 180 TIATI 184 ++ T+ Sbjct: 172 SVVTV 176 >gi|303327047|ref|ZP_07357489.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] gi|302863035|gb|EFL85967.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3] Length = 205 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 6/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---S 57 MD ++ LS R+ GKG + LR IP + Y + + + K Sbjct: 1 MDIEK-TLSVQKREDCGKGPSGRLRSQELIPGVFYTGKGENITVQAPTLPLEKLYEEVGH 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + K V+ Q P H DF V V V VP+ F+ Sbjct: 60 TTVFNLEIDENGQKSTHPVLIWQVQRHPYKKCFTHIDFYGVDLNKEVKVDVPLEFV--GV 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 S G+K GG L V L ++P IT+D++D+ I D+++M D++LP +++ Sbjct: 118 SRGVKLGGVLETYRESVRLSSKPLDMPKKITIDVSDMDINDTVNMADLQLPANVTAVYDQ 177 Query: 178 NITIATIVA 186 N + +++A Sbjct: 178 NFAVVSVLA 186 >gi|15608155|ref|NP_215531.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Rv] gi|15840443|ref|NP_335480.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CDC1551] gi|31792206|ref|NP_854699.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis AF2122/97] gi|121636944|ref|YP_977167.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660797|ref|YP_001282320.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|148822224|ref|YP_001286978.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis F11] gi|167968126|ref|ZP_02550403.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis H37Ra] gi|215402830|ref|ZP_03415011.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|215410617|ref|ZP_03419425.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 94_M4241A] gi|215426293|ref|ZP_03424212.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T92] gi|215429876|ref|ZP_03427795.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis EAS054] gi|215445164|ref|ZP_03431916.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T85] gi|218752686|ref|ZP_03531482.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis GM 1503] gi|219556883|ref|ZP_03535959.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T17] gi|224989416|ref|YP_002644103.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799955|ref|YP_003032956.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|254231309|ref|ZP_04924636.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|254363931|ref|ZP_04979977.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|254550000|ref|ZP_05140447.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185926|ref|ZP_05763400.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis CPHL_A] gi|260200044|ref|ZP_05767535.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis T46] gi|260204233|ref|ZP_05771724.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis K85] gi|289442436|ref|ZP_06432180.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289446596|ref|ZP_06436340.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289555202|ref|ZP_06444412.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289568993|ref|ZP_06449220.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289573655|ref|ZP_06453882.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289744751|ref|ZP_06504129.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289749545|ref|ZP_06508923.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289753076|ref|ZP_06512454.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289757097|ref|ZP_06516475.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|289761151|ref|ZP_06520529.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|294995204|ref|ZP_06800895.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 210] gi|297633541|ref|ZP_06951321.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN 4207] gi|297730526|ref|ZP_06959644.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN R506] gi|298524511|ref|ZP_07011920.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|306775150|ref|ZP_07413487.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|306781935|ref|ZP_07420272.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|306783710|ref|ZP_07422032.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|306788065|ref|ZP_07426387.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|306792398|ref|ZP_07430700.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|306796801|ref|ZP_07435103.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|306802687|ref|ZP_07439355.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|306806866|ref|ZP_07443534.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|306967067|ref|ZP_07479728.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|306971257|ref|ZP_07483918.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|307078986|ref|ZP_07488156.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|307083546|ref|ZP_07492659.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|313657855|ref|ZP_07814735.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis KZN V2475] gi|54039135|sp|P66122|RL25_MYCBO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|54041837|sp|P66121|RL25_MYCTU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|1870013|emb|CAB06864.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium tuberculosis H37Rv] gi|13880614|gb|AAK45294.1| ribosomal L25p family protein [Mycobacterium tuberculosis CDC1551] gi|31617794|emb|CAD93903.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY [Mycobacterium bovis AF2122/97] gi|121492591|emb|CAL71059.1| Probable 50S Ribosomal protein L25 rplY [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600368|gb|EAY59378.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis C] gi|134149445|gb|EBA41490.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis str. Haarlem] gi|148504949|gb|ABQ72758.1| 50S ribosomal protein L25 [Mycobacterium tuberculosis H37Ra] gi|148720751|gb|ABR05376.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis F11] gi|224772529|dbj|BAH25335.1| 50S ribosomal protein L25 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321458|gb|ACT26061.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 1435] gi|289415355|gb|EFD12595.1| LSU ribosomal protein L25, Ctc-form [Mycobacterium tuberculosis T46] gi|289419554|gb|EFD16755.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CPHL_A] gi|289439834|gb|EFD22327.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 605] gi|289538086|gb|EFD42664.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis K85] gi|289542747|gb|EFD46395.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T17] gi|289685279|gb|EFD52767.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium tuberculosis 02_1987] gi|289690132|gb|EFD57561.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis T92] gi|289693663|gb|EFD61092.1| ribosomal L25p family protein [Mycobacterium tuberculosis EAS054] gi|289708657|gb|EFD72673.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis GM 1503] gi|289712661|gb|EFD76673.1| ribosomal L25p family protein [Mycobacterium tuberculosis T85] gi|298494305|gb|EFI29599.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis 94_M4241A] gi|308216300|gb|EFO75699.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu001] gi|308325326|gb|EFP14177.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu002] gi|308331493|gb|EFP20344.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu003] gi|308335299|gb|EFP24150.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu004] gi|308339107|gb|EFP27958.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu005] gi|308342779|gb|EFP31630.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu006] gi|308346688|gb|EFP35539.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu007] gi|308350603|gb|EFP39454.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu008] gi|308355236|gb|EFP44087.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu009] gi|308359191|gb|EFP48042.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu010] gi|308363093|gb|EFP51944.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu011] gi|308366757|gb|EFP55608.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis SUMu012] gi|323720515|gb|EGB29597.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis CDC1551A] gi|326904758|gb|EGE51691.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis W-148] gi|328459698|gb|AEB05121.1| 50S ribosomal protein L25 rplY [Mycobacterium tuberculosis KZN 4207] Length = 215 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 8/191 (4%) Query: 1 MDQK-ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L +R + GKG++R R+ G+IPA++YG+ ++P+ + L D + L + Sbjct: 1 MAKSASNQLRVTVRTETGKGASRRARRAGKIPAVLYGHGAEPQHLELPGHDYAAVLRH-S 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI + + K + P+ + HAD L V G V V V V + Sbjct: 60 GTNAVLTLDIAGKEQLALTKALHIHPIRRTIQHADLLVVRRGEKVVVEVSVVVEGQAGPD 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + + A +IP+ +TV + + G + I LP S +S ++ Sbjct: 120 TL-----VTQETNSIEIEAEALSIPEQLTVSIEGAEPGTQLTAGQIALPAGVSLISDPDL 174 Query: 180 TIATIV-APIS 189 + +V AP + Sbjct: 175 LVVNVVKAPTA 185 >gi|167629342|ref|YP_001679841.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] gi|226736327|sp|B0TBA3|RL25_HELMI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167592082|gb|ABZ83830.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Heliobacterium modesticaldum Ice1] Length = 231 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 4/189 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +L A+ R+K +G + LRK G +PA++YG I+++AK++S L + + Sbjct: 1 MLSGELRAIRREKGSRGYIKELRKRGLLPAVVYGKDKPDMLISVNAKELSGLLKAMGSAS 60 Query: 63 TILTL--DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 IL L + + V+ K+ Q DPV + H DF V V +P+ + G Sbjct: 61 AILDLQVEGSDDRHKVMLKEMQRDPVGRMPNHVDFQLVDWNKPVHAEIPIHLVGTPA--G 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG + V + +P +D++ L++ D + + DI P + +S+ + Sbjct: 119 VKAGGIIQHGLRTVEVEGLPGKLPPRFDIDISHLELHDKMTVADITSPAGIAIISEPDQV 178 Query: 181 IATIVAPIS 189 I +I+ P + Sbjct: 179 ILSIIVPRA 187 >gi|187251696|ref|YP_001876178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] gi|254801048|sp|B2KE95|RL25_ELUMP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186971856|gb|ACC98841.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Elusimicrobium minutum Pei191] Length = 219 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 4/187 (2%) Query: 3 QKECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 +E K++ +R+K G KG +R ++PA+IYG +P ++++ KD+ L Sbjct: 1 MEEIKVNVELREKAGVKGVLSAIRAEKKVPAVIYGGQKEPISVSITEKDLKAILK--AGS 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++TL I K+ Q V D H DF ++S + V VP++ E+ I Sbjct: 59 NSVVTLSTPAGKETAIIKEVQYHVVKDTPNHVDFQRISLKEKIDVVVPLKLTGESADVKI 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 N V EV++ IP I VD++ L I +IH+ D+ L + + I Sbjct: 119 YGALI-NQVLREVAIRALPTAIPHEIAVDISALTIHKAIHISDLSLSKDIEVLGDPERAI 177 Query: 182 ATIVAPI 188 ++ P Sbjct: 178 VHLMVPR 184 >gi|282865453|ref|ZP_06274504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] gi|282559497|gb|EFB65048.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces sp. ACTE] Length = 194 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ +R + GKG+AR +R+ Q+P ++YG+ ++P + L D+ L + N Sbjct: 1 MAEIKLATEVRTEFGKGAARRIRRANQVPGVVYGHGAEPVHVTLPGHDLLLALRTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+I + VIPK Q + + + H D L V G V V V V + Sbjct: 58 VLIGLEIDGKDALVIPKAVQRNAIKGDIEHVDLLTVKRGEKVNVEVAVHAEGDLAPGA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 L V + + + A +IP+S+TV + L G S+ +DI LP + Sbjct: 116 --NLLEFVMNTLLVEAEATHIPESVTVSVAGLDAGASVLAKDIPLPSGSVLAEDPE 169 >gi|257057204|ref|YP_003135036.1| 50S ribosomal protein L25P [Saccharomonospora viridis DSM 43017] gi|256587076|gb|ACU98209.1| LSU ribosomal protein L25P [Saccharomonospora viridis DSM 43017] Length = 212 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 13/196 (6%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+ R + GKG+AR R+ G+IPA++YG SDP+ +AL A + ++ L ++ Sbjct: 1 MSEVRLTVEPRTEFGKGAARRTRRAGKIPAVLYGPGSDPRHLALPAIEFARVLR-EHGQN 59 Query: 63 TILTLDIGKE------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 T++TLDI +P+ + P+ + + H D L V G V V VPV ++ Sbjct: 60 TVITLDIDSNGNGEKASEMALPRAVAVHPLKNYIEHVDLLIVKRGEKVVVDVPVVLTGQS 119 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + + + + A ++PD + V + G I + LP +S Sbjct: 120 GPGTL-----VTQELDAIQVQAEALSLPDQLEVSVEGATAGTQITAAQVALPAGAELVSD 174 Query: 177 LNITIATIV-APISGS 191 + IA + AP + Sbjct: 175 PELLIAVVSEAPSEAA 190 >gi|194334300|ref|YP_002016160.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris aestuarii DSM 271] gi|226736350|sp|B4S8X6|RL25_PROA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194312118|gb|ACF46513.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prosthecochloris aestuarii DSM 271] Length = 201 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+ R K A+ LR G++PA++Y N D + I ++ + K ++S Sbjct: 1 METIVLAVEPRT-CSKNEAKTLRTEGKVPAVVYHNGEDNQHICVNELALEKLVHSPESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK + KD Q DPV+D +IHADF S G + + VPV F K PGI+ Sbjct: 60 INLEFPDGKN-RRSLIKDVQFDPVTDKVIHADFQFFSAGEVLEMEVPVTFT--GKGPGIE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEK-TSSMSQLNI 179 GG+L + H +++ ++IPD IT+D++ +++G+++H+++I + + + Sbjct: 117 AGGRLQALVHALTVKGVPSSIPDHITLDISAMELGETMHIKEIPAEIAAGKFEFVGEPET 176 Query: 180 TIATIVAPI 188 + +I AP Sbjct: 177 PVVSITAPR 185 >gi|212696420|ref|ZP_03304548.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] gi|212676592|gb|EEB36199.1| hypothetical protein ANHYDRO_00958 [Anaerococcus hydrogenalis DSM 7454] Length = 214 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L + R+ VGK LR+ +P ++YG + + +++D K S+ + Sbjct: 1 MADIVLKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKV-LSQAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+ LD+ E V V+ KDYQ+ P H DF ++ + V VPV + Sbjct: 60 TIIDLDLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIR--V 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNIT 180 + L V + C IP V + +++IGD+ + D+ + E + + + + Sbjct: 118 EPSVLVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFTVADLDIAKDENINILLEDDEV 177 Query: 181 IATIVAP 187 + ++ P Sbjct: 178 VCSLQEP 184 >gi|315645850|ref|ZP_07898971.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315278611|gb|EFU41925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 208 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 98/190 (51%), Gaps = 6/190 (3%) Query: 1 MDQ-KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + +L A +R++ + S R+LR+NG IP ++YG + P+A+ KD SK ++ Sbjct: 1 MSKGNNVQLKADVRNEFTRASRRVLRENGGIPGVVYGAGEESIPVAVDFKDTSKLFHTGR 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 L + G + V+ KD Q + H DFL++S V V + V F + + Sbjct: 61 SEVFQLDIP-GSGKIPVLIKDIQKR--RGNVSHVDFLRISMNKPVRVSIGVDF--QGTAV 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K GG L + + + ++P ++ VD++ L+IGD + + DI++P+ + + Sbjct: 116 GTKSGGILQTQLNAIDVEGLPGDLPSTLEVDVSALEIGDKLTVADIKVPKGITLHASEEE 175 Query: 180 TIATIVAPIS 189 +A+++ P + Sbjct: 176 VLASVIVPRA 185 >gi|94987179|ref|YP_595112.1| 50S ribosomal protein L25/general stress protein Ctc [Lawsonia intracellularis PHE/MN1-00] gi|166223692|sp|Q1MQD6|RL25_LAWIP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94731428|emb|CAJ54791.1| ribosomal protein L25 (general stress protein Ctc) [Lawsonia intracellularis PHE/MN1-00] Length = 197 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 5/186 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---SKNFMTT 63 L R +GKG R L K IP I Y + PI L +K Sbjct: 6 TLVVQKRLDLGKGPNRRLHKKNLIPGIFYTSSGKNIPIQLPELPFTKIFSEVGRTTVFNL 65 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + D VI + Q PV + +H D V + + VP+ F K G K Sbjct: 66 KIESDKENITHPVIIWELQYYPVKNRFMHVDLYGVELNKPIKIVVPLEFTGTAK--GTKV 123 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GGKL +++L+ +IP IT+D++DL IG SI++ D++LPE + N I + Sbjct: 124 GGKLETYREQLTLIANPLDIPSKITLDISDLDIGKSIYVADLKLPEGVKTSYDTNYAIVS 183 Query: 184 IVAPIS 189 ++ P Sbjct: 184 VIMPGG 189 >gi|310287383|ref|YP_003938641.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] gi|309251319|gb|ADO53067.1| LSU ribosomal protein L25P [Bifidobacterium bifidum S17] Length = 208 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N Sbjct: 1 MAN-TIKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFSISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + V E+ + N+P+ I V+++ L G + ++D+ LPE M Sbjct: 117 V-----AFVDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPEGAELDMDDPET 171 Query: 180 TIATIVAP 187 ++ ++ P Sbjct: 172 SVVSVEVP 179 >gi|255020869|ref|ZP_05292925.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] gi|254969660|gb|EET27166.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756] Length = 209 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A RD G+ +R LR+ GQ+PA++YG+ P++L A+ + K L + Sbjct: 1 MTDVQFSIPARERDGHGRRPSRRLRREGQVPAVLYGDGKPANPLSLEARVLRKLLADERV 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T ++TL+ + +D Q+ P + ++H DFL+V G VT+HVP+ F NE G Sbjct: 61 FTNVITLEFPDRKETALIRDLQMHPYKEEVLHVDFLRVHAGERVTLHVPIHFENEATCVG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQL 177 +K GG L+ EV + P +P++I VD+ L++G+SIH+ I +P + Sbjct: 121 VKSGGVLHRALVEVEVEAPVGQLPEAIVVDIAQLQVGESIHLSQITVPAGVKLVPLSHDD 180 Query: 178 NITIATIVAPISGS 191 + + ++ + +G+ Sbjct: 181 DKEVVSVHSARTGA 194 >gi|224282940|ref|ZP_03646262.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|311064224|ref|YP_003970949.1| 50S ribosomal protein L25P RplY [Bifidobacterium bifidum PRL2010] gi|313140099|ref|ZP_07802292.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] gi|310866543|gb|ADP35912.1| RplY LSU ribosomal protein L25P [Bifidobacterium bifidum PRL2010] gi|313132609|gb|EFR50226.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] Length = 208 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K++ +RD+ GKG+AR +R IPA +Y P + L K+ + L N Sbjct: 1 MAN-TIKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTN- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ G + + KD Q +PV I+ H DF +V G + V VPV K Sbjct: 59 --ALFSISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAA 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + V E+ + N+P+ I V+++ L G + ++D+ LPE M Sbjct: 117 V-----AFVDLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPEGAELDMDDPET 171 Query: 180 TIATIVAP 187 ++ ++ P Sbjct: 172 SVVSVEVP 179 >gi|157690834|ref|YP_001485296.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pumilus SAFR-032] gi|166987890|sp|A8F919|RL25_BACP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157679592|gb|ABV60736.1| stress induced RNA binding ribosomal protein L25p family [Bacillus pumilus SAFR-032] Length = 208 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+T Sbjct: 3 TLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ + Q DP+ + L+HADF V + VPV+ I E+K G+K GG Sbjct: 62 LDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGESK--GVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L E+S+ +IP I D+ +L++ D + + D+ + + +A+I+ Sbjct: 120 LQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLPVQSSYQVNNDPEEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|88801937|ref|ZP_01117465.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] gi|88782595|gb|EAR13772.1| putative ribosomal L25p family stress protein [Polaribacter irgensii 23-P] Length = 199 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P +IYG + SA++++ + Sbjct: 1 MKSITIKGSKRESVGKVATKALRNAGMVPCVIYGGGK---LVHFSAEELAFKKLVYTPNV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ + + + I KD Q PV+D +IHADF Q+ E +T+ +PV SPG+ Sbjct: 58 YTATIIVDGQSIQTILKDIQFHPVTDRIIHADFYQLFEDKEITMRIPVNLT--GTSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD + +++ L+IG + + + + + M N + Sbjct: 116 NGGSLRFTNRKLKVKALPANLPDFVNANISALRIGGKLTVASLTT-DGYTFMHPDNTVVV 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|312138688|ref|YP_004006024.1| 50S ribosomal protein l25 rply [Rhodococcus equi 103S] gi|325676243|ref|ZP_08155922.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] gi|311888027|emb|CBH47339.1| 50S ribosomal protein L25 RplY [Rhodococcus equi 103S] gi|325552804|gb|EGD22487.1| ribosomal L25p family protein [Rhodococcus equi ATCC 33707] Length = 197 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL A +R + GKG+AR R++GQ+PA++YG+ +DP+ + L A++ + L + ++ Sbjct: 6 KLVASVRSEFGKGAARRARRDGQVPAVLYGHGTDPQHLNLPAREFAAILR-AHGTNVVIN 64 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + + K + P+ + HAD L V +G V V VP+ + Sbjct: 65 LDIDGKDQLALTKSVVVHPIRRHIEHADLLIVQKGEKVAVEVPIVVTGTAAPGALVTEE- 123 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + L A +IP+S+ + + ++G + LP+ + + + +V Sbjct: 124 ----TTTIKLEVDALDIPESVEISVEGAEVGTQFLAGAVALPKGATLADDAELLLVNVV 178 >gi|300858120|ref|YP_003783103.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|300685574|gb|ADK28496.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis FRC41] gi|302205841|gb|ADL10183.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis C231] gi|302330399|gb|ADL20593.1| 50S ribosomal protein L25/ general stress protein Ctc [Corynebacterium pseudotuberculosis 1002] gi|308276076|gb|ADO25975.1| 50S ribosomal protein L25 [Corynebacterium pseudotuberculosis I19] Length = 205 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 8/185 (4%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNF 60 +SA R + GKG AR LR GQ+P +IYG + P ++ ++ L + Sbjct: 1 MATYPTISAQPRTEFGKGFARRLRAAGQVPGVIYGADIESPIHFSVDILELHALLR-AHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L LDI E + K + ++ H D L + G V V VPV E Sbjct: 60 SNAVLDLDIEGEKHLTMVKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVALQGETAPGT 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 L V + +IP+ I + L++ + D+ LP T+ ++ Sbjct: 120 T-----LIQDADTVLVEADVLSIPEEIAFSVEGLEVDAKVLAGDLSLPANTTLVADPEFV 174 Query: 181 IATIV 185 IAT+ Sbjct: 175 IATVS 179 >gi|311740785|ref|ZP_07714612.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304305|gb|EFQ80381.1| 50S ribosomal protein L25 [Corynebacterium pseudogenitalium ATCC 33035] Length = 215 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R + GKG AR LR+ ++P +IYG+ +P A+ DI + N + +L L Sbjct: 7 IKAEARTEFGKGVARRLRREWKVPGVIYGSHQEPVHFAVPLLDIQSLVR-NNGVNAVLEL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I E + K + ++ + H D L + G V V VPV E G Sbjct: 66 EIDGEQYLTMVKHVDQNVLTFDIDHVDLLAIKRGEKVEVEVPVTLTGEPA-----AGTMH 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + NIP+ I V + L+ G I D+ +PE T+ +++ + I +I P Sbjct: 121 IQDADVLLVEADVLNIPEEIEVSIEGLEDGAVITAADVTMPEDTTLVAEEDTVIVSISLP 180 >gi|145222529|ref|YP_001133207.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium gilvum PYR-GCK] gi|315442977|ref|YP_004075856.1| 50S ribosomal protein L25P [Mycobacterium sp. Spyr1] gi|145215015|gb|ABP44419.1| LSU ribosomal protein L25P [Mycobacterium gilvum PYR-GCK] gi|315261280|gb|ADT98021.1| LSU ribosomal protein L25P [Mycobacterium sp. Spyr1] Length = 223 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 6/180 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A +R GKG++R R+ G++P ++YG+ +DP+ + L +D + L +LT Sbjct: 8 NLTAQVRSTTGKGASRRARREGRVPVVLYGHGTDPQHLELDGRDFAAVLRH-AGTNAVLT 66 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LDI + K ++ P+ + HAD L V +G VTV V V E + Sbjct: 67 LDIDGTEQLALTKAIEIHPIRRNIQHADLLVVRKGEKVTVEVTVIVEGEAAPGTL----- 121 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 + + V + +IP+ TV + + G I I LP + ++ + +VA Sbjct: 122 VTQDANVVEIEADVQSIPEQFTVSVEGAEEGTQILAGQIELPSGVTLIADPETLVVNVVA 181 >gi|194017996|ref|ZP_03056603.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] gi|194010333|gb|EDW19908.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061] Length = 208 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + + + +R +G +P +IYG +D ++L + D+ K L + TI+T Sbjct: 3 TLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ + Q DP+ + L+HADF V + VPV+ I E+K G+K GG Sbjct: 62 LDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGESK--GVKDGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L E+S+ +IP I D+ +L++ D + + D+ + + +A+I+ Sbjct: 120 LQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLSVQSSYQVNNDPEEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|305665462|ref|YP_003861749.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] gi|88710218|gb|EAR02450.1| putative ribosomal L25p family stress protein [Maribacter sp. HTCC2170] Length = 219 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 5/186 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G++P ++YG P + + +Y+ N T Sbjct: 1 MKSITIKGSERESVGKKATKALRNAGKVPCVVYGGEK-PLHFSANELAFKNLVYTANAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+ G V+ + +D Q PV+D +IH DF Q+ + VT+++PVR SPG++ Sbjct: 60 VVVELENGD-KVNAVMQDIQFHPVTDKIIHIDFYQLFKDKEVTMNIPVRLE--GNSPGVR 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L ++++ N+ D VD++ LKIGD+I +E + L S + + + Sbjct: 117 NGGRLLFRKRKLTIKAFPENLIDFFKVDISTLKIGDNISVESL-LSNDFSILHPDSTVVV 175 Query: 183 TIVAPI 188 + Sbjct: 176 QVKTAR 181 >gi|111022660|ref|YP_705632.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus jostii RHA1] gi|122955279|sp|Q0S4R2|RL25_RHOSR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110822190|gb|ABG97474.1| 50S ribosomal protein L25 [Rhodococcus jostii RHA1] Length = 207 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 8/191 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L A +R + GKG+AR R++GQ+PA++YG+ DP+ + + ++D + L + Sbjct: 1 MSDEN-RLVAAVRTEFGKGAARRARRDGQVPAVLYGHGEDPRHLNVPSRDFAAILR-AHG 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTLDI + + K + P+ + + HAD L + +G VTV VPV E + Sbjct: 59 TNAILTLDIEGKEQVALTKSVVVHPIRNYIEHADLLVIKKGEKVTVDVPVVVTGEAAAGT 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +SL A +IP+ I V + L++G I + LP+ ++ + + Sbjct: 119 L-----VAQDAATISLEADALHIPEQIEVSVEGLEVGTQILANQLELPKGSTLQADEELL 173 Query: 181 IATIV-APISG 190 I +V AP + Sbjct: 174 IVNVVAAPTAA 184 >gi|311070699|ref|YP_003975622.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] gi|310871216|gb|ADP34691.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus atrophaeus 1942] Length = 205 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + S R +R +G +P IIYG + P++L + ++ K L + TI+T Sbjct: 3 TLKAKERTDFKRSSLRKIRTSGHVPGIIYGKETTNTPVSLDSIELIKTLRDE-GKNTIIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +DI + V+ + Q DP+ + + HADF V+ + V VP+ +S G+K+GG Sbjct: 62 IDIDGKKHAVMVSELQTDPLKNEVTHADFQVVNMSEDIEVDVPIHLT--GESVGVKEGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L +E+S+ IP SI D++ L I D + + D+ + S + + +A+I+ Sbjct: 120 LQQPLYELSVKAKPKAIPQSIEADISGLDINDVLTIADLSADGEYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|189218769|ref|YP_001939410.1| ribosomal protein L25 [Methylacidiphilum infernorum V4] gi|189185627|gb|ACD82812.1| Ribosomal protein L25 [Methylacidiphilum infernorum V4] Length = 219 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 7/193 (3%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L A +R VGK + + LR IPAI+YG + P+ +SA + + K Sbjct: 1 MAQPITLRASIRKAVGKSAVKKLRSKDNIPAILYGKKT-LLPLEISATEFKNLFHGKRVE 59 Query: 62 TTILTLDI----GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +L L+I K+ ++ QL P++D L+H D ++S V + + F+ Sbjct: 60 KVLLNLEIAADQEKKSTLAFLQEIQLHPITDKLLHLDLHELSADEKVHAEIDLVFLG-EP 118 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 L++ + + C ++PDSI V++ LK G+SIH+ DI LP SM+ Sbjct: 119 QSLKSGTANLDISLRRLKISCFPKDLPDSIQVEIGHLKTGESIHVGDIPLPPGVESMNPK 178 Query: 178 NITIATIVAPISG 190 N + ++VA G Sbjct: 179 NQVVLSLVAAKGG 191 >gi|94971565|ref|YP_593613.1| 50S ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] gi|94553615|gb|ABF43539.1| LSU ribosomal protein L25P [Candidatus Koribacter versatilis Ellin345] Length = 233 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 1/185 (0%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M E ++A R GK AR +RK G +PA +YG DP + + K +SK L S+ Sbjct: 1 MAITENTVTAQSRKAGGKNDARRVRKTGMVPAAVYGAGKDPVAVTVDPKAVSKILRSETG 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TI L + V+ D+Q +P+ L+H D +++ + V VPV + Sbjct: 61 HNTIFDLAVNGGAEKVMIVDWQYEPLKGKLLHVDLKRIAMDKVLRVSVPVILQGTAEGV- 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +GG L + EV + C +IP +I D+ LK GD++ ++D+ +K ++ + Sbjct: 120 KNEGGILEQLIREVEIECLPADIPRAIFADVTPLKHGDNLRVKDLAHGDKLKFITDEDQM 179 Query: 181 IATIV 185 +A + Sbjct: 180 VAHVT 184 >gi|227504123|ref|ZP_03934172.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] gi|227199280|gb|EEI79328.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium striatum ATCC 6940] Length = 211 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R++ GKG AR LR G++P ++YG+ D A+ +++ + + Sbjct: 1 MANTRPVLKAEVRNEFGKGFARRLRVAGKVPGVVYGHAVDVLHFAVDRIELTALVR-AHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L++ E V+ K + ++ + H D L + G V V VPV E Sbjct: 60 VNAVFELELEGEQHLVMVKHVDQNVLTLDIDHIDLLSIKRGEKVEVEVPVTLEGEPAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + NIP+ I+V + L+ G + DI LPE T+ ++ Sbjct: 118 ---GLMFIQDADVLLVEADVLNIPEEISVSIEGLEDGAVVTAGDITLPEDTTLVADAETI 174 Query: 181 IATIVAP 187 IA+I P Sbjct: 175 IASISLP 181 >gi|15827041|ref|NP_301304.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae TN] gi|221229519|ref|YP_002502935.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium leprae Br4923] gi|13633840|sp|Q9CD48|RL25_MYCLE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13092588|emb|CAC29753.1| putative 50S ribosomal protein L25 [Mycobacterium leprae] gi|219932626|emb|CAR70338.1| putative 50S ribosomal protein L25 [Mycobacterium leprae Br4923] Length = 215 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 8/189 (4%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + KLS +R GKG++R R++G++PA++YG+ +P+ + L A S L Sbjct: 1 MAKSTVNKLSVSVRTNTGKGASRRARRDGKVPAVLYGHGEEPQHLELPAHAFSAVLRHV- 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTL++ + + K + P+ ++HAD L V G + V VPV + Sbjct: 60 GTNAVLTLEVAGKEQLALTKAIDVHPIRHTIMHADLLVVRSGEKIVVEVPVEVEGDAGPD 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + A +IP+ +T+ + + G I LP + +S + Sbjct: 120 IL-----VTQETTSIEIEAEALSIPEQLTMSIEGAEPGTQFTARQIPLPVGVTLVSDPEM 174 Query: 180 TIATIV-AP 187 + +V AP Sbjct: 175 LVVNVVNAP 183 >gi|46579985|ref|YP_010793.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris str. Hildenborough] gi|120602603|ref|YP_967003.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio vulgaris DP4] gi|71153142|sp|Q72BR0|RL25_DESVH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223678|sp|A1VDR0|RL25_DESVV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46449401|gb|AAS96052.1| ribosomal protein L25 [Desulfovibrio vulgaris str. Hildenborough] gi|120562832|gb|ABM28576.1| LSU ribosomal protein L25P [Desulfovibrio vulgaris DP4] gi|311234017|gb|ADP86871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio vulgaris RCH1] Length = 190 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 6/192 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY---S 57 M ++ LS RD +GKG+ R LR +P + Y + + + AK + K Sbjct: 1 MS-EQKTLSVQKRDNLGKGANRRLRSEEVVPGVFYDTKGNNVAVQMPAKPLQKLFEEVGR 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + K V+ D P H DF V + + VP+ F+ Sbjct: 60 TTVFQLEIEEEGKKSTHPVLIWDALFHPYKKKFTHIDFFGVDLDREIKIRVPLEFV--GT 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 S G+K GGKL V + ++ +P IT+DL +L I +I ++D+ +PE + Sbjct: 118 SRGVKLGGKLEVYREFIDVMSKPLTLPKKITLDLTELDINSTIMLKDVAMPEGVRPATNE 177 Query: 178 NITIATIVAPIS 189 N I +++ P S Sbjct: 178 NFAILSVLTPKS 189 >gi|42526848|ref|NP_971946.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema denticola ATCC 35405] gi|71153672|sp|Q73N16|RL25_TREDE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|41817163|gb|AAS11857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Treponema denticola ATCC 35405] Length = 211 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+A R GK +A +RK G+IPA++Y PI + ++ K + Sbjct: 1 MEQRLLNANERSTYGKNAAVKMRKAGRIPAVMYDRHGKSVPIDVDEREFMKLFKLVT-ES 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TL+ + V KD+Q D VSD + H DF +V G T+ V +R G++ Sbjct: 60 TIVTLNAAGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRLE--GSPEGVR 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L E+ L C ++P I VD++ L + S+H+ DI+LPE + ++ +IT+A Sbjct: 118 HGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVLTSDDITVA 177 Query: 183 TI 184 I Sbjct: 178 AI 179 >gi|288926807|ref|ZP_06420716.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] gi|288336436|gb|EFC74813.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17] Length = 201 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE ++ R +GK ++RLLRK G +P +YG P ++ ++ R Sbjct: 1 MKEINVTGQKRTDLGKKASRLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + + Sbjct: 61 PHIYVINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + + Sbjct: 119 GVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLDIATSKEV 177 Query: 180 TIATIVAPISG 190 + +I + Sbjct: 178 VVCSIKMTRAA 188 >gi|15612630|ref|NP_240933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus halodurans C-125] gi|68053238|sp|Q9KGJ4|RL25_BACHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|10172679|dbj|BAB03786.1| 50S ribosomal protein L25 [Bacillus halodurans C-125] Length = 215 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 5/187 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + R +RK G +PA++YGN + +PI++ A D K + Sbjct: 1 MAMS---LKAEKRPDLRGSVTRKIRKQGYVPAVVYGNKTKSQPISVEAVDFLKTVREVGR 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I V+ D Q+DP+ +H DF +V S + +VPVR ++ G Sbjct: 58 NGLISLEVEKGTKHQVMVHDLQMDPLKGDYLHIDFFEVDMSSEIEANVPVRLT--GEARG 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + +GG L+ + +E+++ +IP+ IT+D++ L IGDSI + D+R +++ T Sbjct: 116 VSEGGVLSQLMYEITVRSLPADIPEEITLDVSSLAIGDSIQIRDVRGNVPVQVVNEDEET 175 Query: 181 IATIVAP 187 + T+ P Sbjct: 176 VVTVQPP 182 >gi|282879731|ref|ZP_06288461.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] gi|281306400|gb|EFA98430.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1] Length = 216 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 98/192 (51%), Gaps = 6/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYSKN 59 KE +S R+ +GK +++ LRK G +P +YG + P +A +A R Sbjct: 1 MKEINVSGQKREDLGKKASKHLRKEGLVPCNLYGEQKEDGKPVALAFAAPMSELRKIVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L+I E I K+ Q PV+D L+H DF V++ +T+ +PV+ + + Sbjct: 61 PHIYVINLNIDGEHHTAILKELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ L+IG SI + + + + + ++ Sbjct: 119 GVRDGGRMNLSVRKINVTAPYQQIPEHLDIDVTKLRIGKSIKVGQLSF-DGLTMATSKDV 177 Query: 180 TIATIVAPISGS 191 + +I S + Sbjct: 178 VVCSIKMTRSAT 189 >gi|306822823|ref|ZP_07456199.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] gi|304553455|gb|EFM41366.1| 50S ribosomal protein L25 [Bifidobacterium dentium ATCC 27679] Length = 212 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR LR IPA +Y P + L K+ + L N Sbjct: 15 MAT-TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN- 72 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G + I KD Q +PV I+ H DF +V G + V VPV K Sbjct: 73 --ALFTIKYGDQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 130 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 131 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEE 185 Query: 180 TIATI 184 ++ T+ Sbjct: 186 SVVTV 190 >gi|186681114|ref|YP_001864310.1| 50S ribosomal protein L25/general stress protein Ctc [Nostoc punctiforme PCC 73102] gi|226736342|sp|B2J8B8|RL25_NOSP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|186463566|gb|ACC79367.1| transcriptional regulator, Fis family [Nostoc punctiforme PCC 73102] Length = 199 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + ++ R + K R LR++G IPA +YG+ ++ + + AK + + L + T Sbjct: 2 TITVESLKRPEGSK--PRALRRSGLIPANLYGHKGTESISLTIEAKTVERLLKRVSVNNT 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L+I ++ Q+ P H F V+ TV V +RF+ Sbjct: 60 LIELNIADAPWRGKALLRELQIHPAKGTPYHLSFFAVAGHGDTTVEVRLRFVGTAVGV-K 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG L+ V E+ + C NIPD I +D+ +L+IGDS+ + DI PE + +++L + Sbjct: 119 QEGGVLDTVITELQVSCAPENIPDVIEIDVTNLQIGDSLSISDIPFPEGVTPLAELERLV 178 Query: 182 ATIVAP 187 +++ P Sbjct: 179 VSVLPP 184 >gi|283780445|ref|YP_003371200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] gi|283438898|gb|ADB17340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula staleyi DSM 6068] Length = 208 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L+ RDK+G + R LR G++PA++YG+ + +++++I + + Sbjct: 1 MSAETLNVTKRDKLGTANNRRLRYTGKVPAVLYGHGEASISLTVASEEIWAAVKHGGKLV 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + G + + Q D S +IH D ++VS V+ + V + G+ Sbjct: 61 NLK----GDVTESALIRAVQWDVWSKEIIHIDLMRVSASEKVSTTIAVELK--GTAAGLT 114 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + HE+ +LCPA IP+ + V++N+L +G +IH ++ LP+ ++ ++ + Sbjct: 115 EGGVLQFITHELEILCPAAEIPEKLIVNVNNLHLGKAIHANEVTLPKDGELVTPGSVVVV 174 Query: 183 TIVAPI 188 + VAP Sbjct: 175 SCVAPK 180 >gi|171743014|ref|ZP_02918821.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] gi|171278628|gb|EDT46289.1| hypothetical protein BIFDEN_02139 [Bifidobacterium dentium ATCC 27678] Length = 212 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 10/185 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L R + GKG+AR LR IPA +Y P + L K+ + L N Sbjct: 15 MAT-TITLEGAARTEFGKGAARRLRVAKLIPATVYAGGEAPVFVQLPMKETTLSLRHTN- 72 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T+ G++ I KD Q +PV I+ H DF +V G + V VPV K Sbjct: 73 --ALFTIKYGEQTKMAIVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAA 130 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 + E+ + N+P+ I V+++ L G + +D+ LPE + Sbjct: 131 VAFVDI-----QELKVRADVANLPEKIVVNVDGLTDGAKVFAKDVVLPEGVVLDVEDPEE 185 Query: 180 TIATI 184 ++ T+ Sbjct: 186 SVVTV 190 >gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc [Halorhodospira halophila SL1] gi|166223688|sp|A1WVQ2|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1] Length = 209 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 5/192 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G+G+ R LR+ ++P ++YG +P+P+AL + + L + F Sbjct: 1 MTVEMRLDAHPRTETGRGAMRRLRRARRVPGVVYGAGKEPQPVALENDQLYRLLEEEAFF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +TIL + +G E I KD Q P ++ H D +V E +TVHVP+ E +SPG+ Sbjct: 61 STILKVQMGSETEQAIVKDLQRHPFKPLVQHIDLQRVREDQPITVHVPLHVHGEEQSPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-----Q 176 K+GG L+ ++ ++C ++P I VD++ LK+G ++H+ ++ LPE S + + Sbjct: 121 KKGGVLHHDLLDLEVVCLPKDLPPFIDVDVSSLKVGQAVHISELTLPEGVQSAALQQGEE 180 Query: 177 LNITIATIVAPI 188 + + ++ A Sbjct: 181 YDAPVVSVQATR 192 >gi|317502723|ref|ZP_07960834.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] gi|315666167|gb|EFV05723.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606] Length = 204 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 93/188 (49%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS------DPKPIALSAKDISKRLY 56 KE ++ R +GK +++ LRK G IP +YG + ++ ++ K +Y Sbjct: 1 MKEINVAGQKRTDLGKKASKELRKQGFIPCNLYGEKKNADGKPEAHAFTIAFSELRKIIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + L ++ I K+ Q PV+D +H DF +V++ + + +PV+ Sbjct: 61 TPHIYVINLNIEGEHHT--AILKEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLT--G 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + Sbjct: 117 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLEITTS 175 Query: 177 LNITIATI 184 ++ + ++ Sbjct: 176 KDVVVCSV 183 >gi|121593316|ref|YP_985212.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax sp. JS42] gi|222110037|ref|YP_002552301.1| 50S ribosomal protein l25/general stress protein ctc [Acidovorax ebreus TPSY] gi|166223657|sp|A1W4G1|RL25_ACISJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801044|sp|B9ME47|RL25_DIAST RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|120605396|gb|ABM41136.1| LSU ribosomal protein L25P [Acidovorax sp. JS42] gi|221729481|gb|ACM32301.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax ebreus TPSY] Length = 208 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG ++P+ I + + L + F ++IL Sbjct: 1 MQFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D Q P ++H DF +V E + V + VP+ F S +K +G Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEG 120 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C +P+ I VDL+ L ++ ++ ++LP ++ S N + Sbjct: 121 CTVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLPHGVKAVVRGSNKNPAL 180 Query: 182 ATIVAP 187 +I P Sbjct: 181 VSIKLP 186 >gi|298530961|ref|ZP_07018362.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] gi|298508984|gb|EFI32889.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfonatronospira thiodismutans ASO3-1] Length = 216 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 6/189 (3%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---K 58 E L +R++ GK +AR LRKN +P + Y + + P+ + K Sbjct: 1 MSELYNLKVEVRNEKGKSAARKLRKNDYVPGVYYDSSGETLPLKVRNGPFYKAWNQVGTT 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 N + T + P + +H DF V VT+ VPV K Sbjct: 61 NVVELEYTHSGETHRKPCLIWSIDRHPYKKVYMHVDFYGVDLTKEVTIAVPVEVKGTPK- 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G + GG + + + L C NIP +T+D++ L IGD+I++ED+++P + N Sbjct: 120 -GAEDGGIMRIFRQTLDLTCLPANIPSQVTIDVSKLDIGDNIYIEDLKMPAGAKVTFEEN 178 Query: 179 ITIATIVAP 187 + +V P Sbjct: 179 FAVVGLVPP 187 >gi|302542981|ref|ZP_07295323.1| ribosomal protein L25, Ctc-form [Streptomyces hygroscopicus ATCC 53653] gi|302460599|gb|EFL23692.1| ribosomal protein L25, Ctc-form [Streptomyces himastatinicus ATCC 53653] Length = 199 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+ A R + GKG+AR R ++P ++YG+ ++P + L A D+ L + N Sbjct: 1 MAEVKIPAKPRTEFGKGAARRTRMADRVPGVVYGHGAEPLHVTLPAYDLLMALKTPN--- 57 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L L++ G + VIPK Q P+ IL H D L VS+G VTV +P+ + Sbjct: 58 VLLRLEVEGGKSELVIPKAVQRHPIKIGILEHVDLLLVSKGEKVTVELPINVEGDLAPGA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 L V + + + A +IP+ +T+ + L GD+++ +DI LP+ T+ + + Sbjct: 118 ----NLLEYVLNTLPVETEATHIPEGVTISIAGLDAGDTVYAKDISLPKGTTLAVEDDAP 173 Query: 181 IATIVAP 187 + IV P Sbjct: 174 VLHIVTP 180 >gi|239825631|ref|YP_002948255.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus sp. WCH70] gi|259646689|sp|C5D373|RL25_GEOSW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239805924|gb|ACS22989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus sp. WCH70] Length = 210 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + R +R G IP I+YG D + I +S + K + + +++ Sbjct: 3 VVLEAKERPDKKHSTLRRIRLQGNIPGILYGKNIDNQMIFVSGAALEKTIR-EGGRHSLM 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL IG++ V+ ++ Q DP+ ++HADF V + V + V VR I ++ G K GG Sbjct: 62 TLKIGEKDYSVLLREIQRDPLRGNILHADFQAVDMSTEVDIDVDVRLI--GEAAGEKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H++++ NIP SI +D++ L+IGD++ + DI K + + IATI+ Sbjct: 120 VLQQNLHQLTIRVLPANIPPSIDIDISHLQIGDTVTVGDINTGGKYEIIDDPSEVIATIL 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|16799320|ref|NP_469588.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria innocua Clip11262] gi|71153149|sp|Q92F64|RL25_LISIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16412672|emb|CAC95476.1| ctc [Listeria innocua Clip11262] gi|117957151|gb|ABK59047.1| Ctc [Listeria innocua] gi|117957159|gb|ABK59054.1| Ctc [Listeria innocua] gi|118723078|gb|ABL10242.1| general stress protein [Listeria innocua] gi|118723086|gb|ABL10249.1| general stress protein [Listeria innocua] gi|118723094|gb|ABL10256.1| general stress protein [Listeria innocua] gi|118723102|gb|ABL10263.1| general stress protein [Listeria innocua] gi|118723110|gb|ABL10270.1| general stress protein [Listeria innocua] gi|118723118|gb|ABL10277.1| general stress protein [Listeria innocua] gi|118723126|gb|ABL10284.1| general stress protein [Listeria innocua] gi|313621020|gb|EFR92141.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378] gi|313625452|gb|EFR95201.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023] Length = 207 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|313206746|ref|YP_004045923.1| LSU ribosomal protein l25p [Riemerella anatipestifer DSM 15868] gi|312446062|gb|ADQ82417.1| LSU ribosomal protein L25P [Riemerella anatipestifer DSM 15868] gi|315023817|gb|EFT36819.1| 50S ribosomal protein L25/general stress protein Ctc [Riemerella anatipestifer RA-YM] gi|325335815|gb|ADZ12089.1| Ribosomal protein L25 (general stress protein Ctc) [Riemerella anatipestifer RA-GD] Length = 202 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 10/193 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG P+ S ++ S + Sbjct: 1 MKSITIQGQKRESVGKKSTKALRDAELVPCVVYGGKE---PLHFSTEEKSFKNLVYTPEA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ E + + +D Q P++D ++H DF Q+S+ V + VPVR +S G+ Sbjct: 58 HTVSIEVNGETIPAVLQDIQFHPITDRILHVDFYQLSDDKPVVMEVPVRIT--GRSRGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD I +D+ L+IG+ ++ DI+ P+ + M N + Sbjct: 116 AGGVLRQSFRKLKVKALPANLPDEIVIDVTKLRIGNKTYVGDIKSPD-YTFMHPDNAVVV 174 Query: 183 TI----VAPISGS 191 + A G+ Sbjct: 175 AVKMSRTAMKGGA 187 >gi|262197679|ref|YP_003268888.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] gi|262081026|gb|ACY16995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium ochraceum DSM 14365] Length = 206 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 8/190 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFM 61 + KL+ R+ GK AR LR G++P I YG+ + P + + L Sbjct: 1 MEVGKLTVKRRNITGKSMARKLRTQGRLPGICYGSGVEQPIMLDFDGRAFRASLDPTKRQ 60 Query: 62 TTILTLDIGK-----ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 T++ L + + V+ KDYQ+DP+ L H DF+ V S VT VP+ F Sbjct: 61 NTVIDLTVEDDAGAGQSFPVMVKDYQIDPIRRELTHVDFITVDTSSEVTAEVPLEFT--G 118 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 KS G++ GG L+VV HE+ + C +IP I +D++DL D IH+ D++LPE + + Sbjct: 119 KSKGVELGGTLHVVRHELEVRCKPADIPSKIVIDISDLDTNDVIHVRDLKLPEGVFASTA 178 Query: 177 LNITIATIVA 186 +TI T V Sbjct: 179 EQLTIITCVP 188 >gi|16802257|ref|NP_463742.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes EGD-e] gi|46906443|ref|YP_012832.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes serotype 4b str. F2365] gi|47093153|ref|ZP_00230928.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|47096204|ref|ZP_00233803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|217965703|ref|YP_002351381.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|224500338|ref|ZP_03668687.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes Finland 1988] gi|224503469|ref|ZP_03671776.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL R2-561] gi|226222840|ref|YP_002756947.1| general stress protein [Listeria monocytogenes Clip81459] gi|254825875|ref|ZP_05230876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|254829302|ref|ZP_05233989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|254832468|ref|ZP_05237123.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 10403S] gi|254854441|ref|ZP_05243789.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|254901004|ref|ZP_05260928.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes J0161] gi|254913928|ref|ZP_05263940.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|254933051|ref|ZP_05266410.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|254938281|ref|ZP_05269978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|254992856|ref|ZP_05275046.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-064] gi|255026020|ref|ZP_05298006.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J2-003] gi|255028168|ref|ZP_05300119.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes LO28] gi|255520467|ref|ZP_05387704.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-175] gi|284803050|ref|YP_003414915.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284996191|ref|YP_003417959.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290894281|ref|ZP_06557248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|300766344|ref|ZP_07076303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|71153150|sp|Q724K2|RL25_LISMF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153151|sp|Q8YAD3|RL25_LISMO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|16409576|emb|CAD00738.1| ctc [Listeria monocytogenes EGD-e] gi|46879707|gb|AAT03009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes serotype 4b str. F2365] gi|47015452|gb|EAL06386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 1/2a F6854] gi|47018460|gb|EAL09218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes str. 4b H7858] gi|118420012|gb|ABK88268.1| general stress protein Ctc [Listeria monocytogenes] gi|217334973|gb|ACK40767.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23] gi|225875302|emb|CAS03999.1| Putative general stress protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601715|gb|EEW15040.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N3-165] gi|258607841|gb|EEW20449.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL R2-503] gi|258610892|gb|EEW23500.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes F6900] gi|284058612|gb|ADB69553.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5578] gi|284061658|gb|ADB72597.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 08-5923] gi|290556165|gb|EFD89712.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J2-071] gi|293584609|gb|EFF96641.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes HPB2262] gi|293591946|gb|EFG00281.1| general stress protein Ctc [Listeria monocytogenes J2818] gi|293595114|gb|EFG02875.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL J1-194] gi|300512943|gb|EFK40031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes FSL N1-017] gi|307569750|emb|CAR82929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria monocytogenes L99] gi|328467967|gb|EGF38994.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 1816] gi|328469739|gb|EGF40661.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes 220] gi|332310620|gb|EGJ23715.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A] Length = 207 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|332826853|gb|EGJ99653.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286] Length = 193 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L R +GK + + RK +IPA+IYG K I + R Sbjct: 1 MKTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGEKADKAIHFIVTNSEVRKLIYTPEI 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L +GK+ I KD Q+ PV+D ++H DFL V E +T+ VPV + + G+K Sbjct: 61 FLVDLTVGKDNYKAILKDIQVHPVTDEILHLDFLHVFENKPITIDVPVVL--DGLAEGVK 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL++ ++ + + +P+ + VD++ L +G SI + ++ E ++ N + Sbjct: 119 AGGKLSLDLRKLKVRALYDKVPEKVHVDVSGLALGKSIQVGELHF-EGLELLNAKNGVVC 177 Query: 183 TIVAPISG 190 + + Sbjct: 178 RVQLTRAA 185 >gi|315645551|ref|ZP_07898675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] gi|315279029|gb|EFU42339.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus vortex V453] Length = 191 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + K + LR +G IPAI++G D I LSA + K + L Sbjct: 3 VNLRAETRAVMNKTGLKQLRLSGLIPAIVFGAGEDNMMIQLSASEFGKWARNGKGGILEL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD +E + V+ + Q DPV+ IH DFL++ V V + +I K G K GG Sbjct: 63 CLD-NQEPILVLLESVQRDPVTREYIHVDFLRIHINEVVRTRVNLDYIGTAK--GAKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + + ++IP +I +D+++L+IGDS+H+ +++LP +S N + ++V Sbjct: 120 VVQIQSTFIEIESFPDHIPAAIPIDISELEIGDSLHVGELKLPGGVVPISSANELLVSVV 179 Query: 186 API 188 P Sbjct: 180 TPK 182 >gi|193212458|ref|YP_001998411.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobaculum parvum NCIB 8327] gi|226736295|sp|B3QMQ8|RL25_CHLP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193085935|gb|ACF11211.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobaculum parvum NCIB 8327] Length = 201 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS +R+ G+A+ LR+ G +PA++Y + I++ + K ++S Sbjct: 1 METRALSVNLREVKKNGAAK-LRQQGMVPAVVYHKGEETVAISVDEIALDKLVHSAESHL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK V KD Q DPV+D +IHADF + + V + VP+ + Sbjct: 60 IDLQYPDGK-SVRAFIKDLQFDPVTDRVIHADFKRFTADEVVEMEVPIH-VEGEAVGVKI 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEK-TSSMSQLNI 179 GGKL + H ++L N+P+ T+D++ L+ G S+H+ D++ +P + + Sbjct: 118 GGGKLQINMHTLTLKGKPANMPEHFTIDVSALETGHSLHISDLQATVPAGTIEIIGDADA 177 Query: 180 TIATIVAPI 188 I ++ AP Sbjct: 178 AIVSVAAPR 186 >gi|260577723|ref|ZP_05845658.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] gi|258604118|gb|EEW17360.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium jeikeium ATCC 43734] Length = 219 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 7/184 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ + Sbjct: 6 MADITRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNE-GV 64 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L+I + V+ K + ++ + HAD L V G V V VPV F + + Sbjct: 65 NAVLELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVVFTGQAAPGAL 124 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +++L NIP+ ITVD+ +IGD I D+++P S +S+ + I Sbjct: 125 -----VTQEADVITILADVLNIPEEITVDVEGKEIGDQILAGDLQMPGNASLVSEEDTLI 179 Query: 182 ATIV 185 +V Sbjct: 180 INVV 183 >gi|25027568|ref|NP_737622.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium efficiens YS-314] gi|71153138|sp|Q8FQV5|RL25_COREF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|23492850|dbj|BAC17822.1| putative 50S ribosomal protein L25 [Corynebacterium efficiens YS-314] Length = 202 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG + I L+ +D + + +N Sbjct: 1 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAGLVR-RN 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ LD+ + K + ++ + H D L ++ G V V +PV + Sbjct: 60 GVNAVMELDVEGVKQLAMIKHIDQNVLTFNIDHVDLLAITRGEKVEVEIPVIVEGQPAP- 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + A NIP+ I V + +++G I DI+L + + + + Sbjct: 119 ----NTMFVQDADTIRVEADALNIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDAEL 174 Query: 180 TIATIVAP 187 IA +V P Sbjct: 175 LIANVVLP 182 >gi|150024258|ref|YP_001295084.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium psychrophilum JIP02/86] gi|166223680|sp|A6GVZ1|RL25_FLAPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149770799|emb|CAL42264.1| 50S ribosomal protein L25 [Flavobacterium psychrophilum JIP02/86] Length = 203 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + LR G +P ++YG P + + +Y+ N T Sbjct: 1 MKSITIKGSERESVGKVATKALRNAGAVPCVLYGGD-QPVHFSADERAFKSLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ GK + + +D Q+ PV+D ++H DF Q+ E VT+ VPVR I SPG+ Sbjct: 60 VVIEVEGGK-SYNAVMQDIQVHPVTDKILHLDFYQLFEDKEVTMEVPVRII--GTSPGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD + D++ L++G+ I++ + EK + N + Sbjct: 117 LGGVLRLNSRKLKVKALPANLPDFLDADISPLEMGNKIYVTALA-NEKYKILHPENTVVC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|68536580|ref|YP_251285.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium jeikeium K411] gi|109893356|sp|Q4JU40|RL25_CORJK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68264179|emb|CAI37667.1| 50S ribosomal protein L25 [Corynebacterium jeikeium K411] Length = 214 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 7/184 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L +R + GKG++R LR++ ++PA++YGN DP + + + L ++ + Sbjct: 1 MADITRLKGELRTEFGKGASRRLRRDFRVPAVVYGNDLDPMHVHVDILEFQAILRNE-GV 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L+I + V+ K + ++ + HAD L V G V V VPV F + + Sbjct: 60 NAVLELEIEGQDHLVMIKAVDQNVLTLDVDHADLLNVKRGEKVEVDVPVIFTGQAAPGAL 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +++L NIP+ ITVD+ +IGD + D+++P S +S+ + I Sbjct: 120 -----VTQEADVITILADVLNIPEEITVDVEGKEIGDQVLAGDLQMPGNASLVSEEDTLI 174 Query: 182 ATIV 185 +V Sbjct: 175 INVV 178 >gi|225850827|ref|YP_002731061.1| 50S ribosomal protein L25/general stress protein Ctc [Persephonella marina EX-H1] gi|225645558|gb|ACO03744.1| ribosomal protein L25, Ctc-form [Persephonella marina EX-H1] Length = 199 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 4/180 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A+ R K + RK G IP +YG + + K ++ K L Sbjct: 5 IEWQAIPRTVGKKSEVKSFRKKGYIPVEVYGKGRENAHAYIYWKLLA--DRPKGMFLIDL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ KE I KD Q + + D IH D +V+ G + V VPV + K G++ GG Sbjct: 63 KIEGEKEPRVCILKDIQYNYLGDQPIHIDLYEVTFGVELDVDVPVELV--GKPKGLEVGG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H +++ IPD I VD++DL +GD +H+ DI PE M + IA ++ Sbjct: 121 VLEQHLHTITIRTVPRKIPDRIEVDVSDLDVGDVLHVRDITPPEGVRIMENPDEVIAVVI 180 >gi|315608437|ref|ZP_07883425.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] gi|315249897|gb|EFU29898.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574] Length = 201 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 97/191 (50%), Gaps = 6/191 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE ++ R +GK +++LLRK G +P +YG P ++ ++ R Sbjct: 1 MKEINVTGQKRTDLGKKASKLLRKEGMVPCNLYGEAKKDGKPVALSFASPMSELRKIVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E I K+ Q DPV+D +IH DFL+V++ +T+ +PV+ + + Sbjct: 61 PHIYVINLIIDGESHTAIMKELQFDPVTDAVIHIDFLEVNDQKPITIGIPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ LKIG SI + ++ E + + Sbjct: 119 GVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSF-EGLDIATSKEV 177 Query: 180 TIATIVAPISG 190 + +I + Sbjct: 178 VVCSIKMTRAA 188 >gi|167753867|ref|ZP_02425994.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] gi|167658492|gb|EDS02622.1| hypothetical protein ALIPUT_02152 [Alistipes putredinis DSM 17216] Length = 191 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ AV R+ GK +A+ +R+ GQIPA++YG + ++ ++I +Y+ N Sbjct: 1 MKTIQVKAVKRENYGKKAAKAVRREGQIPAVLYGGG-ETVSFSVDPREIKPLIYTPNSYI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I + + +D Q P+ + ++H DF +V G V + +PVR + G+K Sbjct: 60 --VDLEIDGKTEKAVLRDVQFHPIREEILHMDFYRVQPGKPVAISIPVRLT--GNAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++++ + +PD + +D+ L +G +I + D+ + ++ + Sbjct: 116 IGGKLVLSARKLTVSAQLDKLPDELVIDVTPLGVGKTIFVGDLNF-DGVKFLTPATTAVC 174 Query: 183 TIVAPIS 189 + + Sbjct: 175 AVRVTRA 181 >gi|116751071|ref|YP_847758.1| 50S ribosomal protein L25/general stress protein Ctc [Syntrophobacter fumaroxidans MPOB] gi|166223726|sp|A0LPH1|RL25_SYNFM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116700135|gb|ABK19323.1| LSU ribosomal protein L25P [Syntrophobacter fumaroxidans MPOB] Length = 199 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + +L A R K GKG AR LR+N +PA++YG ++ +++ + + + L + + Sbjct: 2 DIELVAQTRTKSGKGPARALRRNEMVPAVLYGPKAETVSLSVPRQRLERLLRDMGEESKL 61 Query: 65 LTL----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L L D E+ V+ ++ Q+ PV +H DF +V + V VPV + + G Sbjct: 62 LRLTVEGDGTAEMKQVLIREVQVHPVRRRFLHVDFYEVPLDHPIVVEVPVELL--GEPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG LN++ +S+ C IP+ + VD++ L IG SI +E +R + Sbjct: 120 VKKGGTLNLIQRMLSVRCLPGEIPEKVQVDVSKLDIGSSIQVEQLRTIVPFELTDDGGMA 179 Query: 181 IATIVAPISG 190 + +VAP Sbjct: 180 VVNVVAPEGA 189 >gi|209886302|ref|YP_002290159.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] gi|226736343|sp|B6JIP4|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5] Length = 240 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 116/188 (61%), Gaps = 1/188 (0%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A R K GKG+AR R+ G++PA+IYG+ P I+L K + + +++ +F+ Sbjct: 1 MATVKELKATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQSIFAGHFL 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 TT+ +D+ + VIP+DY LDPV D +H DFL++ EG+T+ V VP+ SPG+ Sbjct: 61 TTLFNIDLDGQKYRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAELSPGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG +N+V H V L ++IP I VD++ L+I +S+H+ D+ LP+ + + +T+ Sbjct: 121 KRGGTVNIVNHTVELEAEVDHIPQFIEVDVSKLEINNSVHLNDVALPKGVKPVLREGMTL 180 Query: 182 ATIVAPIS 189 T+V P Sbjct: 181 VTVVPPSG 188 >gi|317126792|ref|YP_004093074.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] gi|315471740|gb|ADU28343.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus cellulosilyticus DSM 2522] Length = 212 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ + +R +G +P +IYG KP+ + + K + +N + Sbjct: 3 TLQANTREDLRGSRLNKIRNDGNVPGVIYGKTIGNKPVTVEGSSLLKMIR-ENGRNGVFK 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ + V+ D Q+DP+ + +IH DF S + VPV+ + ++ G+K GG Sbjct: 62 LDVDGQQTDVMIYDIQVDPLKNEVIHVDFYAADMKSELDADVPVQAV--GEAIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L HEVS+ N++PDSI +D++ L + DS+ ++D++ K + ++ +I+ Sbjct: 120 LQQSLHEVSVKALPNDLPDSIEIDVSQLDVNDSLQVKDLKTSGKYEINNDPEESVLSILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|116871593|ref|YP_848374.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740471|emb|CAK19591.1| ribosomal 50S general stress protein L25/Ctc [Listeria welshimeri serovar 6b str. SLCC5334] Length = 207 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTKLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + ++ T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPNNKDYVVQAEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|50955306|ref|YP_062594.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] gi|71153146|sp|Q6ADQ7|RL25_LEIXX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50951788|gb|AAT89489.1| 50S ribosomal protein L25 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 200 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K++A +RD GKG+AR +R G+IPA+IYG+ S+P I L A + L N Sbjct: 1 MADESNKVAAEVRDSFGKGAARKIRAAGKIPAVIYGHGSEPVHITLPAHQVGLLLRKAN- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +L +DI + + KD Q DPV I+ H D L V G V V VPV E S Sbjct: 60 --AVLDIDIAGKTQLALVKDVQKDPVLQIIEHLDLLVVRRGEKVQVEVPVHVEGEPFSGT 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 I + L A NIP+ I +D+ + G H +D LP ++ Sbjct: 118 IAMLDIP-----TIKLEVEATNIPERIVIDVTGAEEGTQYHAKDFALPAGAVLAEDEDLL 172 Query: 181 IATIVAP 187 + I+ P Sbjct: 173 LLNIIVP 179 >gi|259507025|ref|ZP_05749925.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] gi|259165303|gb|EEW49857.1| 50S ribosomal protein L25 (general stress protein CTC) [Corynebacterium efficiens YS-314] Length = 222 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M K + A R + GKGSAR R G +PA++YG + I L+ +D + + +N Sbjct: 21 MANKFETIEAANRTEFGKGSARRARVAGLVPAVVYGADMESNLHITLNHRDFAGLVR-RN 79 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + ++ LD+ + K + ++ + H D L ++ G V V +PV + Sbjct: 80 GVNAVMELDVEGVKQLAMIKHIDQNVLTFNIDHVDLLAITRGEKVEVEIPVIVEGQPAP- 138 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + A NIP+ I V + +++G I DI+L + + + + Sbjct: 139 ----NTMFVQDADTIRVEADALNIPEEIVVSIEGMELGSQITAGDIKLDDDMTLVDDAEL 194 Query: 180 TIATIVAP 187 IA +V P Sbjct: 195 LIANVVLP 202 >gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B] Length = 200 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 6/164 (3%) Query: 31 PAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDIL 90 PA++YG +P I L KD K L ++ F T I+ +D+ VI KD Q P Sbjct: 2 PAVVYGTDKEPTSITLIRKDFEKMLEAETFYTAIIDIDVEGTHESVILKDLQRHPAKGFP 61 Query: 91 IHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGKLNVVCHEVSLLCPANNIPDSITV 149 +HADFL+++ + + V +P+ F+NE+ G+K GG + ++ + C NIP+ I V Sbjct: 62 MHADFLRINADTELKVAIPIHFMNEDTCVGVKVNGGVIQRQETDIEVSCLPRNIPEYIEV 121 Query: 150 DLNDLKIGDSIHMEDIRLPEKTSSMSQL-----NITIATIVAPI 188 D+ L IGDSIH+ D+ LPE S + ++ I ++VAP Sbjct: 122 DMAALDIGDSIHLTDVTLPEGVVSTALEFGELTDLMIVSVVAPR 165 >gi|70727509|ref|YP_254425.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus haemolyticus JCSC1435] gi|82581584|sp|Q4L3F8|RL25_STAHJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|68448235|dbj|BAE05819.1| 50S ribosomal protein L25 [Staphylococcus haemolyticus JCSC1435] Length = 221 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVHLV--GEAAGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+ +L++ DS + DI++ + + ++ T+V Sbjct: 120 VVEQPLFDLQVTATPENIPESIEVDITELEVNDSYSVSDIKVSGDFTIENDPEESVVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|34540029|ref|NP_904508.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis W83] gi|188994143|ref|YP_001928395.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas gingivalis ATCC 33277] gi|71153158|sp|Q7MXK8|RL25_PORGI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736349|sp|B2RHF3|RL25_PORG3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34396340|gb|AAQ65407.1| ribosomal protein L25 [Porphyromonas gingivalis W83] gi|188593823|dbj|BAG32798.1| putative 50S ribosomal protein L25 [Porphyromonas gingivalis ATCC 33277] Length = 192 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L+ R + GK +A+ +RK QIPA++YG + +S + +YS Sbjct: 1 MKTFQLTGTPRAEFGKKAAKAIRKEDQIPAVLYGGKGEGVNFIVSQDAVRNLIYSPEIFL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 LT++ G I K+ Q PV+D +IH DFLQV++ V + VPV + G+K Sbjct: 61 VELTVE-GSGSYKAILKEIQFHPVTDRIIHIDFLQVTDEKPVVMEVPVVLTGH--AEGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL++ ++ + + IP+ + +D++DL++G +I + ++ E + M+ N + Sbjct: 118 AGGKLSLEMRKLKVKALYSEIPEKLDIDVSDLQLGKTIQVGELHF-EGLTLMNAKNAVVC 176 Query: 183 TIVAPISG 190 + + Sbjct: 177 AVKLTRAA 184 >gi|323344944|ref|ZP_08085168.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] gi|323094214|gb|EFZ36791.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269] Length = 209 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 6/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE +S R+ +GK ++++LRK G +P +YG P +A ++ R Sbjct: 1 MKEINVSGQKREDLGKKASKVLRKEGLVPCNLYGEAKQDGKPVALAFASPMSELRKIVYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I E I K+ Q PV+D L+H DF +V++ +T+ +PV+ + + Sbjct: 61 PHIYVIRLIIDGEEHTAILKELQFHPVTDALLHVDFFEVNDQKPITIGIPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G++ GG++N+ ++++ P IP+ + +D+ L IG SI + ++ E + ++ Sbjct: 119 GVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTKLTIGKSIKVGELSY-EGLELATGKDV 177 Query: 180 TIATIVAPISGS 191 + +I + Sbjct: 178 VVCSIKMTRQAA 189 >gi|242371669|ref|ZP_04817243.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] gi|242350618|gb|EES42219.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis M23864:W1] Length = 218 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+V Sbjct: 120 VVEQPLFDLEVTATPENIPESIEVDISELQINDSFSVADVKISGDFTIENDPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|332878587|ref|ZP_08446307.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683488|gb|EGJ56365.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 198 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR GQ+P ++YG + SA +++ Sbjct: 1 MQSITIKGSQRESVGKAASKALRNAGQVPCVLYGGDD---VLHFSAPELAFAGIVYTPNV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+++ + I +D Q DPV+D +IH DF Q+++ +T+ VP++ + SPG+ Sbjct: 58 YTATIEVNGKSYTAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQI--QGTSPGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP-EKTSSMSQLNITI 181 GG L VV ++ + +N+PD I VD++ L++G+ +++ +LP E M N + Sbjct: 116 AGGTLRVVNRKLKIKALPDNLPDFIPVDISALEMGNRLYIT--KLPQENYKIMHPDNTVV 173 Query: 182 ATI 184 I Sbjct: 174 CQI 176 >gi|297172152|gb|ADI23133.1| ribosomal protein L25 (general stress protein Ctc) [uncultured gamma proteobacterium HF0770_09E07] Length = 238 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 106/194 (54%), Gaps = 5/194 (2%) Query: 3 QKECKLSAVMRDKVGKGSARL-LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + KL A R+++G + + + K+ ++P IIYG P+PI + ++ K + ++ Sbjct: 1 METLKLKAEKREEIGGLAPKKAIYKDNKVPGIIYGGKDQPQPIYVQKNELLKIISNEGLF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I+ ++I + +V+ K+ Q P ++ H D +V +G+ VTV VPV N++ G+ Sbjct: 61 NSIVEIEIESKKENVVFKEVQKHPSKNVFTHIDLQRVVKGTQVTVTVPVVLKNQDNCYGV 120 Query: 122 -KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS---MSQL 177 +GG +N VC E+++L +IP+SI VD+ ++K +++ + + L E + + Sbjct: 121 KMEGGVINHVCKEITVLSSPESIPESIEVDMEEIKTKENVRLSSLSLNEGYDFPTNLKEQ 180 Query: 178 NITIATIVAPISGS 191 + + +++ G+ Sbjct: 181 DPVLVSVLTARGGT 194 >gi|198283910|ref|YP_002220231.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666710|ref|YP_002426544.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248431|gb|ACH84024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518923|gb|ACK79509.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 202 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 106/191 (55%), Gaps = 3/191 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++A R+ +G+ ++R LR+ G +PA++YG+ I + A+ + K L + T Sbjct: 1 MTDFAIAAQPREDIGRRASRRLRRTGMVPAVLYGDGKAAMGICIEARLLRKLLPDERAYT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++TL + + +D Q+ P + ++H DFL+V G V +HVPV F+NE+ GIK Sbjct: 61 HVITLQLPGSKETALIRDIQMHPYKEEVLHMDFLRVHAGEQVRLHVPVHFLNESTCAGIK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 GG L+ EV + P + +P+++ VD+ L IGDS+H+ I +P + + + + Sbjct: 121 AGGVLHRALVEVEVEAPVDRLPEALQVDIAGLHIGDSLHLSQISVPAGVTLVPLLHEDDK 180 Query: 180 TIATIVAPISG 190 + +I P +G Sbjct: 181 EVVSIHNPRTG 191 >gi|297582391|ref|YP_003698171.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] gi|297140848|gb|ADH97605.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus selenitireducens MLS10] Length = 213 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R+++ + +R G IPA++YG KP+ + D K T Sbjct: 1 MATI-LKAAPRNEMKGSTLTTIRSAGWIPAVVYGKEYGNKPVQVEEIDFIKTYR-AEGKT 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +LD+ E V+ D Q D + + +H DF + + VPV + ++ G+K Sbjct: 59 GVFSLDVEGEKTDVMIYDIQYDMMKNQYVHIDFYAANMKEEMDADVPVNVV--GEAQGVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L E+S+ +PDSI V++ +L++ DSI ++D++ + + Sbjct: 117 DGGVLQQGVFELSVRALPKELPDSIDVNVEELEVNDSIFVKDLKSGADFEFNNDPEEMVV 176 Query: 183 TIVAP 187 +IV P Sbjct: 177 SIVPP 181 >gi|332971129|gb|EGK10094.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella kingae ATCC 23330] Length = 188 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 5/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR N Q+PA++YG + K I + K++ L + F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHNAQVPAVVYGLG-ETKAITVDHKEMYFALQKETFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QGGK 126 I + +VI +DYQ+ PV + H DF + V + +PV +N S +K Q G+ Sbjct: 63 SIDGKEQNVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRIKLPVHIVNAEISHAVKLQSGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ DI+ PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCEKVVAGDILHLSDIKYPEGVQSIALKRNSNLAVAT 182 Query: 184 IV 185 + Sbjct: 183 VT 184 >gi|149182810|ref|ZP_01861272.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] gi|148849477|gb|EDL63665.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. SG-1] Length = 217 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R + LR G IPA++YG ++ PIA+ + + K + + I+ Sbjct: 3 VELKANNRTGSKRSDLTNLRHQGSIPAVVYGYKTENTPIAIDSIEFIKTMR-EAGRNGII 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L+I +V+ DYQ D + D +IHADFL V+ S + V + + +S G+K GG Sbjct: 62 SLNIDGNKQNVVLSDYQQDHIKDAVIHADFLAVNMSSEMDADVRIELV--GESAGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L H+VS+ ++IPDS+ VD++ L++G++I + DI+ + ++ TIA+++ Sbjct: 120 VLQQPLHDVSVTAKPSDIPDSVQVDISGLQVGETITVGDIKGNYSFTINTEDERTIASVL 179 Query: 186 API 188 AP Sbjct: 180 APR 182 >gi|119357476|ref|YP_912120.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium phaeobacteroides DSM 266] gi|166223674|sp|A1BH19|RL25_CHLPD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119354825|gb|ABL65696.1| LSU ribosomal protein L25P [Chlorobium phaeobacteroides DSM 266] Length = 198 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRK G +PA+IY + ++++ + K ++S Sbjct: 1 MEIIALGVEPR-IIRKKEAAKLRKTGIVPAVIYHKGEETISVSVNEIALKKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK V KD Q DPV+D +IH DF S V + VPV + G++ Sbjct: 60 IDLKFPDGK-TVRSFIKDVQFDPVTDRIIHTDFQLFSADELVEMDVPVGTT--GDAVGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNIT 180 +GG++ ++ H ++L ++PD +D +L+IG SIH+ +I + + M + Sbjct: 117 KGGRIQIIKHALTLKGMPADMPDHFLIDCTNLEIGHSIHVREIPMDARPGLTIMDDPDTP 176 Query: 181 IATIVAPI 188 + TIVAP Sbjct: 177 VVTIVAPK 184 >gi|195953330|ref|YP_002121620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] gi|226736331|sp|B4U931|RL25_HYDS0 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|195932942|gb|ACG57642.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobaculum sp. Y04AAS1] Length = 197 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + + R+ KG + RK G +P IYG + KD++ + F Sbjct: 1 MKRVSIELLEREASTKGDKKSKRKEGLVPVEIYGKGVQNIHAYMRIKDLAAMPHGTTF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ +G E++ + KD Q + D +H D +S + V VP+ F+ K G++ Sbjct: 59 -LIEAKLGNEVLPCLLKDIQYGWLGDNPVHVDLYNISNVTETDVEVPLEFVGTPK--GVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + H + L NIP+ ITVD++++ +G +H++D+ +P M + Sbjct: 116 LGGTLEIHLHSIELKVDPRNIPEKITVDISNVDLGGVLHVKDLNIPANCRLMEDPEEVVL 175 Query: 183 TIV 185 + Sbjct: 176 VVA 178 >gi|300814301|ref|ZP_07094573.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511568|gb|EFK38796.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 211 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GK LR G +P +IYG +P ++ I K + I+ + Sbjct: 4 LKLSSRKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVSGHENVILKLFQEV-GTSVIIEV 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ Sbjct: 63 EIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDEIKVQPSNLI- 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 V +EV + C +P + V++ D++IGD+I + D+ + E + +AT+ Sbjct: 122 -QVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALDADEVVATLS 180 Query: 186 API 188 AP Sbjct: 181 APR 183 >gi|325849223|ref|ZP_08170674.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480223|gb|EGC83290.1| ribosomal protein L25, Ctc-form [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 214 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L + R+ VGK LR+ +P ++YG + + +++D K S+ + Sbjct: 1 MADIVLKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKV-LSQAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+ LD+ E V V+ KDYQ+ P H DF ++ + V VPV + Sbjct: 60 TIIDLDLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIR--V 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNIT 180 + L V + C IP V + +++IGD+ + D+ + E + + + + Sbjct: 118 EPSVLVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFIVADLDIAKDENINILLEDDEV 177 Query: 181 IATIVAP 187 + ++ P Sbjct: 178 VCSLQEP 184 >gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter pasteurianus IFO 3283-01] gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01] gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03] gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07] gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22] gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26] gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32] gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12] Length = 204 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIVKGIQTSGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAPI 188 + TVDL+ L I D++ ED++ E + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTEGVTPLTHEENFVVASIAAPS 188 >gi|205371997|ref|ZP_03224815.1| 50S ribosomal protein L25 (general stress protein Ctc) [Bacillus coahuilensis m4-4] Length = 214 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L+A R+ + LR G IPA++YG+ D I + K + Sbjct: 1 MSNQ---LTATKREGFKRSDLTSLRNQGSIPAVVYGHKMDSTSIMIDEPSFIKTMREV-G 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ L + V+ DYQ DP+ D ++HADFL ++ + V + + + G Sbjct: 57 RNGIINLLVDGNKTQVVLTDYQRDPIKDEVVHADFLAINMSEDMEASVRIDLV--GDAAG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG + HE+S+ + PDSI VD+ +L++G++I + DIR + ++T Sbjct: 115 VKDGGVMQQPLHEISVTAKPQDFPDSIKVDVENLQVGETITVGDIRQQFSYELNLEDDVT 174 Query: 181 IATIVAPI 188 +A+I+AP Sbjct: 175 VASILAPR 182 >gi|281420709|ref|ZP_06251708.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] gi|281405482|gb|EFB36162.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205] Length = 201 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS----DPKPIALSAKDISKRLYSK 58 KE ++ R +GK +++ LRK G IP +YG P+ ++ + R Sbjct: 1 MKEINVTGQKRTDLGKKASKTLRKEGLIPCNLYGEKKGENGAPEALSFAVPFAELRKIIY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L I E I K+ Q P +D +H DF +V++ +T+ +PV+ + Sbjct: 61 TPHVYVINLIIDGESHTAIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLT--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG++N+ ++++ P IP+ + +D+ +LKIG SI + D+ E + Sbjct: 119 QGVRDGGRMNLSIRKINVTAPYQVIPEHLDIDVTELKIGKSIKVGDLSF-EGLELATSKA 177 Query: 179 ITIATI 184 + + +I Sbjct: 178 VVVCSI 183 >gi|223044426|ref|ZP_03614459.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] gi|222442215|gb|EEE48327.1| ribosomal protein L25, Ctc-form [Staphylococcus capitis SK14] Length = 219 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+V Sbjct: 120 VVEQPLFDLEVSATPENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|264676949|ref|YP_003276855.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] gi|262207461|gb|ACY31559.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni CNB-2] Length = 207 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGTAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|242241586|ref|ZP_04796031.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] gi|242234967|gb|EES37278.1| 50S ribosomal protein L25/general stress protein [Staphylococcus epidermidis W23144] Length = 223 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 98/188 (52%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M+ + L +++R K + + LR +G++PA++YG + + + + K + Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV- 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ Sbjct: 60 GRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAV 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 118 GAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENDPED 177 Query: 180 TIATIVAP 187 +I T+V P Sbjct: 178 SIVTVVPP 185 >gi|222152154|ref|YP_002561314.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] gi|222121283|dbj|BAH18618.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402] Length = 216 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A++R K KG +R G+IPA++YG + + + + K + + Sbjct: 2 TSLKAIIRKGKQTKGELNKIRNEGKIPAVVYGYGASNTSVKVDEPEFVKVIREV-GRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ+DP+ + + H DFL ++ S +TV V V ++ G+K+G Sbjct: 61 IELGVGSKAIKVMVSDYQIDPLKNKVTHIDFLAINMKSELTVDVVVNLT--GEAQGVKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + ++S+ + IP++I VD+ +L IGDSI + D++ + + ++ + I ++ Sbjct: 119 GVVQQPLFQLSVTATPDEIPETIEVDVTELNIGDSIMVGDLKADKAYTINNEDDEAIVSV 178 Query: 185 VAP 187 V P Sbjct: 179 VPP 181 >gi|314937292|ref|ZP_07844634.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] gi|313654588|gb|EFS18338.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis subsp. hominis C80] Length = 221 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ T+V Sbjct: 120 VVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|228476234|ref|ZP_04060937.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] gi|228269719|gb|EEK11218.1| ribosomal protein L25, Ctc-form [Staphylococcus hominis SK119] Length = 218 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+ DL+I DS + DI++ + + ++ T+V Sbjct: 120 VVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|299531512|ref|ZP_07044918.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] gi|298720475|gb|EFI61426.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas testosteroni S44] Length = 207 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F ++IL Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSIL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 ++I ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|222099805|ref|YP_002534373.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] gi|254801063|sp|B9K7S4|RL25_THENN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221572195|gb|ACM23007.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359] Length = 215 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT--- 62 L +R GK A+ LR+ G++PA++YG +DP P+ + + K ++ T Sbjct: 2 VSLEVRLRTPKGKREAKRLRRRGEVPAVVYGPATDPIPVKIKRSLLEKVFHTITETTPIR 61 Query: 63 --TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + V K Q D VS+ ++H DF + +G + ++VP++ + K G Sbjct: 62 LVIKDDEERTVSEKTVFLKMIQRDKVSEAIVHVDFYEPVKGHRMRINVPLKVV--GKPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVYHEEIPVETDPDRVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEDEEA 179 Query: 181 IATIVAPI 188 + +I+ P Sbjct: 180 VVSILVPK 187 >gi|213962523|ref|ZP_03390785.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] gi|213954849|gb|EEB66169.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno] Length = 199 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + I +D Q DPV+D +IH DF Q+++ +T+ VP++ SPGI Sbjct: 60 AAIELNG--KTYDAILQDIQFDPVTDKIIHIDFYQLNKNKEITIEVPIQIE--GTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + V+++ L++G+ +++ + E M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVNISGLEMGNKLYVTKLAQ-ENYKIMHPDNTVVC 174 Query: 183 TI 184 I Sbjct: 175 QI 176 >gi|296329554|ref|ZP_06872040.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672751|ref|YP_003864422.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] gi|296153297|gb|EFG94160.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410994|gb|ADM36112.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. spizizenii str. W23] Length = 205 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + T++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNTVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 LD+ E V+ D Q DP+ + + HADF V+ + V VP+ ++ G+K GG Sbjct: 62 LDVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLT--GEAIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D+++L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISNLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|221068918|ref|ZP_03545023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] gi|220713941|gb|EED69309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas testosteroni KF-1] Length = 207 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 98/186 (52%), Gaps = 5/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R K G G++R LR +G+ P I+YG + + I + + ++ + F +++L Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAG-EAQLIEIDHNALWHAVHKEAFHSSVL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 +++ ++ V+ +D Q P ++ H DF +V + + ++VP+ F +SP +K + Sbjct: 60 DMEVNGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNITI 181 + + HE+ ++C N+P+ I VDL+ L + ++ ++LP ++ + N ++ Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179 Query: 182 ATIVAP 187 +I P Sbjct: 180 ISIKLP 185 >gi|237785153|ref|YP_002905858.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium kroppenstedtii DSM 44385] gi|237758065|gb|ACR17315.1| 50S ribosomal protein L25 [Corynebacterium kroppenstedtii DSM 44385] Length = 218 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 7/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M L A+ R + GKG++R LR+ G+IPA+IYG D P I++ + + L + Sbjct: 1 MATNITDLEALPRHEFGKGASRRLRRAGRIPAVIYGKELDAPIHISVDSIEFHAVLR-NH 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+ L++ E + K + ++ HAD L + G V V VPV E Sbjct: 60 GANAIVDLNVDGEKHLTMVKAVDQNVLTLDADHADLLAIRRGEKVEVEVPVVTEGEVAPG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + +IP+ IT+D+ L++G I D+++P T+ +S Sbjct: 120 AMLMQDVDV-----IDVEADVLSIPEEITIDVEGLEVGTQITAGDVQMPANTTLISDPET 174 Query: 180 TIATIVAP 187 I +V P Sbjct: 175 LIVNVVVP 182 >gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] gi|227235227|gb|EEI85242.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] Length = 216 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R+ GK + +RKN IP +IY + + +A+D K L + + Sbjct: 1 MAKIVLQAEKREATGKNQVKKIRKNELIPGVIYAKNQENVNVQFTARDFEKVLR-QAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TLDI E V+ K++ P + +H DF + + + V VPV +N + + Sbjct: 60 TIITLDINGEGKEVLIKEFASHPYKNQFLHVDFQAIDQNQPIRVTVPVVLLNRDDMNEV- 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 G L V + C IP + +D+ +L+IGD+ + D+ + E + + + + Sbjct: 119 -NGVLVQNLENVEVECLPKYIPQTAEIDVKELQIGDNKTVADLDIASNENITILVEEDEV 177 Query: 181 IATIV 185 + ++ Sbjct: 178 VCSLQ 182 >gi|288799717|ref|ZP_06405176.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] gi|288332965|gb|EFC71444.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str. F0039] Length = 199 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 6/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG---NMSDPKPIALSAKDISKRLYSKN 59 KE L+ +R +GK +++ LRK G IP +YG P + + R Sbjct: 1 MKEINLTGQLRSDLGKKASKSLRKEGLIPCNMYGIATTDGKPSAFSFTVPMTELRKLIYT 60 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L + +L I K+ Q PV+D ++H DFL+V+E +T+ +PV+ + + Sbjct: 61 PHIYLVNLTVDGKLHTAILKEIQFHPVTDSVLHVDFLEVNEEKPITIGLPVKLV--GLAQ 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 GI+ GG++++ ++++ P ++P+ + VD+ L IG SI + + E ++ ++ Sbjct: 119 GIRDGGRMSLSLRKLNVKAPYKSLPEHLDVDVTALTIGKSIKVGQLSY-EGLELVTGKDV 177 Query: 180 TIATI 184 + +I Sbjct: 178 VVCSI 182 >gi|327403219|ref|YP_004344057.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] gi|327318727|gb|AEA43219.1| 50S ribosomal protein L25 [Fluviicola taffensis DSM 16823] Length = 194 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +LS R VGK A+ LR G +P ++YG + +L + K N Sbjct: 1 MKVAQLSGSPRANVGKKDAKALRDAGLVPCVLYGQGTQ-THFSLPDIKVEK--LIFNPDV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + LDI + + I ++ Q +P++D ++H DFL++ V V +PVR S G+ Sbjct: 58 FKIELDIDGKKSNAIIQEIQQNPITDKVVHIDFLELDAKKPVKVALPVRLT--GASRGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L V + ++ ++P++I +D+ L+IG S+ ++D+ + + N + Sbjct: 116 AGGRLMQVFRRLRVVGLPADLPEAIVIDITKLRIGQSVRVKDLE-NDGLTISEAKNAVVV 174 Query: 183 TIVAPISGS 191 ++ S Sbjct: 175 SVKMARGAS 183 >gi|240169901|ref|ZP_04748560.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 8/191 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + L +R GKG++R R++G+IPA++YG+ ++P+ + L D + L + Sbjct: 1 MAKAAVNQLKVTVRTATGKGASRRARRDGRIPAVLYGHGAEPQHLELPGHDFAAVLRH-S 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI + + K + P+ + HAD L V G V + Sbjct: 60 GTNAVLTLDIAGKEQLALTKALDIHPIRRTIQHADLLVVRRGEKVV-----VEVAVVVEG 114 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + + + + A +IP+ +TV + D + G I LP + +S + Sbjct: 115 EAASGTLVTQEANAIEIEAEALSIPEHLTVSVEDAEPGTQFTAGKIALPRGVNLISDPEL 174 Query: 180 TIATIV-APIS 189 + +V AP + Sbjct: 175 LVVNVVNAPTA 185 >gi|149194451|ref|ZP_01871548.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] gi|149135626|gb|EDM24105.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter mediatlanticus TB-2] Length = 178 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + + LR++G + A IYG + A D K + N I + Sbjct: 2 LEGIIRESTSKSATKKLRRDGYLIANIYGKGQENINAAFKKSDFIKYMR--NKEHLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + ++YQ DPV+ L+H D L +G +VP++ G+K G L Sbjct: 60 KVGNKEFKAVVQEYQKDPVTGDLLHVDLLIAQDGVKQYFYVPIKVK--GTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + +PD +D+++L +GD+I + DI PE +I I ++ Sbjct: 118 VYHRRRIKVKSTPEKLPDYFELDVSNLDVGDNILIRDIEFPEGVECYLNPSIPIVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|225848300|ref|YP_002728463.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurihydrogenibium azorense Az-Fu1] gi|225644287|gb|ACN99337.1| ribosomal protein L25, Ctc-form [Sulfurihydrogenibium azorense Az-Fu1] Length = 196 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 4/180 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + + A+ R K K + R G IPA +YG + + K + Sbjct: 1 MIQTIEWKALPRKKGTKSEVKQNRMKGLIPAEVYGKGHPNVSVYIQKK--ALLSRPHGNF 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L ++ E I KD Q + + D IH D +V+ G + VPV F+ K+ G+ Sbjct: 59 LINLLVEGDPEPKLCILKDIQYNYLGDEPIHVDLYEVTSGVEFDIEVPVEFV--GKAKGV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++GG H + + NIP+ I VD+++L IGD +H+ DI PE M+ + + Sbjct: 117 EKGGIFEAHLHSIIVRTEPKNIPEKIVVDVSNLDIGDVLHVRDITPPEGVKIMTHGDEVL 176 >gi|72160820|ref|YP_288477.1| 50S ribosomal protein L25/general stress protein Ctc [Thermobifida fusca YX] gi|109893401|sp|Q47SW3|RL25_THEFY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71914552|gb|AAZ54454.1| LSU ribosomal protein L25P [Thermobifida fusca YX] Length = 194 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +++A R + GKG+AR R+ G++PA++YG+ P+ I L D+ L + N + Sbjct: 1 MSEVRIAAEPRTEFGKGAARRARRAGKVPAVLYGHGIAPRHINLPGHDLMLALKTPNVLL 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + ++ V+PK Q DP+ L H D L V G V V VP+ E + G+ Sbjct: 61 RL--EGVDEKESLVLPKSVQRDPIKGFLEHVDLLVVQRGEKVVVEVPLLVKGEVGAGGVL 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + A IP+ I VD++ L IG ++ D++LPE + Sbjct: 119 NLEMAQ-----AEVRAEATRIPEGIEVDVDGLPIGTNVTAGDLKLPEGVELAMDPETIVM 173 Query: 183 TIV 185 ++V Sbjct: 174 SVV 176 >gi|148265701|ref|YP_001232407.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter uraniireducens Rf4] gi|189042359|sp|A5G7R6|RL25_GEOUR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146399201|gb|ABQ27834.1| LSU ribosomal protein L25P [Geobacter uraniireducens Rf4] Length = 194 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF-- 60 +E L+ +R K GKG +R LR+N IP ++YG + P++LS K++S + + Sbjct: 1 MEERVLNVELRTKTGKGISRQLRRNNFIPGVVYGKGMESVPVSLSTKELSTAIAGEGGRN 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L G + VI + D + H D +++ V V VPV + + G Sbjct: 61 HLLTLKGGGGLDGQMVIVAELLQDCLKGTPRHVDLHKINMADKVRVKVPVNLV--GSAVG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+ HE+ + C +IP+ I VD+ +L IG S+H+ DI+ + ++ Sbjct: 119 VKEGGLLDFAMHEIEIECFPTHIPEHIDVDVTELTIGHSLHIGDIKELPGIKVLGDATVS 178 Query: 181 IATIV 185 + +I+ Sbjct: 179 VVSIL 183 >gi|171910045|ref|ZP_02925515.1| 50S ribosomal protein L25/general stress protein Ctc [Verrucomicrobium spinosum DSM 4136] Length = 224 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 4/188 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L A +R G + + LRK G IPA+IYG + +++K + + Sbjct: 1 MAKILDLQAKVRTAEGTSAVKRLRKAGSIPAVIYGKKHSNAKVEVNSKTFTAIIEHSASD 60 Query: 62 TTILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L I + ++ Q D + ++H DF V+ + VPV + Sbjct: 61 NILVNLKIDGEANDALALVQEVQHDYLRGGILHVDFHAVAADEDIHAAVPVVLSGIEAAE 120 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + EV C ++P+SI +D++ L +G++ H+ ++ LPE SS + ++ Sbjct: 121 KKGGKLEFVLHSLEVH--CLPKDLPESIALDVSYLNVGEATHVSELALPEGVSSKLEGDV 178 Query: 180 TIATIVAP 187 +A + P Sbjct: 179 VVAILKEP 186 >gi|89890034|ref|ZP_01201545.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] gi|89518307|gb|EAS20963.1| ribosomal protein L25 [Flavobacteria bacterium BBFL7] Length = 211 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G +P +IYG +P K +Y+ + MT Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGLVPCVIYGGD-EPVHFQAEEKAFKNLVYTSDAMT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L I +D Q PV + L+HADF Q+ + VT+ VPV + S G+ Sbjct: 60 VVIDL-GKDGQYAAIAQDMQWHPVKEQLLHADFYQIFDDKPVTMEVPVVTV--GTSRGVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + N+PD I VD+ +KIG+ ++ D+R+PE M ++ + Sbjct: 117 NGGVLRRNNRRLKVKAIPANLPDLIEVDIAPMKIGNKKYVRDLRVPE-YEIMHPDSVVVV 175 Query: 183 TIVAPISG 190 I + Sbjct: 176 MIKTSRTA 183 >gi|313680824|ref|YP_004058563.1| LSU ribosomal protein l25p [Oceanithermus profundus DSM 14977] gi|313153539|gb|ADR37390.1| LSU ribosomal protein L25P [Oceanithermus profundus DSM 14977] Length = 212 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E KL A R+ LR+ G++P I+Y N + K + + + K + I Sbjct: 2 EYKLKAYYRESEKPKV---LRREGKLPGIMY-NKNVNKKLYVHLGEFDKVFRNAGVHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 E V + + QLD H DF +++G T+ ++V ++F+ E K G+K G Sbjct: 58 TLELPDGETVDTVVRQVQLDKRRRRPEHVDFYVLTKGQTLDMYVNLKFVGEAK--GVKLG 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+ ++ + NIP I VD+++L+IGD +H D+ LPE ++ +AT+ Sbjct: 116 GVLSTPLTDLEVRVLPRNIPGFIEVDVSELEIGDVLHASDLALPEGVELLTDPEAVVATV 175 Query: 185 VAP 187 V P Sbjct: 176 VPP 178 >gi|256545294|ref|ZP_05472658.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] gi|256398975|gb|EEU12588.1| 50S ribosomal protein L25 (general stress protein CTC) [Anaerococcus vaginalis ATCC 51170] Length = 215 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 5/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L++ R+ VGK LR+ +P ++Y + + +++D K S+ T Sbjct: 1 MADIVLNSEKREAVGKNKVNKLRQQAIVPGVVYAKDKENINVQFTSRDFEKV-LSQAGTT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+ LDI E V V+ KDYQ+ P H DF ++ + V VPV + Sbjct: 60 TIIDLDIDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLNGRDDIR--V 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHME--DIRLPEKTSSMSQLNIT 180 + L V + C IP +++ D++IGDS + DI E + + + + Sbjct: 118 EPSVLVQNIDSVEVECLPMYIPQYAELEVTDMQIGDSFTVADFDIAKDENINILLEEDEV 177 Query: 181 IATIVAP 187 + ++ P Sbjct: 178 VCSLQEP 184 >gi|51893432|ref|YP_076123.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153113|sp|Q67M16|RL252_SYMTH RecName: Full=50S ribosomal protein L25 2; AltName: Full=General stress protein CTC 2 gi|51857121|dbj|BAD41279.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 194 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 4/186 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-FMTTI 64 +L A R G ++R LR+ G +P IIYG +P +++ + + + + + Sbjct: 1 MQLEATPR-GTGSRASRRLRQAGFVPGIIYGPGVEPLAVSVRSTQLERLVERQGRGHLIH 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + ++ V+ K Q D ++ + H DFLQV T+T+ VP+ + E ++G Sbjct: 60 VQVEGEANPRQVVIKQLQRDILTQQVTHVDFLQVDMNRTITLTVPIVVVGEE--QARRRG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + EV + C IP+++T+D++ L + + P + + + + Sbjct: 118 LLITHELDEVEVECRPTEIPEAVTLDVSGLTEPGPVTAASLSAPPGVRVLEDPDTVVVSC 177 Query: 185 VAPISG 190 G Sbjct: 178 TVIGGG 183 >gi|332298401|ref|YP_004440323.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] gi|332181504|gb|AEE17192.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168] Length = 185 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 92/186 (49%), Gaps = 2/186 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++AV R + GK A+ LR+NG++PA++Y + + + + + +K S T Sbjct: 1 MDQLVVNAVTRTETGKRVAKKLRENGRLPAVMYNSKGEAVMLDIDEVEFTKVWKSATPTT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + GK V KD + D +D +HADF + + V ++ + G++ Sbjct: 61 LVNLKLDGKSDNLVFIKDTEYDIKTDRNLHADFHAID--EKKALKVTMKVLLSGNPAGVR 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L ++++ C N+P +T D++ L +G ++D+ L ++ + +S +A Sbjct: 119 EGGFLTTHQSQITIQCLPKNLPIRVTADISGLGVGQVFRVKDLGLAKEITVLSDPEAALA 178 Query: 183 TIVAPI 188 ++ AP Sbjct: 179 SVSAPR 184 >gi|91217230|ref|ZP_01254191.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] gi|91184573|gb|EAS70955.1| putative ribosomal L25p family stress protein [Psychroflexus torquis ATCC 700755] Length = 206 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P +IYG + + +A ++S Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGEVPCVIYGGDNI---VHFAASEVSFNKLIYTPDV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +DI + +D Q PV+D ++H DF + SEG +T+ +PV +E G+K Sbjct: 58 HTVVVDIDGNKTTAVLQDIQFHPVTDDILHIDFYEFSEGQEITMEIPVH--SEGSPKGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + A N+PD I D+ LKIG +++ + E M N I Sbjct: 116 NGGVLRFNLRRMMVRGLAKNLPDFILADVTPLKIGQKMYVTAVA-NEGYKIMHPDNTVIC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|261880168|ref|ZP_06006595.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] gi|270333139|gb|EFA43925.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361] Length = 217 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-----KPIALSAKDISKRLYS 57 KE L+ R +GK +++ LRK G IP +YG + K++ K +Y+ Sbjct: 1 MKEISLTGKKRVDLGKKASKTLRKEGLIPCNLYGEAKENGKPVATAFVSPFKELRKLIYT 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++LD + I K+ Q PV+D +H DF +V++ +T+ +PV+ + Sbjct: 61 PHIYVIKISLDGEEHT--AIMKEIQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLV--GL 116 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G++ GG++N+ ++ + P IP+ + +D++ L IG SI + D+ E + Sbjct: 117 AQGVRDGGRMNLSIRKIEVTAPYQQIPEHLDIDVSKLTIGKSIRVGDLSY-EGLKYATSK 175 Query: 178 NITIATI 184 N+ I +I Sbjct: 176 NVVICSI 182 >gi|156741060|ref|YP_001431189.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus castenholzii DSM 13941] gi|226736357|sp|A7NI71|RL25_ROSCS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|156232388|gb|ABU57171.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Roseiflexus castenholzii DSM 13941] Length = 218 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 4/186 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K LS R VGK + LR++G +PA +YG +P + + A+ + Sbjct: 1 MSEK-YTLSLEPRAVVGKK-VKRLRRSGILPATVYGKGIEPISVQVDARSFNAVYRRAGR 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + G++ + Q PV+ +IHADF V V V VP+ I Sbjct: 59 TALVELHIAGRQPLAAFIHALQRHPVTRDIIHADFRAVDLSQEVEVAVPLH-IEGESPLV 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQLNI 179 LN V + + + +NIP +TVD++ L D SIH+ D+ LP + + + Sbjct: 118 ESGEAVLNQVLNAIEIRALPSNIPAHLTVDISGLDAFDKSIHVRDLALPPGVTLATPGDE 177 Query: 180 TIATIV 185 + ++ Sbjct: 178 LVVSLA 183 >gi|227876326|ref|ZP_03994439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269976098|ref|ZP_06183097.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|306817217|ref|ZP_07450964.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] gi|227843099|gb|EEJ53295.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mobiluncus mulieris ATCC 35243] gi|269935691|gb|EEZ92226.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris 28-1] gi|304650019|gb|EFM47297.1| 50S ribosomal protein L25 [Mobiluncus mulieris ATCC 35239] Length = 208 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K L R + GKG AR R N QIPA++YG+ +DP + L D + Sbjct: 1 MAEKHI-LKVSERTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTFLLVKDN-- 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L+ K+ V+ KD Q PV L+H D L V V V VPV + E Sbjct: 58 PNAVISLEGLKKPAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGEPAVGT 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + L+ V +L P +IP++I V+++ ++ G+ + + +++LP +++ Sbjct: 118 VANLDLLH-----VEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETV 172 Query: 181 IATIVAP 187 + ++ P Sbjct: 173 VLSVAVP 179 >gi|116626137|ref|YP_828293.1| 50S ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] gi|116229299|gb|ABJ88008.1| LSU ribosomal protein L25P [Candidatus Solibacter usitatus Ellin6076] Length = 227 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 2/186 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K+ + A +R+ GK AR R G IPA++YG +P +A+S +DI K + S + Sbjct: 1 MIKDITVPAEIRNSRGKNEARRTRMAGNIPAVVYGAYQEPVSVAVSPRDIVKIIRSNTGL 60 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 TI TL I G E V+ D Q+DP+ L+HADF +V + V VP F + Sbjct: 61 NTIFTLAIAGGETTPVMIVDRQVDPIKSTLLHADFKRVDLTKRIRVSVP-VFTEGEPAGV 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 QGG L ++ + + C ++IP+ V++++L IG S D+ L +S Sbjct: 120 KVQGGLLEIISRAIEIECLPDDIPEKFVVNVSELMIGQSKRGSDVALSGSMKLVSDPQTV 179 Query: 181 IATIVA 186 IA IVA Sbjct: 180 IAHIVA 185 >gi|325105366|ref|YP_004275020.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] gi|324974214|gb|ADY53198.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145] Length = 196 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR +G++PA++YG I + + R + Sbjct: 1 MKTIAISGSSRENVGKRDAKELRYDGKVPAVLYGGKEQ---IHFAVDAPALRDLVYSADV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L++ I +D Q P+++ ++H DFLQ+ + +T+ +PV+ SPG+K Sbjct: 58 HFAELEVNGSKYKAILQDIQFHPLTEKILHVDFLQLFDDKKITMEIPVKLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P + V L L++G S + D++ PE + TI Sbjct: 116 VGGKLVQKLRKLKVNALPKDMPQYVEVSLEPLEVGKSTRVRDLK-PEGYLITNVGEDTIV 174 Query: 183 TIVAPIS 189 +++ + Sbjct: 175 SVIMSRA 181 >gi|314932723|ref|ZP_07840093.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] gi|313654553|gb|EFS18305.1| ribosomal protein L25, Ctc-form [Staphylococcus caprae C87] Length = 219 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 4/182 (2%) Query: 7 KLSAVMRDKVGK-GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTCSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVPVHLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + ++ + NIP+SI VD+++L+I DS + D+++ + + +I T+V Sbjct: 120 VVEQPLFDLEVSATPENIPESIEVDISELQINDSFSVADVKITGDFTIENDPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001] Length = 204 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R+ G +P +IYG +P IA+ + I K + + + + + + + + + +D QL Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIIKGIQASGWRSRVYEIKVDGKAERALVRDVQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PV D +H DFL+++ GS V V V V F NE PGIK+GG LNVV H + + PA+NIP Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIVAPI 188 + TVDL+ L I D++ ED++ + ++ + N +A+I AP Sbjct: 144 EFFTVDLSKLDIADNVRWEDVQGTAGVTPLTHEENFVVASIAAPS 188 >gi|282881840|ref|ZP_06290493.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] gi|281298332|gb|EFA90775.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B] Length = 210 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 5/183 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R + GK LR G +P +IYG +P ++ I K + I+ + Sbjct: 4 LKLSSRKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVSGHENVILKLFQEV-GTSVIIEV 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + V+ K+ Q+ P + ++H D ++ +TV VPV I ++ Sbjct: 63 EIDGQKTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRDEIKVQPSNLI- 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 V +EV + C +P + V++ D++IGD+I + D+ + E + + +AT+ Sbjct: 122 -QVINEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALEADEVVATLS 180 Query: 186 API 188 AP Sbjct: 181 APR 183 >gi|332883267|gb|EGK03550.1| 50S ribosomal protein L25 [Dysgonomonas mossii DSM 22836] Length = 192 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 K +L R +GK + + RK +IPA+IYG + ++ D+ K +Y+ Sbjct: 1 MKTFELKGEARTDLGKKATKAFRKEDKIPAVIYGGDQTEAIAFTVTNSDVRKLIYTPEIF 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L IGK+ I KD Q+ PV+D ++H DFL V EG + + VPV + + G+ Sbjct: 61 --LVNLTIGKDSYKAILKDVQVHPVTDAILHLDFLHVFEGKPIVMDVPVIL--DGLAEGV 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GGKL++ ++ + + IP+ + VD+ L +G SI + ++ E ++ N + Sbjct: 117 KAGGKLSLDLRKIKVKALYDKIPEKVHVDVTSLALGKSIQVGELHF-EGLELLNAKNAVV 175 Query: 182 ATIVAPISG 190 + + Sbjct: 176 CRVQLTRAA 184 >gi|16077120|ref|NP_387933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221307862|ref|ZP_03589709.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. 168] gi|221312184|ref|ZP_03593989.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317117|ref|ZP_03598411.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. JH642] gi|221321380|ref|ZP_03602674.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis subsp. subtilis str. SMY] gi|321313722|ref|YP_004206009.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] gi|585017|sp|P14194|CTC_BACSU RecName: Full=General stress protein CTC; AltName: Full=50S ribosomal protein L25 gi|467441|dbj|BAA05287.1| expressed at the end of exponential growyh under condtions in which the enzymes of the TCA cycle are repressed [Bacillus subtilis] gi|2632319|emb|CAB11828.1| ribosomal protein Ctc, binding 5S RNA [Bacillus subtilis subsp. subtilis str. 168] gi|291482424|dbj|BAI83499.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. natto BEST195] gi|320019996|gb|ADV94982.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus subtilis BSn5] Length = 204 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNAVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ E V+ D Q DP+ + + HADF V+ + V VP+ ++ G+K GG Sbjct: 62 LEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLT--GEAIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|327399267|ref|YP_004340136.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] gi|327181896|gb|AEA34077.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411] Length = 195 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 ++A RD +G +A+ LR+ G+IPA+IYG + IA+ + + ++ L Sbjct: 3 ITAQKRD-IGTKAAKKLRREGKIPAVIYGADFGSEHIAVDRSEFMAAIR-RSRRNDRFEL 60 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + E VI K+ Q PV + + H DF +++EG VTV V +S G+K GG L Sbjct: 61 KLDNEEFKVIVKEIQWHPVKEEVEHVDFYKLTEGRPVTVD--VPVRVVGESKGVKMGGDL 118 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ IP+ I +D+ +L+IGD +H+ D+ +PE S N T+ I+ Sbjct: 119 YQPRKRITVEALPEAIPNEIEIDVTNLQIGDVVHVFDLDMPEGVRVKSSKNFTLVAIL 176 >gi|261405174|ref|YP_003241415.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] gi|261281637|gb|ACX63608.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. Y412MC10] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + K + LR +G+IPA+++G + I LSAK+ K + L Sbjct: 3 VNLRAEARAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGKWARNGKGGILEL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + +E + V+ + Q DPV+ IH DFL+++ V V + +I K G K GG Sbjct: 63 HFE-DREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIGTAK--GAKSGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + V + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++V Sbjct: 120 VVQIQSTFVEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSVV 179 Query: 186 API 188 P Sbjct: 180 TPK 182 >gi|146296817|ref|YP_001180588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166223670|sp|A4XKG2|RL25_CALS8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145410393|gb|ABP67397.1| LSU ribosomal protein L25P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 203 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R+ K + LRK G IPA+ YG+ P +S K+ K K + + + Sbjct: 5 LVYNKRETFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYKQK-GLAGKIKI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + K+ Q V +IH DF +SE + V VP+ F N +G L Sbjct: 64 LIDGKERTALIKEVQTHYVKGNIIHVDFQILSENKPIYVEVPIVFENAEILKS--RGLVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + + +I + DI+LPE L+ +A I Sbjct: 122 QRQIDTVEIEGLPKDIPEHLVIDLMEYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|239637487|ref|ZP_04678461.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] gi|239596932|gb|EEQ79455.1| ribosomal protein L25, Ctc-form [Staphylococcus warneri L37603] Length = 220 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LR G++PA++YG + + + + K + + Sbjct: 2 TSLKSIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+G Sbjct: 61 IELGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLV--GEAVGAKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+ Sbjct: 119 GVVEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVSDIKVSGDFTIENEPEDSIVTV 178 Query: 185 VAP 187 V P Sbjct: 179 VPP 181 >gi|319399658|gb|EFV87912.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis FRI909] Length = 219 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + NIP++I VD+++L++ DS+ + D+++ + + +I T+V Sbjct: 120 VVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDVKISGDFTIENDPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|183984442|ref|YP_001852733.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] gi|183177768|gb|ACC42878.1| 50S ribosomal protein L25 RplY [Mycobacterium marinum M] Length = 214 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 8/191 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + L +R + GKG++R R+ G++PA++YG+ +P+ + L A D + L + Sbjct: 1 MAKAAVNQLVVTVRTETGKGASRRARREGKVPAVMYGHGEEPRHLELPAHDYAAVLR-NS 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI E + K + P+ + HAD + V G V V V V + Sbjct: 60 GTNAVLTLDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEGDAAPG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + + A +IP+ +TV + ++ G I LP +S + Sbjct: 120 TL-----VTQEANTIEIEAEAMSIPEQLTVSIEGVEPGTQFTAGQIELPAGVGLISDPEM 174 Query: 180 TIATIV-APIS 189 + +V AP + Sbjct: 175 LVVNVVTAPTA 185 >gi|40219|emb|CAA34524.1| unnamed protein product [Bacillus subtilis] Length = 186 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 3/181 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+A R + S R +R +G +P IIYG + KP++L + ++ K L + ++T Sbjct: 3 TLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNAVIT 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 L++ E V+ D Q DP+ + + HADF V+ + V VP+ ++ G+K GG Sbjct: 62 LEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLT--GEAIGVKNGGV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 L + +++ IP +I D++ L + + + + D+ S + + +A+I+ Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILP 179 Query: 187 P 187 P Sbjct: 180 P 180 >gi|118619723|ref|YP_908055.1| 50S ribosomal protein L25/general stress protein Ctc [Mycobacterium ulcerans Agy99] gi|118571833|gb|ABL06584.1| 50S ribosomal protein L25 RplY [Mycobacterium ulcerans Agy99] Length = 214 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 8/191 (4%) Query: 1 MDQKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M + L +R + GKG++R R+ G++PA++YG+ ++P+ + L A D + L + Sbjct: 1 MAKAAVNQLVVTVRTETGKGASRRARREGKVPAVMYGHGAEPQHLELPAHDYAAVLR-NS 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +LTLDI E + K + P+ + HAD + V G V V V V Sbjct: 60 GTNAVLTLDIAGEEQLALTKALDIHPIRRTIQHADLVVVRRGEKVVVEVSVAVEGHAAPG 119 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + + + + + A +IP+ +TV + + G I LP +S + Sbjct: 120 TL-----VTQEANTIEIEAEAMSIPEQLTVSIEGAEPGTQFTAGQIELPAGVGLISDPEM 174 Query: 180 TIATIV-APIS 189 + +V AP + Sbjct: 175 LVVNVVTAPTA 185 >gi|120437821|ref|YP_863507.1| 50S ribosomal protein L25/general stress protein Ctc [Gramella forsetii KT0803] gi|166223685|sp|A0M745|RL25_GRAFK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|117579971|emb|CAL68440.1| 50S ribosomal protein L25 [Gramella forsetii KT0803] Length = 220 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 4/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR GQ+P ++YG DP A +Y+ + T Sbjct: 1 MKSITINGSKRESVGKKATKALRNAGQVPCVLYGVEGDPLHFAAEEISFKNLVYTPDVHT 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G+ I +D Q P++D ++H DF Q+ +T+ +P+ + G+K Sbjct: 61 VKIKLKSGE-SYDAILQDIQFHPLTDAILHIDFYQIFGEKPITMEIPIHTE--GVARGVK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + ++PD I +++ LKIG +++ + + N I Sbjct: 118 NGGVLRYNLRRLKVRGLPADLPDYIVANVSKLKIGQKLYVTGVD-SKDFVIQHPDNTVIC 176 Query: 183 TI 184 + Sbjct: 177 QV 178 >gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM] Length = 193 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 2/163 (1%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P I++G ++P PI + ++ KRL + F +T+ L + G+E V VI +D Q D V Sbjct: 1 MVPGIVFGGDAEPLPINIPFNELFKRLKAGRFKSTLFNLKVEGQEDVRVICRDVQRDVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H D +++ + + + +P+ F NE + P IK+GG L V +E+ L+ A +IPD+I Sbjct: 61 DLPTHLDLMRLRRTTKINLFIPLDFTNEEECPAIKKGGVLTTVRNEIELIVTAGDIPDAI 120 Query: 148 TVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 VDL ++ IGD+I + I LP+ + + I + AP S Sbjct: 121 EVDLTKIENIGDTITISMIDLPKGAKPTIERDFVICNVSAPSS 163 >gi|307701513|ref|ZP_07638531.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] gi|307613305|gb|EFN92556.1| ribosomal protein L25, Ctc-form [Mobiluncus mulieris FB024-16] Length = 208 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K L R + GKG AR R N QIPA++YG+ +DP + L D + Sbjct: 1 MAEKHI-LKVSERTEFGKGFARRARMNDQIPAVVYGHGADPVHVVLPYHDTFLLVKDN-- 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +++L+ K+ V+ KD Q PV L+H D L V V V VPV + E Sbjct: 58 PNAVISLEGLKKPAMVLVKDIQRHPVKRSLMHLDLLLVKADEKVNVEVPVVIVGEPAVGT 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + L+ V +L P +IP++I V+++ ++ G+ + + +++LP +++ Sbjct: 118 VANLDLLH-----VEVLAPVVDIPETIEVNVDGMQDGEVLLVSEMKLPAGVEAVTDGETV 172 Query: 181 IATIVAP 187 + ++ P Sbjct: 173 VLSVAVP 179 >gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. BTAi1] gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1] Length = 201 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 99/156 (63%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 IYG+ P PI++ +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH Sbjct: 2 IYGDNQPPLPISVEDRELRQRILAGRFLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIHV 61 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLND 153 DF+++ +G+T+ V VP+ + +PG+K+GG +N+V H + L C A NIP I D++ Sbjct: 62 DFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVSA 121 Query: 154 LKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 L+I S+H+ D++LP ++S+ + T+ TIV P Sbjct: 122 LEINHSLHISDVKLPTGVKTLSREDATLVTIVPPSG 157 >gi|294787655|ref|ZP_06752899.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] gi|294483948|gb|EFG31631.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453] Length = 188 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 5/182 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A +R + G G++R LR + ++PA++YG + K I + K++ L ++F T +L L Sbjct: 4 IQATIRSEQGTGASRRLRHDSKVPAVVYGLG-ETKAITVDHKEMFYALQKESFFTQVLKL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI-KQGGK 126 +I + VI +DYQ+ PV + H DF + V + +P+ N S + Q G+ Sbjct: 63 NIDGKEQDVIVRDYQMHPVKRQVQHIDFQAIDINQPVRIKLPIHIKNAEISHAVKMQAGR 122 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIAT 183 ++++ V L NIP ++ +D + GD +H+ D PE S++ N+ +AT Sbjct: 123 VSLLVTVVDCLVDPKNIPAALELDCAKVVAGDILHLSDFVYPEGVQSIALKRNSNLAVAT 182 Query: 184 IV 185 + Sbjct: 183 VT 184 >gi|256828485|ref|YP_003157213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] gi|256577661|gb|ACU88797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfomicrobium baculatum DSM 4028] Length = 196 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 6/192 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSK 58 E L R++ GKG LR NG +P + Y + + + K Sbjct: 1 MSEVTSLQLTPREERGKGPCSRLRSNGLVPGVFYNAKGENISFVVENLALGKAFEKVRYS 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + +D + + + K PV H DF+ + V V +PV + K Sbjct: 61 KMIELQIEVDGQLQTRNALFKKLVKHPVKRRYDHVDFIGIDLDKEVQVTIPVETVGRAK- 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+ GGKL ++ V + C IPDS+ V++ +L+IG + ++ + LPE ++ N Sbjct: 120 -GVVLGGKLEILEERVMVRCLPTAIPDSVVVEVTELEIGGKVLVDQLVLPEGVKAVYDRN 178 Query: 179 ITIATIVAPISG 190 + I Sbjct: 179 FPVIAIQTARGA 190 >gi|150387891|ref|YP_001317940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947753|gb|ABR46281.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 204 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 4/186 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K L + +R++ G ++ R G +PA+IYG + + + ++ + ++ Sbjct: 1 MMKN-SLVSSLRNETGSNASHRSRDLGNVPAVIYGKSINTLTVEIERTEVEAFVRNQGGK 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ +++G + K+ Q DPV+ +++H DF QV++ + VP+ Sbjct: 60 -GLVQVNVGGQPYTTFVKEMQRDPVTGMIMHVDFQQVNQDEQIHTMVPIILKGRGFVE-- 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K G + E+ + C A +IP+ D+++ + GD++ + D+ E+ S ++ L I Sbjct: 117 KGGVTVQQQVRELEVQCFAGSIPEKFEFDISNFRPGDTLKVSDVEFGEEVSIINNLESVI 176 Query: 182 ATIVAP 187 A+I P Sbjct: 177 ASIATP 182 >gi|289704880|ref|ZP_06501297.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] gi|289558376|gb|EFD51650.1| ribosomal protein L25, Ctc-form [Micrococcus luteus SK58] Length = 212 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N Sbjct: 1 MS-DQLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNA 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T++ V+PKD Q + D + H D ++V G V + Sbjct: 60 LLTVVNEAGE--EHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVV-----VEVTVQVEGE 112 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + G + + V + A ++P+++T+ + + GD ++ D+++P + + +I Sbjct: 113 VAPGTEYVLDYVTVPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIV 172 Query: 181 IATIV 185 IAT+ Sbjct: 173 IATVS 177 >gi|251809807|ref|ZP_04824280.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|293366143|ref|ZP_06612830.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] gi|251806675|gb|EES59332.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis BCM-HMP0060] gi|291319737|gb|EFE60096.1| 50S ribosomal protein L25 [Staphylococcus epidermidis M23864:W2(grey)] Length = 223 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 98/188 (52%), Gaps = 4/188 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M+ + L +++R K + + LR +G++PA++YG + + + + K + Sbjct: 1 MEIRMASLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV- 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ Sbjct: 60 GRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAV 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + NIP++I VD+++L++ DS+ + DI++ + + Sbjct: 118 GAKEGGVVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPED 177 Query: 180 TIATIVAP 187 +I T+V P Sbjct: 178 SIVTVVPP 185 >gi|222054664|ref|YP_002537026.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] gi|254801049|sp|B9M5U4|RL25_GEOSF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221563953|gb|ACM19925.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp. FRC-32] Length = 196 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L+ +R K GKG +R LR++ IP ++YG + ++L K++S + + Sbjct: 1 MDQRILNVELRSKTGKGISRQLRRSESIPGVVYGKGIESVSVSLKTKELSNAIAGEGGRN 60 Query: 63 TILTLDIGKEL--VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ILTL G L VI D D + + +H D +++ + V V V + + G Sbjct: 61 HILTLKGGGSLDGQMVIVADLLQDSLKGLPLHVDLHKINLADKIKVKVKVNLV--GTAAG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+ HE+ + C ++IP+ + VD+ L +G SIH+ D++ + + Sbjct: 119 VKEGGLLDFAMHEIEIECLPSHIPEHLDVDVTSLTLGHSIHIGDLKELPGIKVLGDPKAS 178 Query: 181 IATIV 185 I +++ Sbjct: 179 IISVL 183 >gi|27469200|ref|NP_765837.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis ATCC 12228] gi|71153665|sp|Q8CQU8|RL25_STAES RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|27316749|gb|AAO05924.1|AE016751_219 50S ribosomal protein L25 [Staphylococcus epidermidis ATCC 12228] Length = 219 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 120 VVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|239917085|ref|YP_002956643.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|281414453|ref|ZP_06246195.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] gi|259646691|sp|C5C9D7|RL25_MICLC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239838292|gb|ACS30089.1| ribosomal protein L25, Ctc-form [Micrococcus luteus NCTC 2665] Length = 207 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + K+ R GKG+AR R+ G IPA++YG+ +P + L A++ + + + N Sbjct: 1 MS-DQLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNA 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + T++ V+PKD Q + D + H D ++V G V + Sbjct: 60 LLTVVNEAGE--EHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVV-----VEVTVQVEGE 112 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + G + + V + A ++P+++T+ + + GD ++ D+++P + + +I Sbjct: 113 VAPGTEYVLDYVTVPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIV 172 Query: 181 IATI 184 IAT+ Sbjct: 173 IATV 176 >gi|254424497|ref|ZP_05038215.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] gi|196191986|gb|EDX86950.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335] Length = 216 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 103/190 (54%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R K + LR+ G +PA++YG+ ++ P+ LS D L + + Sbjct: 2 DLSIECAQRAPEDK--PKRLRREGTLPAVLYGHDGANSLPLKLSNYDAEALLRKASVNKS 59 Query: 64 ILTLDIG--KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++T+++ VI ++ Q P + L H F ++ S + V +P+ F+ + Sbjct: 60 VITVNVPDVPWSGKVILREVQKHPWKNKLHHLSFFSIASQSEIEVSMPINFVG-DAVGVT 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG L+ V E+ L CP + IP S+ VD+++LKIGD++H+ +I+LP+ TS + ++ + Sbjct: 119 DEGGTLDTVMTEIQLKCPPDAIPQSLDVDVSELKIGDALHVGEIKLPKGTSVTVEPSLLV 178 Query: 182 ATIVAPISGS 191 +++AP + + Sbjct: 179 VSVLAPRTAA 188 >gi|315223765|ref|ZP_07865615.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] gi|314946340|gb|EFS98339.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287] Length = 199 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + + I +D Q DPVSD +IH DF Q+ + +T+ VP++ SPGI Sbjct: 60 AAIELNG--KTYNAILQDIQFDPVSDKIIHIDFYQLQKDKEITIEVPIQIE--GTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + VD++ L++G+ +++ + + M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYVTKLAQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|149369577|ref|ZP_01889429.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] gi|149357004|gb|EDM45559.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified eubacterium SCB49] Length = 204 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R+ VGK + + LR G++P ++YG + PI SA +++ Sbjct: 1 MKSITINGSQRESVGKKATKALRDAGKVPCVVYGGEA---PIHFSADELAFSKLVYTPDV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ + V I +D Q PV+D ++H DF Q+S+ V + +PVR S G++ Sbjct: 58 HTVVIELDGKKVDAILQDIQFHPVTDRILHIDFYQISDDKEVMLEIPVRIT--GNSRGVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + N+PD I VD+ ++KIGD +++ +K + + N I Sbjct: 116 NGGTLRIVSRKLRVKAIPANLPDVIEVDITEMKIGDKLYVTA-AANDKFTILHSDNEVIC 174 Query: 183 TIVAPISG 190 + + Sbjct: 175 QVRTSRTA 182 >gi|256820643|ref|YP_003141922.1| 50S ribosomal protein L25/general stress protein Ctc [Capnocytophaga ochracea DSM 7271] gi|256582226|gb|ACU93361.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Capnocytophaga ochracea DSM 7271] Length = 199 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK +++ LR GQ+P ++YG + + +Y+ N T Sbjct: 1 MKSITIKGSQRESVGKAASKALRNAGQVPCVLYGGD-NVLHFSAPELAFKNIVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ + + I +D Q DPVSD +IH DF Q+ + +T+ VP++ SPGI Sbjct: 60 AAIELNG--KTYNAILQDIQFDPVSDKIIHIDFYQLHKDKEITIEVPIQIE--GTSPGIM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + +N+PD + VD++ L++G+ +++ + + M N + Sbjct: 116 AGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLYVTKLAQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|254486127|ref|ZP_05099332.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] gi|214042996|gb|EEB83634.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101] Length = 186 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Query: 29 QIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVS 87 +P I++G DP PI L + +L + F T+ + + G + V VI +D Q V Sbjct: 1 MVPGIVFGGDVDPLPINLDFNKLLTKLRAGRFKATLFNMKVEGHDDVRVICRDVQRHVVK 60 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D+ H DF+++ + + + + V E + PG+K+GG L +V EV L+ A +IPD I Sbjct: 61 DLPTHVDFMRLKRTTKINLFIQVEVSGEEECPGLKKGGVLTLVRPEVELVVTAGDIPDHI 120 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 TVD++ L+IGDS + ++ LPE + + + IA + AP Sbjct: 121 TVDISGLQIGDSATIANVVLPEGSKPVIDRDFVIAQVSAPSG 162 >gi|227499767|ref|ZP_03929867.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] gi|227218153|gb|EEI83419.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus tetradius ATCC 35098] Length = 215 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R+ GK LR N +P +IY + + ++A+D K L + + Sbjct: 1 MADIVLQAQKREATGKNKVNKLRANELVPGVIYAKDEENINVQVTARDFEKVLR-QAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TLDI E V+ K YQ P + +H DF +++ + V VPV + + + Sbjct: 60 TIITLDIDGENKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLVGRDDI--VV 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNIT 180 + L V + C IP + V++ DL+IGD + D+ + + + + + Sbjct: 118 EPSVLVQNIDVVEVECLPKFIPQTAEVEVKDLQIGDVRTIADLDIFKNADITILEEEDAV 177 Query: 181 IATIV 185 I ++ Sbjct: 178 ICSLQ 182 >gi|329723963|gb|EGG60488.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU144] Length = 219 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 120 VVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|57866045|ref|YP_187735.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus epidermidis RP62A] gi|282875431|ref|ZP_06284303.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|68053030|sp|Q5HRQ4|RL25_STAEQ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57636703|gb|AAW53491.1| ribosomal protein L25 [Staphylococcus epidermidis RP62A] gi|281295788|gb|EFA88310.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis SK135] gi|329733030|gb|EGG69369.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU028] gi|329737904|gb|EGG74132.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU045] Length = 219 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR +G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRNSGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV V V+ + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMSEERTVEVQVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + NIP++I VD+++L++ DS+ + DI++ + + +I T+V Sbjct: 120 VVEQPLFNLEVTATPENIPETIEVDISELQVNDSLAVSDIKISGDFTIENNPEDSIVTVV 179 Query: 186 AP 187 P Sbjct: 180 PP 181 >gi|288574798|ref|ZP_06393155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570539|gb|EFC92096.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 207 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 +L+ RD VGK + LR++G IPA++YG + + + A+D + ++ Sbjct: 1 MDLVRLNLEKRDAVGKEACGRLRRSGYIPAVLYGPDYREAVSVQVKAEDFLPNIRGTHWN 60 Query: 62 TTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T + I +D + VSD ++H DF Q+ +G V+V VP+ + + G Sbjct: 61 TLKFDAVLPDGSSEMCIIRDMNRNYVSDDVLHVDFYQLVKGHKVSVKVPIEIVGKETCAG 120 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K GG L ++ + IP+++ +++ + +GDSI + D+ LPE + Sbjct: 121 VKAGGLLEQRILDIEINVLPREIPENVVLNVESMNVGDSITLADLDLPESAEMDKDPSEI 180 Query: 181 IATIV 185 + +V Sbjct: 181 VVEVV 185 >gi|313674668|ref|YP_004052664.1| LSU ribosomal protein l25p [Marivirga tractuosa DSM 4126] gi|312941366|gb|ADR20556.1| LSU ribosomal protein L25P [Marivirga tractuosa DSM 4126] Length = 214 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK A+ LR +PA++YG I A I R Sbjct: 1 MKTVEIIGYKRANLGKKEAKRLRAEAMVPAVLYGGDEQ---IHFYAPMILFRPLVFTAEA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++I + I +D PVS+I++HADFLQ+ +G + +++PV +PG+ Sbjct: 58 HFVNINIEGDEYQAILQDVAFHPVSEIILHADFLQLHKGKNIKMNIPVHLE--GTAPGVT 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L + + ++P+ IT+D++ L G SI +E + + E + +IA Sbjct: 116 KGGTLIHKRRSLLVKALPKDMPEHITLDISALDFGKSIKVESVSV-ENCEILDTPQASIA 174 Query: 183 TIVAPIS 189 + P + Sbjct: 175 VVEIPRA 181 >gi|258513562|ref|YP_003189784.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] gi|257777267|gb|ACV61161.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum acetoxidans DSM 771] Length = 219 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R+ GKG + L G +PA++Y KP+ L A+ + L SK +++ Sbjct: 11 SLDAYPREGCGKGYSNKLFSKGYMPAVLYSKSIGSKPLELEARALEDVLKSKTGRNSVID 70 Query: 67 LD----IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G++ V+ KD Q P+ +HADFL++S V + V + + Sbjct: 71 LHLKSGDGEDSYKVMVKDLQYHPIRRSYLHADFLEISLTDRVQIAAKVVLVG-EAPGVAE 129 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L+ + EV + C +IPD ITVD++ L IGDS+ + D++ ++ ++ +A Sbjct: 130 EGGILDQIIREVGVKCLPGSIPDIITVDVSKLYIGDSVAVMDLQAGPDIEILADEDLVVA 189 Query: 183 TIVAPIS 189 ++ P S Sbjct: 190 RVIPPQS 196 >gi|330686084|gb|EGG97706.1| ribosomal protein L25, Ctc-form [Staphylococcus epidermidis VCU121] Length = 220 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L +++R K + + LR G++PA++YG + + + + K + + Sbjct: 2 TSLKSIIRQGKQTRSDLKQLRNAGKVPAVVYGYGTKNTSVKVDEVEFIKVIREV-GRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+G Sbjct: 61 IELGVGSKSIKVMVSDYQYDPLKNQITHIDFLAINMTEERTVEVPVQLV--GEAVGAKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + + + +NIP+ I VD+ +L I DS + DI++ + ++ +I T+ Sbjct: 119 GVVEQPLFNLEVTATPDNIPEVIEVDITELNINDSYSVADIKVSGDFTIENEPEDSIVTV 178 Query: 185 VAP 187 V P Sbjct: 179 VPP 181 >gi|169825682|ref|YP_001695840.1| 50S ribosomal protein L25 [Lysinibacillus sphaericus C3-41] gi|226736335|sp|B1HSV6|RL25_LYSSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|168990170|gb|ACA37710.1| 50S ribosomal protein L25 (General stress protein CTC) [Lysinibacillus sphaericus C3-41] Length = 198 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN Sbjct: 1 MSTV-LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSIQ-KNGQN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ +LD+ + V+V+ + Q + D + H DFL ++ + V VP++ I +S G+ Sbjct: 59 SVFSLDLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEVDVPIKLI--GQSVGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + Sbjct: 117 EGGILMQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRHQTPVEIISEDDYLLV 176 Query: 183 TIVAPISG 190 TIVAP+S Sbjct: 177 TIVAPVSA 184 >gi|329930032|ref|ZP_08283657.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] gi|328935431|gb|EGG31903.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5] Length = 191 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + K + LR +G+IPA+++G + I LSAK+ K + L Sbjct: 5 LRAETRAAMNKTGLKQLRLSGRIPAVVFGTGENNMMIQLSAKEFGKWARNGKGGILELHF 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + +E + V+ + Q DPV+ IH DFL+++ V V + +I K G K GG + Sbjct: 65 E-DREPIPVLLESVQRDPVTREYIHVDFLRININEVVRTRVNLDYIGTAK--GAKSGGVV 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + + + IP +I V+++ L+IG+S+H+ D++LP+ +S N + ++V P Sbjct: 122 QIQSTFIEIESFPDQIPATIPVEISRLEIGNSLHVGDLKLPDGVVPISSANELLVSVVTP 181 Query: 188 I 188 Sbjct: 182 K 182 >gi|319654945|ref|ZP_08009019.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] gi|317393370|gb|EFV74134.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2] Length = 216 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + LRK G IPA++YG+ + I LS D K + + +L Sbjct: 5 LQAKERKGSRNSNLTSLRKEGNIPAVVYGSKLHSQSIYLSEADFLKTIKEV-GRNGVFSL 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ V+ DYQ +P+ + ++HADFL V +T V V + G+K GG + Sbjct: 64 DVDGSKHEVVLGDYQSNPIKNEIVHADFLAVDMNKEMTADVRVVLT--GDAAGVKDGGVM 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 HEVS+ NNIP S+ VD+ +L++ +++ + DI+ ++ IA+I+ P Sbjct: 122 QQSMHEVSVTATPNNIPPSVEVDVTNLQVNETLTVADIKANRGYEINNEDEEVIASILPP 181 Query: 188 I 188 Sbjct: 182 R 182 >gi|302534901|ref|ZP_07287243.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] gi|302443796|gb|EFL15612.1| ribosomal protein L25, Ctc-form [Streptomyces sp. C] Length = 196 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 8/186 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ E KLSA +RD GKGSAR R++ P +IYG+ + PK + + A + L + N Sbjct: 1 MNMSEIKLSAKLRDSFGKGSARQSRRDALTPGVIYGHGTTPKHVGVEAHALMMALKTPN- 59 Query: 61 MTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +L+LDI G VI K Q P+ ++H DFL V +G VTV VPV + + Sbjct: 60 --ALLSLDIEGDGTELVISKAVQRHPLKRNILHVDFLIVQKGEKVTVEVPVVTEGDLAAG 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G L + E A +IP +TV + L+ G SIH +D+ LP T+ Sbjct: 118 GNLLETLLTTITVE----AEATHIPTEVTVSIEGLEAGASIHAKDLVLPAGTTLAVDGET 173 Query: 180 TIATIV 185 + +V Sbjct: 174 AVLQVV 179 >gi|312127690|ref|YP_003992564.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor hydrothermalis 108] gi|311777709|gb|ADQ07195.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor hydrothermalis 108] Length = 200 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L RD K + LRK G IPA+ YG+ P +S K+ K + K + + + Sbjct: 5 LVYNRRDVFTKSNLNRLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGKIKI 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + K+ Q +IH DF +SE + V VP+ F N +G L Sbjct: 64 SIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RGLVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 122 QRQMDTVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|257066620|ref|YP_003152876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] gi|256798500|gb|ACV29155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaerococcus prevotii DSM 20548] Length = 217 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A R+ GK LR IP +IY + + ++ +D K L + + Sbjct: 1 MAELVLQAEKREATGKNKVNKLRAAELIPGVIYAKDEENINVQVTTRDFEKVLR-QAGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI+TLD G E V+ K YQ P + +H DF +++ + V VPV + + Sbjct: 60 TIITLDFGDEKKDVLIKAYQNHPFKNQFLHVDFQAINQNEAIRVQVPVVLVGRD--EIRV 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 + L V + C IP + V+++DL+IGD + D+ + ++ + + + + Sbjct: 118 EPSVLVQNIDVVEVECLPKYIPQTADVEVSDLQIGDVRTIADLDIAKVDEITILEEDDEV 177 Query: 181 IATIV 185 I ++ Sbjct: 178 ICSLQ 182 >gi|254500889|ref|ZP_05113040.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] gi|222436960|gb|EEE43639.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11] Length = 176 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 1/158 (0%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 IYG+ PI + K+ + L+ F+T I T+D+ E VI KD+QL PV D ++H Sbjct: 2 IYGDKKPALPITIPVKETTLTLHKGGFLTHIGTIDVDGEKHQVIAKDFQLHPVRDDVLHV 61 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLND 153 DFL+VS +T+TV +PV FINE PG+K+GG LNVV H V L+ PAN IP+++ DL Sbjct: 62 DFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELIVPANAIPETLVFDLAK 121 Query: 154 LKIGDSIHMEDIRLPEKT-SSMSQLNITIATIVAPISG 190 + IGD++H+ LPE +++ + T+AT+ AP G Sbjct: 122 VDIGDTLHISATTLPEGAQPTITDRDFTVATLAAPGGG 159 >gi|126662578|ref|ZP_01733577.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] gi|126625957|gb|EAZ96646.1| 50S ribosomal subunit protein L25 [Flavobacteria bacterium BAL38] Length = 200 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + + +R G +P +IYG +P+ A + + + Sbjct: 1 MKSITIKGSERENVGKKATKAVRDAGMVPCVIYGG---NQPVHFVADERAFKDLVYTPNA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + +++ +VI +D Q PVSD ++H DF +S+ + + VPV+ SPG+ Sbjct: 58 HTVVIELNGASHNVIMQDIQFHPVSDKILHIDFFNLSDDKEIVMEVPVKIT--GTSPGVL 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + + N+PD + +++L++G+ +++ + M N + Sbjct: 116 LGGVLRLNQRRLKVKALPKNLPDFVEASISELQMGNKLYVTKLET-NNFKLMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|300774725|ref|ZP_07084588.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] gi|300506540|gb|EFK37675.1| 50S ribosomal protein L25 [Chryseobacterium gleum ATCC 35910] Length = 214 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR +P ++YG + P+ SA++ + + Sbjct: 1 MKSITIQGTKRESVGKKSTKALRDAELVPCVVYGGGA---PLNFSAEEKAFKGLVYTPEA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++++ + + + +D Q P++D ++HADF Q+S+ V + VPVR +K G+ Sbjct: 58 HTVSIEVDGKTIPAVLQDIQFHPITDKILHADFYQLSDDKPVIMEVPVRITGRSK--GVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD I VD+ L+IG+ +++ I+ E S M N + Sbjct: 116 AGGVLRQSFRKLKVKAIPANLPDEIVVDVTPLRIGNKLYIGGIKT-EGYSFMHPDNAVVV 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|83816854|ref|YP_444950.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] gi|109893393|sp|Q2S4D1|RL25_SALRD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|83758248|gb|ABC46361.1| 50S ribosomal protein L25 [Salinibacter ruber DSM 13855] Length = 250 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 7/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R+ G +AR +R N ++P ++YG + P+ + ++K +Y ++ Sbjct: 20 MDAPVIEAQPRE-TGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRSAPV 78 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++ + I KDY L P++D +HADF + EG VT+ VP+ + G + Sbjct: 79 AEVEMNGD--TWNCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYT--GIPVGQQ 134 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + E+++ NIP I VD+ +L IGDS+H+ D+ + + T+ Sbjct: 135 NGGDTQQIARELTISVLPENIPAQIEVDIGELVIGDSLHVYDLET--DYEIKTSRDQTLV 192 Query: 183 TIVAP 187 T+VAP Sbjct: 193 TVVAP 197 >gi|294506808|ref|YP_003570866.1| 50S ribosomal protein L25 [Salinibacter ruber M8] gi|294343136|emb|CBH23914.1| 50S ribosomal protein L25 [Salinibacter ruber M8] Length = 260 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 7/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R+ G +AR +R N ++P ++YG + P+ + ++K +Y ++ Sbjct: 30 MDAPVIEAQPRE-TGSKAAREIRNNDRVPCVLYGRTVESTPLQIPIAALNKLIYRRSAPV 88 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++ + I KDY L P++D +HADF + EG VT+ VP+ + G + Sbjct: 89 AEVEMNGD--TWNCILKDYDLHPLTDRPLHADFQALEEGDEVTLTVPLNYT--GIPVGQQ 144 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + E+++ NIP I VD+ +L IGDS+H+ D+ + + T+ Sbjct: 145 NGGDTQQIARELTISVLPENIPAQIEVDIGELVIGDSLHVYDLET--DYEIKTSRDQTLV 202 Query: 183 TIVAP 187 T+VAP Sbjct: 203 TVVAP 207 >gi|312135063|ref|YP_004002401.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor owensensis OL] gi|311775114|gb|ADQ04601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor owensensis OL] Length = 201 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LR+ G IPA+ YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDVFTKSNLNKLRREGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + KD Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKDVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENTEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMSYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|332703820|ref|ZP_08423908.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] gi|332553969|gb|EGJ51013.1| 50S ribosomal protein L25 [Desulfovibrio africanus str. Walvis Bay] Length = 207 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 7/193 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK-- 58 M + +LS R +VGKG R +R G +P I Y + P+ + ++K Sbjct: 1 MSNEN-QLSVEKRVRVGKGPVRDVRAEGFVPGIYYDAKGENIPVKVREVPLTKLYEKVGK 59 Query: 59 -NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + T + + V ++H DF V + V VPV K Sbjct: 60 AHVFTLKIESEGQITEKPVFIWQISRHAYKKQIMHVDFYGVDLNKPIRVMVPVNVT--GK 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQ 176 +PG+ GG + + ++ L C IP+++TVD++ + I D++H+ + LP+ ++ Sbjct: 118 APGLILGGVVQIFRDKIELECLPLEIPETVTVDVSSMNINDTVHISSLPLPQGVKAVYGD 177 Query: 177 LNITIATIVAPIS 189 N + +V P S Sbjct: 178 DNFAVVGVVPPAS 190 >gi|260893657|ref|YP_003239754.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] gi|260865798|gb|ACX52904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex degensii KC4] Length = 197 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 6/174 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +R GKG L G+IPA++YG P+ +S +D+ K L + ++ L Sbjct: 5 LVAQVRTGRGKGYRNRLAAQGKIPAVVYGKALGSVPVEVSLRDLKKVLGGETIKGKLIDL 64 Query: 68 ----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 D + + K+ Q +P++ LIH DF QVS VT VPV + G+K+ Sbjct: 65 KIVGDGWERQEKALVKEMQHNPLTGELIHVDFHQVSLTEEVTATVPVEL--SGEPVGVKK 122 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GG L EV + C +P+ I VD++ L +GD+I + D+ +P ++ Sbjct: 123 GGVLEHFLREVEISCLPTALPEVIKVDVSSLDVGDTIFVRDLPVPPGVKVLADP 176 >gi|294101746|ref|YP_003553604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] gi|293616726|gb|ADE56880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Aminobacterium colombiense DSM 12261] Length = 217 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 93/185 (50%), Gaps = 2/185 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 K+ R++ GK + + LR G +PA+ YG D + + A DI+ + S ++ T Sbjct: 5 VKIVLEERNEKGKQAVKKLRPTGYVPAVFYGPEYRDAVTVKVKASDIAAVIRSGHWETVR 64 Query: 65 LTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + + ++ Q + +++ +IH DF+Q+ +G + V++PV G+K Sbjct: 65 FNASLPNGREEMCLMRNIQRNLLNNEIIHIDFIQLLKGHKIAVNIPVVLEGREDCVGLKH 124 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 GG + + +EV + IP+S+++D++ L +G+ ++D+ LP+ + L + T Sbjct: 125 GGIIEQLLYEVEIEVLPTEIPNSVSIDVSGLNVGEGFSVKDLALPKSADILVDLEELVVT 184 Query: 184 IVAPI 188 + P Sbjct: 185 VAQPK 189 >gi|227548215|ref|ZP_03978264.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079689|gb|EEI17652.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium lipophiloflavum DSM 44291] Length = 226 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + A R++ GKG+AR LR++G+IP ++Y + + ++ +++ + + Sbjct: 1 MATTPPVVKAHKREEFGKGAARRLRRDGRIPGVLYESGIENVHFSVDRIEMTALVRND-G 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 IL LD+ + + + K + ++ + H D L V G VTV VPV E Sbjct: 60 TNAILRLDVDGKELLCMVKHVDQNVLTLEIDHIDLLGVKRGEKVTVEVPVVTEGEAVDDA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + A NIPD I V++ +IG+ I ++ LP S + Sbjct: 120 VVL-----QETDVLEIEVDALNIPDEIVVNIEGKEIGEQIVASEVVLPAGAELTSDPDAL 174 Query: 181 IATIV 185 + + Sbjct: 175 VVNVT 179 >gi|299135706|ref|ZP_07028890.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] gi|298601830|gb|EFI57984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX8] Length = 225 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 1 MDQKECK-LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M + + + A R KG AR +R +G IPA++YG + + + + I+K LYS+ Sbjct: 1 MSTSKIEAVVATPRTGTFNKGHARRVRVSGLIPAVVYGAGQESVAVTVDPRVITKILYSE 60 Query: 59 NFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + TI L I GK V+ D+Q +P+ L+H D +++ + V VPV+ I Sbjct: 61 SGHNTIFDLAIEGKGTNKVMIVDWQHEPIKGKLLHIDLKRIAMDKAMRVSVPVQLIGVPV 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GG L V HEV + C +IPD I +D+ +L+I +IH+ D+ +K + + Sbjct: 121 GVKTG-GGVLGQVLHEVEVECLPGDIPDHIDIDVANLEINGAIHISDLPHSDKLKFLGEE 179 Query: 178 NITIATIV 185 + +A + Sbjct: 180 DALVAHVT 187 >gi|224475643|ref|YP_002633249.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus carnosus subsp. carnosus TM300] gi|254801062|sp|B9DLD8|RL25_STACT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222420250|emb|CAL27064.1| 50S ribosomal protein L25 [Staphylococcus carnosus subsp. carnosus TM300] Length = 214 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + +R +G++PA++YG + + + K + ++ Sbjct: 3 SLKSIIRQGKQRRSDLTAIRNSGKVPAVMYGYGQKNVSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVHLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ + + NIP+ + V+++ L+IGDS+ + D+ + ++ T+ T+V Sbjct: 120 VVDQPLFNLEVTATPENIPEYLEVEISGLEIGDSLSVADLNTTGDFTIENEPEATVVTVV 179 Query: 186 APISG 190 P G Sbjct: 180 PPTQG 184 >gi|288554661|ref|YP_003426596.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] gi|288545821|gb|ADC49704.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus pseudofirmus OF4] Length = 211 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 3/174 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + + R +RK+G +PAI+YGN + KP+ + + + K + + Sbjct: 3 TTLQANPRTDLTGSATRQIRKDGHVPAILYGNKIESKPVYVESVEFLKTVREV-GKNGLF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +L++ V+ D Q+DP+ + +H DF +V S + VPVR ++PG K+GG Sbjct: 62 SLNVDGSKHQVMIHDVQIDPLKNEYVHVDFFEVDMKSEIDADVPVRLT--GEAPGTKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 L+ + +++S+ C N+IP+ I VD++ L IGDSI + D+R ++ Sbjct: 120 VLSHLLYDISVKCLPNDIPEEIKVDVSGLNIGDSIQITDLRDKVSVDITNEDEE 173 >gi|220904720|ref|YP_002480032.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254801042|sp|B8J0S7|RL25_DESDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|219869019|gb|ACL49354.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 199 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 6/188 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ ++ LS R+ GKG + LR IP + Y + + A + K Sbjct: 1 MNIEK-TLSVQKREGYGKGPSGRLRAQKLIPGVFYTPKGENISVQAPALPLQKIYEEMGH 59 Query: 61 ---MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + K V+ Q P H DF V VTV VPV F+ Sbjct: 60 TTVFNLEIEENGQKTAYPVLIWQVQFHPYKRAFTHIDFYGVDLDKEVTVDVPVEFV--GT 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 S G+K GG L V L N+P ITVD+ D+ I D+I + D++LPE + Sbjct: 118 SRGVKLGGVLETYREMVRLTSKPLNMPQKITVDVTDMGINDTISVGDLKLPENVRAEFDQ 177 Query: 178 NITIATIV 185 N + T++ Sbjct: 178 NYALVTVI 185 >gi|51893419|ref|YP_076110.1| 50S ribosomal protein L25/general stress protein Ctc [Symbiobacterium thermophilum IAM 14863] gi|71153112|sp|Q67M29|RL251_SYMTH RecName: Full=50S ribosomal protein L25 1; AltName: Full=General stress protein CTC 1 gi|51857108|dbj|BAD41266.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863] Length = 205 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 4/185 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK-RLYSKNF 60 +L A R+ G ++R LR+ G +P IIYG +P I++ + + Sbjct: 1 MNAVLQLEARTRE-TGSRASRRLRQAGFVPGIIYGPGVEPLAISVPTIQLERLVDRHGRG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ V+ K Q D ++ + H DFLQV T+T+ VP+ + E Sbjct: 60 HLINAHVEGEANPRQVVIKQLQRDVLTAQVTHVDFLQVDIHRTITLTVPIAVVGEE--QA 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++G + EV + C IP++IT+D++ + + + + P + + Sbjct: 118 KRRGLIVTHELAEVEIKCRPTEIPEAITLDISGVTEPGPVTVASLAAPPGVEVLEDPDTV 177 Query: 181 IATIV 185 + + Sbjct: 178 VLSCT 182 >gi|193215984|ref|YP_001997183.1| 50S ribosomal protein L25/general stress protein Ctc [Chloroherpeton thalassium ATCC 35110] gi|226736298|sp|B3QWH6|RL25_CHLT3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|193089461|gb|ACF14736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chloroherpeton thalassium ATCC 35110] Length = 199 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R K + LR NG +PA +Y +++ + + K +Y+ Sbjct: 1 MQTIVLEAERRMPGKKSDLKQLRANGNVPATLYHKGEPSISLSVKEQSLRKVIYTTESHI 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G E + KDYQ +P++D + HADF + V V VP+ F G+ Sbjct: 61 INLRFTDGTEK-PSVMKDYQFNPLTDSITHADFQLLKSDEYVEVEVPILFT--GNPVGVV 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKTS--SMSQLN 178 +GG + H++ + C +++P+ ITVD++ + +G+S+H+ ++ ++ EK ++ + Sbjct: 118 KGGMVQATLHKLEIRCLPSDMPEHITVDISSMDMGESLHVGELSSKIQEKIEFTVLTDSH 177 Query: 179 ITIATIVAPI 188 + +++AP Sbjct: 178 APVISVLAPR 187 >gi|298207389|ref|YP_003715568.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] gi|83850025|gb|EAP87893.1| putative ribosomal L25p family stress protein [Croceibacter atlanticus HTCC2559] Length = 217 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ +GK + + LR +P ++YG P + K+ +Y+ + T Sbjct: 1 MKSITIYGSKRESLGKKATKALRNAEAVPCVLYGGEK-PVHFSAEEKEFRNLIYTPDVHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD G+ + I +D Q PVS+ ++H DF ++ +G +T+ +P+ K G+K Sbjct: 60 VVIELDNGE-KYNAIVQDLQFHPVSEAILHVDFYEIVDGRPITMEIPIHSEGVAK--GVK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + + A N+PD I D+ LKIG+ +++ ++ + + N I Sbjct: 117 NGGVLRFNLRRLKVKGLAKNLPDYIVADVTKLKIGNKLYVTEVA-NDDYKILHPDNTVIC 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|183219660|ref|YP_001837656.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909797|ref|YP_001961352.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774473|gb|ABZ92774.1| 50S Ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778082|gb|ABZ96380.1| 50S ribosomal protein L25 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 211 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ + A R GKG AR +R G +PA I G+ + K ++ K+I K + S Sbjct: 1 MEKISIKAQPRTSTGKGPARRMRVEGLVPANIIGSG-EAKSASVVEKEIQKLIDSGIRKA 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ L++ + V K+ Q P + + H DF +V+ G + V ++ K G K Sbjct: 60 TLIDLELDGKSEKVFVKEIQRFPHTGQIRHIDFYKVTPGKKIQTTVAIKTTGVAK--GSK 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+ + HE+ + ++ D ITVD+ L IG I + ++ P+ + + +A Sbjct: 118 AGGQFEHLVHEIKVKSTPEDLTDVITVDVTGLDIGMMIKVSELPHPQSWEILVNGDPIVA 177 Query: 183 TIVAPIS 189 + + Sbjct: 178 SCNKTKA 184 >gi|312128896|ref|YP_003996236.1| lsu ribosomal protein l25p [Leadbetterella byssophila DSM 17132] gi|311905442|gb|ADQ15883.1| LSU ribosomal protein L25P [Leadbetterella byssophila DSM 17132] Length = 190 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +G+ SA+ LR G +P I+YG I+ A R + Sbjct: 1 MKVTEIVGFKRANLGRQSAQELRAEGYVPGILYGGEEQ---ISFYAPAYLFRPVVYSIDA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L I + I +D Q PV+D LIH D L+++ +T +PVR K G K Sbjct: 58 YEIKLTIDGKEYRAILQDKQFHPVNDSLIHVDLLEINPDKVITTTIPVRLTGTAK--GAK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QGGKL +V + PA IP+ + +D+ +L +G SI ++ I LPE + + +A Sbjct: 116 QGGKLVQTLRKVRVKGPAKLIPEFVNLDVTELGLGKSIRVKSIELPE-LTIIDPAANPVA 174 Query: 183 TIVAPIS 189 T+ P + Sbjct: 175 TVTIPRA 181 >gi|227537439|ref|ZP_03967488.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242713|gb|EEI92728.1| stress induced RNA binding ribosomal protein L25p family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 198 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ Sbjct: 1 MKSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQ-THLSVSAADLKPVLYTPEV-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + LDI + I +D Q P++D++IH DFL++S+ V+V++PV SPG+K Sbjct: 58 VFVELDINGKKSKAIVQDAQFHPLTDLVIHIDFLELSDDKEVSVNIPVTLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + NN+P SI V + L++G S+ + ++L + ++ + TI Sbjct: 116 MGGKLVQKLRTLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL-KDAKILNNSDDTIV 174 Query: 183 TIVAPIS 189 ++V + Sbjct: 175 SVVMSRA 181 >gi|315193864|gb|EFU24258.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS00] Length = 213 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 4/182 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LRK+G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 ELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+V Sbjct: 120 VVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVV 179 Query: 186 AP 187 AP Sbjct: 180 AP 181 >gi|302871951|ref|YP_003840587.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] gi|302574810|gb|ADL42601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor obsidiansis OB47] Length = 200 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LRK G IPA+ YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|269926740|ref|YP_003323363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] gi|269790400|gb|ACZ42541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum terrenum ATCC BAA-798] Length = 205 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 3/187 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q+ + A R+ VG+ LRK G +PAI+YG DP P+ ++A++ L Sbjct: 1 MTQENFTIKASKRELVGRS-LNTLRKQGFVPAIVYGYGIDPTPVQVNAREFEHTLKRAGR 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I + V V +D Q+ PV ++HADF V+ + VP+ + E + Sbjct: 60 TSLIDLQIDDSQTVKVFIQDVQVHPVKLNILHADFHAVNLEEEIETEVPIVLVGEPAAI- 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNI 179 G L +++ +IP I +++ DL +I +I++ DI+ S Sbjct: 119 RNNIGVLQRGLESLTVRAKPADIPHEIEINVEDLAEIDQTIYVADIKPSGNYKITSDPEE 178 Query: 180 TIATIVA 186 + IV Sbjct: 179 MVVKIVP 185 >gi|312793426|ref|YP_004026349.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180566|gb|ADQ40736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 198 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LRK G IPA+ YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDVFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|299536725|ref|ZP_07050035.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727839|gb|EFI68404.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 198 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 4/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 LS R+ + + LRK G IPA+IYG D PI+++AKD K + KN Sbjct: 1 MSTV-LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKVDSTPISIAAKDFKKSIQ-KNGQN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ +L++ + V+ + + Q + D + H DFL ++ + VP++ + +S G+ Sbjct: 59 SVFSLELEGKKVNAVVSEVQQCSLKDEVNHIDFLAINMAEELEADVPIKLL--GQSVGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + +P+SI VD++ LKIG+S+ + DIR +S+ + + Sbjct: 117 EGGILMQPNLELKVKVKPTELPESIDVDISSLKIGESLTVADIRDATPVEIISEDDYMLV 176 Query: 183 TIVAPIS 189 TIVAP+S Sbjct: 177 TIVAPVS 183 >gi|289547989|ref|YP_003472977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] gi|289181606|gb|ADC88850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis albus DSM 14484] Length = 193 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ + R K + +RK G +P IYG + + KD+ + + F Sbjct: 1 MKRIEVKLIPRKPGKKSEIKRMRKEGYVPVEIYGKDVENTHAYMKVKDLLSLPHGETF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +I E + K+ Q + D +H D +S + + VPV F+ G+ Sbjct: 59 -LLVAEIEGEKRVCLLKEVQTGWLGDDPLHVDLYDISHVRELELEVPVEFVGTPAGVGLG 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + V +++ P + IPD I VD++ L +GD++H+ DI+ PE M +A Sbjct: 118 GTFEA--VLTTLTVKAPIDRIPDKIVVDVSSLGLGDALHVRDIQPPEGCIIMDNPEEVVA 175 Query: 183 TIV 185 ++ Sbjct: 176 VVL 178 >gi|56961862|ref|YP_173584.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus clausii KSM-K16] gi|68053067|sp|Q5WAD7|RL25_BACSK RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|56908096|dbj|BAD62623.1| ribosomal protein L25 family general stress protein [Bacillus clausii KSM-K16] Length = 218 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A R + LR G +P ++YG P+++ A K Sbjct: 4 LNARERKDQKAHQTKELRNQGHVPGVLYGKKVKSTPVSVEAVAFLKTFRDVGQNGLFDLQ 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 HV+ ++ Q+DP+++ +H DF +V V+VPV +PG K+GG + Sbjct: 64 LENGGKHHVMVQEVQIDPLNNQYMHVDFFEVDMNEERDVNVPVHLE--GDAPGAKEGGIV 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 N + +E+++ C +IP+SITVD+++L IGDS+ + DIR + +++ + Sbjct: 122 NHLLYEITVHCLPADIPESITVDISNLNIGDSLSVSDIRANVPVTIVNEDDE 173 >gi|226309687|ref|YP_002769581.1| 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] gi|226092635|dbj|BAH41077.1| probable 50S ribosomal protein L25 [Brevibacillus brevis NBRC 100599] Length = 202 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 9/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L A R+K + ++LR G +P I+YG+ KPI + +++ L ++ Sbjct: 1 MEQ--LQAQSREKKTGNAVKVLRNEGWVPGIMYGSEVGNKPIQVKGRELDAALRQQS-TN 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L + V+ + Q P+ ++HADF +++ + VPV G Sbjct: 58 KPFRLSVDGNTHDVMVYELQRHPLQGNILHADFKKINMNEKIHTSVPVLMT------GDP 111 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + G +V H V + C NIP+S VD++ IGD + + D+ +P + Sbjct: 112 ELGVATLVRHSVEVTCLPGNIPESFLVDVDGFNIGDVVLVGDLTVPPGVELGLDSTEVLI 171 Query: 183 TIVAPISGS 191 +++ + S Sbjct: 172 SVLPVKAKS 180 >gi|326802495|ref|YP_004320314.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] gi|326553259|gb|ADZ81644.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21] Length = 195 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG + + Sbjct: 1 MKSIAISGSPRENVGKRDAKELRYAGKVPAVLYGGGEQ---YHFAVSAADLKPLIYTPEV 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I + I ++ Q P++D +IH DFL +S+ V++++P+ SPG+K Sbjct: 58 NFVDLEISGKKYQAIVQEAQYHPLTDQIIHVDFLALSDDKAVSMNIPIALT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P I V L L++G S+ + + + + ++ + TI Sbjct: 116 MGGKLVQKLRKLRVKALPKDMPQVIEVSLESLEVGKSVRVGAVEV-KNAKILNNADDTIV 174 Query: 183 TIVAPIS 189 +++ + Sbjct: 175 SVIMSRA 181 >gi|258647538|ref|ZP_05735007.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] gi|260852318|gb|EEX72187.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259] Length = 206 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 97/194 (50%), Gaps = 11/194 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD------PKPIALSAKDISKRLY 56 K+ +S V R +VGK + + LR+ G IP +YG + A+S KD K +Y Sbjct: 1 MKQISISGVKRTEVGKRATKALRREGLIPCNLYGQQKNENGEAVAMAFAISEKDAQKLIY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + + +D + ++ Q PV D ++H DFL+V + + VP++ + Sbjct: 61 TPHIYLVDINIDGEDHK--AVLRESQFHPVKDNILHIDFLEVHAERPIVIGVPIQ--TQG 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G++ GG+L + ++++ +IP+ + +D+ +LK+G SI + D+ + ++ Sbjct: 117 LAEGVRAGGRLMTLIRKINVRALYQDIPEKLQIDVTELKLGKSIKVGDLSYDK-LELVTP 175 Query: 177 LNITIATIVAPISG 190 ++ + ++ + Sbjct: 176 KDVIVVSVKMTRAA 189 >gi|288817436|ref|YP_003431783.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|288786835|dbj|BAI68582.1| ribosomal protein L25 [Hydrogenobacter thermophilus TK-6] gi|308751043|gb|ADO44526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hydrogenobacter thermophilus TK-6] Length = 192 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L + R+ K + +R+ G IP +YG + + +S KD+ + + F Sbjct: 1 MRKVSLKLIPRELGKKSEIKRMRREGYIPVEVYGKDVENRHAYVSLKDLMSLPHGETF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ D+ E + KD Q+ + D +H D +S + + VP+ F+ G+ Sbjct: 59 -LIEADVDGEKRVCLLKDIQVGYLGDDPVHVDLYDISHTKEIEIEVPLEFVGTPAGVGLG 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + V+ H +++ ++IPD ITVD++ + +GD +H+ DI P M IA Sbjct: 118 GTFE--VMMHTLTVKASVDSIPDKITVDVSAMNVGDVLHVRDITPPSGCVIMDSPEEVIA 175 Query: 183 TIV 185 ++ Sbjct: 176 VVL 178 >gi|312622515|ref|YP_004024128.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Caldicellulosiruptor kronotskyensis 2002] gi|312202982|gb|ADQ46309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor kronotskyensis 2002] Length = 200 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LRK G IPA+ YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMSYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter oxydans 621H] gi|68053025|sp|Q5FRT8|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H] Length = 218 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQL 83 R+ G +PA+IYG +P IAL + I K L+ + + + L G E V + +D QL Sbjct: 24 RREGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV+D IH DF +V+ G+ V V V + F+ E KSPGIK+GG LNVV H V + NI Sbjct: 84 HPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVLNVVRHYVDVQADPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL--NITIATIVAP 187 P+ T +L+ L I D++ D++ E S ++ IA+I AP Sbjct: 144 PEHFTAELSGLDIHDNVRWTDLKGTEGVVLGSGQAADMVIASIAAP 189 >gi|222529238|ref|YP_002573120.1| 50S ribosomal protein L25/general stress protein Ctc [Caldicellulosiruptor bescii DSM 6725] gi|254801034|sp|B9MRP3|RL25_ANATD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222456085|gb|ACM60347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor bescii DSM 6725] Length = 200 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LRK G IPA+ YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDIFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I ++DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMAYEKPTAIKLKDIKLPEGIKITEDLDEVVAVI 178 >gi|297207396|ref|ZP_06923835.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887959|gb|EFH26853.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 219 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M L +++R K + + LRK+G++PA++YG + + + + K + Sbjct: 1 MRMAS--LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREV- 57 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ Sbjct: 58 GRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLV--GEAV 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ + + Sbjct: 116 GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSSE 175 Query: 180 TIATIVA 186 ++ T+VA Sbjct: 176 SVVTVVA 182 >gi|167463174|ref|ZP_02328263.1| ribosomal protein L25 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381193|ref|ZP_08055196.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154769|gb|EFX47040.1| 50S ribosomal protein L25-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 199 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+K +G LRK G+IPAI+YG P+AL K + L + L Sbjct: 3 IMLQGTTRNKGTRGELNKLRKEGKIPAIVYGKTLVSSPLALEKKHVLALLKTHPNAVIDL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + V+ Q DP++ ++H D Q++ V V + F E +K+GG Sbjct: 63 DIP-EVGKRPVMISQVQRDPINGDVVHLDLHQINLDEPVRTAVALEFTGEPAD--VKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + E+ + C + +P+ + VD++ L + ++ + DI +P+ ++ N + TI+ Sbjct: 120 ILQIQTAELEVRCLPDRLPEQLKVDISKLGVNQNLLVSDIEVPQGVEVVTDGNEVLITIL 179 Query: 186 AP 187 P Sbjct: 180 VP 181 >gi|126653272|ref|ZP_01725383.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589946|gb|EAZ84075.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 198 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 101/188 (53%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 LS R+ + + LRK G IPA+IYG D PI++SAK+ K + KN Sbjct: 1 MSTV-LSVTKRETGHRSTLTQLRKGGAIPAVIYGYKLDSTPISISAKEFKKSIQ-KNGQN 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ +LD+ + V+V+ + Q + D + H DFL ++ + VP++ + +S G+ Sbjct: 59 SVFSLDLEGKKVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEADVPIKLV--GQSVGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L E+ + +PDSI VD++ LK+G+S+ + +IR +S+ + + Sbjct: 117 EGGILMQPNLELKVKVKPAELPDSIEVDISSLKVGESLTVAEIRNQTPVEVISEDDYLLV 176 Query: 183 TIVAPISG 190 TIVAP+S Sbjct: 177 TIVAPVSA 184 >gi|304382452|ref|ZP_07364950.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] gi|304336405|gb|EFM02643.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973] Length = 207 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 KE +S +R +GK +++LLRK G IP +YG + P+ + + R Sbjct: 1 MKEINVSGQVRTDLGKKASKLLRKEGLIPCNLYGEARNEKGLPEAFSFVIPMVDLRKLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ +DI + I K+ Q PV+D L+H DF +++E +TV +PV+ + Sbjct: 61 TPHIYVVNIDIDGKAHKAILKELQFHPVTDALLHVDFYEINEEKDITVGIPVKLT--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG++N+ ++++ P IP+ + +D+ L+IG SI + + E ++ Sbjct: 119 QGVRDGGRMNLSIRKINVRAPYKRIPEQLEIDVTPLQIGKSIKVGQLNF-EGLEIVTSKE 177 Query: 179 ITIATI 184 + + ++ Sbjct: 178 VIVCSV 183 >gi|315226512|ref|ZP_07868300.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] gi|315120644|gb|EFT83776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parascardovia denticolens DSM 10105] Length = 223 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 9/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N Sbjct: 18 MADITLEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN--- 74 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ + GKE + ++ Q +PV + H DF +V G V V VPV K + Sbjct: 75 ALIEIKYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEVEVPVFVEGTPKGAAV- 133 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 V + + +N+P+SIT++++ + G+ + +D+ LP+ + + ++ Sbjct: 134 ----AFVDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQGSELAIEDPEESV 189 Query: 182 ATIV 185 ++ Sbjct: 190 VSVT 193 >gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli IE4771] Length = 152 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 69/140 (49%), Positives = 100/140 (71%) Query: 51 ISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 ++KR+++ FMTT+ T+++ + V+PKDYQLDPV D +H DFL+VS + VTV +PV Sbjct: 1 MTKRIHAGGFMTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPV 60 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FINE KS G+K GG LN+V H V + CPA+ IP+ +DL+ KIGDSIH+ ++ LP+ Sbjct: 61 HFINEEKSQGLKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKG 120 Query: 171 TSSMSQLNITIATIVAPISG 190 +++ + TIATIVAP +G Sbjct: 121 VTTVIDRDFTIATIVAPAAG 140 >gi|239618100|ref|YP_002941422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] gi|239506931|gb|ACR80418.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga olearia TBF 19.5.1] Length = 215 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS---KN 59 E +L A RD K A+ L KNG+IPA++YG + PI++ ++ + + Sbjct: 1 MHEVRLPAEKRDTSVK--AKDLLKNGKIPAVVYGPDVESFPISVDKVEVMRHINHIVETT 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + + + K+ H K Q D VSD +IH DF ++G + +H+P+ FI K+ Sbjct: 59 PIVFEIEENGEKKEYHGFLKAVQRDRVSDAIIHMDFYIPAKGHKMEIHIPIHFI--GKAK 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+++GG L + + + + I +++ V++ L +GD + ++DI LPE ++ Sbjct: 117 GVEKGGILEHIITHLPVETLPSTIVEALEVNIEHLDLGDVLRVKDIPLPEGMKVLADPEE 176 Query: 180 TIATIVAPIS 189 + I P S Sbjct: 177 PVVVIEVPRS 186 >gi|294786876|ref|ZP_06752130.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] gi|294485709|gb|EFG33343.1| ribosomal protein L25, Ctc-form [Parascardovia denticolens F0305] Length = 206 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 9/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L +RD+ GKG+AR +R G IPA IY +P I L K+ + + +N Sbjct: 1 MADITLEGEIRDEFGKGAARRMRVAGLIPASIYEGGKEPVFIKLPQKEATLAMRHQN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ + GKE + ++ Q +PV + H DF +V G V V VPV K + Sbjct: 58 ALIEIKYGKESKLAVAREVQHNPVKRTIEHIDFYEVHAGEKVEVEVPVFVEGTPKGAAV- 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 V + + +N+P+SIT++++ + G+ + +D+ LP+ + + ++ Sbjct: 117 ----AFVDVQNLKVRADVSNLPESITINVDGMVDGEHVFAKDVELPQGSELAIEDPEESV 172 Query: 182 ATIV 185 ++ Sbjct: 173 VSVT 176 >gi|300770848|ref|ZP_07080725.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] gi|300762121|gb|EFK58940.1| 50S ribosomal protein L25 [Sphingobacterium spiritivorum ATCC 33861] Length = 198 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R VGK A+ LR GQ+PA++YG+ + +++SA D+ LY+ Sbjct: 1 MKSIAISGSARQNVGKRDAKELRYEGQVPAVLYGSGTQ-THLSVSAADLKPVLYTPEV-- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I + I +D Q P++D++IH DFL++++ V+V++PV SPG+K Sbjct: 58 VFVELNIDGKKSKAIVQDAQFHPLTDLVIHVDFLELNDDKEVSVNIPVTLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + NN+P SI V + L++G S+ + ++L + ++ + TI Sbjct: 116 MGGKLVQKLRKLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQL-KDAKILNNSDDTIV 174 Query: 183 TIVAPIS 189 ++V + Sbjct: 175 SVVMSRA 181 >gi|194336703|ref|YP_002018497.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] gi|226736345|sp|B4SAJ4|RL25_PELPB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|194309180|gb|ACF43880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon phaeoclathratiforme BU-1] Length = 199 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K +A LRKNG +P +IY + I+++ + K ++S Sbjct: 1 METIVLGVEPR-VIKKKNAEKLRKNGIVPGVIYHKGEETIAISVNELALRKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK KD Q PV+D +IH DF S + + VPV +S G++ Sbjct: 60 IDLQFPDGKIK-RSFIKDVQFHPVTDRIIHTDFQLFSAEEIIELEVPVAV--SGESAGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNIT 180 +GGKL ++ H +++ ++PD + VD+ L+IG SIH+++I L M + Sbjct: 117 KGGKLLIILHALTIKGKPEDMPDHLVVDVTALEIGHSIHVKEIPLDAYTGLQIMDDPDTP 176 Query: 181 IATIVAPI 188 + T++A Sbjct: 177 VITVLASK 184 >gi|305682167|ref|ZP_07404971.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] gi|305658640|gb|EFM48143.1| ribosomal protein L25, Ctc-form [Corynebacterium matruchotii ATCC 14266] Length = 204 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTT 63 E ++A R + GKG AR LR G++P +IY + D P A S DI L + Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLDTPIHFAASRIDIHALLR-NHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGEPTP----- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L V + +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 118 GTMLVQDSDTVLVEADVLSIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|146298888|ref|YP_001193479.1| 50S ribosomal protein L25/general stress protein Ctc [Flavobacterium johnsoniae UW101] gi|189042357|sp|A5FKV4|RL25_FLAJO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|146153306|gb|ABQ04160.1| LSU ribosomal protein L25P [Flavobacterium johnsoniae UW101] Length = 203 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK S + LR G +P ++YG + A +Y+ N T Sbjct: 1 MKSITIKGSERESVGKVSTKALRNAGAVPCVLYGGN-QAVHFSADAAAFKNLVYTPNAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L GK + I +D Q+ PV+D ++H DF Q+ + +T+ VPV+ + +K G+ Sbjct: 60 VVIELGKGK-SFNAILQDIQVHPVTDKILHIDFFQLFDDKEITMEVPVKIVGTSK--GVL 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L + ++ + N+PD + D+ L++G+ +++ + PE M N +A Sbjct: 117 AGGVLRLNQRKLKVKALPANLPDFVEADITPLEMGNKLYVTKVGKPE-YKIMHPDNTVVA 175 Query: 183 TI 184 + Sbjct: 176 QV 177 >gi|188997588|ref|YP_001931839.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932655|gb|ACD67285.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurihydrogenibium sp. YO3AOP1] Length = 197 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 4/175 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + + A+ R+K K + RK G +PA +YG + ++ K S Sbjct: 1 MIQTIEWKALPREKAVKSELKNYRKKGYLPAEVYGKGHPNISVYINKK--SLLSKPHGNF 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L ++ E I KD Q + D IH D +V++G + + VPV F K+ G+ Sbjct: 59 LISLVVEGDPEPKLCILKDIQYSYLGDEPIHVDLYEVTQGLELDIEVPVEFT--GKAIGL 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 ++GG H + + NIP+ I +D+++L +GD +H+ DI+ PE M+ Sbjct: 117 EKGGIFEAHLHSILVRTTPRNIPEKIVIDVSNLDLGDVLHVRDIQAPEGVKIMTH 171 >gi|227832720|ref|YP_002834427.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|262182791|ref|ZP_06042212.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] gi|227453736|gb|ACP32489.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A +R + GKG AR LR G+IP ++YG+ D A+ +++ + + Sbjct: 1 MANTRPVLKAEVRSEFGKGFARRLRAAGKIPGVVYGHAVDVLHFAVDRLEMTALVR-NHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + L++ E V+ K + ++ + H D L + G V V VPV E Sbjct: 60 VNAVFELELEGEQHLVMVKHIDQNVLTFNIDHIDLLSIKRGEKVEVEVPVVLEGEPAP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + + NIP+ I V + L+ G + ++ LPE T+ ++ + Sbjct: 118 ---GLMFIQDADVLLVEADVLNIPEEIVVSIEGLEDGTVVTAGEVSLPEGTTLAAEEDTV 174 Query: 181 IATIVAP 187 I +I P Sbjct: 175 IVSISEP 181 >gi|224373133|ref|YP_002607505.1| 50S ribosomal protein L25/general stress protein Ctc [Nautilia profundicola AmH] gi|254801057|sp|B9LA47|RL25_NAUPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|223589444|gb|ACM93180.1| ribosomal protein L25, Ctc-form [Nautilia profundicola AmH] Length = 178 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ K + LR++G + A IYG + A D K L N + + Sbjct: 2 LEGIIRESTSKAETKKLRRDGYLIANIYGKGQENINAAFKTGDFIKYLR--NKEHLVFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V V+ ++YQ PV+ L+H D L +G HVP++ G+K G L Sbjct: 60 KVGDKEVKVVVQEYQKHPVTGELLHVDLLMAQDGVKSYYHVPIKVK--GTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + N+PD +D+ +L +GD+I + DI +PE +I + ++ Sbjct: 118 IYHRRRIKVKAAPENLPDFFELDVTNLDVGDNILIRDIEMPEGVECFLNPSIPVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|311028983|ref|ZP_07707073.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] gi|311032295|ref|ZP_07710385.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. m3-13] Length = 213 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 103/183 (56%), Gaps = 7/183 (3%) Query: 8 LSAVMRDKVGKGSAR-LLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L A R + KGS++ +R+ G IPA++YGN ++ K I + +K+ K + + I++ Sbjct: 4 LHANERTEF-KGSSKTKIREEGLIPAVVYGNDTENKSITVDSKEFIKTIR-ETGRNGIIS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSD-ILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L+IG + V+ DYQ++P+ +H DF V+ S + V V V + G+K GG Sbjct: 62 LEIGSDKRKVMLYDYQINPLKSLEFVHLDFHVVNFKSEIDVDVTVHVT--GDAKGVKDGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V HEVS+ N++P+SI VD+ +L + ++I + D++ + S + + +A+I+ Sbjct: 120 VLQQVLHEVSIKALPNDVPESIDVDVTELDVNENITIGDLKSGK-YSFNHEDDEVVASIL 178 Query: 186 API 188 P Sbjct: 179 PPR 181 >gi|225023009|ref|ZP_03712201.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] gi|224944232|gb|EEG25441.1| hypothetical protein CORMATOL_03057 [Corynebacterium matruchotii ATCC 33806] Length = 203 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTT 63 E ++A R + GKG AR LR G++P +IY + D P A S DI L + Sbjct: 4 EIIIAAEPRAEFGKGFARRLRAAGKVPGVIYSSFLDTPIHFAASRIDIHALLR-NHGTNA 62 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 + LDI + V+ K + ++ H D L + G V V VPV F E Sbjct: 63 VFELDIEGDKHLVMVKHVDQNVITLNADHIDLLAIKRGEKVEVDVPVVFEGEPTP----- 117 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L V + +IP+ IT ++ L + + D+ LP K + ++ +AT Sbjct: 118 GTMLVQDSDTVLVEADVLSIPEEITFNIEGLDVDSKVTAADLVLPAKVTLVADPETVLAT 177 Query: 184 I 184 I Sbjct: 178 I 178 >gi|212550489|ref|YP_002308806.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226736279|sp|B6YQC3|RL25_AZOPC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212548727|dbj|BAG83395.1| 50S ribosomal protein L25 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 189 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L RD +GK + + RK IP ++YG + + +++ K +Y+ + Sbjct: 1 MKTFQLKGFRRDFLGKKAVKAYRKESLIPCVLYGGNENVIHFNVFRENLRKLVYTPDVFI 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L I ++L I K+ Q PV+D ++H DFL++ + V + +PV + GIK Sbjct: 61 --VNLCIEEKLYLSILKEIQFHPVNDEILHVDFLRIFKNKPVIIEIPVVLE--GLAEGIK 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + + P+ + +++ +L++G +I + + + ++ + +A Sbjct: 117 AGGKLCSEMRKLKVKGFYKDFPERLVINVENLELGKTIQVGKLSF-DNLELLNAKDNVVA 175 Query: 183 TI 184 ++ Sbjct: 176 SV 177 >gi|258404967|ref|YP_003197709.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] gi|257797194|gb|ACV68131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 8/191 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDIS---KRLYS 57 M +E +L A RD+VGK R +R+ G IP I Y D P+ + + + ++ +S Sbjct: 1 MS-EEIRLQAFKRDEVGKQGLRSVRQQGYIPGIYYDAKGDNVPVKVRYRALESAFRKAHS 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + + V+ D Q PV D+++H DF V + V +PV+ + Sbjct: 60 NHVIQLEIANGGQGTPRPVMIWDIQHHPVKDLILHVDFFGVDMSKEIQVEIPVQIE--GE 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ- 176 + G+ GG+L V + + C + IP++I +D++ L++ +++++ED+ PE + Sbjct: 118 AQGVVDGGQLTVYHEALLVSCLPDAIPENIRIDVSALEMNENVNIEDVTFPEGVVPVYDG 177 Query: 177 -LNITIATIVA 186 N +A + Sbjct: 178 EENFAVAGVNP 188 >gi|297591588|ref|ZP_06950225.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300910355|ref|ZP_07127808.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|297575457|gb|EFH94174.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8] gi|300888344|gb|EFK83531.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH70] gi|312436409|gb|ADQ75480.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TCH60] gi|320139412|gb|EFW31290.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA131] gi|320144189|gb|EFW35957.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus MRSA177] Length = 219 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M L +++R K + + LRK+G++PA++YG + + + + K + Sbjct: 1 MRMAS--LKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREV- 57 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++ L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ Sbjct: 58 GRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLV--GEAV 115 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G K+GG + + + +NIP++I VD+ +L I DS+ + D+++ + Sbjct: 116 GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAE 175 Query: 180 TIATIVA 186 ++ T+VA Sbjct: 176 SVVTVVA 182 >gi|124010550|ref|ZP_01695178.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] gi|123982281|gb|EAY23848.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134] Length = 204 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK S++ LR++G +P ++YG + + I R Sbjct: 1 MKTLEIIGYHRANLGKKSSKDLRRDGNVPCVLYGGDKQ---VHFQSPMILFRDLVYTPNI 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++ + I +D Q PVS+I++HADFLQ+SE + + VPV+++ SPG+ Sbjct: 58 HKVLLNVEGDKYECILQDIQFHPVSEIIMHADFLQISEDKAIKMDVPVKYV--GTSPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG+L +++ + +P+ I VD+++L++G S+ + + E ++ IA Sbjct: 116 GGGRLVSKLNKLKVSALPTKMPEFIEVDISELELGKSVKVGALSTTE-FEILNSDRSPIA 174 Query: 183 TIVAPIS 189 ++ + Sbjct: 175 SVELTRA 181 >gi|328949924|ref|YP_004367259.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] gi|328450248|gb|AEB11149.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884] Length = 209 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + + LR G++P ++Y N + I + + K + I Sbjct: 2 EYRLKAYTRENE---NPKQLRAQGKLPGVLY-NKEINRKIYVELNEFDKVFRKASIHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + LD H DF V V ++VP++F+ + G++ G Sbjct: 58 TLELPDGTTYDTLVRQLNLDKRRRRPEHVDFF-VLSDEPVEMYVPLKFV--GTAEGVRLG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V H+V + NIP+ I VD++ L IG S+H+ DI LPE T+ T+ Sbjct: 115 GVLEQVLHDVLVRVAPRNIPEFIEVDVSGLGIGQSLHLADITLPEGVELAMSPEETVVTV 174 Query: 185 VAP 187 V P Sbjct: 175 VPP 177 >gi|78187201|ref|YP_375244.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium luteolum DSM 273] gi|109893376|sp|Q3B380|RL25_PELLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78167103|gb|ABB24201.1| LSU ribosomal protein L25P [Chlorobium luteolum DSM 273] Length = 202 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R+ K +A LRK G++PA++Y ++++ ++K ++S Sbjct: 1 METIVLGVAPREIK-KNAAGKLRKTGEVPAVVYHKGEATIAVSVNEIALNKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G KD Q DPV+D +IH DF VS + + VPV + G++ Sbjct: 60 IDLKFPDGNVK-RSFIKDVQFDPVTDRVIHTDFQLVSANEVIEMDVPVAVE--GDAIGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNIT 180 +GGKL ++ H +++ ++P +T+D+ L+IG SIH+ +I M + Sbjct: 117 KGGKLQIIRHSLTVKGKPGDMPAHVTIDVTALEIGHSIHVREIPATAFPGLEIMDDRDTP 176 Query: 181 IATIVAPI 188 + T++A Sbjct: 177 VVTVLASK 184 >gi|319891454|ref|YP_004148329.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|317161150|gb|ADV04693.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius HKU10-03] gi|323465376|gb|ADX77529.1| ribosomal protein L25 [Staphylococcus pseudintermedius ED99] Length = 216 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 4/181 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K +G R +R+ G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRGDLRKIREAGKVPAVVYGYGTKNVSVKVDEVEFIKLIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ D + + + H DFL ++ TV VPV I ++PG K+GG Sbjct: 62 ELGVGSKQIKVMVSDYQYDSLKNQITHIDFLAINMTEERTVEVPVHLI--GEAPGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + ++IP+ I VD+++L I DS+ + D+++ + ++ TI ++V Sbjct: 120 VVEQPLFNLEITATPDSIPEYIEVDISELNINDSLSVADVKVSGDFTIENEAEDTIVSVV 179 Query: 186 A 186 A Sbjct: 180 A 180 >gi|313156860|gb|EFR56300.1| ribosomal protein L25, Ctc-form [Alistipes sp. HGB5] Length = 189 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 93/187 (49%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + AV R++ GK +A+ +R+ G +P ++ G+ + ++ ++I +Y+ N Sbjct: 1 MKTISVKAVKREEYGKKAAKAVRREGMVPCVLSGHG-ESVAFSVDPREIKPLIYTPNSYI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 D + + ++ Q PV + ++H DF ++++G V++ +PVR + G+K Sbjct: 60 VEFDFDG--KKEQAVLREAQFHPVREQILHLDFYRIADGKPVSIAIPVRLT--GNAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + N+PD + VD+ L +G +I + D++ E ++ + Sbjct: 116 VGGKLALSARKLVVSALVENLPDELVVDVTTLGVGKTIFVGDLKF-ENLKFVTPATTAVC 174 Query: 183 TIVAPIS 189 + + Sbjct: 175 AVRVTRA 181 >gi|19552165|ref|NP_600167.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|62389830|ref|YP_225232.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum ATCC 13032] gi|71153139|sp|Q8NRV2|RL25_CORGL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|21323705|dbj|BAB98332.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] gi|41325165|emb|CAF19646.1| Ribosomal protein L25 (general stress protein Ctc) [Corynebacterium glutamicum ATCC 13032] Length = 200 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 7/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNF 60 K + A +R + GKGSAR R GQIPA++YG + + + + + + + Sbjct: 1 MAKYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTIDHRTFAALVRQE-G 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L LDI + + K + ++ + H D L + G V V VP + +PG Sbjct: 60 VNAVLELDIEGQKQLTMIKHIDQNVLTFHIDHLDLLAIKRGEKVEVDVP-VIVEGEPAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +IP+ TV + L++G I DI+L T+ + Sbjct: 119 TMWV----QDADTIKVEADVLSIPEEFTVSIEGLELGAQITAADIKLEGDTTLVEDPETL 174 Query: 181 IATIVAP 187 I IV P Sbjct: 175 IVNIVLP 181 >gi|88608536|ref|YP_506196.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] gi|109893370|sp|Q2GEA0|RL25_NEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|88600705|gb|ABD46173.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia sennetsu str. Miyayama] Length = 194 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + + R G+ SA +LR++G +PA+IYG + +A+S +D+SK + + ++ Sbjct: 3 VSIECIPRTSFGRNSANVLRRSGFVPAVIYGKERENINVAISVRDVSKHFAVLSG-SGVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L ++ V+PK Y+L PVS +++H DF+ + VP+ F+N KS I+ G Sbjct: 62 ELSCEGKVYKVVPKAYELHPVSSVVLHLDFV-FAGEHASKFQVPLNFVNSGKSEAIRLGA 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 LN+V V + C A N+P SI VD+ + K+GDSI D+ P+ ++ N +AT+ Sbjct: 121 MLNIVKRTVLVRCTAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATV 180 Query: 185 V 185 V Sbjct: 181 V 181 >gi|126653926|ref|ZP_01725770.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] gi|126589586|gb|EAZ83726.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp. B14905] Length = 211 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 4/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L+A R K + S LR+NG IP ++YG + I L A+ +K + + Sbjct: 1 MNTV-LTANKRQKGRQSSLTQLRQNGAIPGVVYGFQMESTAITLDARVFAKL-LAAHGTK 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ LD+ + ++ + + Q + + H DF ++ + V +PV + G+ Sbjct: 59 SVFQLDVDGKRINAVLSEVQRCALKGNIKHVDFKSINMSEELEVEIPVTVT--GDAIGVA 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L EV + IP++I +D+ ++ IG S+++ DIR + + + T+ Sbjct: 117 DGGFLLQPNREVRIKVKPTEIPETIEIDVTNVAIGTSLYVGDIRQQFSFEILQEDDYTLV 176 Query: 183 TIVAPIS 189 TI P + Sbjct: 177 TITPPSA 183 >gi|228472342|ref|ZP_04057108.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] gi|228276545|gb|EEK15269.1| ribosomal protein L25, Ctc-form [Capnocytophaga gingivalis ATCC 33624] Length = 198 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR G++P ++YG S + A K +Y+ N T Sbjct: 1 MQSITIVGSQRESVGKAASKALRNAGKVPCVLYGGNS-TIHFSADALAFKKLIYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G + + I +D Q DPV+D +IH DF ++ + +T+ VP++ + +PG+ Sbjct: 60 ATIEL--GGKTYNAILQDIQFDPVTDNIIHVDFYELHKDKEITLAVPIQIV--GTAPGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L +V ++ + N+PD + VD++ +++G+ +++ I EK M N + Sbjct: 116 AGGTLRIVNRKLKVKALPENLPDFVPVDISWMEMGNRLYITKIAQ-EKYKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|323700583|ref|ZP_08112495.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. ND132] gi|323460515|gb|EGB16380.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio desulfuricans ND132] Length = 206 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 KL+ R ++GKG R LR +G +P I Y P+ + + K + Sbjct: 5 LKLNVQERSEMGKGPNRRLRASGMVPGIYYDAKGANIPVKVQMVPLQKTYAAVGNSQVFE 64 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L E + + + +PV + H DF V + V VP + +K G+K Sbjct: 65 LVLERGGKTETMPALLWRVRNEPVKGVPEHVDFFGVDLTKEIKVAVPFEIVGNSK--GVK 122 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + + ++C +IP++I +D+ DL + D +H+ED+ PE + + + N I Sbjct: 123 LGGVMEQYREHIEVICKPMDIPEAIVIDITDLDVMDHVHIEDVTFPEGVTPVFEENFAIL 182 Query: 183 TIVA 186 +I A Sbjct: 183 SIAA 186 >gi|169824827|ref|YP_001692438.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302379682|ref|ZP_07268167.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|303234532|ref|ZP_07321169.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] gi|226736323|sp|B0S2F8|RL25_FINM2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|167831632|dbj|BAG08548.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 29328] gi|302312589|gb|EFK94585.1| ribosomal protein L25, Ctc-form [Finegoldia magna ACS-171-V-Col3] gi|302494366|gb|EFL54135.1| ribosomal protein L25, Ctc-form [Finegoldia magna BVS033A4] Length = 212 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 KL RDKVG + R LR IP +IYG +P + + K++ K + Sbjct: 1 MTNYKLDMQKRDKVGSNAVRKLRVKELIPGVIYGKDFEPINVTVDEKELRKVHLM-AGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ + + E VI KD Q P + +H DF ++ G +PV ++ Sbjct: 60 SLIDVKVDGEEHTVIIKDVQKHPFKNHYVHVDFKEIKMGEVANFTIPVVLEGRDEIR--L 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNIT 180 Q L + EV + C N+P+ V + D++ GD+ ++D+ + + ++ Sbjct: 118 QPSVLMQLLDEVEIECLPKNLPNEAAVSVIDMQYGDTFEVKDLDVFKNPDIKVLNDETEA 177 Query: 181 IATIVAPI 188 + ++ P Sbjct: 178 VCSLSEPK 185 >gi|189347042|ref|YP_001943571.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium limicola DSM 245] gi|226736294|sp|B3EDG7|RL25_CHLL2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189341189|gb|ACD90592.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium limicola DSM 245] Length = 196 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRKNG +PA+IY + ++++ ++K ++S Sbjct: 1 METIALGVEPR-VIRKKEAAKLRKNGIVPAVIYHKGEETVAVSVNEIALNKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK + KD Q DPVSD +IH DF + V + VPV S G++ Sbjct: 60 IDLQFPDGK-TLRSFIKDVQFDPVSDRIIHTDFQLFAADEVVEMEVPVAI--SGDSIGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE--KTSSMSQLNIT 180 +GGK+ ++ H +++ N+PD +T+D+ +L +G IH+ +I + S M + Sbjct: 117 KGGKILILRHALTIQGLPANMPDHVTIDVTNLDMGHIIHVREIPMDAYTGLSIMDEPETP 176 Query: 181 IATIVAPI 188 + +I P Sbjct: 177 VISIAPPK 184 >gi|229495615|ref|ZP_04389348.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] gi|229317598|gb|EEN83498.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC 35406] Length = 189 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +LSA +R+ +GK + + LRK G IPA+IYG + ++ + +Y+ Sbjct: 1 MKTFQLSADLREGLGKKATKSLRKQGIIPAVIYG-GEATHHLTVTQDAVRNLIYTPEIF- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L + + + KD Q PV+D ++H DFL+V++ + + VPV G++ Sbjct: 59 -DIDLSVAGKTCKAVLKDIQFHPVTDEILHIDFLEVNKDKAIEMEVPVVLEGHAA--GVR 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + + IP+ + +++ +L++G S+ + + E M+ N + Sbjct: 116 AGGKLVLEMRKLRVKAIYDQIPERLHINVENLELGKSMQVGALSF-EGLEIMNAKNAVVC 174 Query: 183 TI 184 + Sbjct: 175 AV 176 >gi|291514751|emb|CBK63961.1| ribosomal protein L25, Ctc-form [Alistipes shahii WAL 8301] Length = 190 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + AV R GK +A+ +R+ G +P ++ GN + + ++ ++I +Y+ N Sbjct: 1 MKTISVKAVKRADFGKKAAKAIRREGMVPCVLCGNG-ETETFSVDPREIKPLIYTPNSYI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + DI + + ++ Q PV + ++H DF +++EG V++ +PVR + G+K Sbjct: 60 --VEFDIEGKKEQAVLREAQFHPVREEILHLDFYRIAEGKPVSIAIPVRLT--GNAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + ++ + N+PD I VD+ +L +G +I + D+ E ++ + Sbjct: 116 VGGKLALSARKLVVSALVENLPDEIVVDVTELGVGKTIFVGDLEF-ENLKFITPATTAVC 174 Query: 183 TIVAPIS 189 + + Sbjct: 175 AVRVTRA 181 >gi|326334560|ref|ZP_08200771.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693329|gb|EGD35257.1| 50S ribosomal protein L25 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 200 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + R+ VGK +++ LR G++P ++YG + + A +Y+ N T Sbjct: 1 MQSITIVGSQRESVGKAASKALRNAGKVPCVLYGGD-NTIHFSADALAFKNLVYTPNVYT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G + I +D Q DPV+D +IH DF Q+ + +T+ VP++ + +PG+ Sbjct: 60 ATIEL--GGKTYTAILQDIQFDPVTDKIIHVDFYQLHKDKEITLAVPIQIV--GTAPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L VV ++ + +N+PD + +D++ +++G+ ++ I+ + M N + Sbjct: 116 AGGTLRVVNRKLKVKSLPDNLPDFVPIDISWMEMGNRFYVTKIKQDK-YKIMHPDNTVVC 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|299537535|ref|ZP_07050829.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] gi|298727096|gb|EFI67677.1| 50S ribosomal protein L25 [Lysinibacillus fusiformis ZC1] Length = 211 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 6/189 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ L+A R K + S LR+NG IP ++YG + I L A+ +K + + + Sbjct: 1 MNM---VLTASKRQKGRQSSLTQLRQNGGIPGVVYGFQMESTAIMLDARAFAK-MLATHG 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LD+ + ++ + + Q + + H DF ++ + V +PV I + G Sbjct: 57 TKSVFQLDVEGKRINAVLTEVQRCALKGNVKHVDFKSINMSEELEVDIPVTVI--GDAVG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + GG L EV + +IP++I +D+ + IG S+++ DIR + + + T Sbjct: 115 VADGGFLLQPNREVRIKVKPTDIPETIEIDVTHVAIGTSLYVGDIRQQFSFEILQEDDYT 174 Query: 181 IATIVAPIS 189 + TI P + Sbjct: 175 LVTITPPAA 183 >gi|157828786|ref|YP_001495028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933514|ref|YP_001650303.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. Iowa] gi|166223715|sp|A8GSZ5|RL25_RICRS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042367|sp|B0BUI7|RL25_RICRO RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157801267|gb|ABV76520.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908601|gb|ABY72897.1| LSU ribosomal protein L25P [Rickettsia rickettsii str. Iowa] Length = 203 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFL-EKKTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|255034233|ref|YP_003084854.1| 50S ribosomal protein L25/general stress protein Ctc [Dyadobacter fermentans DSM 18053] gi|254946989|gb|ACT91689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dyadobacter fermentans DSM 18053] Length = 188 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +GK A+ LR G +P+++YG + A ++ R Sbjct: 1 MKKHEIVGFKRANLGKVEAQNLRAQGYVPSVLYGGDEQ---VHFYAPNMLFRELLFTPDI 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL+I + I ++ Q PV+D LIHADFLQ+ G + V VP++ S G+ Sbjct: 58 FNVTLNIEGTEYNAILQETQYHPVNDALIHADFLQIIPGKEIKVEVPIKLT--GTSTGVM 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGK+N ++ + A NIPD + VD+ +L +G S+ + ++ E ++ + IA Sbjct: 116 KGGKMNQKLRKLRVQGLAENIPDYVNVDVTELDLGKSVKVGALK-AENFVILTATSNPIA 174 Query: 183 TIVAPIS 189 ++ P + Sbjct: 175 SVDIPRA 181 >gi|296122874|ref|YP_003630652.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] gi|296015214|gb|ADG68453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces limnophilus DSM 3776] Length = 216 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K+S R K+G R LR +G +P I+YG+ +P+P+ + D + Sbjct: 1 MSADS-KVSVKKRQKLGTAETRRLRLSGLVPGIVYGHQQEPQPVVV---DETLIHPIVVS 56 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LD+ L I +D Q+DP + ++ H DF++V VTV V + +PG Sbjct: 57 GHKVVDLDVEGVLEKAIIRDVQVDPFTRLIQHIDFMRVDPNERVTVDVAIELK--GTAPG 114 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 I GG L H + + C A IPDSI V ++DL++G IH+ ++ +P +Q + Sbjct: 115 ILSGGMLEHQLHSIKVDCLAYQIPDSIVVKVSDLQLGGVIHVNELEIPPGVHVQTQGELI 174 Query: 181 IATIV 185 + +V Sbjct: 175 VVHVV 179 >gi|229586949|ref|YP_002845450.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia africae ESF-5] gi|259646695|sp|C3PP47|RL25_RICAE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|228021999|gb|ACP53707.1| 50S ribosomal protein L25 [Rickettsia africae ESF-5] Length = 203 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP +IT+D+ ++ + S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|255526076|ref|ZP_05392999.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296187125|ref|ZP_06855523.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255510262|gb|EET86579.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296048319|gb|EFG87755.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 202 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L R+K AR RK+G+IP IIYG + + +++K++ S Sbjct: 1 MEELELH--KRNKNTVHEARKERKSGKIPGIIYGKNINNLMFEIGELELNKKI-SSTGEH 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L +++G E + ++ Q +PV+ +IH D ++ + + VP+ F+ E+ + Sbjct: 58 GVLEVELGSEKHSTLIREVQRNPVNHKIIHIDLEEIPKNQAIQTDVPILFMGEDFVS--R 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG + V + C IP I VD++ L+IGDS + DI L ++ + + LN IA Sbjct: 116 KGGVVQKERTNVKVQCKYEYIPKHIDVDVSKLEIGDSYRVADIELSQEITFIDDLNTLIA 175 Query: 183 TIV 185 + Sbjct: 176 FVT 178 >gi|15892855|ref|NP_360569.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia conorii str. Malish 7] gi|71153165|sp|Q92H40|RL25_RICCN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|15620041|gb|AAL03470.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7] Length = 203 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S ++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTNKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|51599037|ref|YP_073225.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia garinii PBi] gi|71153124|sp|Q65ZY8|RL25_BORGA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|51573608|gb|AAU07633.1| general stress protein [Borrelia garinii PBi] Length = 182 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRI-LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNDVLHLKIKSNEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFIKDVSENIASKLIYHIDFYEVDRRVELEKYVPIKLI--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNI 179 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + N+ Sbjct: 117 VKEGGILTVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVRLAENDENL 176 Query: 180 TIATI 184 + TI Sbjct: 177 EVVTI 181 >gi|15923491|ref|NP_371025.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50] gi|15926178|ref|NP_373711.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus N315] gi|21282185|ref|NP_645273.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MW2] gi|49485365|ref|YP_042586.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MSSA476] gi|57650042|ref|YP_185433.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus COL] gi|82750208|ref|YP_415949.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus RF122] gi|87162260|ref|YP_493188.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194261|ref|YP_499053.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266960|ref|YP_001245903.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH9] gi|150393006|ref|YP_001315681.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus JH1] gi|151220676|ref|YP_001331498.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. Newman] gi|156978829|ref|YP_001441088.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu3] gi|161508741|ref|YP_001574400.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142307|ref|ZP_03566800.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315230|ref|ZP_04838443.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730969|ref|ZP_04865134.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253735236|ref|ZP_04869401.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|255005294|ref|ZP_05143895.2| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424613|ref|ZP_05601041.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257427279|ref|ZP_05603680.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257429916|ref|ZP_05606302.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257432618|ref|ZP_05608980.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257435522|ref|ZP_05611572.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257794258|ref|ZP_05643237.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|258407225|ref|ZP_05680370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|258420808|ref|ZP_05683744.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|258424463|ref|ZP_05687342.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|258429618|ref|ZP_05688292.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|258446112|ref|ZP_05694273.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|258448020|ref|ZP_05696150.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|258452818|ref|ZP_05700813.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|258453834|ref|ZP_05701807.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|262049986|ref|ZP_06022845.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262052530|ref|ZP_06024727.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|269202121|ref|YP_003281390.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|282895109|ref|ZP_06303329.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|282903087|ref|ZP_06310979.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282904876|ref|ZP_06312736.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282907823|ref|ZP_06315661.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910139|ref|ZP_06317945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282913329|ref|ZP_06321120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282915819|ref|ZP_06323587.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282918282|ref|ZP_06326022.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282923033|ref|ZP_06330719.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282925576|ref|ZP_06333229.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|283768936|ref|ZP_06341845.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283957291|ref|ZP_06374749.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|284023510|ref|ZP_06377908.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus 132] gi|293500378|ref|ZP_06666230.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|293509316|ref|ZP_06668032.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|293515905|ref|ZP_06670595.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|294850361|ref|ZP_06791094.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|295407391|ref|ZP_06817188.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295427035|ref|ZP_06819672.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276154|ref|ZP_06858661.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MR1] gi|297246471|ref|ZP_06930311.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|304380518|ref|ZP_07363195.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|68053029|sp|Q5HIH4|RL25_STAAC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153660|sp|Q99WA2|RL25_STAAM RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153661|sp|Q7A7B3|RL25_STAAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153663|sp|Q6GBY7|RL25_STAAS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153664|sp|Q7A1S4|RL25_STAAW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893398|sp|Q2FJE0|RL25_STAA3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109893399|sp|Q2YVY4|RL25_STAAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|13700391|dbj|BAB41689.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus N315] gi|14246269|dbj|BAB56663.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu50] gi|21203621|dbj|BAB94321.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MW2] gi|49243808|emb|CAG42233.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284228|gb|AAW36322.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus COL] gi|82655739|emb|CAI80138.1| 50S ribosomal protein L25 general stress protein [Staphylococcus aureus RF122] gi|87128234|gb|ABD22748.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201819|gb|ABD29629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740029|gb|ABQ48327.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus JH9] gi|149945458|gb|ABR51394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus subsp. aureus JH1] gi|150373476|dbj|BAF66736.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus str. Newman] gi|156720964|dbj|BAF77381.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu3] gi|160367550|gb|ABX28521.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725281|gb|EES94010.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726796|gb|EES95525.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus TCH130] gi|257272640|gb|EEV04760.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 55/2053] gi|257275930|gb|EEV07398.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 65-1322] gi|257279432|gb|EEV10027.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397] gi|257282483|gb|EEV12616.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410] gi|257285159|gb|EEV15276.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus M876] gi|257788230|gb|EEV26570.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781] gi|257841183|gb|EEV65632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A9763] gi|257843200|gb|EEV67613.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719] gi|257845332|gb|EEV69367.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635] gi|257849677|gb|EEV73644.1| ribosomal protein L25 [Staphylococcus aureus A9299] gi|257855089|gb|EEV78031.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300] gi|257858710|gb|EEV81583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A6224] gi|257859504|gb|EEV82357.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus A5948] gi|257864005|gb|EEV86760.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Staphylococcus aureus A5937] gi|259159577|gb|EEW44624.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3] gi|259161921|gb|EEW46504.1| 50S ribosomal protein L25 [Staphylococcus aureus D30] gi|262074411|gb|ACY10384.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus ED98] gi|269940072|emb|CBI48448.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus TW20] gi|282314552|gb|EFB44939.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C101] gi|282317848|gb|EFB48217.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus C427] gi|282320310|gb|EFB50652.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus D139] gi|282322800|gb|EFB53120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899] gi|282325987|gb|EFB56293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WBG10049] gi|282328299|gb|EFB58574.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331993|gb|EFB61502.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus Btn1260] gi|282592480|gb|EFB97492.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765] gi|282596513|gb|EFC01473.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus C160] gi|282762527|gb|EFC02667.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117] gi|283461117|gb|EFC08203.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19] gi|283469793|emb|CAQ49004.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ST398] gi|283791215|gb|EFC30025.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus A017934/97] gi|285816200|gb|ADC36687.1| LSU ribosomal protein L25p [Staphylococcus aureus 04-02981] gi|290921313|gb|EFD98371.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015] gi|291096338|gb|EFE26598.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus 58-424] gi|291467861|gb|EFF10371.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus M809] gi|294822785|gb|EFG39221.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754] gi|294967748|gb|EFG43780.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819] gi|295129038|gb|EFG58667.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297176658|gb|EFH35920.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796] gi|298693831|gb|ADI97053.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus ED133] gi|302332214|gb|ADL22407.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus JKD6159] gi|302750392|gb|ADL64569.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340963|gb|EFM06886.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312828996|emb|CBX33838.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128629|gb|EFT84632.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS03] gi|315196184|gb|EFU26540.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus CGS01] gi|323438733|gb|EGA96473.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O11] gi|323442055|gb|EGA99690.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus O46] gi|329313220|gb|AEB87633.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus T0131] gi|329725045|gb|EGG61540.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21172] gi|329729782|gb|EGG66179.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21189] gi|329731082|gb|EGG67454.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp. aureus 21193] Length = 217 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 4/181 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LRK+G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 ELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+V Sbjct: 120 VVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVV 179 Query: 186 A 186 A Sbjct: 180 A 180 >gi|254416190|ref|ZP_05029945.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] gi|196177123|gb|EDX72132.1| ribosomal protein L25, Ctc-form [Microcoleus chthonoplastes PCC 7420] Length = 210 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 E K+ R + K + LR+ G IPA +YG+ ++ + + AK L + T Sbjct: 2 EVKVECHKRAEGSK--PKALRREGLIPATLYGHKGAESVALTVEAKAAETLLKQADINHT 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++I + ++ Q P IL H F V+ T+ + +PV + + G+ Sbjct: 60 AVQVNIPDLSWNGKALLREVQTHPWKPILYHLSFFSVASQDTIQISLPVNLV--GTAFGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG L V E+ + C ++IP++I VD+++L IG S+H+ +I LP ++M + Sbjct: 118 KQGGILEHVMTELQVECAPDSIPEAIEVDISNLDIGASLHVHEILLPSGATAMDDPQRPV 177 Query: 182 ATIV-AP 187 I+ AP Sbjct: 178 VNILGAP 184 >gi|311746128|ref|ZP_07719913.1| ribosomal protein L25 [Algoriphagus sp. PR1] gi|126576349|gb|EAZ80627.1| ribosomal protein L25 [Algoriphagus sp. PR1] Length = 196 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 4/187 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R + + +R +G +P ++YG P+ I A I R Sbjct: 1 MKTLEIIGFKRANLDSATLNEIRDSGNVPCVVYGPGI-PEQIHFYAPAILFRDLIYTPEV 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+I +V + K+ Q PVS++L+HADF+ + + +PV+ SPG+ Sbjct: 60 HVVELNIEGTIVKAVLKEAQFHPVSEVLLHADFMAFTNDKPIKFEIPVKV--SGSSPGLA 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGKL + + A ++PD I D++ L +G S + +++ E ++ N+++ Sbjct: 118 KGGKLEFKTRSLKVKGLAGDLPDYIEADISKLDLGKSFKVSELK-AEGFEILTSPNVSLV 176 Query: 183 TIVAPIS 189 TI P + Sbjct: 177 TIGIPRA 183 >gi|148654602|ref|YP_001274807.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus sp. RS-1] gi|226736358|sp|A5UQF4|RL25_ROSS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|148566712|gb|ABQ88857.1| LSU ribosomal protein L25P [Roseiflexus sp. RS-1] Length = 218 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 4/186 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M +K LS R +GK + LR++G +PA +YG +P + + A+ Sbjct: 1 MSEK-FTLSLEPRSVLGKK-VKRLRRSGILPATVYGKGIEPIAVQIDARSFQAIYRQAGR 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I G + Q PV+ +IHADF V V V VP+ ++ Sbjct: 59 TSLIELHIAGHPPLAAFIHALQRHPVTRDIIHADFRAVDLRQEVEVAVPLHIEGKSPLVE 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQLNI 179 + LN V + + IP ITVD++ L D SIH D+ LP + ++ Sbjct: 119 SGEA-VLNQVLSTIEIRALPTAIPAHITVDISALDSFDKSIHARDLMLPPGVTLVTPGEE 177 Query: 180 TIATIV 185 + + Sbjct: 178 LVVGLA 183 >gi|298246012|ref|ZP_06969818.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] gi|297553493|gb|EFH87358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ktedonobacter racemifer DSM 44963] Length = 212 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 4/188 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 K+ ++ R+ GK + LR+ G IP I G+ +D I AK + + Sbjct: 1 MAKQIEMDVAPREVFGKK-TKSLRRQGLIPGNIGGHKADSVAIQFEAKVFKRLQHENRAG 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + GK V+ + + VS + H DF +VS V++ VP+ F+ +SP + Sbjct: 60 SIYALNLPGKGAETVLVHHVEHNTVSGEIQHVDFSRVSMDEQVSIKVPLHFV--GESPAL 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNIT 180 K + + + C A++I +I VDL+ LK + D+I+ DI+LP+ + + Sbjct: 118 KDTKGTLLHMDALEVQCRASDILPAIEVDLSPLKTLDDTIYARDIKLPKGFKLVGDPEES 177 Query: 181 IATIVAPI 188 +A + P Sbjct: 178 VAKVAPPK 185 >gi|312876056|ref|ZP_07736045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] gi|311797254|gb|EFR13594.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caldicellulosiruptor lactoaceticus 6A] Length = 198 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E L RD K + LRK G IP + YG+ P +S K+ K + K + Sbjct: 2 EPVLVYNRRDVFTKSNLNKLRKEGYIPTVAYGDDIKSLPGYVSKKEFEKLYHQK-GLAGK 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + I + + K+ Q +IH DF +SE + V VP+ F N +G Sbjct: 61 IKISIDGKERTALIKEVQTHYTKGNIIHVDFQILSENKPIYVEVPIIFENAEILKS--RG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L V + +IP+ + +DL + +I + DI+LPE L+ +A I Sbjct: 119 LVLQRQMDTVEIEGLPKDIPEHLVIDLMGYEKPTAIKLRDIKLPEGIKITEDLDEVVAVI 178 >gi|212637894|ref|YP_002314414.1| 50S ribosomal protein L25/general stress protein Ctc [Anoxybacillus flavithermus WK1] gi|226736278|sp|B7GFH9|RL25_ANOFW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|212559374|gb|ACJ32429.1| Ribosomal protein L25 (general stress protein Ctc) [Anoxybacillus flavithermus WK1] Length = 208 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R + + +RK G IPA++YG ++ +P+ + A + K+L + +L Sbjct: 5 LQLQLRTDHRRSYVKQMRKQGHIPAVLYGKTTNSQPVFVDAAEFLKQLRATGGT-GLLDA 63 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + +I +D Q P+ +IH DFL V + + VHVP+ + ++ G+K GG L Sbjct: 64 KMNDNHIRIIVRDMQKHPIRHDIIHIDFLAVDAKTEIDVHVPIHLV--GEAAGVKDGGVL 121 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 H++S+ +NIP SI VD+ +L++GD I + I+ IA+I+ P Sbjct: 122 QQAMHQLSIRVLPSNIPPSIDVDITNLQVGDVITVSHIQTNGAYEINHDPTEVIASILPP 181 Query: 188 I 188 Sbjct: 182 K 182 >gi|295398795|ref|ZP_06808798.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] gi|294972963|gb|EFG48787.1| 50S ribosomal protein L25 [Aerococcus viridans ATCC 11563] Length = 211 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 3/182 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A RD G +A+ LRK +P ++Y + DP I+LS D+ + + ++ Sbjct: 1 MKFTAQKRDGAGTSAAKQLRKEDLVPGVVYASDLDPINISLSVSDVEQIRREL-GLNSVF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + V ++ + + + + +G + +P+ + N+ + G Sbjct: 60 DLELDGKTHTVYVREISQSALKPTIYNISLQAIKKGQK--LEMPLSIVIVNEDALADKEG 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + E++++ PDS+ VD+ L IGDS+ D++L ++ + I Sbjct: 118 VASTTTLEINVVADPATAPDSVEVDVTGLAIGDSVTAGDLKLASDIELVTDAEEVVVAIS 177 Query: 186 AP 187 AP Sbjct: 178 AP 179 >gi|307299263|ref|ZP_07579064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915059|gb|EFN45445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotogales bacterium mesG1.Ag.4.2] Length = 214 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A +R+ K AR L G+IPA++YG + P++L +I + + T Sbjct: 1 MHEINLVAELRNGEMK--ARSLLNQGKIPAVVYGPELETVPVSLDKVEILRIMNRIA-ET 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T + + I + H K Q D V+D +IH DF S G + + +P+R G++ Sbjct: 58 TSVVISIDGKEYHTFLKGVQRDKVTDSVIHLDFYVPSSGHKMELRIPIRLK--GTPIGVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG ++ + +E+ + +I + I VD++ +G + + D+ +PE + I Sbjct: 116 KGGIVDHIINELPVSVLPKDIVEEIIVDVSSFDVGHVLRVGDLEIPEGIKPLLDDEDAIM 175 Query: 183 TIVAPISG 190 I P + Sbjct: 176 LIALPRAA 183 >gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter diazotrophicus PAl 5] gi|189042360|sp|A9HC01|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5] gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gluconacetobacter diazotrophicus PAl 5] Length = 206 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLD 84 R++GQ+PA+IYG +P +AL + + + + + + + + + + ++ QL Sbjct: 24 RRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLH 83 Query: 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIP 144 PVSD IH DF +++ G V V V + F E+KSPGIK+GG LN+V H V + NIP Sbjct: 84 PVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIP 143 Query: 145 DSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVAPIS 189 +S TVDL+ L I D++ +D++ + Q N IAT+ AP + Sbjct: 144 ESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQIPNFVIATVAAPSA 189 >gi|172040259|ref|YP_001799973.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium urealyticum DSM 7109] gi|226736300|sp|B1VFK0|RL25_CORU7 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171851563|emb|CAQ04539.1| 50S ribosomal protein L25 [Corynebacterium urealyticum DSM 7109] Length = 212 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 7/184 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E + V+R + GKG++R LR++G+IP ++YGN DP + + D+ + ++ + Sbjct: 1 MAELTRIEGVLRTEFGKGASRRLRRDGRIPLVVYGNELDPVHVHVDTLDLHALVRNE-GV 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L+I E V+ K + ++ + HAD L V G V V VP +PG Sbjct: 60 NAVFELNIDGEDNLVMVKAIDQNVLTLDIDHADLLNVKRGERVEVEVP-VIHEGLPAPGA 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++V+ EV +L +IP+ I +D+N L+IG+ I +D+++P +S + Sbjct: 119 MVVQDVDVLLLEVDVL----DIPEEIVLDINGLEIGEQILAKDVKMPSNAVLVSDAEELV 174 Query: 182 ATIV 185 IV Sbjct: 175 INIV 178 >gi|159027424|emb|CAO89389.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 185 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 7/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + + R LR+ G IPA++YG+ ++ + + K L + T Sbjct: 2 QVSVECQKRPEN--INPRALRRQGLIPAVLYGHNGTESVSLVVGEKAALTLLKKASVNNT 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ +++ + ++ Q P L H F VS + + VP++ I ++ G Sbjct: 60 LVDVNVPEMPWTGKALLQEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAI--GEAIGT 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + +EV++ C A+NIP+ I D++ + +G S+ + D+++PE + + T+ Sbjct: 118 KQGGLIEQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTLKDDPHTTV 177 Query: 182 ATIVAPI 188 IVA Sbjct: 178 FAIVAAK 184 >gi|198277115|ref|ZP_03209646.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] gi|198269613|gb|EDY93883.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135] Length = 198 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP----KPIALSAKDISKRLYSK 58 K ++ +R + GK + R LRK+ +P ++YG D + R Sbjct: 1 MKSIEIKGSLRTETGKKATRELRKDNGVPCVLYGTQKDENGNQVATHFTVPTEGLRNLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ + Sbjct: 61 TPHIYVVDLNIDGKIVNAIMKDIQFHPVTDKILHVDFYQIDESKPIVMEVPVKLE--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GGKL + ++ + N IP+ + VD+ L +G +I + +++ E ++ Sbjct: 119 EGVKAGGKLALQIRKLKVKALYNVIPERLVVDVTPLGLGKTIKVGELKY-EGLELLNAKE 177 Query: 179 ITIATI 184 + + Sbjct: 178 AVVCAV 183 >gi|297587210|ref|ZP_06945855.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] gi|297575191|gb|EFH93910.1| 50S ribosomal protein L25 [Finegoldia magna ATCC 53516] Length = 211 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 KL RD+VG + R LR +P +IYG +P + + K++ K + Sbjct: 1 MTNYKLDMQKRDEVGSNAVRKLRVKEMVPGVIYGKDLEPINVCVDEKELRKVHLM-AGTS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ + + E VI ++ Q P + +H DF + G +PV ++ Sbjct: 60 SLIDVKVDGEDHTVIIREVQKHPFKNQYVHVDFKAIKMGEVANFTIPVVLEGRDEIR--V 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNIT 180 Q L + E+ + C N+P+ V + D++IG+++ ++D+ + +++ Sbjct: 118 QPSVLMQLLDEIEIECLPKNLPNEAVVSVVDMQIGETLEVKDLDVFKNADIKVLNEETEA 177 Query: 181 IATIVAPI 188 + ++ P Sbjct: 178 VCSLSEPK 185 >gi|49482728|ref|YP_039952.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus aureus subsp. aureus MRSA252] gi|71153662|sp|Q6GJH0|RL25_STAAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|49240857|emb|CAG39524.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MRSA252] Length = 217 Score = 124 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 4/181 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LRK+G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREV-CRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 ELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPVQLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + + +NIP++I VD+ +L I DS+ + D+++ + ++ T+V Sbjct: 120 VVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGDFKIENDSAESVVTVV 179 Query: 186 A 186 A Sbjct: 180 A 180 >gi|291286406|ref|YP_003503222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] gi|290883566|gb|ADD67266.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio acetiphilus DSM 12809] Length = 207 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 4/187 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + K A R ++ G +R+ G +PAII D + L+AKDI K Sbjct: 1 MIQTIKWDATKRKQMTDGELNDMRRQGFVPAIISIRGEDSVSVFLNAKDIQK--RPFGNF 58 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + KE K Q + SD +IHAD + +G + + V F+ + G+ Sbjct: 59 RIELKVKGIKEPFDCFLKTLQYNHTSDKVIHADLQALVKGQEIDIDVHFDFV--GEPAGL 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG LN V + NIP+ ITVD++ L IGDSIH+ DI+ E+ + + TI Sbjct: 117 KMGGILNTGHTSVKIRTLPRNIPEKITVDISGLNIGDSIHISDIKFSEEHTLLEPTEGTI 176 Query: 182 ATIVAPI 188 A + P Sbjct: 177 AYVSEPR 183 >gi|163783324|ref|ZP_02178317.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] gi|159881432|gb|EDP74943.1| general stress protein Ctc [Hydrogenivirga sp. 128-5-R1-1] Length = 201 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 5/178 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R K + +R+ G IP IYG + +SAKD + + F Sbjct: 1 MKRVSVKLSERVPGKKSETKRMRREGFIPVEIYGKGVNNSHAWMSAKDFLSLPHGETF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ + I KD Q + D IH D ++ + + V VP+ F + Sbjct: 59 -LIETEVNGDKRVCILKDIQFGWLGDNPIHVDLYDLANVTEIEVEVPIEFTGTPAGVELG 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ + V ++PD I +D++ L +G+++H+ D+ PE + T Sbjct: 118 GTFEVLMHSFTV--KAKPADLPDKIVIDVSGLGLGEALHVRDVAPPEGCVILDNPEET 173 >gi|288928358|ref|ZP_06422205.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] gi|288331192|gb|EFC69776.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str. F0108] Length = 200 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 93/186 (50%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 +E ++ R +GK +++ +RK G IP +YG + P+ ++ + R Sbjct: 1 MREINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGLPEALSFAVPMADLRKVVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ LDI + I K+ Q PV+D L+H DF +++E ++ + +PV + + Sbjct: 61 TPHIYVVNLDIDGQKHTAIMKELQFHPVTDALLHVDFYEINEEKSIAIGIPVNLV--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG+L++ ++ + P IP+ + +D+ L IG SI ++ E ++ + Sbjct: 119 QGVRDGGRLSLSIRKLMVKAPYKQIPEKLDIDVTALTIGKSIKAGELSF-EGLEVVTPKD 177 Query: 179 ITIATI 184 + + T+ Sbjct: 178 VIVCTV 183 >gi|166364701|ref|YP_001656974.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] gi|189042362|sp|B0JXF5|RL25_MICAN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166087074|dbj|BAG01782.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843] Length = 185 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + + R LR+ G IPA++YG+ ++ + + K L + T Sbjct: 2 QVSVECQKRPEN--INPRALRRQGLIPAVLYGHNGTESISLVVGEKAALTLLKKASVNNT 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ +++ + ++ Q P L H F VS + + VP++ I ++ G Sbjct: 60 LVDVNVPEMPWTGKALIQEVQSHPWKRNLYHLSFFSVSAHGKLDIVVPIKAI--GEAIGT 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG + +EV++ C A+NIP+ I D++++ +G S+ + D+++PE + + T+ Sbjct: 118 KQGGLIEQFVNEVNVSCIADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTLKDDPHTTV 177 Query: 182 ATIVAPI 188 IVA Sbjct: 178 FAIVAAK 184 >gi|34581435|ref|ZP_00142915.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] gi|28262820|gb|EAA26324.1| 50S ribosomal protein L25 [Rickettsia sibirica 246] Length = 203 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|238650660|ref|YP_002916512.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] gi|259646696|sp|C4K1L3|RL25_RICPU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|238624758|gb|ACR47464.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia peacockii str. Rustic] Length = 203 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 1 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFI 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 61 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGV 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ + S+ I LP+ S +++ + Sbjct: 120 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKEFVL 179 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 180 ATIIGRRGA 188 >gi|256420579|ref|YP_003121232.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] gi|256035487|gb|ACU59031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chitinophaga pinensis DSM 2588] Length = 193 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + +R + GK + R R GQ+P +IYG ++ + A +Y+ +F Sbjct: 1 MKTITIEGQLRSEFGKKATRQARSEGQVPCVIYG-GAETVSFSAPAVSFKNLIYTPDFQL 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L G ++ + KD Q D V+D L H DFL++ E V V +P+R + +S G+K Sbjct: 60 AEIKL--GSKVYRCVLKDKQFDTVTDELSHIDFLELVEDKPVAVTLPIRIV--GQSEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL V + + + ++I V +++L++ +I +ED+ + E ++ I IA Sbjct: 116 AGGKLVVKIKALKVKALPKYLRENIEVSIDNLELNGNIRVEDV-VAENIEILNSPRIPIA 174 Query: 183 TIVAPI 188 ++V Sbjct: 175 SVVMTR 180 >gi|295694755|ref|YP_003587993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] gi|295410357|gb|ADG04849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus tusciae DSM 2912] Length = 212 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + L A R + + LR++G+IP ++YG +P P+A+ + K + Sbjct: 1 MSAQVLPLEA--RADLRRSVLTHLRRSGRIPGVVYGKGREPVPVAVEEALLVKMQTGQET 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + L G+ + + ++ Q DPV+ ++H DF V V V VPV+ + Sbjct: 59 ALVDIELP-GQGRLPAVIQEIQRDPVTRKILHVDFHVVMLDEPVDVEVPVQVQGIEEVD- 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 K+G V+ + + C IP+ + VD++ + GD I D++LP+ + + + Sbjct: 117 -KRGLVAQVLLRHLRIRCLPTEIPEHLRVDVSRAEEGDVIRAADVQLPDGAHLLEEADEV 175 Query: 181 IATIV 185 + I Sbjct: 176 VVNIS 180 >gi|325971763|ref|YP_004247954.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] gi|324027001|gb|ADY13760.1| 50S ribosomal protein L25 [Spirochaeta sp. Buddy] Length = 211 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 7 KLSAVMR-DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A +R + G AR L + +IPA+IYG +P I L +++ + ++ + T +L Sbjct: 6 SLKAELRTEDFGSAGARRLLRTKRIPAVIYGKN-EPVHIILDSREFTNKMRHFS-ETALL 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + +GK+ + KDYQ + + + H DF +V+ G + V + G K+GG Sbjct: 64 KISVGKKSYECLMKDYQENLMRAEIKHVDFFEVTRGQVLRTLVSIVLK--GNPVGTKEGG 121 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L+ V HEV + C ++P ++ D+ LKI S+H++D+ +P + L T+A++ Sbjct: 122 VLDQVMHEVEIECFPKDLPAALEADVTSLKINQSLHLKDVVIPANVKVLDDLAKTVASV 180 >gi|260912295|ref|ZP_05918846.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] gi|260633596|gb|EEX51735.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str. F0295] Length = 200 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 +E ++ R +GK +++ +RK G IP +YG + P+ ++ + R Sbjct: 1 MREINVAGKSRSNLGKKASKEMRKEGLIPCNLYGEKKNADGQPEALSFAVPMAELRKVVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ LDI + I K+ Q PV+D L+HADF +++E ++ + +PV + + Sbjct: 61 TPHIYVVNLDIDGQKHTAIMKELQFHPVTDALLHADFYEINEEKSIAIGIPVNLV--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG+L++ ++ + P IP+ + +D+ L IG SI ++ E ++ + Sbjct: 119 QGVRDGGRLSLSIRKLVVKAPYKQIPEKLDIDVTALTIGKSIKAGEVSF-EGLEVVTPKD 177 Query: 179 ITIATI 184 + + T+ Sbjct: 178 VIVCTV 183 >gi|110639011|ref|YP_679220.1| 50S ribosomal protein L25/general stress protein Ctc [Cytophaga hutchinsonii ATCC 33406] gi|122966643|sp|Q11RT6|RL25_CYTH3 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110281692|gb|ABG59878.1| LSU ribosomal protein L25P [Cytophaga hutchinsonii ATCC 33406] Length = 192 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +GK ++ LR + +P ++YG S + +Y+ T Sbjct: 1 MKQVEIIGYSRANLGKKGSKDLRLDSNVPCVLYGGESQ-LHFHVPMFLFRDIIYTGVACT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L+ + + ++ Q P++++L+H DFL + + V +++PV+F SPG+ Sbjct: 60 VLLNLEGKQYK--CVVQEVQFHPINEMLLHVDFLLLDDKKQVKMNIPVKFE--GTSPGVI 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGKL + + ++PD I D++ L++ S+ + DI+ + ++ +I + Sbjct: 116 KGGKLVQKVATLQVKAFPKDLPDVILADISQLELAKSVKVGDIKT-NNYTILNAKSIPVC 174 Query: 183 TIVAPIS 189 T+ P S Sbjct: 175 TVTIPRS 181 >gi|330993035|ref|ZP_08316973.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] gi|329759805|gb|EGG76311.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1] Length = 205 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 2/166 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQL 83 R+ G +P +IYG +P IAL + + + L+ + + I + + K VH + ++ QL Sbjct: 24 RRAGLVPGVIYGAGQEPVLIALDPRIVYRELHKSGWRSRIYDISVEKGASVHALLREVQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD IH D+ +++ G V V V +RF E SPG+K+GG +N+V H V ++ NI Sbjct: 84 HPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVKRGGVMNIVRHTVDVVVDPANI 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATIVAPI 188 P+ T DL+ L D++ ED++ E + + N IA + P Sbjct: 144 PEFFTADLSKLDFHDNVRWEDLKGTENVTPVQHDNNFVIANVAPPS 189 >gi|320450996|ref|YP_004203092.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] gi|320151165|gb|ADW22543.1| 50S ribosomal protein L25, Ctc-form [Thermus scotoductus SA-01] Length = 206 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ K +A LR+ G++P +IY N + + + + K + I Sbjct: 2 EYRLKAQYREGE-KPAA--LRRAGKLPGVIY-NKHLNRKVYVELGEFDKVFRQASIHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + + LD H DF V V +++P+RF+ G+++G Sbjct: 58 VLELPDGQELPTLVRQVNLDKRRRRPEHVDFY-VLSDEPVEMYIPLRFV--GTPQGVREG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA + Sbjct: 115 GVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAISPEETIAAV 174 Query: 185 VAP 187 V P Sbjct: 175 VPP 177 >gi|157964747|ref|YP_001499571.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia massiliae MTU5] gi|157844523|gb|ABV85024.1| 50S ribosomal protein L25 [Rickettsia massiliae MTU5] Length = 211 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E +L A R + G G+AR LR+ G++PAIIYG P I+L K+I+K F+ Sbjct: 9 MSEILELEAESRTEFGTGAARALRRAGRVPAIIYGAGKIPVSISLEEKEITKYYRKPAFI 68 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ L I K+ V+PK +L PV+DI+ H DF+ + E T + VPV + + ++ G+ Sbjct: 69 SQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEE-KTQKMEVPVVYEGKERALGV 127 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG N+V V+LLC NNIP ++T+D+ ++ I S+ I LP+ S +++ + Sbjct: 128 KRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKEFVL 187 Query: 182 ATIVAPISG 190 ATI+ Sbjct: 188 ATIIGRRGA 196 >gi|145295097|ref|YP_001137918.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium glutamicum R] gi|166223676|sp|A4QCR9|RL25_CORGB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|140845017|dbj|BAF54016.1| hypothetical protein [Corynebacterium glutamicum R] Length = 202 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 7/187 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNF 60 K + A +R + GKGSAR R GQIPA++YG + + + + + + + Sbjct: 1 MAKYQTIEAAVRSEFGKGSARRARVAGQIPAVVYGADVESNLHVTVDHRTFAALVRQE-G 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + +L LDI + + K + ++ + H D L + G V V VP + +PG Sbjct: 60 VNAVLELDIEGQKHLTMIKHIDQNVLTFNIDHLDLLAIKRGEKVEVDVP-VIVEGEPAPG 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + +IP+ V + L+ G + DI L T+ + Sbjct: 119 TMWV----QDADTIKVEADVLSIPEEFKVSIEGLEFGAQVTAADIELDGDTTLVEDPETL 174 Query: 181 IATIVAP 187 I IV P Sbjct: 175 IVNIVYP 181 >gi|145219519|ref|YP_001130228.1| 50S ribosomal protein L25/general stress protein Ctc [Prosthecochloris vibrioformis DSM 265] gi|189042365|sp|A4SE17|RL25_PROVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|145205683|gb|ABP36726.1| LSU ribosomal protein L25P [Chlorobium phaeovibrioides DSM 265] Length = 203 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A +RK+G +PA++Y + ++++ +++K +++ Sbjct: 1 METTVLGVQPR-IIKKNDAEKIRKSGNVPAVVYHKGEETVAVSVNELELNKLVHTAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK K Q PV+D +IH DF + + + VPV +S G+ Sbjct: 60 IDLRFPDGKVK-RSFIKAVQFHPVTDRIIHTDFQLFAADEVIEMDVPVSVT--GESVGVD 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 +GGKL ++ H ++L ++PD + +D+ D++IG +H++DI E M Sbjct: 117 KGGKLQILRHNLTLKGKPTDMPDHLVIDITDMEIGSIVHVKDIPAQSYENLEIMIDPETP 176 Query: 181 IATIVAPI 188 + ++VAP Sbjct: 177 VVSVVAPK 184 >gi|332877495|ref|ZP_08445242.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684601|gb|EGJ57451.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 197 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 7/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 KE + R GK +AR +RK +P +YG D P + + + R Sbjct: 1 MKEINVKGTARAAFGKKAAREIRKANAVPCNLYGEAKDENGAPVALPFTVTNDELRNLIY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + L+I + I K+ Q PV D ++H DF ++++ + + VP++ + Sbjct: 61 SPDIYAVNLNIDGKECKAILKEIQFHPVKDNVLHVDFYEITDTKPIVMEVPIKL--NGLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG+L ++ + NIP+ + +D+ L +G +I + ++ E ++ Sbjct: 119 EGVKAGGRLAASVRKLKVKAVYTNIPERLNIDVTSLGLGKTIKVGELHF-EGLELVTSKE 177 Query: 179 ITIATIVAPISG 190 + + + Sbjct: 178 VVVCQVKMTRGA 189 >gi|297621050|ref|YP_003709187.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] gi|297376351|gb|ADI38181.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044] Length = 186 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL R K +R LR G+IPA++Y D + IA+ A D L + Sbjct: 1 MKLKFEQRTAEKKSDSRSLRNLGKIPAVLYVRGKDSEAIAVDAADFETVLRTVKKGRLST 60 Query: 66 T----LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T +D + +V+ KD Q + ++H DF ++ + + V VP+ + E GI Sbjct: 61 TKLALVDGTGKERNVLVKDIQYHVTTYNVLHLDFEELLDNVKIKVKVPIECVGEVDCVGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG L V + + C ++P+ +D+ L + +S + D+ +PE + LN Sbjct: 121 KLGGVLRRVIRYLRVHCLPKDLPEFFKMDVKTLGLKESRKLSDLEIPETVRPLMDLNEVA 180 Query: 182 ATIV 185 TI Sbjct: 181 VTIA 184 >gi|167044231|gb|ABZ08912.1| putative ribosomal L25p family protein [uncultured marine microorganism HF4000_APKG5H11] Length = 297 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 79/190 (41%), Gaps = 4/190 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKR-LYSKN 59 M ++ R+ +GK R LR+ G +P +YG +P+ + + + + + Sbjct: 80 MTTNAVEIELDPRELMGKKVGR-LRRAGIVPVHLYGPGMEPRALQCNTSQLIRVLAKAGG 138 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 +T+ ++ Q DP D L+H D L VT VP+ + E+ Sbjct: 139 ATPIHITIQGESGTHLAFAREIQWDPKRDDLLHVDLLAADISRPVTAQVPIILVGESAGA 198 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLN 178 G ++ + V + +P I +D++ ++ DS I + D+ +PE + +S + Sbjct: 199 RTVSGTVMHQLR-TVDIQALPLEMPSQIELDISVMEEPDSVIRVSDLAIPENATLLSDVE 257 Query: 179 ITIATIVAPI 188 + I P Sbjct: 258 DLVVRIELPR 267 >gi|312889384|ref|ZP_07748938.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] gi|311298261|gb|EFQ75376.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mucilaginibacter paludis DSM 18603] Length = 194 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+LLR G++PA++YG + +A+S D+ +Y+ Sbjct: 1 MKSITISGSPRESVGKRDAKLLRYEGKVPAVLYGGATQ-THLAVSVTDLKAVVYTPVVHF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++ + I KD Q P+++ +IH DFL++ VT+ +P+R SPG+K Sbjct: 60 --INLEVAGKTAQAIIKDIQFHPLTEEIIHVDFLELDAAKPVTIEIPIRLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + + D+I V + L++G S+ + D++L EK + + TI Sbjct: 116 TGGKLVQKLRKLRIKALPGDHIDNIDVSIATLEVGKSVRVSDLKL-EKLIITNAIEDTIV 174 Query: 183 TIVAPIS 189 ++ + Sbjct: 175 SVTTSRA 181 >gi|320536078|ref|ZP_08036135.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] gi|320147078|gb|EFW38637.1| ribosomal protein L25, Ctc-form [Treponema phagedenis F0421] Length = 211 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 2/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + LS R +GK +A R+ G++PA++Y PI +S D K + T Sbjct: 1 MGQRILSGRRRTGLGKAAAARCRREGRLPAVMYDRFGKSIPIDVSQYDFYKLFRNITEST 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I K+ V KDYQ + ++D + H DF +V G + + +R G++ Sbjct: 61 IITVKLDDKDEFEVFVKDYQHNIITDTVEHVDFYEVERGKVLRTKIQLRL--SGSPEGVR 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QG L ++ + C ++P+ I VD++ L + +++H+ DI++ + ++ ++ +A Sbjct: 119 QGAVLEAGLTDIEVECLPKDLPERIIVDVSKLDLNEALHVRDIKVQGEVKILTDPDLPVA 178 Query: 183 TI 184 T+ Sbjct: 179 TL 180 >gi|28476663|gb|AAO44751.1| 50S ribosomal protein L25 [Tropheryma whipplei str. Twist] Length = 208 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + A R GKG AR R G+IPA+ YG P+ + L A +S + N Sbjct: 21 SMVYPVVEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN-- 78 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L L I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ Sbjct: 79 -ALLQLKIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQS----- 132 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 G +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + I Sbjct: 133 YAGTVTSVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLI 192 Query: 182 ATIVA 186 A + Sbjct: 193 AKVDP 197 >gi|330836938|ref|YP_004411579.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] gi|329748841|gb|AEC02197.1| 50S ribosomal protein L25 [Spirochaeta coccoides DSM 17374] Length = 210 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 5/185 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M LSA +R G +R + ++G+IPA+IYG + P I + A++ + Sbjct: 1 MKDTSKTLSAELRTGDFGSSGSRRVVRSGKIPAVIYGKNT-PLHITIDAQEFRLKRRYFT 59 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 T++L++ + K+ + KD Q D +++ + H DF +V+ G T+ V + Sbjct: 60 -ETSLLSIVLSKKKHECLVKDVQEDLLNNRIKHVDFYEVTSGQTLHTRVNIELT--GNPV 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G + GG L + ++ + N+P+ I VD++ L + D + + D+ P +++ Sbjct: 117 GARDGGVLEHILFDIEIESLPANLPEVIRVDVSQLGLNDVLTVGDVVWPVGVKALADAET 176 Query: 180 TIATI 184 +AT+ Sbjct: 177 AVATV 181 >gi|149280711|ref|ZP_01886821.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] gi|149228535|gb|EDM33944.1| 50S ribosomal protein L25/general stress protein Ctc [Pedobacter sp. BAL39] Length = 192 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG A+ ++ +YS Sbjct: 1 MKTVAISGSTRENVGKRDAKELRYEGKVPAVLYGGKEQA-HFAVVTTELKDAIYSPEASF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL+ + I K+ Q P++D L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 60 VEITLNG--TKTNAIIKELQFHPLTDQLLHVDFLQLFDDKEILMEIPVKLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P ++ V + L++G+ + D+ + + + TI Sbjct: 116 MGGKLVQKLRKLRVRSFPKDMPQAVEVSIAKLEVGNLFRVRDLEKGNYVVTNTPED-TIV 174 Query: 183 TIVAPIS 189 ++ + Sbjct: 175 SVGMSRA 181 >gi|46199527|ref|YP_005194.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB27] gi|55981558|ref|YP_144855.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus thermophilus HB8] gi|62287407|sp|Q5SHZ1|RL25_THET8 RecName: Full=50S ribosomal protein L25; Short=TL5 gi|71153670|sp|Q72IA7|RL25_THET2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116668257|pdb|2J01|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668318|pdb|2J03|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|119389755|pdb|2HGJ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. gi|119389812|pdb|2HGQ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. gi|119389868|pdb|2HGU|Y Chain Y, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgr. gi|149240905|pdb|1VSA|T Chain T, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|157836540|pdb|2V47|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836596|pdb|2V49|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|160285447|pdb|1VSP|T Chain T, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156539|pdb|3D5B|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156593|pdb|3D5D|Z Chain Z, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938876|pdb|2JL6|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938934|pdb|2JL8|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit. gi|218766816|pdb|3F1F|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766872|pdb|3F1H|Z Chain Z, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887455|pdb|2WDI|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887487|pdb|2WDJ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887544|pdb|2WDL|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887601|pdb|2WDN|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823587|pdb|2WH2|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823646|pdb|2WH4|Z Chain Z, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100031|pdb|3HUX|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100087|pdb|3HUZ|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824545|pdb|2WRJ|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824607|pdb|2WRL|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824666|pdb|2WRO|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824725|pdb|2WRR|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307213|pdb|3KIR|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307271|pdb|3KIT|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307329|pdb|3KIW|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307387|pdb|3KIY|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965650|pdb|3KNI|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965682|pdb|3KNK|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965714|pdb|3KNM|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965746|pdb|3KNO|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979494|pdb|3I8F|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979578|pdb|3I8I|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979632|pdb|3I9C|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979686|pdb|3I9E|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982133|pdb|2X9S|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982192|pdb|2X9U|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|300508650|pdb|3MRZ|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508705|pdb|3MS1|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307568019|pdb|2XG0|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568077|pdb|2XG2|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|309320306|pdb|3OH5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320336|pdb|3OH7|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320408|pdb|3OHJ|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320438|pdb|3OHK|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320489|pdb|3OHZ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320540|pdb|3OI1|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320591|pdb|3OI3|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320642|pdb|3OI5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207731|pdb|2XQE|Z Chain Z, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754055|pdb|2XTG|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754113|pdb|2XUX|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533460|pdb|2Y0V|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533519|pdb|2Y0X|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533578|pdb|2Y0Z|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533637|pdb|2Y11|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533696|pdb|2Y13|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533755|pdb|2Y15|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533814|pdb|2Y17|Z Chain Z, Ef-Tu Complex 3 gi|325533873|pdb|2Y19|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|46197153|gb|AAS81567.1| LSU ribosomal protein L25P [Thermus thermophilus HB27] gi|55772971|dbj|BAD71412.1| 50S ribosomal protein L25 (TL5) [Thermus thermophilus HB8] Length = 206 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR+ G++P ++Y N + + + + K + I Sbjct: 2 EYRLKAYYREGEKPSA---LRRAGKLPGVMY-NRHLNRKVYVDLVEFDKVFRQASIHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + + LD H DF V V ++VP+RF+ G++ G Sbjct: 58 VLELPDGQSLPTLVRQVNLDKRRRRPEHVDFF-VLSDEPVEMYVPLRFVGTPA--GVRAG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 115 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 174 Query: 185 VAP 187 V P Sbjct: 175 VPP 177 >gi|197725521|gb|ACH72973.1| 5S rRNA-binding protein [Aquifex aeolicus] Length = 202 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + K+ + R K + R+ G +P IYG + K ++ KD + + + F Sbjct: 1 MRRVKVKLLPRKPGRKSDLKRKRREGWLPVEIYGKGVENKHAWINVKDFASLPHGEAF-- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ ++ E + KD Q + + IH D +S + V VP+ F+ G++ Sbjct: 59 -LIEAELDGETRVCLLKDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVGTPA--GVE 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG V H +++ P IP+ I VD++ L +G+++H+ DI PE + T+A Sbjct: 116 AGGTFEPVMHTLTIKAPPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDNPEETVA 175 Query: 183 TI 184 + Sbjct: 176 VV 177 >gi|284037806|ref|YP_003387736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] gi|283817099|gb|ADB38937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma linguale DSM 74] Length = 188 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K+ ++ R +G+ ++ +R G +P ++YG + A I R Sbjct: 1 MKKIEIVGYQRANLGRTESQAIRAEGNVPCVLYGGEEQ---VHFYAPAILFRDLIYTPNI 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+I I ++ Q PVSD+L+HADFL V++ + + VPVR + +PG++ Sbjct: 58 FEVALNIEGAEYRAILQEAQFHPVSDVLLHADFLLVTDKKPIKIAVPVRLV--GTAPGVQ 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GGKL ++ + NIPD I VD+ L +G S+ + I + + + + + +A Sbjct: 116 KGGKLVTRVRKLRVKGTVENIPDFIDVDVTGLDLGKSVRVGQIPV-KNIEMLEEASNPVA 174 Query: 183 TIVAPIS 189 +I P + Sbjct: 175 SIEIPRA 181 >gi|84683373|ref|ZP_01011276.1| Ribosomal protein L25 [Maritimibacter alkaliphilus HTCC2654] gi|84668116|gb|EAQ14583.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2654] Length = 180 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIH 92 +YG DP PI ++ + K+L F++T+ L + G++ V VI ++ Q D V D+ H Sbjct: 1 MYGGDVDPLPININFNMLLKKLKDGRFLSTLFNLKVEGQDDVRVICRNVQRDVVKDLPTH 60 Query: 93 ADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DFL++ S + + +PV FINE K+PG+K+GG + V EV L A +IP+ I VDL Sbjct: 61 VDFLRLRRTSRINLFIPVEFINEEKAPGVKKGGVVVHVRPEVELDVVAGDIPEKIVVDLA 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPIS 189 IGD IH+ D+ LP+ + + IA I AP Sbjct: 121 GRDIGDVIHISDVELPQGAKPTVERDFVIANISAPSG 157 >gi|225621394|ref|YP_002722653.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] gi|225216215|gb|ACN84949.1| 50S ribosomal protein L25/general stress protein Ctc [Brachyspira hyodysenteriae WA1] Length = 196 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 3/185 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K R LR G A +YG + IA+ K+ K Sbjct: 1 MS-ENYTIKALQRDTKFKSVGRKLRNEGYALATLYG-RENQYSIAVELKEFVKVFSLAGQ 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I + V+ KDYQ+D + I+ H DF ++ + +VP+ + Sbjct: 59 HDIITLDIQNDKTREVLVKDYQIDGIKRIIRHIDFYEIDRNKKIKTYVPIHIEGTPEGVR 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + G L V + +++ +IP + VD+++LK+GDS+H+ DI+ PE + + Sbjct: 119 LGGGT-LEQVEYGLNIKAFPGSIPRELVVDVSELKVGDSLHISDIKFPEGVDPVGDASKA 177 Query: 181 IATIV 185 I T+V Sbjct: 178 IVTVV 182 >gi|188575471|ref|YP_001912400.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519923|gb|ACD57868.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 179 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 6/155 (3%) Query: 34 IYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHA 93 +YG +P I L+ + I ++ F ++IL L++ ++ V+ +D Q P +++H Sbjct: 1 MYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGDVQQVLLRDIQRHPFKQLIMHI 60 Query: 94 DFLQVSEGSTVTVHVPVRFINENKSP-GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLN 152 DF +VS ++ VP+ FINE SP G + +EV ++C ++P+ I VDL Sbjct: 61 DFQRVSANQKLSAAVPLHFINEEASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLG 120 Query: 153 DLKIGDSIHMEDIRLPEKTSSMS-----QLNITIA 182 L++G+ IH+ +I+LP + ++ + Sbjct: 121 ALEVGNVIHLSEIKLPAGVEIPELKLGKERDVAVV 155 >gi|46447228|ref|YP_008593.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Protochlamydia amoebophila UWE25] gi|71153157|sp|Q6MAT1|RL25_PARUW RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|46400869|emb|CAF24318.1| putative general stress protein ctc [Candidatus Protochlamydia amoebophila UWE25] Length = 184 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL- 67 A++R K LR+ G IPA++Y + + +A+++ + + L T+ Sbjct: 2 KAILRTGKSKSEINRLRREGMIPAVLYVRGKEGETLAINSAEFNSYLRHVKSGHLPTTIF 61 Query: 68 ---DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 D V+ KD Q + ++H DF ++ + + V VP+ G+K G Sbjct: 62 TLVDEKGSERRVLVKDIQYAITTYQVMHLDFEELIDDHKINVKVPIECTGTVDCVGVKLG 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V + C ++P +D+ +L + S ++D+ +PE + +N +A I Sbjct: 122 GVLRQVIRHARIRCLPKDMPSFFELDVQELGLKQSKRLKDMNIPETVRPLIDMNEVVAVI 181 Query: 185 V 185 V Sbjct: 182 V 182 >gi|330995949|ref|ZP_08319844.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] gi|329574288|gb|EGG55863.1| ribosomal protein L25, Ctc-form [Paraprevotella xylaniphila YIT 11841] Length = 197 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 87/192 (45%), Gaps = 7/192 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 KE + +R GK +AR +R+ +P +YG D P +A + + R Sbjct: 1 MKEINVKGTVRTVFGKKAARDIRRANAVPCNLYGEAKDENGAPVALAFTTTNDELRNLIY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L+I + + K+ Q PV D ++H DF +++E + + VP++ + Sbjct: 61 SPDIYVVNLNIDGKEYKAVLKELQFHPVKDNVLHVDFYEITETKPIIMEVPIKL--NGLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG+L ++ + IP+ + +D+ L +G +I + ++ + ++ Sbjct: 119 EGVKAGGRLAASVRKLKVKSVYTQIPERLNIDVTSLGLGKTIKVGELHF-DGLELVTSKE 177 Query: 179 ITIATIVAPISG 190 + + + S Sbjct: 178 VVVCQVKMTRSA 189 >gi|212691832|ref|ZP_03299960.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|237708038|ref|ZP_04538519.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|237724811|ref|ZP_04555292.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D4] gi|265756187|ref|ZP_06090516.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] gi|212665588|gb|EEB26160.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855] gi|229437006|gb|EEO47083.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides dorei 5_1_36/D4] gi|229457866|gb|EEO63587.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA] gi|263233778|gb|EEZ19387.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA] Length = 198 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 K ++ +R VGK + LRKN +P ++YG D P S R Sbjct: 1 MKSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ + Sbjct: 61 TPHIYVVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQLE--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GGKL + ++ + N IP+ + VD+ L +G +I + ++ E ++ Sbjct: 119 EGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTIKVGELSY-EGLELINAKE 177 Query: 179 ITIATI 184 + + Sbjct: 178 AVVCAV 183 >gi|251794072|ref|YP_003008803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] gi|247541698|gb|ACS98716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus sp. JDR-2] Length = 217 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Query: 10 AVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLD 68 A R K R LR++G++P I+YG + P +A+ K++ L + L + Sbjct: 7 AEQRTTTMKSELRSLRESGRVPGIVYGKQLASPASVAIQEKELLALLRTHPNAVIDLDIP 66 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 G V+ + Q + +S LIH DF Q++ VT HV + + S G ++GG + Sbjct: 67 -GAGKQSVMIAEIQREKLSRKLIHVDFQQINMNEEVTTHVRIDLV--GDSQGEREGGIVQ 123 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + HE+ + C +IPDSI VD+ L +G S + D++ P + ++ + + T++ P Sbjct: 124 ALLHELEVRCLPGSIPDSIPVDVTGLLMGSSYLVGDVQAPAGVTIVTDPSAVLVTVLVP 182 >gi|154249290|ref|YP_001410115.1| 50S ribosomal protein L25/general stress protein Ctc [Fervidobacterium nodosum Rt17-B1] gi|189042356|sp|A7HKM5|RL25_FERNB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|154153226|gb|ABS60458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fervidobacterium nodosum Rt17-B1] Length = 219 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 9/192 (4%) Query: 5 ECKLSAVMRDKVG-KGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMT 62 E +SA +R VG K + R LR G IPA+ YG + P + L+ D K T Sbjct: 2 EHVVSAQLRSIVGNKRAVRRLRATGAIPAVAYGPGLEKPLSLVLNKTDFLKIFKHITEST 61 Query: 63 TILTL-----DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + D K Q D V+D + H DF + ++VP+ + K Sbjct: 62 PLTLVVKDENDKEVLKHLAFIKMVQYDKVTDEVKHVDFYVPEAHHKMRINVPIEIV--GK 119 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+++GG + ++ HEV + + +P+ I +D+ +L++G+++ ++D+ LPE Sbjct: 120 AIGVEKGGIMEIIHHEVPVKALPDRVPEVIKIDVTNLELGETLRVKDVVLPEGVEIDMDD 179 Query: 178 NITIATIVAPIS 189 + T+V P Sbjct: 180 EDVLITVVVPRG 191 >gi|224510801|pdb|3FIN|Z Chain Z, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 50s Subunit Length = 177 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R+ + LR+ G++P ++Y N + + + + K + I+ Sbjct: 1 YRLKAYYREGEKPSA---LRRAGKLPGVMY-NRHLNRKVYVDLVEFDKVFRQASIHHVIV 56 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + + LD H DF V V ++VP+RF+ G++ GG Sbjct: 57 LELPDGQSLPTLVRQVNLDKRRRRPEHVDFF-VLSDEPVEMYVPLRFVGTPA--GVRAGG 113 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA +V Sbjct: 114 VLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 173 Query: 186 AP 187 P Sbjct: 174 PP 175 >gi|322812593|pdb|3PYO|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812646|pdb|3PYR|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|322812699|pdb|3PYT|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812752|pdb|3PYV|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome Length = 188 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 7/182 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R+ + LR+ G++P ++Y N + + + + K + I+ Sbjct: 1 YRLKAYYREGEKPSA---LRRAGKLPGVMY-NRHLNRKVYVDLVEFDKVFRQASIHHVIV 56 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + + LD H DF V V ++VP+RF+ G++ GG Sbjct: 57 LELPDGQSLPTLVRQVNLDKRRRRPEHVDFF-VLSDEPVEMYVPLRFVGTPA--GVRAGG 113 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA +V Sbjct: 114 VLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 173 Query: 186 AP 187 P Sbjct: 174 PP 175 >gi|219684926|ref|ZP_03539867.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] gi|219671664|gb|EED28720.1| ribosomal protein L25, Ctc-form [Borrelia garinii PBr] Length = 176 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG ++ + + + + +K+ T+L L Sbjct: 1 LSCKYRTSFGSSNARRIRSKDEIPAVVYGQGNNVSHLKIKSSEFNKKFAKFT-DNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 60 DDGKLERCVFVKDVAENVARKLIYHIDFYEVDRRVELEKYVPIKLI--GASVGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 V+ +V + ++P+ I +DL + GDS+ ++D+ LP + N+ + TI Sbjct: 118 TVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSVFLKDLVLPSNVKLAENDENLEVVTI 175 >gi|239907580|ref|YP_002954321.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] gi|259646684|sp|C4XHR1|RL25_DESMR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|239797446|dbj|BAH76435.1| 50S ribosomal protein L25 [Desulfovibrio magneticus RS-1] Length = 192 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M Q + L+ R +GKG+ R LR + +P + Y P+ + + K Sbjct: 1 MSQTQ-SLAVKTRAGLGKGACRKLRADDMVPGVYYDAKGVNVPVMVEHLPLQKLYSKIAS 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L I E + + P + H DF V + V VPV + ++K Sbjct: 60 SHV-FDLQIEGETKPALVWKVEHHPTKPRITHVDFYGVDLTKEIQVRVPVEVVGKSKGQV 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++ EV LC IPD I +D+ ++ I +SI + D+ LPE ++ N Sbjct: 119 KGGQLEIHREFIEV--LCLPLVIPDKIVLDITNVDINESILIADVVLPEGVKAVYDNNYA 176 Query: 181 IATIV 185 + ++ Sbjct: 177 VIGVL 181 >gi|332711867|ref|ZP_08431797.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] gi|332349195|gb|EGJ28805.1| LSU ribosomal protein L25P [Lyngbya majuscula 3L] Length = 183 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 7/184 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K R LR++G IP ++YG+ ++ + ++AK L + + T Sbjct: 2 NVTVECQKRPEGSK--PRALRRSGLIPTVLYGHNGAESVSLTMTAKAAEDLLKTASVNNT 59 Query: 64 ILTLDIGKELV--HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L I V+ ++ Q P + L H F V+ + V V VP++ + ++ G+ Sbjct: 60 LIELSIPDISWNGPVLLREIQSHPWKNSLYHLSFFSVASQNKVEVVVPLKLV--GEAVGV 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 KQGG L V + CP + IP++I +D+++L+ G +++ ++ LPE M + +++ Sbjct: 118 KQGGILQQRLTTVKVQCPPDKIPETIDIDISNLEQGKMLYIYELVLPEGIEVMDEPKLSV 177 Query: 182 ATIV 185 I Sbjct: 178 LAIT 181 >gi|110597921|ref|ZP_01386203.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] gi|110340498|gb|EAT58984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium ferrooxidans DSM 13031] Length = 199 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRKNG +PA+IY + P++++ + K ++S Sbjct: 1 METIVLGVEPR-VIKKKDAEKLRKNGIVPAVIYHKGEETIPVSVNEIALKKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L G+ K Q PV+D +IH DF + + + VPV S G++ Sbjct: 60 IDLQFPDGRIK-RSFIKQVQFHPVTDRIIHTDFQLFAADEVIELEVPVSVT--GDSIGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 +GG+L ++ H +++ ++PD + VD+ L+IG SIH+ +I + + Sbjct: 117 KGGRLQIIRHALTIKGKPEDMPDHLIVDVTALEIGHSIHVREIPMTAYAGLVISDDPDTP 176 Query: 181 IATIVAPI 188 + T++A Sbjct: 177 VITVLASK 184 >gi|189501903|ref|YP_001957620.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus Amoebophilus asiaticus 5a2] gi|226736276|sp|B3ERN9|RL25_AMOA5 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189497344|gb|ACE05891.1| hypothetical protein Aasi_0482 [Candidatus Amoebophilus asiaticus 5a2] Length = 196 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K ++ R +GK +++ LR + Q+P ++YG + + Sbjct: 1 MKTIEIIGYRRANLGKQASKQLRNDAQVPGVLYGGKEQ---VHFYTPMAILKDLVYTPQA 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +TL++ + + I +D Q PV+++++H D LQ+ E + + +P+ + +PG+ Sbjct: 58 YFVTLNLEGAIYNCILQDIQFHPVNEVILHIDLLQIFEDKQIKMDIPIVLV--GDAPGVV 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG L ++S++ ++PD+I VD++ L +G + I+ E + ++ +A Sbjct: 116 KGGNLVHKKKKLSVVAYPKDMPDTIPVDISGLDVGQMTRVSHIK-AENYTILAVPGTPVA 174 Query: 183 TIVAPIS 189 + + Sbjct: 175 VVETTRA 181 >gi|150006312|ref|YP_001301056.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides vulgatus ATCC 8482] gi|254885161|ref|ZP_05257871.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294776297|ref|ZP_06741781.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|319641348|ref|ZP_07996043.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] gi|166223663|sp|A6L6X0|RL25_BACV8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149934736|gb|ABR41434.1| putative 50S ribosomal protein L25 [Bacteroides vulgatus ATCC 8482] gi|254837954|gb|EET18263.1| general stress protein CTC [Bacteroides sp. 4_3_47FAA] gi|294449884|gb|EFG18400.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510] gi|317387029|gb|EFV67913.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A] Length = 198 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 K ++ +R VGK + LRKN +P ++YG D P S R Sbjct: 1 MKSIEIKGTVRTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L+I ++V+ I KD Q PV+D ++H DF Q+ E + + VPV+ + Sbjct: 61 TPHIYVVDLNIDGKIVNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQLE--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GGKL + ++ + N IP+ + VD+ L +G ++ + ++ E ++ Sbjct: 119 EGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTVKVGELSY-EGLELINAKE 177 Query: 179 ITIATI 184 + + Sbjct: 178 AVVCAV 183 >gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconacetobacter hansenii ATCC 23769] Length = 206 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 2/165 (1%) Query: 25 RKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDI-GKELVHVIPKDYQL 83 R+ G +P +IYG + IAL + +++ L+ + + I + I G + H + ++ QL Sbjct: 24 RRAGLVPGVIYGGKQEAVLIALDPRIVARELHKPGWRSRIYDISIDGSKTEHALLREIQL 83 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PVSD+ +H D+ +++EG V V V + F E SPGIK+GG LN+V H V ++ N+ Sbjct: 84 HPVSDVPLHVDYQRLAEGQKVHVEVSITFTGEEVSPGIKRGGVLNIVRHTVDVVADPANM 143 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ-LNITIATIVAP 187 P+ + DL+ L I D++ ED++ E + + N IATI AP Sbjct: 144 PEGFSADLSKLDIHDNVRWEDLKGTEHVTPVQHIPNFVIATIAAP 188 >gi|160879949|ref|YP_001558917.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] gi|189042350|sp|A9KSE6|RL25_CLOPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|160428615|gb|ABX42178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium phytofermentans ISDg] Length = 193 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 2/183 (1%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 Q+ L+ V R KG+ +LLR NG +P I+G + IA+ + K + Sbjct: 1 MQETALLNMVPRTSTSKGANKLLRNNGYLPGNIFGKGMESISIAVKKDEFKKSIKEYGRN 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +D + V+ K+ + P+ + + H +F VS + V + I Sbjct: 61 AVFKLVDTNNKEYTVMTKEITVAPLINEISHLNFQLVSLSEAIKQEVAFKIIGTEFLESK 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + +V V + ++IP + +D++ + GDS+ +DI+LPE +S + I Sbjct: 121 RLLLNSHV--DSVPVSGLPHDIPHELEIDVSSMNSGDSLLFKDIKLPEGITSDVDPELKI 178 Query: 182 ATI 184 T+ Sbjct: 179 ITV 181 >gi|313886398|ref|ZP_07820120.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332299899|ref|YP_004441820.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] gi|312924144|gb|EFR34931.1| ribosomal protein L25, Ctc-form [Porphyromonas asaccharolytica PR426713P-I] gi|332176962|gb|AEE12652.1| 50S ribosomal protein L25 [Porphyromonas asaccharolytica DSM 20707] Length = 211 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 8/190 (4%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 K KLSA +R D++GK + + LR G +P ++YG S+ + + + A DI+K +Y+ + Sbjct: 1 MKHFKLSATVRKADQLGKKATKGLRSEGLVPVVLYG-GSETQHLIVKADDINKLIYTPDI 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ LDI + V + K+ Q PVSD +HAD +VSE + + VPV + + G Sbjct: 60 Y--LIELDIEGKQVKAVLKEVQFHPVSDKTLHADLYEVSEDKPIVMSVPVVL--DGHAVG 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 ++ GGKL + + + IP+++ +D+ +LK+G +I + ++ E + Sbjct: 116 VRAGGKLVREKRNLRVRAIYDKIPETLVIDVTNLKLGKTIQVHELSF-EGLELVDAPQAV 174 Query: 181 IATIVAPISG 190 + + + Sbjct: 175 VCAVKQTRAA 184 >gi|299820654|ref|ZP_07052543.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] gi|299817675|gb|EFI84910.1| 50S ribosomal protein L25 [Listeria grayi DSM 20601] Length = 213 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ + +R++G+IPAI+YG S+ P+++ D+ K + +N + Sbjct: 9 IVLDIKKRETKPHSNITEVRESGRIPAIVYGYQSENVPVSVDELDLLKLVR-ENGRNAVF 67 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 T+++ + V+V+ DYQ+DP+ + L+H D L V + V V + + +S G+K+GG Sbjct: 68 TVNLDGKKVNVLLHDYQIDPLKNKLVHVDLLAVDMKAEVEAEVRIDLV--GESTGVKEGG 125 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L V HEV++ + +P+S+ VD+++L IGDS+ + I + ++ IAT+ Sbjct: 126 VLQQVLHEVTVSATPDKLPESVEVDISELGIGDSVEVSKISTSKAFEIITDGEEVIATVT 185 Query: 186 API 188 AP Sbjct: 186 APR 188 >gi|255530495|ref|YP_003090867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] gi|255343479|gb|ACU02805.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pedobacter heparinus DSM 2366] Length = 192 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 93/187 (49%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +S R+ VGK A+ LR G++PA++YG A+ D+ +Y+ Sbjct: 1 MKTIAISGSPRENVGKRDAKELRYEGKVPAVLYGGKEQ-VHFAVVIADLRDAIYTPEANF 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++ K I K+ Q P++D+L+H DFLQ+ + + + +PV+ SPG+K Sbjct: 60 VEIAINGNKIK--AIIKELQFHPLTDVLLHVDFLQLFDDKEILMEIPVKLT--GTSPGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL ++ + ++P ++ V + L++G+ + D+ + T + + + TI Sbjct: 116 MGGKLVQKLRKLRVKAFPKDMPQAVEVSIAKLEVGNLFRVRDLEKGKYTVTNTGED-TIV 174 Query: 183 TIVAPIS 189 ++ + Sbjct: 175 SVGMSRA 181 >gi|254796686|ref|YP_003081522.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] gi|254589925|gb|ACT69287.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str. Illinois] Length = 194 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 3/181 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + + R +G SA +LR++G +PA++YG + +A+S +D+SK + + ++ Sbjct: 3 VSIECIPRTSLGGNSADVLRRSGFVPAVVYGKERENMNVAISVRDVSKHFAVLSG-SGVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L ++ V+PK Y+L PVS +++H DF+ + + VP+ F+N KS I+ G Sbjct: 62 ELSCEGKVYKVVPKAYELHPVSSVVLHLDFV-FAGEHSSKFQVPLNFVNSGKSEAIRLGA 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATI 184 LN+V V + C A N+P SI VD+ + K+GDSI D+ P+ ++ N +AT+ Sbjct: 121 MLNIVKRTVLVRCAAANLPKSIPVDIENAKVGDSIKFSDLVFPDGVVPLARDANSVVATV 180 Query: 185 V 185 V Sbjct: 181 V 181 >gi|189485712|ref|YP_001956653.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226694582|sp|B1GYU9|RL25_UNCTG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|170287671|dbj|BAG14192.1| 50S ribosomal protein L25 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 239 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 2/184 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 KE L A R KG LRK+G+IPAI YG P+ IA+S+K + N Sbjct: 1 MKEVILDAQARTVGSKGDLAFLRKSGKIPAIFYGKGIKPEAIAVSSKVFVSIME-ANGAN 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L+ I K D ++ IH DF +S + V VPV Sbjct: 60 VIINLNFKDGKKAAIVKSLDRDFLTQHTIHIDFHAISLEDKIEVLVPVHIAGVADGV-KN 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG + + EV + NIP I+VD+ L+IG I + D+ + + + I Sbjct: 119 FGGVMEFIVREVKVEAIPRNIPQKISVDVKALRIGQGITVADLPELDGVKYVQDSSTLIV 178 Query: 183 TIVA 186 ++A Sbjct: 179 HVIA 182 >gi|293573041|ref|ZP_06683983.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] gi|291606943|gb|EFF36323.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E980] Length = 202 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|296125818|ref|YP_003633070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] gi|296017634|gb|ADG70871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brachyspira murdochii DSM 12563] Length = 196 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K R LR G A +YG + IA+ K+ K S Sbjct: 1 MS-ENYTIKALQRDTKFKSVGRKLRNEGYALATLYG-RENQYSIAVELKEFVKVF-SLAG 57 Query: 61 MTTILTLDIGKEL-VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 I+TLDI + V+ KDYQ+D + + H DF ++ + +VP+ + Sbjct: 58 QHDIITLDIENDKAREVLVKDYQIDGIKRSIRHIDFYEIDRNKKIKTYVPIHIEGIPEGV 117 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 + G L V + + + +IP + VD+++LK+GDS+H+ DI+ PE + + Sbjct: 118 RLGGGT-LEQVEYGLPIKAFPGSIPRELIVDVSELKVGDSLHISDIKFPEGVDPVGDGSK 176 Query: 180 TIATIV 185 + T+V Sbjct: 177 AVVTVV 182 >gi|298372822|ref|ZP_06982812.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] gi|298275726|gb|EFI17277.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str. F0058] Length = 221 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 24/209 (11%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K +L R ++GK + + LR G IPA++YG+ S P + +D + ++ Sbjct: 1 MKTFQLEGKPRKEIGKKAVKALRGEGLIPAVLYGHRSVELPYSGKLEDGQVLVENQGKGV 60 Query: 63 TI---------------------LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 + + L+IG + KD QL PV+D ++H DFL V Sbjct: 61 VVTNFTVTTDAVRKLIYSPEVFIVELNIGGHKQTAMLKDLQLHPVTDEILHIDFLAVFPD 120 Query: 102 STVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 +T+ VPV G++ GGKLN++ ++ + + +IP+ + +++ +L++G +I Sbjct: 121 IPMTIEVPVVLDGFAA--GVRAGGKLNLISKKLKVKGLSKDIPEKLHINVENLELGKAIQ 178 Query: 162 MEDIRLPEKTSSMSQLNITIATIVAPISG 190 ++ + + + ++ + + + Sbjct: 179 IKHLNF-DNLTLLNAPDNVVCVVAVTRGA 206 >gi|154509584|ref|ZP_02045226.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] gi|153799218|gb|EDN81638.1| hypothetical protein ACTODO_02116 [Actinomyces odontolyticus ATCC 17982] Length = 202 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ + Sbjct: 1 MSDNPILL-AEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLFLIVR--GT 57 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L I + + KD Q+ PV ++HADFL V G V V VPV + E+ Sbjct: 58 KNALVELKIEGKTQLALVKDVQVHPVRRDILHADFLAVKAGEKVDVEVPVVVVGESAPGT 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + + PA +IP+S+ V + ++ G ++H+ D++LP Sbjct: 118 VHSVEEF-----TILVKAPATSIPESLEVSIEGVEAGSAVHVSDLKLPAGVEVELDPETV 172 Query: 181 IATIV 185 I + Sbjct: 173 IVAVQ 177 >gi|15639363|ref|NP_218812.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum str. Nichols] gi|189025605|ref|YP_001933377.1| 50S ribosomal protein L25/general stress protein Ctc [Treponema pallidum subsp. pallidum SS14] gi|68052994|sp|O83387|RL25_TREPA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226694581|sp|B2S2W9|RL25_TREPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3322650|gb|AAC65357.1| general stress protein (ctc) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018180|gb|ACD70798.1| general stress protein [Treponema pallidum subsp. pallidum SS14] gi|291059763|gb|ADD72498.1| ribosomal protein L25, Ctc-form [Treponema pallidum subsp. pallidum str. Chicago] Length = 196 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L R ++GK +A RK G++PA++Y + P+ L+ +D + + T Sbjct: 1 MDERRLKGKRRVQLGKYAAVRGRKEGRLPAVMYDHRGVSVPLELAQQDFDRLFRALTRST 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + G E+ V KDYQ + VSD + H DF V E + + + R G++ Sbjct: 61 VLSLELDGGEVFCVFVKDYQHNMVSDRVEHVDFYAVEESVPLRMRI--RLQLCGSPEGVR 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G +L + + N+PD + +D++ L GD + D+ LP +S + I Sbjct: 119 YGARLEKGLSYIEVESLPRNLPDRVVLDISGLGAGDVRRVRDVPLPASVVVLSDPDAVIV 178 Query: 183 TI--VAPISGS 191 + A +GS Sbjct: 179 ALSSSASEAGS 189 >gi|294673023|ref|YP_003573639.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] gi|294474355|gb|ADE83744.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella ruminicola 23] Length = 198 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG--NMSDPKPIALSAKDISKRLYS--K 58 KE +S R GK +++ +RK G +P +YG + P++LS + +L Sbjct: 1 MKEISVSGQKRATTGKKASKEMRKEGLVPCNMYGEAKGENGLPVSLSFAIPASQLRRVVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ L I E + K+ Q P +D L+H DF +V+E +T+ +PV+ + + Sbjct: 61 SPDVYVVNLTIDGEAHKAVMKELQFHPTTDALLHVDFYEVNEEKPITIGIPVKLVGH--A 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G++ GG+L+ +++ P IP+ + VD+ +LK+G +I + ++ + + Sbjct: 119 QGVRDGGRLSQAVRTLNVTAPYKQIPEVLNVDVTELKLGKAIKVAELNF-DGLQIATPAQ 177 Query: 179 ITIATI 184 + + ++ Sbjct: 178 VVVCSV 183 >gi|253681263|ref|ZP_04862061.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253562501|gb|EES91952.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 192 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ R+K LR+NGQ+P I+YG ++ PI ++ + + L + N Sbjct: 1 MSQVAIAINEREKTDTNG--RLRRNGQVPCIMYGEHLEKAVPIKVNYNQLMRILKN-NSK 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +IL L + E+ + + K+ Q D V+ +IH DF VS+ + + +P+ F NK Sbjct: 58 GSILKLQLNNEIKNCVIKEIQQDIVTGKVIHVDFQNVSKDEIIKMTIPIEFTGINKLQSK 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + E+ + IP++I +D + L G+ + + DI+LPE +S N + Sbjct: 118 RLILETFIT--EIDMQGKVQEIPEAIKIDASKLDFGNKLFVHDIKLPEGIRLLSDPNALV 175 Query: 182 ATI 184 A + Sbjct: 176 AVV 178 >gi|227550850|ref|ZP_03980899.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257887897|ref|ZP_05667550.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257893303|ref|ZP_05672956.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257896485|ref|ZP_05676138.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|293379263|ref|ZP_06625409.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] gi|227179948|gb|EEI60920.1| ribosomal protein L25 [Enterococcus faecium TX1330] gi|257823951|gb|EEV50883.1| ribosomal protein L25 [Enterococcus faecium 1,141,733] gi|257829682|gb|EEV56289.1| ribosomal protein L25 [Enterococcus faecium 1,231,408] gi|257833050|gb|EEV59471.1| ribosomal protein L25 [Enterococcus faecium Com12] gi|292642059|gb|EFF60223.1| ribosomal protein L25, Ctc-form [Enterococcus faecium PC4.1] Length = 202 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESIGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|168186990|ref|ZP_02621625.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169295085|gb|EDS77218.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 194 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ R+K A +R+NGQ+P I+YG ++ PI ++ ++ K L KN Sbjct: 1 MSQAAIAINEREKTDT--ANKIRRNGQVPCIMYGEHLEKAIPIKVNYNELMKLLR-KNSK 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +IL L++ E+ + + K+ Q D +S +IH DF V++ + + +P+ F+ + Sbjct: 58 GSILKLELNNEIRNCVIKEIQNDTLSGKIIHVDFQNVNKNEVIKMTIPIDFVGIDNLQLR 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K + + E+ + IP++I +D + + D I + DI+LPE +S+ + + Sbjct: 118 KLILETFIT--EIEMQGKVEEIPENIVIDASTMNCDDKIFVRDIKLPEGIRLLSEPDALV 175 Query: 182 ATI 184 A + Sbjct: 176 AVV 178 >gi|257899451|ref|ZP_05679104.1| ribosomal protein L25 [Enterococcus faecium Com15] gi|257837363|gb|EEV62437.1| ribosomal protein L25 [Enterococcus faecium Com15] Length = 202 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ + Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKIESTPISFDGLTLSKLLR-EHGANKV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G+K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGVKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|68053203|sp|Q83FQ8|RL25_TROWT RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 187 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R GKG AR R G+IPA+ YG P+ + L A +S + N Sbjct: 1 MVYPVVEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ Sbjct: 58 ALLQLKIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQS-----Y 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA Sbjct: 113 AGTVTSVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIA 172 Query: 183 TIVA 186 + Sbjct: 173 KVDP 176 >gi|300871526|ref|YP_003786399.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] gi|300689227|gb|ADK31898.1| 50S ribosomal protein L25 [Brachyspira pilosicoli 95/1000] Length = 198 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 3/185 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + + A+ RD K L +G A +YG + IA+ K+ K Sbjct: 1 MS-ENYTIKALQRDTTKKSVGHKLINDGYALATLYGRGKE-YAIAVELKEFVKIFSLAGQ 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I + V+ KDYQLD + + H DF ++ + VP+R + Sbjct: 59 HDIITLDIQNDQKREVLVKDYQLDGIKRTIRHIDFYEIDRNKKIKTFVPIRIEGIPEGVR 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + G L V +E+ + +IP ITVD+ +LK+G S+H+ DI+ PE + + Sbjct: 119 LGGGT-LEQVEYELPIKAFPGSIPREITVDVTELKVGSSLHISDIKFPEGVDPVGDGSKA 177 Query: 181 IATIV 185 + T+V Sbjct: 178 VVTVV 182 >gi|311898015|dbj|BAJ30423.1| putative ribosomal protein L25 [Kitasatospora setae KM-6054] Length = 200 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E +L+A R + GKG+AR R+ G +P ++YG+ P + L D+ L + N Sbjct: 1 MSEIRLAAESRTEFGKGAARRARRAGFVPGVVYGHGHAPVHLNLPGHDLMMALKTPN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L + I + V+PK Q + + + H D L V G VTV +PV E G Sbjct: 58 ALLVVPIEGKDEFVLPKAVQREAIKRTIEHVDLLLVKRGEKVTVEIPVHTEGELAPGG-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + V + + + A ++P+S+TV + L+ G +I DI LP S + + + Sbjct: 116 --NLIENVLNALPIEAEATHLPESVTVSVEGLEAGAAITAGDIALPSGVSLAVEADAVVL 173 Query: 183 TIV 185 ++ Sbjct: 174 QVI 176 >gi|51246585|ref|YP_066469.1| 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] gi|71153141|sp|Q6AJL8|RL25_DESPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|50877622|emb|CAG37462.1| related to 50S ribosomal protein L25 [Desulfotalea psychrophila LSv54] Length = 183 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +++A +R+ GKG R LR+ G PA++YG P+ + AK + +L + + Sbjct: 1 MFQVEMTASVREAFGKGPMRRLRQQGITPAVVYGAGKAALPLQMDAKILMTQLLEFSRVN 60 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+++L + G++ +V+ + Q DPV+D L+H DF ++ VPV F K G+ Sbjct: 61 TVVSLSVDGQDAKNVVIAEIQSDPVTDALVHVDFCEIDLDQAREFTVPVTFEGTPK--GV 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 GG+L V L +IP+ +++ DL I + + + D+ L E ++ + Sbjct: 119 DLGGRLESHLTSVILKAKPLDIPNEFVINIADLAIDEQLTVADVALAENVVMVTPAARVM 178 Query: 182 ATIV 185 ++ Sbjct: 179 VAVL 182 >gi|212703171|ref|ZP_03311299.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] gi|212673437|gb|EEB33920.1| hypothetical protein DESPIG_01212 [Desulfovibrio piger ATCC 29098] Length = 196 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIA---LSAKDISKRLYS 57 M ++ LS R+ GKG A R IP + Y D + L + + + Sbjct: 1 MTIEK-TLSVQKREGSGKGPAGRARTQDMIPGVFYTAKGDNIAVQAPALPLEKMYTEMGR 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + K + V+ + Q P H DF V V V VP+ F+ Sbjct: 60 TAVFNLEIDDNGTKTVHPVMFWEVQKHPYKKAFTHVDFYGVDLDKEVKVDVPIEFV--GV 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GG + V L ++P +T+++ D+ I DS+ +E + LPE ++ Sbjct: 118 ARGVKLGGVMETYRESVRLCSKPLDMPKKVTINVTDMGINDSVTVETLTLPENVKAVFDK 177 Query: 178 NITIATI 184 N I ++ Sbjct: 178 NFAIVSV 184 >gi|161486568|ref|NP_787782.2| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei str. Twist] Length = 186 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 8/179 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 + A R GKG AR R G+IPA+ YG P+ + L A +S + N +L L Sbjct: 5 VEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN---ALLQL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ G Sbjct: 62 KIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQS-----YAGTVT 116 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA + Sbjct: 117 SVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIAKVDP 175 >gi|257881467|ref|ZP_05661120.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257885739|ref|ZP_05665392.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260558395|ref|ZP_05830591.1| ribosomal protein L25 [Enterococcus faecium C68] gi|261207102|ref|ZP_05921791.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289565896|ref|ZP_06446336.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|293556880|ref|ZP_06675441.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|294616087|ref|ZP_06695898.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|294619422|ref|ZP_06698877.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|294621228|ref|ZP_06700413.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|314938857|ref|ZP_07846128.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] gi|314943662|ref|ZP_07850416.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|314952190|ref|ZP_07855208.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|314994548|ref|ZP_07859814.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|314996547|ref|ZP_07861584.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|257817125|gb|EEV44453.1| ribosomal protein L25 [Enterococcus faecium 1,231,502] gi|257821595|gb|EEV48725.1| ribosomal protein L25 [Enterococcus faecium 1,231,501] gi|260075569|gb|EEW63875.1| ribosomal protein L25 [Enterococcus faecium C68] gi|260078730|gb|EEW66432.1| ribosomal protein L25 [Enterococcus faecium TC 6] gi|289162269|gb|EFD10129.1| 50S ribosomal protein L25, Ctc-form [Enterococcus faecium D344SRF] gi|291591050|gb|EFF22748.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1636] gi|291594334|gb|EFF25756.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1679] gi|291599224|gb|EFF30256.1| ribosomal protein L25, Ctc-form [Enterococcus faecium U0317] gi|291600964|gb|EFF31255.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1039] gi|313589288|gb|EFR68133.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a01] gi|313591070|gb|EFR69915.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133B] gi|313595722|gb|EFR74567.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133A] gi|313597699|gb|EFR76544.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133C] gi|313641868|gb|EFS06448.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0133a04] Length = 202 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|69249937|ref|ZP_00605063.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257878830|ref|ZP_05658483.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257890689|ref|ZP_05670342.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|258615099|ref|ZP_05712869.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecium DO] gi|293563627|ref|ZP_06678071.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|314949097|ref|ZP_07852457.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] gi|68194053|gb|EAN08602.1| Ribosomal protein L25 [Enterococcus faecium DO] gi|257813058|gb|EEV41816.1| ribosomal protein L25 [Enterococcus faecium 1,230,933] gi|257827049|gb|EEV53675.1| ribosomal protein L25 [Enterococcus faecium 1,231,410] gi|291604427|gb|EFF33917.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1162] gi|313644513|gb|EFS09093.1| ribosomal protein L25, Ctc-form [Enterococcus faecium TX0082] Length = 201 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVADLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|28572818|ref|NP_789598.1| 50S ribosomal protein L25/general stress protein Ctc [Tropheryma whipplei TW08/27] gi|71153673|sp|Q83HD6|RL25_TROW8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28410951|emb|CAD67336.1| 50s ribosomal protein L25 [Tropheryma whipplei TW08/27] Length = 187 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + A R GKG AR R G+IPA+ YG P+ + L A +S + N Sbjct: 1 MVYPVVEAESRVGFGKGFARRARAAGKIPAVAYGLKRAPEHVLLPAAQMSLIMRRAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L L I V+ K Q D + +I+ H D L V+E VT+ VP+RF+ ++ Sbjct: 58 ALLQLKIDARESLVLIKQVQRDRIRNIIEHLDMLFVNEDDAVTIRVPLRFVGQS-----Y 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G +V + V++ + IP+++ VD++ L+ G I DI LP+ +S + IA Sbjct: 113 AGTVTSVENYSVAVTLQVSQIPEALVVDVSGLQAGRRIFASDIALPDGALLVSPPRLLIA 172 Query: 183 TIVA 186 + Sbjct: 173 KVDP 176 >gi|304439505|ref|ZP_07399413.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372013|gb|EFM25611.1| 50S ribosomal protein L25 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 209 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 5/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L RD+ GK LR+ G +P ++Y + I + KD+ K +N ++ I Sbjct: 1 MILKLQKRDQHGKNKVDKLRQEGLVPGVVYSKGEEAVSITVVEKDLVKAYE-ENGLSNIF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 D+ ++ K+ Q P + ++H D + + V +PV + Q Sbjct: 60 KADLDGAQKDLLIKEIQKHPFKNQILHFDAYLIDMTQKIRVTIPVVLEGRDNIKA--QPS 117 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 + + + + C ++P V++ D++IGD++ + D+ + EK +A Sbjct: 118 VIMQIIDSIEIECLPGDLPSEAVVNVVDMQIGDNMTVADLDIAGNEKIHIHVDPEEVVAV 177 Query: 184 IVAP 187 + P Sbjct: 178 LSEP 181 >gi|78189123|ref|YP_379461.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium chlorochromatii CaD3] gi|109893352|sp|Q3ARF7|RL25_CHLCH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78171322|gb|ABB28418.1| LSU ribosomal protein L25P [Chlorobium chlorochromatii CaD3] Length = 195 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L R + K A LRK+G +PA++Y + +++ ++K ++S Sbjct: 1 METIVLGVEPR-VIKKNEAEKLRKSGLVPAVVYHKGEETVAVSIQELALTKLVHSAESHI 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 L GK K+ Q PV+D +IHADF S V + VPV +S G++ Sbjct: 60 IDLQFPDGKLK-RSFIKEVQFHPVTDRIIHADFQLFSADEIVEMVVPVSV--SGESVGVE 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNIT 180 +GGKL ++ H ++L ++P+ +D+ L + SIH+ +I + + M + + Sbjct: 117 KGGKLQIIMHSLTLKGKPTDMPEHFVIDITALDLAHSIHVREIPMTNYPGLTIMDEPDAP 176 Query: 181 IATIVAPI 188 + T++A Sbjct: 177 VITVLATR 184 >gi|224438056|ref|ZP_03658995.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter cinaedi CCUG 18818] gi|313144501|ref|ZP_07806694.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] gi|313129532|gb|EFR47149.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818] Length = 178 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG + A D K + K+ + + + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQENIHCAFKLNDFIKAVKHKSTLIFPVKV 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D + + V+ ++YQ DPV++ +IH D L +G VPV K G+K G L Sbjct: 62 DG--KTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSVKGSAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C A +P++ +D++DL +GDSI + D+ + S +++ ++ + ++ Sbjct: 118 FISTKRISVKCTAEKLPNTYELDVSDLDVGDSILIRDLPQLDGVSVLNRPSVAVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|218295193|ref|ZP_03496029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] gi|218244396|gb|EED10921.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermus aquaticus Y51MC23] Length = 205 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R+ + LR+ G++P ++Y N S + + + + K + Sbjct: 2 EYRIKAYYREGEKPQA---LRRAGKLPGVMY-NKSLNRKVYVDLSEFDKVFRQASIHHV- 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L++ V + + L+ H DF V V ++VP+RF+ G+++G Sbjct: 57 IVLELPDGEVPTLVRQVNLNKRRRRPEHVDFF-VLSDEPVEMYVPLRFV--GTPVGVREG 113 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L V ++ + NIP+ I VD++ L IGDS+H D++LPE TIA + Sbjct: 114 GVLQEVHRDILVRVSPRNIPEFIEVDVSGLGIGDSLHAADLKLPEGVKLAINPEETIAAV 173 Query: 185 VAP 187 V P Sbjct: 174 VPP 176 >gi|62297563|sp|P56930|RL25_THETH RecName: Full=50S ribosomal protein L25; Short=TL5 gi|14719583|pdb|1FEU|A Chain A, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|14719586|pdb|1FEU|D Chain D, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc Family Proteins, Complexed With A Fragment Of 5s Rrna. gi|5640135|emb|CAA64209.1| ribosomal protein TL5 [Thermus thermophilus] Length = 206 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR+ G++P ++Y N + + + + K + I Sbjct: 2 EYRLKAYYREGEKPSA---LRRAGKLPGLMY-NRHLNRKVYVDLVEFDKVFRQASIHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + + LD H DF V V ++VP+RF+ G++ G Sbjct: 58 VLELPDGQSLPTLVRQVNLDKRRRRPEHVDFF-VLSDEPVEMYVPLRFVGTPA--GVRAG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + ++ + NIP+ I VD++ L+IGDS+H D++LP TIA + Sbjct: 115 GVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAV 174 Query: 185 VAP 187 V P Sbjct: 175 VPP 177 >gi|297565117|ref|YP_003684089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] gi|296849566|gb|ADH62581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus silvanus DSM 9946] Length = 205 Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E +L A R+ + LR +G++P I+Y N + + + + K + Sbjct: 2 EYRLKAYHRESE---NPERLRDSGKLPGILY-NKQMNEKVYVDLGEFDKVFRQASIHHV- 56 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL++ + V+ + LD H DF +S V ++VP++F+ G++ G Sbjct: 57 ITLELDGKTQDVLVRQVNLDKRKRRPSHVDFYALS-DEPVAMYVPLKFV--GTPQGVRLG 113 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ V ++ + NIPD I VD++ L IGDS+H+ D++LP + + T+ TI Sbjct: 114 GVMDTVLRDIEVKVSPRNIPDFIEVDVSGLGIGDSLHLSDLKLPPGVKLNMKGDSTVVTI 173 Query: 185 VAP 187 V P Sbjct: 174 VPP 176 >gi|15834802|ref|NP_296561.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270284968|ref|ZP_06194362.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Nigg] gi|270288992|ref|ZP_06195294.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum Weiss] gi|301336365|ref|ZP_07224567.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia muridarum MopnTet14] gi|13633862|sp|Q9PLC2|RL25_CHLMU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7190219|gb|AAF39056.1| general stress protein Ctc [Chlamydia muridarum Nigg] Length = 185 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y + + A+ +K L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANVVIDARVFNKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVEDREVRLNIPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DIR+PE ++ L Sbjct: 121 LGGSLRQVIRYMRVVCKPKDIVPFLELDVQSLGLSQTLKLSDIRIPEGIKPVTPLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|315161889|gb|EFU05906.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0645] Length = 202 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSQRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|257870925|ref|ZP_05650578.1| ribosomal protein L25 [Enterococcus gallinarum EG2] gi|257805089|gb|EEV33911.1| ribosomal protein L25 [Enterococcus gallinarum EG2] Length = 204 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G D PIA++A ++ + L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYQVDSTPIAVNAAELERLLR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+++ + V+ + K++Q D + L H +F+ V V + + + G+K G Sbjct: 61 ITMNLEGKKVNTLIKEFQSDTFTRALTHVEFISVDMNEETEVEAELTLV--GDAAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ L+IGD++ + D+ + + +++ I + Sbjct: 119 GVLTQNLYSVVVSATPDKLPERIEVDVTGLEIGDALTVGDLEKNDDYTIVTEAEEQIVAV 178 Query: 185 V 185 Sbjct: 179 A 179 >gi|317120947|ref|YP_004100950.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] gi|315590927|gb|ADU50223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter marianensis DSM 12885] Length = 207 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 10/184 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTI 64 L AV R+ G AR +R+ G IPA++YG P+ L A++ + ++ +T Sbjct: 5 LRAVPREP---GHARRVRREGGIPAVLYGPSG-NFPVRLDAREFHRLLASGRARGVLTVE 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L D + + K+ Q P L+H D +V E V VP+ ++ + Sbjct: 61 LVRDGQTRQLSAMVKELQWHPARGDLLHVDLFEVREDEPVRAVVPIALTGTEEAE---KR 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + E+ + C IP + D+ +L +G+ + ++D+ +P + ++ + +A + Sbjct: 118 GIVQHQLAELEIECLPRYIPPVVEADVANLPVGEEVRVKDLVVPPQVRVLNDPDEIVAVL 177 Query: 185 VAPI 188 + P Sbjct: 178 LPPK 181 >gi|166154141|ref|YP_001654259.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 434/Bu] gi|166155016|ref|YP_001653271.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335381|ref|ZP_07223625.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis L2tet1] gi|226736297|sp|B0B926|RL25_CHLT2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736299|sp|B0BAQ5|RL25_CHLTB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|165930129|emb|CAP03613.1| LSU ribosomal protein L25 [Chlamydia trachomatis 434/Bu] gi|165931004|emb|CAP06567.1| LSU ribosomal protein L25 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 185 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V ++VP+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNVPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|189462542|ref|ZP_03011327.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] gi|189430703|gb|EDU99687.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136] Length = 198 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 97/188 (51%), Gaps = 11/188 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG------NMSDPKPIALSAKDISKRLY 56 K ++ +R + GK +A LR+N +P ++YG ++ + K +Y Sbjct: 1 MKSIEIKGSLRTETGKKAAHSLRQNNGVPCVLYGMQKDENGNQVATHFTVTVDGLRKLVY 60 Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + + ++ L+I ++V+ I KD Q PV+D ++H DFLQ++E + + + VPV+ Sbjct: 61 TPHIY--VVDLNIDGKIVNAIMKDIQFHPVTDAILHVDFLQINEENPIVMEVPVQLE--G 116 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 + G+K GGKL + ++ + N IP+ + V++ +L +G +I + ++ E + ++ Sbjct: 117 LAEGVKAGGKLALQTRKLKVKALYNLIPERLVVNVTNLGLGKTIKVGELNY-EGLTLLNA 175 Query: 177 LNITIATI 184 + + Sbjct: 176 KEAVVCAV 183 >gi|254518677|ref|ZP_05130733.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226912426|gb|EEH97627.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 198 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L+ RD +A+ LR+ G++P I+YG + + ++ + + SKN +L Sbjct: 3 NLNLNKRDSNISNNAKKLRRAGKVPGILYGKSLNDFMFEVGELELCREI-SKNGEHGVLD 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 D+ + KD Q DPVS +IH D ++ + + VP+ ++ E+ K+G Sbjct: 62 FDLNGCAHKALIKDVQRDPVSHKIIHLDLEELQQNQKIVSSVPIHYVGESHLG--KRGMV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C A+ +P + +++N G + D+ + + S + LN IA++ Sbjct: 120 LQKEKDSIRVECTADTLPKHVDININRSDDGYVYRVGDLEIASELSIIDDLNTVIASVS 178 >gi|182438175|ref|YP_001825894.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778825|ref|ZP_08238090.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] gi|178466691|dbj|BAG21211.1| putative 50S ribosomal protein L25 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659158|gb|EGE44004.1| 50S ribosomal protein L25 [Streptomyces cf. griseus XylebKG-1] Length = 195 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ +R + GKG+AR +R+ ++PA++YG+ ++P + L ++ L + N Sbjct: 1 MAEIKLATEVRTEFGKGAARRVRRADRVPAVVYGHGAEPVHVTLPGHELLLALRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L++ + VIPK Q P+ + H D L V G V V + V + Sbjct: 58 VLIGLELDGKDALVIPKAVQRHPLKGTIEHVDLLTVKRGEKVQVEIAVHAEGDLAPGA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+S+TV + L GDSI +DI LP+ + + + Sbjct: 116 --NLLEFVQNTLLVEAEATHIPESVTVSVAGLDAGDSIVAKDIALPKGSVLAGDEDAIVI 173 Query: 183 TIV 185 +V Sbjct: 174 QVV 176 >gi|15605533|ref|NP_220319.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D/UW-3/CX] gi|237803230|ref|YP_002888424.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/Jali20/OT] gi|237805151|ref|YP_002889305.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis B/TZ1A828/OT] gi|255311635|ref|ZP_05354205.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276] gi|255317936|ref|ZP_05359182.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 6276s] gi|255349199|ref|ZP_05381206.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70] gi|255503736|ref|ZP_05382126.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis 70s] gi|255507417|ref|ZP_05383056.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis D(s)2923] gi|7674229|sp|O84805|RL25_CHLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|3329265|gb|AAC68394.1| General Stress Protein [Chlamydia trachomatis D/UW-3/CX] gi|231273451|emb|CAX10366.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274464|emb|CAX11259.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/Jali20/OT] gi|289525844|emb|CBJ15325.1| LSU ribosomal protein L25 [Chlamydia trachomatis Sweden2] gi|296435426|gb|ADH17604.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/150] gi|296436350|gb|ADH18524.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9768] gi|296437281|gb|ADH19451.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11222] gi|296438209|gb|ADH20370.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/11074] gi|296439143|gb|ADH21296.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis E/11023] gi|297140710|gb|ADH97468.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis G/9301] gi|297748927|gb|ADI51473.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-EC] gi|297749807|gb|ADI52485.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-LC] Length = 185 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V +++P+R IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNIPIRCINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|32266993|ref|NP_861025.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter hepaticus ATCC 51449] gi|71153145|sp|Q7VG30|RL25_HELHP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|32263045|gb|AAP78091.1| ribosomal protein L25 [Helicobacter hepaticus ATCC 51449] Length = 178 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K A+ LR +G + A IYG A D K + K T I + Sbjct: 2 LEGQIRESISKSQAKALRNDGYLIANIYGKGQQNIHCAFKLNDFIKAMKQKT--TLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ ++YQ DPV++ LIH D L +G VPV K G+K G L Sbjct: 60 QVGGKTLEVVIQEYQKDPVTNTLIHVDLLLAQKGILNKYKVPVIVKGNAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C A N+P++ +D++DL +GDSI + D+ + + +++ ++ + ++ Sbjct: 118 FISTKRISVKCAAENLPNAYEIDVSDLDVGDSILIRDLPQFDNVNVLNRPSVAVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|76789542|ref|YP_328628.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia trachomatis A/HAR-13] gi|109893354|sp|Q3KKP2|RL25_CHLTA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|76168072|gb|AAX51080.1| LSU ribosomal protein L25P [Chlamydia trachomatis A/HAR-13] Length = 185 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A+ SK L S + Sbjct: 1 MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSKFLSTLESGALAS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ TL + + KD Q + +IH DF ++ +G V +++P+R+IN G+K Sbjct: 61 TVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRLNIPIRYINTVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + ++ + DI +PE ++ L Sbjct: 121 LGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDICIPEGIRPVTSLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVA 183 >gi|154149398|ref|YP_001406855.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter hominis ATCC BAA-381] gi|166223671|sp|A7I2W4|RL25_CAMHC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|153805407|gb|ABS52414.1| ribosomal protein L25, Ctc-form [Campylobacter hominis ATCC BAA-381] Length = 178 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ S++ LR++G + A IY A D K + +K T + Sbjct: 2 LEGIVRESIGRKSSKALRRDGYLIANIYAKGFKNINAAFKVNDFIKVVKAKT--TLPFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + V+ +DYQ PV++ L H D V + VPV+ + K G++ G L Sbjct: 60 KIADKTYKVVVQDYQKHPVTNALKHVDLRIVLDNEISHYLVPVKIVGVAK--GLRNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ C ++P+ +D++DL + DS+ + DI+LP+ S + ++ + + Sbjct: 118 VQSKRRLTVKCAGKDLPNEFVLDVSDLDVNDSLLVRDIKLPDNVSIVENNSVAVVGVS 175 >gi|315166971|gb|EFU10988.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1341] Length = 202 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKSINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|268678853|ref|YP_003303284.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] gi|268616884|gb|ACZ11249.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sulfurospirillum deleyianum DSM 6946] Length = 178 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR++G + A IYG A A + K SK + I + Sbjct: 2 LEGIIRDSIEKKATKALRRDGYLIANIYGKGEQNINAAFKANEFIKAAKSK--DSLIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + +V+ +DYQ DPV+ L+H D G VPV+ + K G K G L Sbjct: 60 KVAGTEYNVVIQDYQRDPVNSNLLHVDLRIALPGVLTKYLVPVKTVGIPK--GTKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++ C A N+P+ TVD+++L +G++I + DI++P M + ++IA ++ Sbjct: 118 IQSKKRLAVKCTAENLPNDFTVDVSELDVGETILVRDIQVPANVKIMDETRVSIAGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|315148326|gb|EFT92342.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4244] Length = 202 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|300932604|ref|ZP_07147860.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium resistens DSM 45100] Length = 222 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 7/183 (3%) Query: 3 QKECK-LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L +R + GKG++R LR++ ++P ++YGN DP + + ++ L ++ + Sbjct: 1 MAELTRLKGEVRTEFGKGASRRLRRDFRVPVVVYGNHLDPMHVHVDILELQAILRNE-GV 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 ++ L++ + V+ K + ++ + HAD L V G V V VPV E Sbjct: 60 NAVIELEVEGQDHLVMIKAVDQNVLTLDVDHADMLNVKRGEKVEVEVPVVVNGEPAPGA- 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 ++ V +L +IP+ I V + +IGD I D+++P S +S+ + I Sbjct: 119 ----QVMQDADFVLVLADVLDIPEEIEVSVEGKEIGDQILAGDLQIPGNASLVSEEDTLI 174 Query: 182 ATI 184 + Sbjct: 175 VNV 177 >gi|325954510|ref|YP_004238170.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] gi|323437128|gb|ADX67592.1| 50S ribosomal protein L25 [Weeksella virosa DSM 16922] Length = 206 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + V R+ VGK + R LR Q+P ++YG + A K +Y+ T Sbjct: 1 MKSITIQGVKRESVGKVATRALRNAEQVPCVVYG-GQETIHFAADEKAFKGLVYTPEAHT 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L+ G VH I +D Q PV+D ++HADF Q+ + +T+ VPVR + ++ G+ Sbjct: 60 VNVELNDGT-KVHAILQDIQFHPVTDRILHADFYQLKDDKEITIEVPVRLV--GRARGVV 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L ++ + N+PD + +D+ ++IG ++E ++ +K + N + Sbjct: 117 AGGVLRFNMRKLKVRAIPANLPDEVVIDITSMRIGAKKYVESLK-NDKYTFAHPDNSVVV 175 Query: 183 TI 184 I Sbjct: 176 AI 177 >gi|257459024|ref|ZP_05624143.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] gi|257443409|gb|EEV18533.1| ribosomal protein L25, Ctc-form [Campylobacter gracilis RM3268] Length = 178 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD +GK +++ L+++G + A IY D A D K + + Sbjct: 2 LEGIVRDSIGKRASKSLKRDGYLIANIYAKGFDNINAAFKVNDFIKAMR--AKEDLPFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + VI ++YQ PV++ L H D V + VPV+ K G+K G L Sbjct: 60 SVGGKTYRVIVQEYQKHPVTNTLTHVDLRVVQDDVVSKYLVPVKVTGVAK--GLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++ C ++P+ T+D++DL +GDS+ + DI + E S + ++ + + + Sbjct: 118 VQSKRRIAVKCAGKDLPNDFTLDVSDLDVGDSLLIRDIPVKEGVSIILDGSVAVVGVTSA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|255321864|ref|ZP_05363014.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] gi|255300968|gb|EET80235.1| ribosomal protein L25, Ctc-form [Campylobacter showae RM3277] Length = 178 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKE--SLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ +YQ DPV++ L H D G +PV G+K G L Sbjct: 60 KVGGKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPV--KPYGTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +++ C A N+P+S +D++ L I D++ + DI +P + + + + ++ Sbjct: 118 IVSKRRLAVKCTAENLPNSFDIDVSGLDIDDTVLVRDITVPAGVTMIDADRVAVLGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|57242055|ref|ZP_00369995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315638227|ref|ZP_07893409.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] gi|57017247|gb|EAL54028.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter upsaliensis RM3195] gi|315481763|gb|EFU72385.1| 50S ribosomal protein L25 [Campylobacter upsaliensis JV21] Length = 178 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K T I + Sbjct: 2 LEGIIRESIGRKAAKALKRDGYLIANIYGKGLENIHAAFKVNDFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGAKTLSVVVVDYQKDPVTSDLKHVDLKVAQKGVVSKYMVPVKVV--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ ++DI +P+ S + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVKDIVVPQGVSIIEADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|307289481|ref|ZP_07569429.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|306499577|gb|EFM68946.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109] gi|315164680|gb|EFU08697.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1302] Length = 202 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKITVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|229548761|ref|ZP_04437486.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257421071|ref|ZP_05598061.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|312951809|ref|ZP_07770700.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|229306101|gb|EEN72097.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis ATCC 29200] gi|257162895|gb|EEU92855.1| 50S ribosomal protein L25 [Enterococcus faecalis X98] gi|310630212|gb|EFQ13495.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102] gi|315154236|gb|EFT98252.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0031] gi|315156368|gb|EFU00385.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0043] Length = 202 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + ++ ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKITVDEKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|226321217|ref|ZP_03796751.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] gi|226233371|gb|EEH32118.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 29805] Length = 182 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|327534405|gb|AEA93239.1| 50S ribosomal protein L25 [Enterococcus faecalis OG1RF] Length = 202 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNSYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|150387890|ref|YP_001317939.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] gi|149947752|gb|ABR46280.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus metalliredigens QYMF] Length = 200 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 5/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L +R++ G G A R+ G++PA++Y +P+ L+ K++ K L + Sbjct: 1 MGTPILKYTIREEAGTGGASKARRAGEVPAVLYSKGEVTQPVYLNTKELEKILSIYGG-S 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + LD + I K+ Q + + + L+H D ++ E + + +P+ +N+ + Sbjct: 60 SRIALDHEGKKCFAIIKEIQKNMLKNSLLHVDLQKLDENQKIRMTIPIYILNKEAVETLA 119 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNIT 180 + + + EV + ++P+ I VD + LK ++ M+D+ + + L Sbjct: 120 E--IVQIQQDEVEIQAYPRDLPEKIEVDASLLKDQANLTMKDLNIVGNTAIEILDDLENV 177 Query: 181 IATIV 185 +AT+ Sbjct: 178 VATLA 182 >gi|224026159|ref|ZP_03644525.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] gi|224019395|gb|EEF77393.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM 18228] Length = 198 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG----NMSDPKPIALSAKDISKRLYSK 58 K ++ +R + GK + LRKN +P ++YG +P + R Sbjct: 1 MKSIEIKGSLRTETGKKATHSLRKNNGVPCVLYGIQKDENGNPVATHFTVTTDGLRNLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L+I ++V+ I KD Q PV+D ++H DFLQ+ E + + + VPV+ + Sbjct: 61 TPHIYVVDLNIDGKVVNAIMKDIQFHPVTDAILHVDFLQIDEANPIVMEVPVQLE--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GGKL + ++ + N IP+ + VD+ L +G +I + ++ E ++ Sbjct: 119 EGVKAGGKLALQIRKLKVKALYNVIPERLIVDVTSLGLGKTIKVGELNY-EGLQLLNAKE 177 Query: 179 ITIATI 184 + + Sbjct: 178 AVVCAV 183 >gi|327438089|dbj|BAK14454.1| ribosomal protein L25 [Solibacillus silvestris StLB046] Length = 217 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 96/186 (51%), Gaps = 4/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ + LR GQ+ ++YG ++ PI+L +D +K + + T++ Sbjct: 2 TTVLQATKRETGKRSILSQLRNEGQLAGVLYGYETETTPISLDYRDTAKAVQTY-GTTSV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +++G + V+ + D Q D + + H DFL ++ + V VP+ FI S G+K+G Sbjct: 61 FKIEVGGKRVNAVLTDIQRDALKGHVKHVDFLAINMKEELEVDVPIAFI--GTSVGVKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI-RLPEKTSSMSQLNITIAT 183 G + H + + + IPD+I +D++DL +G+S+ + ++ + + + T+AT Sbjct: 119 GVITQPNHTLKIKVNPSKIPDTIEIDVSDLAVGESLSVGNVRDQFTAFTIVDNDDYTLAT 178 Query: 184 IVAPIS 189 + P + Sbjct: 179 VTPPAA 184 >gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis V583] gi|227517790|ref|ZP_03947839.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227554936|ref|ZP_03984983.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255973896|ref|ZP_05424482.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256617695|ref|ZP_05474541.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256761581|ref|ZP_05502161.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256957316|ref|ZP_05561487.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256959948|ref|ZP_05564119.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256964357|ref|ZP_05568528.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|257077688|ref|ZP_05572049.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|257081067|ref|ZP_05575428.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|257083739|ref|ZP_05578100.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|257086164|ref|ZP_05580525.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|257089237|ref|ZP_05583598.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257415387|ref|ZP_05592381.1| ribosomal protein L25 [Enterococcus faecalis AR01/DG] gi|257418421|ref|ZP_05595415.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|293384300|ref|ZP_06630186.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|293388464|ref|ZP_06632970.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294779202|ref|ZP_06744609.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|300859682|ref|ZP_07105770.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|307270120|ref|ZP_07551438.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|307271421|ref|ZP_07552694.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|307284347|ref|ZP_07564512.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|312901641|ref|ZP_07760911.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|312905053|ref|ZP_07764178.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|312907105|ref|ZP_07766098.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|312979316|ref|ZP_07791014.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|68053202|sp|Q837L6|RL25_ENTFA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29342869|gb|AAO80633.1| ribosomal protein L25 [Enterococcus faecalis V583] gi|227074751|gb|EEI12714.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX0104] gi|227175932|gb|EEI56904.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis HH22] gi|255966768|gb|EET97390.1| ribosomal protein L25 [Enterococcus faecalis T2] gi|256597222|gb|EEU16398.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200] gi|256682832|gb|EEU22527.1| ribosomal protein L25 [Enterococcus faecalis T3] gi|256947812|gb|EEU64444.1| ribosomal protein L25 [Enterococcus faecalis DS5] gi|256950444|gb|EEU67076.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96] gi|256954853|gb|EEU71485.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704] gi|256985718|gb|EEU73020.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1] gi|256989097|gb|EEU76399.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol] gi|256991769|gb|EEU79071.1| 50S ribosomal protein L25/general stress protein [Enterococcus faecalis Fly1] gi|256994194|gb|EEU81496.1| ribosomal protein L25 [Enterococcus faecalis D6] gi|256998049|gb|EEU84569.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188] gi|257157215|gb|EEU87175.1| ribosomal protein L25 [Enterococcus faecalis ARO1/DG] gi|257160249|gb|EEU90209.1| 50S ribosomal protein L25 [Enterococcus faecalis T11] gi|291078373|gb|EFE15737.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712] gi|291082154|gb|EFE19117.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613] gi|294453713|gb|EFG22108.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1] gi|295113967|emb|CBL32604.1| LSU ribosomal protein L25P [Enterococcus sp. 7L76] gi|300850500|gb|EFK78249.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11] gi|306503287|gb|EFM72539.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860] gi|306511885|gb|EFM80882.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855] gi|306513555|gb|EFM82169.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248] gi|310626882|gb|EFQ10165.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512] gi|310631632|gb|EFQ14915.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635] gi|311287910|gb|EFQ66466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516] gi|311291252|gb|EFQ69808.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470] gi|315027593|gb|EFT39525.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2137] gi|315031326|gb|EFT43258.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0017] gi|315035357|gb|EFT47289.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0027] gi|315145201|gb|EFT89217.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2141] gi|315151610|gb|EFT95626.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0012] gi|315170844|gb|EFU14861.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1342] gi|315172713|gb|EFU16730.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1346] gi|315575275|gb|EFU87466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309B] gi|315576567|gb|EFU88758.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0630] gi|315581358|gb|EFU93549.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309A] gi|329577703|gb|EGG59130.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1467] Length = 202 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|18310856|ref|NP_562790.1| general stress protein [Clostridium perfringens str. 13] gi|170764102|ref|ZP_02632078.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170764291|ref|ZP_02640532.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|182420441|ref|ZP_02641127.2| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] gi|182626124|ref|ZP_02953884.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|71153135|sp|Q8XJ87|RL25_CLOPE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|18145538|dbj|BAB81580.1| probable general stress protein [Clostridium perfringens str. 13] gi|170662463|gb|EDT15146.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens E str. JGS1987] gi|170713646|gb|EDT25828.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens CPE str. F4969] gi|177908561|gb|EDT71086.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens D str. JGS1721] gi|182382196|gb|EDT79675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens NCTC 8239] Length = 203 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L R+K + S+R R+ G +P +IYG + + +++ S Sbjct: 1 MME--NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHA-LSVTGE 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L+++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E Sbjct: 58 HGLLSINSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN-- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K L + + C +NIP + +++ K GD + D+ + + + LN + Sbjct: 116 KLDAVLQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIV 175 Query: 182 ATIV 185 A++ Sbjct: 176 ASVS 179 >gi|157163952|ref|YP_001466456.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter concisus 13826] gi|112801679|gb|EAT99023.1| ribosomal protein L25, Ctc-form [Campylobacter concisus 13826] Length = 178 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K + + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKE--SLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ +V+ DYQ D V+ L H D G +PV+ + G+K G L Sbjct: 60 KVGGKVYNVVIVDYQRDVVTSDLKHVDLKVALPGVLSKYMIPVKPV--GTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+S VD++ L I D+I + DI P+ + + + + ++ Sbjct: 118 IQSKRRLCVKCTAENLPNSFDVDVSKLDIDDTILVRDITAPKGVTIIDADRVAVLGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|332687114|ref|YP_004456888.1| 50S ribosomal protein L25p [Melissococcus plutonius ATCC 35311] gi|332371123|dbj|BAK22079.1| LSU ribosomal protein L25p [Melissococcus plutonius ATCC 35311] Length = 209 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L+ R + LR+ G++PAI+YG+ PI K++ + N + Sbjct: 2 SVSLAVKERAVRPRSIRNQLRRKGKVPAIVYGHEIKSIPIFFDEKEL-LYILHNNGSNVV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ I + ++ + + QLD + + HA+FL V+ V V ++ G+K G Sbjct: 61 ITMTINNKKINTLLTNTQLDTFNKQMRHAEFLSVNMNEATEVETDVVLT--GEASGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + + + +P++I VD+++L IG++I + D+ ++ + IA++ Sbjct: 119 GILTQNLYTILVSTTPEQLPENIEVDISNLGIGEAITVGDLPKNPTYELVTSPDEQIASV 178 Query: 185 V 185 Sbjct: 179 A 179 >gi|293567818|ref|ZP_06679159.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] gi|291589403|gb|EFF21210.1| ribosomal protein L25, Ctc-form [Enterococcus faecium E1071] Length = 202 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 3/182 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PA++YG + PI+ +SK L ++ T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKVPAVVYGYKVESTPISFDGLTLSKLLR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+DI + V+ + Q + ++ HA+FL V+ V + +S G K G Sbjct: 61 ITMDIDGQKVNTLVHKIQTNTFTNHFEHAEFLSVNMSEETEVE--TEVVLVGESVGAKSG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ I VD+ +L++GDSI + D+ + ++ IA + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERIEVDVTNLELGDSITVVDLPKNDDYKFVTDSEEQIAAV 178 Query: 185 VA 186 VA Sbjct: 179 VA 180 >gi|15644375|ref|NP_229427.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga maritima MSB8] gi|7674238|sp|Q9X1W2|RL25_THEMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4982200|gb|AAD36694.1|AE001806_4 general stress protein Ctc [Thermotoga maritima MSB8] Length = 215 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 7/188 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK---NFMT 62 L A +R+ GK AR LR+ G++PA++YG ++P P+ + + K ++ + Sbjct: 2 VSLEARVREVKGKREARRLRRRGEVPAVVYGPATEPIPVKIKRSVLEKIFHTISEATPIQ 61 Query: 63 TILTLDIGKE--LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I+ D G V K Q D VS+ ++H DF + ++G + ++VP++ + K G Sbjct: 62 LIIKDDQGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVV--GKPVG 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +++GG L V E+ + + +P I VD++ L +GD IH D++LPE + + Sbjct: 120 VEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLEEEEA 179 Query: 181 IATIVAPI 188 + +++ P Sbjct: 180 VVSVLVPK 187 >gi|223038596|ref|ZP_03608889.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] gi|222879998|gb|EEF15086.1| ribosomal protein L25, Ctc-form [Campylobacter rectus RM3267] Length = 178 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +++ LR++G + A IYG + A D K + K + + Sbjct: 2 LEGIVRESIGKKASKALRRDGYLIANIYGKGLENVQAAFKINDFIKEVRKKE--SLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G++ + V+ +YQ DPV++ L H D G +PV G+K G L Sbjct: 60 KVGEKTLKVVVVEYQKDPVTNALKHVDLKVALPGVVSKYMIPV--KPYGTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V +++ C A N+P+S +D++ L + D++ + DI +P + + + + ++ Sbjct: 118 IVSKRRLAVKCAAENLPNSFDIDVSGLDVDDTVLVRDIAVPAGVTIVDADRVAVLGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|213965445|ref|ZP_03393640.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] gi|213951829|gb|EEB63216.1| ribosomal protein L25, Ctc-form [Corynebacterium amycolatum SK46] Length = 213 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 7/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 K+ A R + GKG+AR R G IP +IYG D PK I + D + + + + Sbjct: 7 IKIEARNRTEFGKGAARRARVAGDIPVVIYGADLDAPKHILVDTLDFHAVIR-NHGVNAV 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L ++I E + K +P++ + HAD L + V V VPV E + Sbjct: 66 LDVNIEGESQLSMVKAVDQNPLTLDIDHADLLAIHRDEKVEVEVPVVPTGELAPGAL--- 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 L + + P IP+ I V + ++G +H D+ LPE ++ I I Sbjct: 123 --LMQDAETILVNAPVLAIPEEIEVSVEGAEVGTMVHAGDVTLPEGLVLTDDADLLIFNI 180 Query: 185 VAP 187 V P Sbjct: 181 VEP 183 >gi|322433960|ref|YP_004216172.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] gi|321161687|gb|ADW67392.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidobacterium sp. MP5ACTX9] Length = 232 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%) Query: 1 MDQKECK-LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M ++ + + A R K K AR +R G+IPA +YG D + + K ++K L+S+ Sbjct: 1 MASQKFEAVVATPRTGKFNKNHARRVRVAGKIPATVYGAGIDAVAVTVDPKVVTKILHSE 60 Query: 59 NFMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + TI L++ G L + D+Q +P+ L+HADF +++ + V VPV Sbjct: 61 SGHNTIFDLNVEGAPLAKAMIVDWQHEPIKGKLLHADFKRIAMDKAMRVSVPVLLSGIPV 120 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 GG L+ + EV + C ++IPD I VD+ +L++ +IH+ D+ + Sbjct: 121 GVKTG-GGVLDQIMREVEIECLPSDIPDHIDVDVANLELYGAIHISDLPHSGSIKFLGDE 179 Query: 178 NITIATIV 185 +A + Sbjct: 180 TALVAHVT 187 >gi|229546665|ref|ZP_04435390.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256854329|ref|ZP_05559693.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|307276208|ref|ZP_07557338.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|307296166|ref|ZP_07575996.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|229308232|gb|EEN74219.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis TX1322] gi|256709889|gb|EEU24933.1| ribosomal protein L25 [Enterococcus faecalis T8] gi|306496140|gb|EFM65720.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411] gi|306507120|gb|EFM76260.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134] gi|315030511|gb|EFT42443.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4000] gi|315159965|gb|EFU03982.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0312] gi|323480002|gb|ADX79441.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 62] Length = 202 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGANTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + D+ + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|293189159|ref|ZP_06607884.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] gi|292821897|gb|EFF80831.1| ribosomal protein L25, Ctc-form [Actinomyces odontolyticus F0309] Length = 202 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 7/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ G++P ++YG+ ++P+ + + D+ + ++ L Sbjct: 7 LLAEERSEFGKGAARRARRAGKVPTVLYGHGAEPRHLDVPGHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV + E+ + + Sbjct: 65 KIEGKTQLALVKDVQVHPVRRHILHADFLAVKAGEKVDVEVPVVVVGESAPGTVHSVEEF 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + PA +IP+S+ V + ++ G ++H+ D+ LP I + Sbjct: 125 -----TILVKAPATSIPESLEVSIEGVEAGSAVHVSDLLLPAGVEVELDPETVIVAVQ 177 >gi|168211678|ref|ZP_02637303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] gi|170710354|gb|EDT22536.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens B str. ATCC 3626] Length = 202 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ S +L+ Sbjct: 3 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHA-LSVTGEHGLLS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 62 INSQESSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 120 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 178 >gi|331268280|ref|YP_004394772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329124830|gb|AEB74775.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 192 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ R+K LR+NGQ+P I+YG ++ PI ++ + + L N Sbjct: 1 MSQVAIAINEREKTDTNG--RLRRNGQVPCIMYGEHLEKAIPIKVNYNQLIRILK-TNSK 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +IL L + + + + K+ Q D V+ +IH DF VS+ + + +P+ F +K Sbjct: 58 GSILKLQLNNQTKNCVIKEIQKDTVTGKIIHIDFQNVSKDEIIKMTIPIEFTGIDKLQSK 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + E+ + IP++I +D + + + + + DI+LPE +S N + Sbjct: 118 RLILETFIT--EIDMQGKVQEIPETIKIDASKMNFNNKLFIHDIKLPEGIRLLSDPNALV 175 Query: 182 ATI 184 A I Sbjct: 176 AVI 178 >gi|218249528|ref|YP_002375285.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225549827|ref|ZP_03770790.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|226736282|sp|B7J0N2|RL25_BORBZ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|218164716|gb|ACK74777.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi ZS7] gi|225369584|gb|EEG99034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 118a] gi|312147892|gb|ADQ30551.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi JD1] Length = 182 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|154174063|ref|YP_001408881.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter curvus 525.92] gi|112803724|gb|EAU01068.1| ribosomal protein L25, Ctc-form [Campylobacter curvus 525.92] Length = 178 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK SA+ LR++G + A IYG + A D K K T + Sbjct: 2 LEGIVRESIGKKSAKALRRDGYLIANIYGKGLENVAAAFKVNDFIKEARKKE--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ +V+ DYQ D V++ L H D G +PV I G+K G L Sbjct: 60 KVGGKVYNVVIVDYQRDVVTNDLKHVDLKVALPGVLSKYMIPVNPI--GTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+S +D++ L + D+I + DI P S + + + ++ Sbjct: 118 IQSKRRLCVKCTAENLPNSFDIDVSKLDVDDTILVRDITAPAGVSIVDADRVAVLGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|169343699|ref|ZP_02864698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] gi|169298259|gb|EDS80349.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens C str. JGS1495] Length = 203 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L R+K + S+R R+ G +P +IYG + + +++ S Sbjct: 1 MME--NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHV-LSVTGE 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +L+++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E Sbjct: 58 HGLLSINSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN-- 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K L + + C +NIP + +++ K GD + D+ + + + LN + Sbjct: 116 KLDAVLQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIV 175 Query: 182 ATIV 185 A++ Sbjct: 176 ASVS 179 >gi|110800820|ref|YP_696556.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium perfringens ATCC 13124] gi|123049713|sp|Q0TP84|RL25_CLOP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110675467|gb|ABG84454.1| 50S ribosomal protein L25 [Clostridium perfringens ATCC 13124] Length = 202 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 3/179 (1%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L R+K + S+R R+ G +P +IYG + + +++ S +L+ Sbjct: 3 NLQVNQREKKTRHSSRQCRRKGLVPGVIYGKGINNFLFEIGELELNHA-LSVTGEHGLLS 61 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ + ++ + K+ Q DPV+ ++H D +V + VP+ ++ E K Sbjct: 62 INSQEGSLNTLIKEVQRDPVTRRVLHIDLEKVEGNEEIETAVPINYVGEEYIN--KLDAV 119 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + + C +NIP + +++ K GD + D+ + + + LN +A++ Sbjct: 120 LQKNLDSIKVKCSPSNIPKGVNLNVGRAKPGDQFKIADVEFGNEITVVDDLNSIVASVS 178 >gi|163789595|ref|ZP_02184033.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] gi|159875127|gb|EDP69193.1| Ribosomal protein L25 (general stress protein Ctc) [Carnobacterium sp. AT7] Length = 203 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K++A++R +VG +A RK ++ A+I G P++L +KD+ L + Sbjct: 1 MKVNAILRTEVGSAAANRDRKEKKVTAVINGKGITSTPVSLDSKDLDNVLKTLGKNAIFD 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + E VI K+ Q + + ++ + V +G +TV V + N + G Sbjct: 61 VVVKDGETHQVIIKEIQSATLVNQILDVELQVVQKGEKLTVTVQINVENAENV----KRG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++ +E+ + NIP T+D L+IGDS+ + DI++ + + +S T+ +++ Sbjct: 117 IVSQTLNELEIETLPANIPTEFTLDACALEIGDSLTVSDIKVDKSITVLSDPEQTVVSVL 176 Query: 186 API 188 P Sbjct: 177 PPS 179 >gi|195942003|ref|ZP_03087385.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi 80a] gi|312149616|gb|ADQ29687.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi N40] Length = 182 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVRVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|317152594|ref|YP_004120642.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] gi|316942845|gb|ADU61896.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio aespoeensis Aspo-2] Length = 199 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 6/187 (3%) Query: 3 QKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN-- 59 E +L+ R K GKG R LR +P I Y + + + K Sbjct: 1 MAELLQLNVQERTKTGKGHNRRLRLKEMVPGIYYDQKGANIAVQVKLVPLQKAYAKVGNA 60 Query: 60 -FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +L + E + + + +PV+ + H DF V + V V + +K Sbjct: 61 KVFELVLEREGKTETMPALLWRVRNEPVTGMPEHVDFFGVDLTKDIKVAVHYELVGTSK- 119 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GG+L + ++C IP+SI +D+ DL I DS+++E I PE + + N Sbjct: 120 -GVKLGGRLQQFRDTIEVICKPMTIPESIVIDITDLDILDSVYIESIAFPEGVTPVFDEN 178 Query: 179 ITIATIV 185 + I Sbjct: 179 YAVLHIA 185 >gi|319441660|ref|ZP_07990816.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium variabile DSM 44702] Length = 216 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 6/187 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K ++A R + GKG+AR LR+ ++PA++Y N +P ++ + + + + Sbjct: 1 MATKIIDIAAQPRTEFGKGAARRLRRAWRVPAVVYANHQEPVHVSFDLLEF-QGILRNHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + ++ +D+ E + K + ++ + HAD L V TV V VPV E Sbjct: 60 VNALVDVDVDGEKHLALIKSVDQNVLTFDIDHADLLAVKRDETVEVDVPVIVEGEPTP-- 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 G + V++ +IP+ +TV L +IGD I DI LP + S Sbjct: 118 ---GTEYIQDADTVTVEANVLSIPEELTVSLEGKEIGDQILAGDITLPAGVTLTSDAETL 174 Query: 181 IATIVAP 187 + AP Sbjct: 175 VVNFTAP 181 >gi|320160883|ref|YP_004174107.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] gi|319994736|dbj|BAJ63507.1| 50S ribosomal protein L25 [Anaerolinea thermophila UNI-1] Length = 210 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 5/177 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L A R A+ LR+ G +PA++YG PI L A + + +K + Sbjct: 1 MEKIVLQAQRRTLERT--AKALRREGYLPAVMYGAHFPSTPILLDAHNAGLK-LAKVSSS 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T++ +++ E + ++ Q D + + L+H DF VS + V + F + + Sbjct: 58 TLVYIELDGETHAALVREKQRDYIKNRLLHVDFQVVSLTEKIRTTVSLHFEGVSPAV-KD 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLN 178 G + EV + ++P+ I VDL+ L +IGD+IH+ D+ + + ++ + Sbjct: 117 YNGVVVTSLDEVEVEALPQDLPERIVVDLSKLARIGDTIHVRDLEVAKGVKVLNDPD 173 >gi|216264210|ref|ZP_03436202.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] gi|215980683|gb|EEC21490.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 156a] Length = 182 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|226321251|ref|ZP_03796779.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] gi|226233283|gb|EEH32034.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi Bol26] Length = 182 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDISHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|315636066|ref|ZP_07891323.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] gi|315479635|gb|EFU70311.1| 50S ribosomal protein L25 [Arcobacter butzleri JV22] Length = 178 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L N T + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLR--NKETLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + K G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVGTAK--GLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + + N+P+ I +D+ +L GD+I + DI+ PE + + ++ Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFPENVDCYLDPRVPVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|313635141|gb|EFS01467.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL N1-067] gi|313639814|gb|EFS04543.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL S4-171] Length = 207 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ D L+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + + T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQVEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|57168447|ref|ZP_00367581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|305432866|ref|ZP_07402024.1| 50S ribosomal protein L25 [Campylobacter coli JV20] gi|57020255|gb|EAL56929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter coli RM2228] gi|304444020|gb|EFM36675.1| 50S ribosomal protein L25 [Campylobacter coli JV20] Length = 178 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A D K + K T + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNDFIKEVRKKT--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIT--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|57237362|ref|YP_178375.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni RM1221] gi|86149073|ref|ZP_01067305.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151425|ref|ZP_01069640.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153932|ref|ZP_01072135.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597453|ref|ZP_01100688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|153950943|ref|YP_001398644.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. doylei 269.97] gi|157414608|ref|YP_001481864.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81116] gi|205356039|ref|ZP_03222807.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218561970|ref|YP_002343749.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315123880|ref|YP_004065884.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|68053031|sp|Q5HWG0|RL25_CAMJR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153129|sp|Q9PII8|RL25_CAMJE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|166223672|sp|A7H564|RL25_CAMJD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|172047037|sp|A8FKA0|RL25_CAMJ8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57166166|gb|AAW34945.1| ribosomal protein L25 [Campylobacter jejuni RM1221] gi|85840431|gb|EAQ57688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841772|gb|EAQ59019.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94] gi|85842893|gb|EAQ60105.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190514|gb|EAQ94488.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359676|emb|CAL34462.1| putative 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|152938389|gb|ABS43130.1| ribosomal protein L25 [Campylobacter jejuni subsp. doylei 269.97] gi|157385572|gb|ABV51887.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81116] gi|205346163|gb|EDZ32798.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284925583|gb|ADC27935.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni IA3902] gi|307747248|gb|ADN90518.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni M1] gi|315017602|gb|ADT65695.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057732|gb|ADT72061.1| LSU ribosomal protein L25p [Campylobacter jejuni subsp. jejuni S3] gi|315928388|gb|EFV07702.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930528|gb|EFV09571.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 305] gi|315931612|gb|EFV10578.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni 327] Length = 178 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIT--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|325298380|ref|YP_004258297.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] gi|324317933|gb|ADY35824.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170] Length = 198 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD----PKPIALSAKDISKRLYSK 58 K ++ +R + GK + LRKN Q+P I+YG D P + R Sbjct: 1 MKSIDITGSLRTETGKKATHDLRKNNQVPCILYGMKKDENGNPAATPFAVTVEGLRNLVY 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 ++ L+I ++V+ I KD Q PV+D ++H DF Q++E + + + VPV+ + Sbjct: 61 TPHIYVVNLNIDGQVVNAIMKDIQFHPVTDAILHVDFYQINEENPIVMEVPVQLE--GLA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G+K GGKL + ++ + NNIP+ + +++ +L +G +I + ++ + ++ + Sbjct: 119 EGVKAGGKLALQVRKLKVKALYNNIPERLVINVTNLGLGKTIKVGELHF-DNLELLNAKD 177 Query: 179 ITIATI 184 + + Sbjct: 178 TVVCAV 183 >gi|224532913|ref|ZP_03673524.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] gi|224512151|gb|EEF82541.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi WI91-23] Length = 182 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSSVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|283955211|ref|ZP_06372712.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] gi|283793248|gb|EFC32016.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 414] Length = 178 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D + VPV+ + G+K G L Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKDVISKYMVPVKIT--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ + DI +P+ + + + + + Sbjct: 118 IQSKRRLKVKCTAENLPNFFELDVSKLDVGDALLVRDIVVPKGVTMIDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|328958225|ref|YP_004375611.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] gi|328674549|gb|AEB30595.1| 50S ribosomal protein L25 [Carnobacterium sp. 17-4] Length = 209 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K++A +R +VG +A R+ ++ A++ G + L +K++ L + Sbjct: 6 NMKVNATLRTEVGSSAANRARREKKVTAVVNGKGITSTAVLLDSKELDNVLKTLGKNAIF 65 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 E VI K+ Q + + ++ + + +G +TV VP+ +N + + Sbjct: 66 DVAVQDGETHQVIIKEIQNATLVNQILDVELQVIQKGEKLTVTVPINVLNADAV----KR 121 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G ++ +E+ + NIP TVD++ L+IGD++++ DI++ + + +S ++ ++ Sbjct: 122 GIVSQTLNELEIETLPANIPTEFTVDVSKLEIGDALYVSDIKVDKAITVLSDAEQSVVSV 181 Query: 185 VAPI 188 + P Sbjct: 182 LPPS 185 >gi|94984577|ref|YP_603941.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus geothermalis DSM 11300] gi|166223677|sp|Q1J162|RL25_DEIGD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|94554858|gb|ABF44772.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Deinococcus geothermalis DSM 11300] Length = 241 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A R K + G IPA+ Y N A+ K + + Sbjct: 1 MELKATPRKSQEKLAP------GMIPAVAY-NKEKNVTFAIERKAFDRAFRQQGTTGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + G E + K Q+D IHADF V+ G V V VPV KS G QGG Sbjct: 54 IVIEGGETFPALVKAVQMDKRRREAIHADFYMVTYGEPVEVSVPVHTT--GKSQGEIQGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++VV H ++++ P IP ITVD+ +L IGD + I+LPE + ++ + ++ Sbjct: 112 LVDVVVHSLNVIAPGPRRIPQEITVDVTNLNIGDHVTAGQIKLPEGVKLAVEPDLVVLSV 171 Query: 185 VAPI 188 + P Sbjct: 172 LPPR 175 >gi|283955736|ref|ZP_06373227.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] gi|283792691|gb|EFC31469.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336] Length = 178 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ DPV+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIT--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|303246471|ref|ZP_07332750.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] gi|302492181|gb|EFL52056.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio fructosovorans JJ] Length = 207 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 5/187 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK--- 58 ++ L+ R +GKG+ R LR +P I Y P+ + + K Sbjct: 1 MKETLSLAVTTRTGLGKGANRKLRAKDMVPGIYYDATGANVPVMVEHLPLQKLYAKTASS 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + + D G+E + + P + H DF V + VH+PV K+ Sbjct: 61 HVFDLKIATDAGEETKPSLMWKVEHHPTKPRITHVDFYGVDLTKAIHVHIPVVVT--GKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G +GG L V + ++C IPD + +D+ +L + +S+ + D+ LPE ++ + N Sbjct: 119 KGQVKGGALEVYRESIEVVCLPLAIPDRVVIDITNLDVNESVQVADLVLPEGVKAVYEDN 178 Query: 179 ITIATIV 185 ++ +V Sbjct: 179 FSLLAVV 185 >gi|68052993|sp|O51727|RL25_BORBU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC Length = 183 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 3/185 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MVENSRVLSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT- 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 60 DNTVLILDDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIG 117 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 118 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 177 Query: 181 IATIV 185 I+ Sbjct: 178 EVVII 182 >gi|111115620|ref|YP_710238.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia afzelii PKo] gi|122956313|sp|Q0SM66|RL25_BORAP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|110890894|gb|ABH02062.1| general stress protein [Borrelia afzelii PKo] Length = 182 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRF-LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + + ++P++ + S G Sbjct: 59 DNTVLILDDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLV--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVKLAESDDNL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|152990133|ref|YP_001355855.1| 50S ribosomal protein L25/general stress protein Ctc [Nitratiruptor sp. SB155-2] gi|166223697|sp|A6Q1Y9|RL25_NITSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|151421994|dbj|BAF69498.1| 50S ribosomal protein L25 [Nitratiruptor sp. SB155-2] Length = 178 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 4/170 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ GK + + LR++G + A IYG A D + + K + Sbjct: 2 LEGIVRESTGKKATKALRRDGYLIANIYGKDFPNIHAAFKKGDFIRTVRHKE--KLAFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ ++YQ DPV+ L+H D + G VP++ + G+K G L Sbjct: 60 KVGDKELEVVVQEYQKDPVTYDLLHVDLMVAQPGVVTYYMVPIKTV--GTPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + + NIPDSIT+D+++L +GD+I + DI LPE M+ Sbjct: 118 VTSKRRIKVKGAIENIPDSITLDVSNLDVGDAILIRDIELPEGVEHMTAP 167 >gi|257867045|ref|ZP_05646698.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257873380|ref|ZP_05653033.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] gi|257801101|gb|EEV30031.1| ribosomal protein L25 [Enterococcus casseliflavus EC30] gi|257807544|gb|EEV36366.1| ribosomal protein L25 [Enterococcus casseliflavus EC10] Length = 204 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ + + V+ + K+YQ D + L H +FL V V V I +S G+K G Sbjct: 61 ITISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|329943160|ref|ZP_08291934.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|332287742|ref|YP_004422643.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|313848313|emb|CBY17316.1| putative 50S ribosomal protein L25 [Chlamydophila psittaci RD1] gi|325506971|gb|ADZ18609.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC] gi|328814707|gb|EGF84697.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10] gi|328914996|gb|AEB55829.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila psittaci 6BC] Length = 185 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYQVTSYKVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI+LP ++ L + Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQLPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|161511075|ref|NP_212920.2| 50S ribosomal protein L25/general stress protein Ctc [Borrelia burgdorferi B31] Length = 182 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG D + + + + +K+ Sbjct: 1 MENSRV-LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G Sbjct: 59 DNTVLILDDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|289433566|ref|YP_003463438.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169810|emb|CBH26348.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 207 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ D L+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDTLVHVDLLAVDMNEEVETDVRVVLV--GNAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + + T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDVSSLEIGDVLTTNDLPENKDYVVQVEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|224531516|ref|ZP_03672148.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] gi|224510981|gb|EEF81387.1| ribosomal protein L25, Ctc-form [Borrelia valaisiana VS116] Length = 182 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRV-LSCEYRSSFGSSNARRIRAKYEIPAVVYGQGNDVSHLQIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L+ GK V KD + S ++ H DF +V + +VP++ S G Sbjct: 59 DNTVLILNDGKLERCVFVKDVAENIASKLIYHIDFYEVDRHVELERYVPIKLT--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 117 VKEGGILTVLKEQVKVKSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|2688715|gb|AAC67123.1| general stress protein (ctc) [Borrelia burgdorferi B31] Length = 214 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ T+L L Sbjct: 39 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT-DNTVLIL 97 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 98 DDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIGVKEGGIL 155 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 V+ +V + ++P+ I +DL + GDS+ ++D+ LP + N+ + I Sbjct: 156 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 213 >gi|257877122|ref|ZP_05656775.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] gi|257811288|gb|EEV40108.1| ribosomal protein L25 [Enterococcus casseliflavus EC20] Length = 204 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +T+ + + V+ + K+YQ D + L H +FL V V V I +S G+K G Sbjct: 61 ITISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|315301103|ref|ZP_07872397.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] gi|313630524|gb|EFR98363.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596] Length = 207 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTKLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 + + + ++V+ +YQ+DP+ DIL+H D L V V V V + +PG+K GG Sbjct: 62 AVTVDGKKLNVLLHEYQVDPLKDILVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + D+ + + T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQVEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|315453575|ref|YP_004073845.1| Ribosomal protein L25, ctc protein-like protein [Helicobacter felis ATCC 49179] gi|315132627|emb|CBY83255.1| Ribosomal protein L25, ctc protein homolog [Helicobacter felis ATCC 49179] Length = 178 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R K+ K + LRK G + A +YG+ D + L K T + Sbjct: 2 LEGQVRAKLSKSERKTLRKEGYLLANLYGHNVPNVYATFHTNDFIRFLKHK--PTLDFQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G++ V+ ++YQ DPVS+ L+H D L ++ G+ HVPV+ G+K G L Sbjct: 60 KVGEKAYQVVVQNYQKDPVSNALMHVDLLVLNTGAVSKFHVPVKV--HGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + V + C ++ S +D++ L +GD I + D+++P + N + ++ Sbjct: 118 MISKSRVQVACKPEDLISSFELDVSSLDVGDVILVRDLKVPASVKILENPNNAVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|116332055|ref|YP_801773.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280213|sp|Q04Q05|RL25_LEPBJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116125744|gb|ABJ77015.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 212 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R + GK LR +G IP I G A++ K+++K ++S Sbjct: 1 MSQSTIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGV-ATSGAVNEKELAKMVHSGI 59 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ G+ V K+ Q P D + H DF +V G + + + K Sbjct: 60 RQSTLIELDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGVAK- 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 119 -GSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPASWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|239941864|ref|ZP_04693801.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|239988326|ref|ZP_04708990.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 11379] gi|291445312|ref|ZP_06584702.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] gi|291348259|gb|EFE75163.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces roseosporus NRRL 15998] Length = 196 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 7/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E KL+ +R + GKG+AR +R+ ++P ++YG+ ++P + L ++ L + N Sbjct: 1 MAEIKLATEVRTEFGKGAARRVRRADRVPGVVYGHGAEPVHVTLPGHELLLALRTAN--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+I + VIPK Q P+ + H D L V G V V + V + Sbjct: 58 VLIGLEIDGKDALVIPKAVQRHPLKGTIEHVDLLTVKRGEKVEVEIAVHAEGDLAPGA-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 L V + + + A +IP+S+TV + L G SI +DI LP+ + + + Sbjct: 116 --NLLEFVQNTLLVEAEATHIPESVTVSVAGLDAGASIVAKDIPLPKGSVLAGDEDAIVI 173 Query: 183 TIV 185 +V Sbjct: 174 QVV 176 >gi|216263570|ref|ZP_03435565.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] gi|215980414|gb|EEC21235.1| ribosomal protein L25, Ctc-form [Borrelia afzelii ACA-1] Length = 182 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M+ LS R G +AR +R +IPA++YG +D + + + + +K+ Sbjct: 1 MENSRV-LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKIKSSEFNKKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L LD GK V KD + S ++ H DF +V + + ++P++ + S G Sbjct: 59 DNTVLILDDGKVERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLV--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP + Sbjct: 117 VKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVKLAESDDNL 176 Query: 181 IATIV 185 I+ Sbjct: 177 EVVII 181 >gi|326803940|ref|YP_004321758.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] gi|326650944|gb|AEA01127.1| ribosomal protein L25, Ctc-form [Aerococcus urinae ACS-120-V-Col10a] Length = 210 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A RD G +++ LR+ +P ++Y + DP I++ D+ K + Sbjct: 2 MKFVAKTRDAAGTSASKALRREDLVPGVVYASDLDPIKISMERPDVEKIERDLGTNSVFE 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G+ V ++ + I+ + + +G + V+VPV + E K G Sbjct: 62 LEIEGQGSRTVFLREISRAAIKPIVYNISLQAIKKGEKLEVNVPVSIVGEEKLA--NPAG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 + +EV+L P+ TVD++ L I DS+ +++ E ++ I + Sbjct: 120 VAAINVYEVTLRIDPAKAPEYFTVDVSGLDINDSVTAGEVKFEGMEDAELITDPEEVIVS 179 Query: 184 IV 185 + Sbjct: 180 VS 181 >gi|157736889|ref|YP_001489572.1| 50S ribosomal protein L25/general stress protein Ctc [Arcobacter butzleri RM4018] gi|166987889|sp|A8ESH9|RL25_ARCB4 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|157698743|gb|ABV66903.1| 50S ribosomal protein L25 [Arcobacter butzleri RM4018] Length = 178 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K + + LR+ G + A IYG + A + K L N T + Sbjct: 2 LEGIIRDSMTKQATKTLRREGYLIANIYGKGLENVAAAFKKNEFIKFLR--NKETLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++ V+ K+YQ P++ L+H D + G + +PV+ + K G+K G L Sbjct: 60 KLGGNVLKVVVKEYQKCPLTSELLHVDLMVAQAGVRTSYSIPVKAVGTAK--GLKNKGLL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + + N+P+ I +D+ +L GD+I + DI+ P + + ++ Sbjct: 118 MVHTRRIPVKSTIENLPNEIVLDVTNLDTGDNILIRDIQFPANVDCYLDPRVPVVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|297183229|gb|ADI19369.1| ribosomal protein l25 (general stress protein ctc) [uncultured Chloroflexi bacterium HF0500_03M05] Length = 219 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 4/188 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM- 61 L R+ GK + LR+ G +P +G + + + + A+ + + + S Sbjct: 1 MDTLNLKLSPREVKGKK-VKRLRQAGVVPVHFFGGDIESQALQVEARVLRRLVKSAGTNI 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ ++ Q PV++ L+H DFL+V TVT +VP+ + + Sbjct: 60 PITVEVEGQDGENICFIREVQRHPVTEDLLHVDFLRVDVSQTVTANVPIIL-DGSAPAVE 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD-SIHMEDIRLPEKTSSMSQLNIT 180 GG L + + NIP +I VD++DL + SI + D+++ + ++ L Sbjct: 119 NSGGTLIQPLQTLVVESLPMNIPAAIHVDVSDLDDFEKSIRVRDVQVSSGVTLLADLGEM 178 Query: 181 IATIVAPI 188 I ++ P Sbjct: 179 ITRVLPPR 186 >gi|222824358|ref|YP_002575932.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] gi|254801040|sp|B9KDP2|RL25_CAMLR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|222539579|gb|ACM64680.1| 50S ribosomal protein L25 [Campylobacter lari RM2100] Length = 178 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKINEFIKEVRKKT--TLAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G ++++V+ DYQ DPV+ L H D +G VPV+ + + G+K G L Sbjct: 60 KVGGKVLNVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKIV--GTAMGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D+ L +GD++ + D+ +PE + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNYFELDVTKLDVGDALLVRDVVVPEGVTMVDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|302387238|ref|YP_003823060.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] gi|302197866|gb|ADL05437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium saccharolyticum WM1] Length = 196 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 2/177 (1%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLD 68 + +R KG L++ G + I G D IA+ + + + Sbjct: 8 NVELRKSTRKGDNNQLKREGYLLGNIAGKGVDSISIAVKKDVFRRSMKEFGRNGVFKLVV 67 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 + V+ K+ ++PV + + H DF VS + V ++F + +N Sbjct: 68 PDGQSYTVMAKEIHIEPVKNEISHLDFQMVSFSEKIKQEVAIKFTGAELLESKRLL--IN 125 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + L +IPD I +D+++++ G+SI DI+LPE +S + T+V Sbjct: 126 STIDSILLEGLPQDIPDEIEIDVSNMEAGESIQFSDIKLPEGLTSTIDPEQKMITVV 182 >gi|116327330|ref|YP_797050.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284866|sp|Q054X8|RL25_LEPBL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|116120074|gb|ABJ78117.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 212 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R + GK LR +G IP I G A++ K+++K ++S Sbjct: 1 MSQSTIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGV-ATSGAVNEKELAKMVHSGI 59 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ G+ V K+ Q P D + H DF +V G + + + K Sbjct: 60 RQSTLIELDVEGQGQQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGVAK- 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 119 -GSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPASWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|121612154|ref|YP_001000021.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|148927012|ref|ZP_01810688.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] gi|167004979|ref|ZP_02270737.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter jejuni subsp. jejuni 81-176] gi|166223673|sp|A1VY30|RL25_CAMJJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|87250228|gb|EAQ73186.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81-176] gi|145844420|gb|EDK21529.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 178 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +G+ +A+ L+++G + A IYG + A + K + K T I + Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEFIKEVRKKT--TLIFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + + V+ DYQ D V+ L H D +G VPV+ + G+K G L Sbjct: 60 KVGSQTLSVVVVDYQKDSVTAELKHVDLKVAQKGVISKYMVPVKIT--GTAIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + C A N+P+ +D++ L +GD++ + DI +P + + + + + Sbjct: 118 IQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTMIDADRVAVVGVEKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|313902507|ref|ZP_07835908.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] gi|313467193|gb|EFR62706.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermaerobacter subterraneus DSM 13965] Length = 210 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 10/184 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK---RLYSKNFMTTI 64 L AV R+ G AR +R+ G +PA++YG P+ L A++ + ++ +T Sbjct: 5 LRAVPREP---GHARRVRREGGLPAVLYGPSG-NFPVRLDAREFHRLLASGRARGILTVE 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 L D + + K+ Q P L+H D +V E V VP+ ++ + Sbjct: 61 LVQDGSTRSLSAMVKELQYHPARGDLLHVDLFEVREDEPVRAEVPIVLRGVEEAE---KR 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L E+ + ++P ++ D+ L +G+ + + D+ +P + ++ + +A + Sbjct: 118 GILQHQLAELEIESLPRHMPAAVEGDVARLPVGEELRVRDLEVPAQVRVLNDPDEIVAVL 177 Query: 185 VAPI 188 + P Sbjct: 178 LPPK 181 >gi|301092281|ref|XP_002996999.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] gi|262112188|gb|EEY70240.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4] Length = 251 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 9/189 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP------KPIALSAKDISKRLYSKNFM 61 L V+R+ G ++R LRK G +P ++YG + + A + R + Sbjct: 33 LQLVVREGEGSRASRRLRKKGLLPGVLYGEGEEGKDERMLVSLPTRAFEREHRKLWTSIE 92 Query: 62 TTILTLDIGKELV-HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + + +G +D QLDPV+D+ + +FL+ G TV +P+ ++NE SPG Sbjct: 93 NQVFHVQVGDHPPVKAYMRDVQLDPVTDVPLAVNFLRFKPG--RTVSIPITYLNEEGSPG 150 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG +N + H + + IP ++ +D+N L +GD +++E I+ PE Sbjct: 151 LKRGGFINHIHHSLDCTIFTDKIPITLQIDVNGLHVGDKVYLESIKFPEGVVPNIPEGSL 210 Query: 181 IATIVAPIS 189 +A I Sbjct: 211 VAKIAGRRG 219 >gi|325568384|ref|ZP_08144751.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] gi|325158153|gb|EGC70306.1| 50S ribosomal protein L25 [Enterococcus casseliflavus ATCC 12755] Length = 204 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G++PAI+ G + PIA++A ++ K L +N + T+ Sbjct: 2 SVSLEVTKREVRPRSLRNKLRHEGKVPAIVNGYKVESTPIAVNAAELEKILR-ENGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + V+ + K+YQ D + L H +FL V V V I +S G+K G Sbjct: 61 IMISLEGKKVNTLIKEYQSDTFTRNLTHVEFLSVDMNEETEVEAEVTLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+ + +D+ L+IGDS+ + D+ ++ + ++ I + Sbjct: 119 GVLAQNLYTVVVSATPDKLPERVEIDVTSLEIGDSLTVADLPKNDEYTIVTDPEEQIVAV 178 Query: 185 VAP 187 P Sbjct: 179 TEP 181 >gi|38233497|ref|NP_939264.1| 50S ribosomal protein L25/general stress protein Ctc [Corynebacterium diphtheriae NCTC 13129] gi|71153137|sp|Q6NI77|RL25_CORDI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|38199757|emb|CAE49417.1| Putative 50S ribosomal protein L25 [Corynebacterium diphtheriae] Length = 205 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 ++A R++ GKG AR LR GQ+P +IYG + P +++ ++ L + + I Sbjct: 5 TTIAAQPRNEFGKGFARRLRVAGQVPGVIYGVDVEAPIHFSINRLELHAVLR-AHGVNAI 63 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E + K + ++ H D L + G V V VPV +PG Sbjct: 64 IELDIEGEKHLTMIKHVDQNVLTLNADHVDLLAIKRGEKVEVEVPVVLTG-ETAPGTTLV 122 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +VV E +L +IP+ IT + L + + D+ +P TS ++ IA++ Sbjct: 123 QDADVVLVEADVL----SIPEEITFSVEGLDVDSKVLAGDLAMPANTSLVADAETVIASV 178 >gi|307324318|ref|ZP_07603526.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] gi|306890049|gb|EFN21027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Streptomyces violaceusniger Tu 4113] Length = 199 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+SA R + GKG+AR R ++P ++YG+ DP + L A D+ L + N Sbjct: 1 MAEVKISAKPRTEFGKGAARRTRAANRVPGVVYGHGVDPLHVTLPAHDLLMALKTPNV-L 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVS-DILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + ++ GK+ VIPK Q P+ +L H D L V +G VTV VP+ + G Sbjct: 60 LRVKVEGGKDE-LVIPKAVQRHPIKIGVLEHVDLLLVKKGEKVTVEVPILTEGDLAPGG- 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 L + + + + A +IP+S+TV + L G +IH +DI LP T+ + + + Sbjct: 118 ---NLLEHLLNALPVETEATHIPESVTVSIAGLDAGATIHAKDITLPAGTTLAVEEDAAV 174 Query: 182 ATIV 185 +V Sbjct: 175 LQVV 178 >gi|24216520|ref|NP_714001.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45656329|ref|YP_000415.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|71153147|sp|Q72V72|RL25_LEPIC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|71153148|sp|Q8EZN1|RL25_LEPIN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|24197831|gb|AAN51019.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str. 56601] gi|45599563|gb|AAS69052.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 212 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 1 MDQKEC-KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M Q K++ R GK LR +G +P I G A++ K++ K ++S Sbjct: 1 MSQNTIHKIAVKKRTTTGKNENNRLRSSGMVPVNIIGGGV-ATSGAVNEKELEKMVHSGI 59 Query: 60 FMTTILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 +T++ LD+ G+ V K+ Q P D + H DF +V G + + + K Sbjct: 60 RQSTLIELDVEGQGAQKVFVKEIQRFPEIDRIRHVDFYKVVPGQKIVTKIGIETTGIAK- 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G K GG+ + HE+ + ++ +++T+D+ DL +GDSI + +++P + + Sbjct: 119 -GSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKISQLKVPTSWEILINGD 177 Query: 179 ITIATI 184 + ++ Sbjct: 178 PIVTSV 183 >gi|330443834|ref|YP_004376820.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] gi|328806944|gb|AEB41117.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila pecorum E58] Length = 185 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y + I + A K L S + Sbjct: 1 MELVVTRRETGKKSFLKKIRQTGGIPAVVYSSGKSIANITVDALVFKKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ L+ ++ + KD Q + + H DF ++ E V + +PVR +N G+K Sbjct: 61 TVFFLEYEGRVIKALVKDIQYQVTTYEVSHLDFEELVENRPVKLSIPVRCVNTVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +PE +S L Sbjct: 121 LGGSLRQVIRAIRVVCLPKDIVPFLELDVQSLGLSQTRKLSDIVIPEGIKPISSLREVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|89898001|ref|YP_515111.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila felis Fe/C-56] gi|109893353|sp|Q255S2|RL25_CHLFF RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89331373|dbj|BAE80966.1| 50S ribosomal protein L25 [Chlamydophila felis Fe/C-56] Length = 185 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSVANIVVDAHVFSKFLSGLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRIIRALVKDIQYQVTTYQVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +P ++ L + Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPFLELDVRSLGLSQTRKLSDINIPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|262341258|ref|YP_003284113.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272595|gb|ACY40503.1| 50S ribosomal protein L25 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 211 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K + R+ VGK + R +R +G+IP I+YG P S + + K +Y+ Sbjct: 1 MKYVNIYGQKRN-VGKKAVRSIRLSGKIPCILYGKNI-NIPFLTSLESLKKIVYTTEVYG 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ ++ + ++ + K+ Q DP+SD ++H DF Q+ E + + +PV I + G+ Sbjct: 59 VIVQIEGYNKNINAVQKEIQFDPISDKILHVDFFQIDESKPLVLEIPV--IPFGRPIGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG+ ++ + +NIP+ I ++++ L IGD I +ED+ + ++ + IA Sbjct: 117 KGGEYYSPIRKLKIKAFPSNIPEYIKLNISSLDIGDRITVEDLYQDQYV-ILNPSHTLIA 175 Query: 183 TI 184 + Sbjct: 176 RV 177 >gi|42524123|ref|NP_969503.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] gi|71153121|sp|Q6MJR4|RL25_BDEBA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|39576331|emb|CAE80496.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100] Length = 212 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Query: 3 QKE-CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL--YSKN 59 K L+ R+ GK ++R LR + +PA+IYG P +++ K+I K +N Sbjct: 1 MKTRIDLTVEPRE-TGKHNSRGLRTSRNVPAVIYGA-VTPTNVSVGEKEIVKYNTRAYEN 58 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 + + + D + V+ K + P++ H DF + V V+V VR K+ Sbjct: 59 ALFNLKSSDKTANGIVVLIKSVDVHPLTRRPQHVDFFALDLKKAVRVNVEVRLE--GKAI 116 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 G+ +GG LNVV V + C IP+ T D+++L +GD++H+ DI++ ++ Sbjct: 117 GLSEGGLLNVVLRSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKVSGSVKMITGAEQ 176 Query: 180 TIATIVA 186 TIA + A Sbjct: 177 TIAVVNA 183 >gi|73663564|ref|YP_302345.1| 50S ribosomal protein L25/general stress protein Ctc [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581585|sp|Q49V10|RL25_STAS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|72496079|dbj|BAE19400.1| 50S ribosomal protein L25 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 220 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 4/176 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + LR G++PAI+YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSDLKTLRNTGKVPAIVYGYGTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV+ + ++ G K+GG Sbjct: 62 ELGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVQLV--GEAVGTKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + +NIP+SI VD+++L+I DS+ +EDI++ + ++ + +I Sbjct: 120 VVEQPLFNLEVTATPDNIPESIEVDISELEINDSLSVEDIKVSGDFTIENEASDSI 175 >gi|269838096|ref|YP_003320324.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] gi|269787359|gb|ACZ39502.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphaerobacter thermophilus DSM 20745] Length = 218 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 7/174 (4%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 +L A R +GK R LR+ G +P +IYG + P+P+A+ K+ + + TT++ Sbjct: 6 QLQAQQRAVLGKK-VRQLRRQGLLPGVIYGPAVETPRPVAIDGKEFDRLYRNV-GPTTLV 63 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ V + D + L+H DF + V V + + G Sbjct: 64 DLDLDGTTHTVFIRGVDRDSLGKELLHVDFYAPNLNEPTVVSVAINVVG---ELPASVDG 120 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLN 178 L +V + NIP I VD++ L +IH+ D+++PE ++ + Sbjct: 121 VLTYGRQDVEIRALPENIPSQIEVDISGLTNENRAIHVSDLQVPEGCEILTPGD 174 >gi|261416824|ref|YP_003250507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373280|gb|ACX76025.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326515|gb|ADL25716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 207 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 3/184 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + L A R LRK GQIPA+ YG + K I++S D+ K + Sbjct: 1 MELTTLKAASRVLGANRDNARLRKAGQIPAVYYGKGIEAKNISVSEIDLRKV-LAPGKRY 59 Query: 63 TILTLDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+L L+I GK + Q D ++ + H DF+++++ V V +PV+ Sbjct: 60 TLLDLEIDGKAGNPALVYSVQKDALTQKITHVDFIKIADDEFVKVRIPVKLSGLPVGVKT 119 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 QGG + + L +IP + +D+++ + + + +D +LPE + S I Sbjct: 120 -QGGLFSQEARYLMLAAKPASIPSVLELDISNFETNVTFYAKDFKLPENVTLASGPRTVI 178 Query: 182 ATIV 185 TI Sbjct: 179 FTIS 182 >gi|255023564|ref|ZP_05295550.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL J1-208] gi|313611269|gb|EFR86036.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes FSL F2-208] Length = 207 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 3/184 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L + H+V + +P++I +D++ L+IGD + ++ + + T+ T+ Sbjct: 120 VLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNNLPENKDYVVQVEEEETVVTVS 179 Query: 186 APIS 189 AP + Sbjct: 180 APRA 183 >gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus saanensis SP1PR4] Length = 233 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 3/180 (1%) Query: 8 LSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 ++AV R K K AR +R +G IPA++YG D + + K I++ L+S++ TI Sbjct: 9 IAAVPRTGKFNKNHARRVRVSGLIPAVVYGAGQDSVAVTVDPKAITRILHSESGHNTIFD 68 Query: 67 LDI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + G +V + D+Q +P+ L+H DF +++ + V VPV GG Sbjct: 69 LSVEGTGVVKAMIVDWQYEPIKGKLLHIDFKRIAMDKAMRVSVPVMLTGVPVGV-KNSGG 127 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 L+ + EV + C +IP I VD+ L++ +IH+ D+ K + + +A + Sbjct: 128 ILDQILREVQIECLPGDIPSHIDVDVAGLELYGAIHVADLPHGGKIKFLEEETALVAHVT 187 >gi|15805454|ref|NP_294150.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus radiodurans R1] gi|28948939|pdb|1NKW|T Chain T, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans gi|51247392|pdb|1SM1|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin gi|66361038|pdb|1YL3|V Chain V, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4. gi|88192275|pdb|2B66|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400 gi|88192338|pdb|2B9N|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf2, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400. gi|88192393|pdb|2B9P|Z Chain Z, 50s Ribosomal Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site. This File Contains The 50s Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site And Is Described In Remark 400. gi|6458107|gb|AAF10004.1|AE001902_4 general stress protein Ctc, putative [Deinococcus radiodurans R1] Length = 253 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 10/188 (5%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 D +L+A R K I A+ Y N + AL K + ++ Sbjct: 13 DTATMELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQSTT 65 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 G E + K Q+D IH DF V+ G V V VPV +S G Sbjct: 66 GLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTT--GRSQGE 123 Query: 122 KQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 QGG +++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T Sbjct: 124 VQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELT 183 Query: 181 IATIVAPI 188 + +++ P Sbjct: 184 VVSVLPPR 191 >gi|260906161|ref|ZP_05914483.1| 50S ribosomal protein L25P [Brevibacterium linens BL2] Length = 213 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + KL A R + GKG+AR R+ G+IPA++YG+ DP I++ L N + Sbjct: 1 MADFKLIAEPRTEFGKGAARRTRRAGRIPAVVYGHGGDPVHISIDGHATMMALKHANALF 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + G + V I +D Q D V+ + H D + V G V V VPV I E+ Sbjct: 61 -EIESTDGAKNVLAIARDVQTDAVTREIEHLDLIIVKRGEKVEVDVPVHLIGESAP---- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 G + + + A +P+ I V ++ G+ + I L + + + Sbjct: 116 -GTMVQQEESTILIKADATKLPEYIEVTIDGRAAGEHVLAGQIELASGIELAADPEMLVV 174 Query: 183 TIV 185 + Sbjct: 175 NVS 177 >gi|167561485|ref|ZP_02354401.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis EO147] gi|167568715|ref|ZP_02361589.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia oklahomensis C6786] Length = 167 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF +V Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C +P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSSMSQ---LNITIATIVAPISG 190 +DI LP + ++ N +A+ P Sbjct: 121 AKDIALPNGVALVAHVDAENPVVASATIPAGA 152 >gi|203284680|ref|YP_002222420.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|203288213|ref|YP_002223228.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] gi|226736283|sp|B5RMX8|RL25_BORDL RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226736286|sp|B5RQC3|RL25_BORRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|201084123|gb|ACH93714.1| 50S ribosomal protein L25, general stress protein [Borrelia duttonii Ly] gi|201085433|gb|ACH95007.1| 50S ribosomal protein L25, general stress protein [Borrelia recurrentis A1] Length = 182 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 4/175 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R K G AR+LR +IPA++YG SD I +++ + K+ T+L L Sbjct: 7 LKYEGRSKFGSSCARILRAKSEIPAVVYGKESDVLHIKINSNEFDKKFAKFT-DNTVLLL 65 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + G V KD + + H DF +V + + ++FI S G+K+GG L Sbjct: 66 NDGMVEKCVFIKDVSENLTKKFIYHIDFYEVDRTREIERDISIKFI--GASVGVKEGGTL 123 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNITI 181 +V+ + V + N+P+ + VDL +K GD I ++DI L + + N+ + Sbjct: 124 SVLRNTVKVKALPLNLPEFVEVDLTPVKKGDQITLKDIVLSDNVKLSETDENLAV 178 >gi|255971277|ref|ZP_05421863.1| ribosomal protein L25 [Enterococcus faecalis T1] gi|255962295|gb|EET94771.1| ribosomal protein L25 [Enterococcus faecalis T1] Length = 202 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L R + LR G++PAI+YG + PI KD+SK L ++ + T+ Sbjct: 2 SVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILR-EHGVNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + + + + ++ + QLD + ++H +FL V+ T V V+ I +S G+K G Sbjct: 61 IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLI--GESAGVKAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V + + +P+SI VD+ +L+IGD++ + + + ++ + I Sbjct: 119 GTLAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIAHLPEHKDYEILTDPEEQLVAI 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|242309277|ref|ZP_04808432.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] gi|239524318|gb|EEQ64184.1| 50S ribosomal protein L25 [Helicobacter pullorum MIT 98-5489] Length = 178 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + N I + Sbjct: 2 LSGIIRESISKADTKSLRKNGYLIANIYGKGRENIHCAFKRNDFIREVK--NKTDLIFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + G V VR + K G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQNGVEAKYSVKVRIVGIAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + + +P +++ DL +GD + + D+ E + + ++ I ++ Sbjct: 118 MVSKKRIKVKAAPEKLPKDYEINVTDLDVGDVVLVRDLPQNEGVKIVERDDVAIVGVIKS 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|255527375|ref|ZP_05394251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296185632|ref|ZP_06854041.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] gi|255508947|gb|EET85311.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium carboxidivorans P7] gi|296049760|gb|EFG89185.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7] Length = 195 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---MSDPKPIALSAKDISKRLYSKN 59 ++ L+A R K K R+ G IPA+IYG+ S+P K ++ +K+ Sbjct: 1 MEQIILNAEKRTKETKKF----REEGFIPAVIYGDCVAKSEPVKF---EKMPLMKILAKH 53 Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 L + G + K+ Q PVS+ +IH D VS+ V V VP+ F E Sbjct: 54 GSNVKLWIKRGDDKKFGFIKEIQRHPVSNKIIHLDVQLVSKDHEVKVQVPITFNGEEALA 113 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI 179 K +L + EV +L + IP+ I ++++ GDSI ++D+ L ++ + N Sbjct: 114 --KNQLQLQIQKPEVDVLGKIDLIPEVIHINVSGKNAGDSITLKDLNLDKQLKIHDKENE 171 Query: 180 TIATIV 185 ATI Sbjct: 172 IYATIT 177 >gi|34558363|ref|NP_908178.1| 50S ribosomal protein L25/general stress protein Ctc [Wolinella succinogenes DSM 1740] gi|71153675|sp|Q7M7U7|RL25_WOLSU RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|34484082|emb|CAE11078.1| PUTATIVE 50S RIBOSOMAL PROTEIN L25 [Wolinella succinogenes] Length = 178 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K + + LR +G + A IYG + A D + + SK I + Sbjct: 2 LEGIIRESISKSAVKALRNDGYLIANIYGKGQENTHCAFKKNDFIRAVKSKT--NIIFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQ DP++ L+H D + V G VPV+ K G+K G L Sbjct: 60 KVGGKEINVVVQEYQKDPITSDLLHVDLMLVQPGVETKFLVPVKTAGSAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + V + C N+P S +D++DL +GD+I + D+ + + ++ I ++ Sbjct: 118 ILSKKRVKVKCSPENLPASYELDVSDLDVGDAILVRDLPELPNVKVIEKESVAIVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|37519968|ref|NP_923345.1| 50S ribosomal protein L25/general stress protein Ctc [Gloeobacter violaceus PCC 7421] gi|68053196|sp|Q7NNL2|RL25_GLOVI RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|35210960|dbj|BAC88340.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421] Length = 211 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 6/190 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 L+ R R +R+ G+IPA++YG+ + + L + L T Sbjct: 2 TIPLTLKQRATG--AQPRAMRREGRIPAVLYGHRGTQSLALELEQRTAEDLLKRVTINNT 59 Query: 64 ILTLDIGK-ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 IL L + + V+ ++ Q D V L+H F V+ ++T+ +P+ F Sbjct: 60 ILPLKVERGWSGDVLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPLVFTG-EAVGVKM 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V ++++ P ++P++I VD++ +++GD ++++D+ LP ++ ++ +A Sbjct: 119 DGGLLEKVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLPPGIEVVNTPDLVVA 178 Query: 183 TIVA-PISGS 191 + P + Sbjct: 179 HLTPSPTGRA 188 >gi|300088474|ref|YP_003758996.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528207|gb|ADJ26675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 217 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 3/184 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 ++ L+ R+ GK R LR+ G P IYG+ + + + + + + Sbjct: 1 MEKISLAVARRETTGKK-NRFLRRAGVTPCHIYGHSIASETVQADTAALEQVIATAGSSR 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + GK+ ++ Q PV + ++H DF QV + +P+ + Sbjct: 60 LVSLEFKGKKPRMAFVREVQRPPVGNSILHVDFYQVKMTEKIAARIPLHLTG-ESAALKA 118 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITI 181 +G L + + NIP S+TVD++ L+ + D+I++ D+ L + + ++ + Sbjct: 119 KGRYLTNPIDHIEVESLPANIPASVTVDISVLETLDDAIYVSDLGLDKSVTLLTDPETLV 178 Query: 182 ATIV 185 A I Sbjct: 179 AKIA 182 >gi|255086031|ref|XP_002508982.1| predicted protein [Micromonas sp. RCC299] gi|226524260|gb|ACO70240.1| predicted protein [Micromonas sp. RCC299] Length = 226 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 7/186 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN-----F 60 + + R GK + LR++G +P +++G + + + +D+ + + Sbjct: 37 NIDVMPRTGTGKTVTKRLRRDGLVPGVLFGPGDQTGELLQMPKQDVERLVRIYGLSGIGA 96 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 L G V+ K D + + + +F+ + V V VPVR ++ PG Sbjct: 97 RILTLNFPDGVRKQDVLAKQVIYDATNINVENVNFMPCGPETEVKVKVPVRVEGDDACPG 156 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNI 179 IK+GG + +++ C +IP I +++ + +GD + + D+ +PE M+ + Sbjct: 157 IKKGGFAWKLHKTLTVTCKGKDIPSEIVSNISAMDVGDKVFLRDLDIPEGVRVHMTDDKV 216 Query: 180 TIATIV 185 I I Sbjct: 217 PIIKIA 222 >gi|322807531|emb|CBZ05106.1| LSU ribosomal protein L25p [Clostridium botulinum H04402 065] Length = 189 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 L+A++R+K GK RK G P IIYG + I + + S Y +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMK-ESIKVKFEVPSLLRYLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I + + + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVISVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|226355167|ref|YP_002784907.1| 50S ribosomal protein L25/general stress protein Ctc [Deinococcus deserti VCD115] gi|259646682|sp|C1CZB5|RL25_DEIDV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|226317157|gb|ACO45153.1| putative 50S ribosomal protein L25 (General stress protein CTC) [Deinococcus deserti VCD115] Length = 239 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K + G IPA+ Y N + AL K + ++ Sbjct: 1 MELNAKPRKSQEKLA------EGLIPAVAY-NKDNNISFALDRKAFDRAFRQQSTTGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E + K Q+D IH DF V+ G + V VPV KS G GG Sbjct: 54 ITVEGGETFPALVKTVQMDKRRRTPIHVDFYMVTYGEPIEVSVPVHTT--GKSQGEIMGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++V H +S++ P IP +TVD++ L IGD I D++LPE + + + ++ Sbjct: 112 LVDIVLHNLSIVAPGPRRIPQELTVDVSRLNIGDHITAGDVKLPEGCTLAVAADSVVISV 171 Query: 185 VAPI 188 + P Sbjct: 172 LPPR 175 >gi|148381166|ref|YP_001255707.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153932176|ref|YP_001385541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153937600|ref|YP_001388947.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|168179133|ref|ZP_02613797.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|168183534|ref|ZP_02618198.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226950645|ref|YP_002805736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|237796673|ref|YP_002864225.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] gi|148290650|emb|CAL84779.1| putative ribosomal L25p family protein [Clostridium botulinum A str. ATCC 3502] gi|152928220|gb|ABS33720.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152933514|gb|ABS39013.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] gi|182670001|gb|EDT81977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|182673333|gb|EDT85294.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|226844221|gb|ACO86887.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] gi|229260688|gb|ACQ51721.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 189 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 L+A++R+K GK RK G P IIYG + I + + S Y +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMK-ESIKVKFEVPSLLRYLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I V + + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVVSVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|237752463|ref|ZP_04582943.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] gi|229375952|gb|EEO26043.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter winghamensis ATCC BAA-430] Length = 178 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + K I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGKENLHCAFKRNDFIREVKKKT--DLIFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ +IH D + +G V VR I K G+K G L Sbjct: 60 EVGSQKYPVVIQEYQKDPITSEIIHVDLMLAQKGIEAKYSVKVRTIGTPK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + + N+P ++++DL +GD + + D+ + + ++ I ++ Sbjct: 118 MMSKKRIKVKAAPENLPKDYEINVSDLDVGDVVLVRDLPAFNGVKIVERDDVAIVGVIKS 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|237751112|ref|ZP_04581592.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] gi|229373557|gb|EEO23948.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter bilis ATCC 43879] Length = 178 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +RD +GK +A+ L+++G + A IYG + A D K + +K + + + Sbjct: 2 LEGKLRDSIGKTNAKALKRDGYLVANIYGKGKENIHCAFKRNDFIKYMRAKQTLIFPVKI 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D V+ ++YQ DPV+ ++H D + ++G VPV+ G+K G L Sbjct: 62 DGNV--YDVVVQEYQKDPVTSDILHVDMMFATKGCVAKYKVPVKVT--GSPIGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V++ C A +P+ T+D++ L +G +I + D+ S + + ++ I ++ Sbjct: 118 VFSRKRVAVKCDAAVLPNDYTLDVSGLDVGHAILVRDLPEIAGVSVIEKPSVAIVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|29349997|ref|NP_813500.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides thetaiotaomicron VPI-5482] gi|253572757|ref|ZP_04850157.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298384351|ref|ZP_06993911.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] gi|71153118|sp|Q89YZ1|RL25_BACTN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29341908|gb|AAO79694.1| putative 50S ribosomal protein L25 [Bacteroides thetaiotaomicron VPI-5482] gi|251837657|gb|EES65748.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 1_1_6] gi|298262630|gb|EFI05494.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 1_1_14] Length = 196 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + ++ + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGAG-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ LDI + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLDIDGKKVNAILKDIQFHPVKDNILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|269302741|gb|ACZ32841.1| ribosomal protein L25, Ctc-form [Chlamydophila pneumoniae LPCoLN] Length = 185 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVQSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|289551700|ref|YP_003472604.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315660332|ref|ZP_07913185.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] gi|289181231|gb|ADC88476.1| LSU ribosomal protein L25p [Staphylococcus lugdunensis HKU09-01] gi|315494621|gb|EFU82963.1| 50S ribosomal protein L25 [Staphylococcus lugdunensis M23590] Length = 216 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 4/177 (2%) Query: 7 KLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L +++R K + + +R G++PA++YG + + + + K + ++ Sbjct: 3 SLKSIIRQGKQTRSELKKIRSLGKVPAVVYGYSTKNTSVKVDEVEFIKVIREV-GRNGVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L +G + + V+ DYQ DP+ + + H DFL ++ TV VPV + ++ G K+GG Sbjct: 62 DLGVGSKSIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVEVPVHLV--GEAVGAKEGG 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + + NIP++I VD+ DL+I DS + D+++ + + +I Sbjct: 120 VVEQPLFYLQVTATPENIPEAIEVDVTDLQINDSYTVADVKVTGDYTIEDEPETSIV 176 >gi|170758871|ref|YP_001788537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169405860|gb|ACA54271.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 189 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 L+A++R+K GK RK G P IIYG + + + K +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMKESMKVKFEVPSLLK-YLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I V++ + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVVNVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|52078547|ref|YP_077338.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|52783909|ref|YP_089738.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus licheniformis ATCC 14580] gi|319648576|ref|ZP_08002790.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] gi|68053089|sp|Q65PG9|RL25_BACLD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52001758|gb|AAU21700.1| general stress protein [Bacillus licheniformis ATCC 14580] gi|52346411|gb|AAU39045.1| Ctc [Bacillus licheniformis ATCC 14580] gi|317389343|gb|EFV70156.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2] Length = 208 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVS 87 G +P +IYG + K +AL + ++ K L TI+ LDI + V+ + Q DP+ Sbjct: 24 GYVPGVIYGRNLENKSVALDSIELLKILR-AEGKNTIINLDINGDQHSVMVTELQTDPLK 82 Query: 88 DILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSI 147 D ++HADF V + + VPV ++ GIKQGG L +E+S+ NIP +I Sbjct: 83 DSIVHADFKVVDMEAEMEATVPVNLT--GEAEGIKQGGVLQQPLYELSVTAKPKNIPQTI 140 Query: 148 TVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VD++ L++ D + + DI S + + +A+I+ P Sbjct: 141 EVDISSLEVNDVLTVGDIPTKGDYSYNHEPDEVVASILPP 180 >gi|224418392|ref|ZP_03656398.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter canadensis MIT 98-5491] gi|253827710|ref|ZP_04870595.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313141923|ref|ZP_07804116.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|253511116|gb|EES89775.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] gi|313130954|gb|EFR48571.1| 50S ribosomal protein L25 [Helicobacter canadensis MIT 98-5491] Length = 178 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS ++R+ + K + LRKNG + A IYG + A D + + N I + Sbjct: 2 LSGIIRESISKADTKALRKNGYLIANIYGKGRENIHCAFKRNDFIREVK--NKTDLIFEV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 ++G + V+ ++YQ DP++ + H D + +G V VR + K G+K G L Sbjct: 60 EVGTQKYPVVIQEYQKDPITSEITHVDLMLAQKGVEAKYSVKVRIVGIAK--GLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + + N+P +++ DL +GD + + D+ + + ++ I ++ Sbjct: 118 MVSKKRIKVKAAPENLPKDYEINVTDLDVGDVVLVRDLPQNNGVKIVERDDVAIVGVIKS 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|118444097|ref|YP_877070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] gi|118134553|gb|ABK61597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 194 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 6/183 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFM 61 + ++ R K A +R+NG++P IIYG ++ P+ +S + + L +N Sbjct: 1 MSQAAIAISERQKTDT--ANKIRRNGEVPCIIYGEHLEKSIPVKVSYNKLMRLLK-ENSK 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I L + E+ + + K+ Q D +S +IH DF V++ + + +PV F Sbjct: 58 GSIFKLKLNDEIRNCVIKEIQNDALSGNVIHVDFQNVNKNEVIKMTIPVEFTGIESLQSR 117 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K + + E+ + IP++I +D + + D I + DI+LPE +S+ + + Sbjct: 118 KLILETFIT--EIEMQGKVEEIPENIVIDASTMNFDDKIFVHDIKLPEGIRLLSEADALV 175 Query: 182 ATI 184 A + Sbjct: 176 AVV 178 >gi|119953561|ref|YP_945771.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia turicatae 91E135] gi|254801036|sp|A1R0K9|RL25_BORT9 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119862332|gb|AAX18100.1| LSU ribosomal protein L25P [Borrelia turicatae 91E135] Length = 182 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD L R G AR +R +IPA++YG SD I +++ + +KR Sbjct: 1 MDSSRI-LKYESRLNFGSLCARRIRAKSEIPAVVYGKESDVLHIKIASNEFNKRFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L GK V KD + ++ H DF +V + ++ ++F+ S G Sbjct: 59 DNTVLILSDGKVERCVFIKDVSENITKGLIYHVDFYEVDRNRDIERYIAIKFV--GASIG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 +K+GG L+V+ ++ + ++P+ + VDL +K G I +DI LPE + Sbjct: 117 VKEGGTLSVLRTKIKVKALPLDLPEFVEVDLTPVKKGHQITFKDIVLPENVKLAEEDE 174 >gi|313887551|ref|ZP_07821234.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846429|gb|EFR33807.1| ribosomal protein L25, Ctc-form [Peptoniphilus harei ACS-146-V-Sch2b] Length = 211 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 6/183 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 KL RD GK LR NG+IP ++Y + + ++ KD+ K YS+ + I Sbjct: 1 MKLVLNKRDAKGKNKVDKLRANGEIPGVLYSKGKEARMVSGLEKDLLKA-YSQEGYSNIF 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 +DI E V+ K+ Q+ + + ++H D ++ + ++V VP+ ++ Sbjct: 60 DIDIDGETTSVLFKEVQMHHIKNAMVHFDLYEIDMNTEISVEVPIVLEGRDEVKVQPSSL 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMS-QLNITIA 182 V +EV++ C +P V++ +++IG++ + D+ + E + + +A Sbjct: 120 I--QVLNEVTVTCLPKYLPSEAIVNVVEMQIGETKTIADLDIFGDENIKIEHLEADEAVA 177 Query: 183 TIV 185 T+V Sbjct: 178 TLV 180 >gi|333031443|ref|ZP_08459504.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] gi|332742040|gb|EGJ72522.1| 50S ribosomal protein L25 [Bacteroides coprosuis DSM 18011] Length = 200 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 11/193 (5%) Query: 3 QKECKLSAVMRD-----KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ + R +R NG +P ++YG + A D+ +Y+ Sbjct: 1 MKTIELKGSAREIAERSSDQTRAIREIRNNGGVPCVLYG-GETNHHFTVKASDLRGLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + + L+ + I +D Q PVSD ++H DF +++E + + + VP++ K Sbjct: 60 PDIHVVNIDLEGKQ--FMAILQDIQFHPVSDKILHVDFKEINETNPIVMEVPIKLQGLAK 117 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 G+K GGKL ++ + NIP+ + +D+ L++G +I + ++ E ++ Sbjct: 118 --GVKAGGKLQSQMRKLKVRALYTNIPERLVIDVTKLELGKTIKVGEVSF-ENLDILNAK 174 Query: 178 NITIATIVAPISG 190 I + + Sbjct: 175 EAVICAVRLTRAA 187 >gi|323490990|ref|ZP_08096184.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] gi|323395346|gb|EGA88198.1| 50S ribosomal protein L25 [Planococcus donghaensis MPA1U2] Length = 214 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGK-GSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K++A R+ K + LR G +P ++YG ++ P+ ++ D+ K L ++ + Sbjct: 2 VKMTAQKRESSNKNSALTELRSQGNVPGVVYGFKTETTPVTVTEIDLIKTLR-ESGRNGV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L+I +V+ DYQ+D + H DFL ++ + V V +S G K+G Sbjct: 61 IKLEIDGTTKNVVLSDYQMDALKGSFKHVDFLAINMSDELEVSAAVHLT--GESAGEKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G + EV++ ++IPD++ VD+ DL IG++I + DIR + + + + + Sbjct: 119 GFITQPNREVNIRVKPSDIPDALEVDITDLAIGETITVGDIRGTVSYEILDEDDFILVSA 178 Query: 185 VAPI 188 AP Sbjct: 179 TAPR 182 >gi|313203697|ref|YP_004042354.1| LSU ribosomal protein l25p [Paludibacter propionicigenes WB4] gi|312443013|gb|ADQ79369.1| LSU ribosomal protein L25P [Paludibacter propionicigenes WB4] Length = 191 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 K L +R +GK + + R +P ++YG +++ + +I K +YS Sbjct: 1 MKTFDLKGTVRTDLGKKATKAERTVDNVPCVLYG-VAENVHFTTTVSEIRKLVYSPEVF- 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ L+IG ++ I K Q PV+D ++H DFL ++E V V++PV+ + G+K Sbjct: 59 -VVNLEIGGKVTKAIMKALQFHPVTDKVLHMDFLAITEDKPVVVNLPVKLE--GLAEGVK 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GGKL + + + IP++I +D+ +L +G SI + + +P ++ N +A Sbjct: 116 AGGKLALEMRNLKVKGLYTQIPENIVIDVTELGLGKSIQVAKVSVP-NLEILNAKNAVVA 174 Query: 183 TI 184 + Sbjct: 175 QV 176 >gi|15618858|ref|NP_225144.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae CWL029] gi|4377274|gb|AAD19087.1| General Stress Protein [Chlamydophila pneumoniae CWL029] Length = 185 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E + +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPIKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|159899066|ref|YP_001545313.1| 50S ribosomal protein L25/general stress protein Ctc [Herpetosiphon aurantiacus ATCC 23779] gi|259646690|sp|A9B076|RL25_HERA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|159892105|gb|ABX05185.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Herpetosiphon aurantiacus ATCC 23779] Length = 199 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 3/188 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M + +L+ R+ GK + LR G +P I G +P + ++ +K + + Sbjct: 1 MANETLRLALQPREITGKK-VQSLRDQGILPIGICGRGIEPYSAQVDEREFNKVINQAGY 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 I G++ + Q + V++ +IHAD V + V + + V EN Sbjct: 60 SGLIELSIPGQKRQVAFLLEVQRNSVTNRIIHADLRVVDANAPVELDIHVALQGENDMVS 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL-KIGDSIHMEDIRLPEKTSSMSQLNI 179 LN+V + + ++P I +D + L +IG I ++D+ LP + + Sbjct: 120 RGNA-VLNLVQSVIRVRALPGDVPHQIDIDASSLTEIGQQILVKDLSLPATVEILDDVET 178 Query: 180 TIATIVAP 187 I T+ P Sbjct: 179 LILTLGYP 186 >gi|15836482|ref|NP_301006.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae J138] gi|16752081|ref|NP_445447.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|33242317|ref|NP_877258.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila pneumoniae TW-183] gi|12644491|sp|Q9Z6V7|RL25_CHLPN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|7189823|gb|AAF38695.1| general stress protein Ctc [Chlamydophila pneumoniae AR39] gi|8979323|dbj|BAA99157.1| general stress protein [Chlamydophila pneumoniae J138] gi|33236828|gb|AAP98915.1| general stress protein [Chlamydophila pneumoniae TW-183] Length = 185 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA++Y I + A K L S + Sbjct: 1 MELVVTSRETGKKSFLKKIRQQGGIPAVVYSAGKSLANITVDALVFKKFLSNLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 T+ +L ++ + KD Q + +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TVFSLSYEGRIIKALVKDIQYQITTYDVIHLDFEELVEDRPVKLNIPIRCINAVDCIGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V V ++C +I + +D+ + + + + DI++P +++ L Sbjct: 121 LGGSLRQVIRAVRVVCKPKDIVPFLELDVRSVGLSQTRKLSDIKIPAGIETITPLKEVAI 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|296272451|ref|YP_003655082.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] gi|296096625|gb|ADG92575.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arcobacter nitrofigilis DSM 7299] Length = 178 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++RD + K SA+ L+++G I A IYG + A D + L N T + Sbjct: 2 LEGIVRDSITKQSAKQLKRDGYILANIYGKGVENINAAFKRNDFVRYLK--NKTTVAFDV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ K+YQ P++ L+H D + G VPV K G+K G Sbjct: 60 KVGDTVCKVVVKEYQKAPITSELLHVDLMMALPGVKTNYLVPVTVEGTPK--GLKNKGLF 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V++ C N+P++ + ++DL GD++ + ++ +PE + I ++ Sbjct: 118 VFHKKRVAVKCTIENLPENFHIKISDLDTGDNVLVRNLTMPEGVDCYLDPRVPIVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|89160905|gb|ABD62995.1| ribosomal protein L25 [Borrelia burgdorferi N40] Length = 189 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG D + + + + +K+ T+L L Sbjct: 31 LSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT-DNTVLIL 89 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + +VP++ I S G+K+GG L Sbjct: 90 DDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVGVKEGGIL 147 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP 168 V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 148 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLP 188 >gi|283853056|ref|ZP_06370312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] gi|283571523|gb|EFC19527.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio sp. FW1012B] Length = 198 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 5/187 (2%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSK 58 ++ L+ R +GKG+ R LR +P + Y P+ + K + + S Sbjct: 1 MKETHSLAVKTRAGIGKGANRKLRAEDMVPGVYYDATGVNIPVMVEHLPLKKLYAKTASA 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 + ++ + GKE + + P + H DF V + VH+PV K+ Sbjct: 61 HVFDLLIESENGKETKPALVWKLEHHPTKPRITHVDFYGVDLTKAIRVHIPVEVT--GKA 118 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLN 178 G +GG + + + + +IPD + +D+ DL + +++ + D+ LPE ++ N Sbjct: 119 KGQVKGGAMVLHRETIEVTSLPLSIPDKVVIDVTDLDLNETVQVADLALPEGVKAVYDDN 178 Query: 179 ITIATIV 185 I I+ Sbjct: 179 YAILGIL 185 >gi|167579760|ref|ZP_02372634.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis TXDOH] gi|167617836|ref|ZP_02386467.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis Bt4] Length = 167 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C ++P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAESSPAVKLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSS---MSQLNITIATIVAPISG 190 +DI LP + + N +A+ P Sbjct: 121 AKDIVLPNGVALTPHVDAENPVVASATIPAGA 152 >gi|187776969|ref|ZP_02993442.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] gi|187775628|gb|EDU39430.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC 15579] Length = 178 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R+ G++P IIYG + + ++ + S+ + Sbjct: 3 KLFVEKRNC---KNSNKIRREGKVPGIIYGKNLNNLMFEVGEIEL-NSMISQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ G V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 VNYGGADYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDELIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I +DL+ IG + + D+ L E + M L+ TIA+I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMIDLSQYNIGKTFRISDLELGEDITFMESLDSTIASI 175 >gi|229915838|ref|YP_002884484.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sp. AT1b] gi|259646687|sp|C4L193|RL25_EXISA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|229467267|gb|ACQ69039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sp. AT1b] Length = 215 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 KL R+ + LRK G+ ++YG D PI D+ K L + + Sbjct: 2 TNKLQVSKRELRPRSLRTKLRKEGKALGVVYGYKVDSTPIVFDEMDLRKILR-DHGDNAL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L ++ + + DP ++ H +F+ V V + + + G+K+G Sbjct: 61 IELHYDGNKINTLVHGSETDPFTNFYQHVEFMAVKMDEETEVEADIVLV--GDAKGVKEG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L ++V++ NIP+ I +D+++L IGDS+ + D+ + +S+ ++ IA++ Sbjct: 119 GYLAQSLYKVTVAATPANIPERIELDVSELGIGDSVTVADLPEEKSYKIVSEPDMHIASV 178 >gi|182417130|ref|ZP_02625554.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667625|ref|ZP_04527609.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378972|gb|EDT76478.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237655973|gb|EEP53529.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 195 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E L+ R K SA+ RK GQ+P IIYG + D+ + Sbjct: 1 MEELILN--KRMKNSSNSAKKERKKGQVPGIIYGKKLGNLMFEIGEMDL-VSELNITGEH 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 ++ D I KD Q D ++ ++H D +VS V VP++F K + Sbjct: 58 GVINFDFDGYNGTAIIKDIQKDALTHKVMHIDLEEVSSNENVIAEVPIKF--NGKDFLSQ 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G L V + C ++P SI +D++ G + + D+ + + S + L A Sbjct: 116 KGVVLQSQKDSVKVSCKPQDLPKSINIDVSKAHGGSTYKLSDLEVGAEISIVDDLATVCA 175 Query: 183 TIV 185 ++V Sbjct: 176 SVV 178 >gi|261838770|gb|ACX98536.1| ribosomal protein L25 [Helicobacter pylori 51] Length = 178 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|62185394|ref|YP_220179.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila abortus S26/3] gi|81312456|sp|Q5L563|RL25_CHLAB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|62148461|emb|CAH64231.1| putative 50S ribosomal protein L25 [Chlamydophila abortus S26/3] Length = 185 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A SK L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V + +P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYHVTSYRVIHLDFEELIEDRDVKLKIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI++P ++ L Sbjct: 121 LGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQIPAGLRPITPLKEVAV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|317011631|gb|ADU85378.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SouthAfrica7] Length = 178 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|45477205|sp|Q9RX88|RL25_DEIRA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28948894|pdb|1NJM|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) And The Antibiotic Sparsomycin gi|28948900|pdb|1NJP|T Chain T, The Crystal Structure Of The 50s Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With A Trna Acceptor Stem Mimic (Asm) gi|29726807|pdb|1NWX|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 gi|29726838|pdb|1NWY|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin gi|61680355|pdb|1XBP|T Chain T, Inhibition Of Peptide Bond Formation By Pleuromutilins: The Structure Of The 50s Ribosomal Subunit From Deinococcus Radiodurans In Complex With Tiamulin gi|190613508|pdb|2ZJP|S Chain S, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613538|pdb|2ZJQ|S Chain S, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613569|pdb|2ZJR|S Chain S, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613676|pdb|3CF5|S Chain S, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282475|pdb|3DLL|S Chain S, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714559|pdb|3PIO|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714589|pdb|3PIP|S Chain S, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit Length = 237 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K I A+ Y N + AL K + ++ Sbjct: 1 MELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQSTTGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E + K Q+D IH DF V+ G V V VPV +S G QGG Sbjct: 54 ITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTT--GRSQGEVQGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T+ ++ Sbjct: 112 LVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSV 171 Query: 185 VAPI 188 + P Sbjct: 172 LPPR 175 >gi|15612454|ref|NP_224107.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori J99] gi|7674253|sp|Q9ZJC4|RL25_HELPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|4156009|gb|AAD06970.1| putative ribosomal protein L25 [Helicobacter pylori J99] Length = 178 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGVENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|153939671|ref|YP_001392568.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152935567|gb|ABS41065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|295320554|gb|ADG00932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. 230613] Length = 189 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 L+A++R+K GK RK G P IIYG + I + + S Y +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMK-ESIKVKFEVPSLLRYLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q + + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I V + + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVVSVGENEPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|301166403|emb|CBW25979.1| 50S ribosomal protein L25 [Bacteriovorax marinus SJ] Length = 204 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 10/182 (5%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L R++ + +RK G +P ++YG + + + I K L+ + + Sbjct: 5 LKTEWREE----PVKAIRKEGYVPGVVYGKGIESVNFKVPSIAIRKFLHHSG---KVFEV 57 Query: 68 DI-GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ G+ V + Q D + D ++H F ++S TV +P+ F ++ G K+GG Sbjct: 58 EVAGRGKHLVSLDNVQWDHMGDRMLHVSFHKISANEKTTVTLPIHFE--GEAAGKKEGGV 115 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 ++ V HEV + +IP+ I+VD+ L + ++DI P+ + + + Sbjct: 116 VHHVLHEVEVTGLPGDIPEFISVDITALGMHGHFSLKDIPCPKGLEWAHDVEANVVSCHP 175 Query: 187 PI 188 P Sbjct: 176 PK 177 >gi|320095754|ref|ZP_08027401.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977310|gb|EFW09006.1| 50S ribosomal protein L25 [Actinomyces sp. oral taxon 178 str. F0338] Length = 197 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 7/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG++R R+ +IPA++YG+ +DP I + D+ + ++ L Sbjct: 7 LIAETRTEFGKGASRRARRAAKIPAVLYGHGADPVHIDVPGHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + + K+ Q+ PVS L+HADFL V G V V VPV E+ + Sbjct: 65 KVDGKSQLALVKEVQVHPVSRNLLHADFLAVKAGEKVDVEVPVVVDGESAPGTAHTIEEF 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + + A IP+ + V + L+ G ++ + D+ LP I +I Sbjct: 125 -----TILVKASATAIPEDLKVSIEGLEAGSAVRVADLVLPAGVEVELDPEQIIVSIQ 177 >gi|208435364|ref|YP_002267030.1| ribosomal protein L25 [Helicobacter pylori G27] gi|226736329|sp|B5Z9B5|RL25_HELPG RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|208433293|gb|ACI28164.1| ribosomal protein L25 [Helicobacter pylori G27] gi|307638152|gb|ADN80602.1| LSU ribosomal protein L25p [Helicobacter pylori 908] gi|325996751|gb|ADZ52156.1| 50S ribosomal protein L25 [Helicobacter pylori 2018] gi|325998346|gb|ADZ50554.1| 50S ribosomal protein L25 [Helicobacter pylori 2017] Length = 178 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|317179673|dbj|BAJ57461.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F30] gi|332674266|gb|AEE71083.1| 50S ribosomal protein L25 [Helicobacter pylori 83] Length = 178 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|29840577|ref|NP_829683.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydophila caviae GPIC] gi|71153132|sp|Q821W5|RL25_CHLCV RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|29834927|gb|AAP05561.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila caviae GPIC] Length = 185 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 3/183 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRL---YSKNFMT 62 +L R+ K + +R+ G IPA+IY I + A K L S + Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFGKFLSSLESGALSS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 TI +L + + KD Q S +IH DF ++ E V +++P+R IN G+K Sbjct: 61 TIFSLSYEGRTIKALVKDIQYQVTSYRVIHLDFEELIEDRDVKLNIPIRCINAVDCVGVK 120 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 GG L V + ++C +I + +D+ L + + + DI +P ++ L + Sbjct: 121 LGGSLRQVIRAMRVVCKPKDIVPCLELDVRSLGLSQTRKLADINIPAGLRPITPLKEVVV 180 Query: 183 TIV 185 T+ Sbjct: 181 TVS 183 >gi|237713464|ref|ZP_04543945.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262407250|ref|ZP_06083798.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|293370794|ref|ZP_06617340.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|294644676|ref|ZP_06722426.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294809063|ref|ZP_06767785.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|298482671|ref|ZP_07000855.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] gi|229446446|gb|EEO52237.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D1] gi|262354058|gb|EEZ03150.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22] gi|292634154|gb|EFF52697.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f] gi|292640010|gb|EFF58278.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a] gi|294443788|gb|EFG12533.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC 1b] gi|295087142|emb|CBK68665.1| LSU ribosomal protein L25P [Bacteroides xylanisolvens XB1A] gi|298271134|gb|EFI12711.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22] Length = 196 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + + + + R Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGG---NEVVHFTVTNEGLRNLV 57 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 58 YTPHIYVVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|109948223|ref|YP_665451.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter acinonychis str. Sheeba] gi|123066070|sp|Q17V74|RL25_HELAH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|109715444|emb|CAK00452.1| 50S ribosomal protein L25 [Helicobacter acinonychis str. Sheeba] Length = 178 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVSCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV++ + G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVKY--QGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|224534151|ref|ZP_03674731.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] gi|224514576|gb|EEF84890.1| ribosomal protein L25, Ctc-form [Borrelia spielmanii A14S] Length = 176 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 LS R G +AR +R +IPA++YG +D + +++ + +K+ T+L L Sbjct: 1 LSCKYRSSFGSSNARRIRAKCEIPAVVYGQGNDVLHLKINSSEFNKKFAKFT-DNTVLIL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D GK V KD + S ++ H DF +V + + ++P++ I S G+K+GG L Sbjct: 60 DDGKFERCVFVKDVAENIASKLIYHIDFYEVDKRVELEKYIPIKLI--GASIGVKEGGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM-SQLNITIATI 184 V+ +V + ++P+ I +DL + GD + ++D+ LP S N+ + I Sbjct: 118 TVLKEQVKVRSLPLDLPEFIELDLTPVNKGDRVLLKDLLLPSNVRLAESDENLEVVII 175 >gi|257456706|ref|ZP_05621896.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] gi|257445899|gb|EEV20952.1| ribosomal protein L25, Ctc-form [Treponema vincentii ATCC 35580] Length = 223 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 2/182 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E L+A R GK +A R+ ++PA+IY + I + +D K + T Sbjct: 12 MEERVLTACRRTGFGKAAAAKCRRASRLPAVIYDHTGHSTAIDVPYRDFEKLFKTVTEST 71 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I K+ V KDYQ D VSD + HADF V G + + +R + Sbjct: 72 LITVKVDEKDEYEVFIKDYQYDIVSDKVSHADFYAVERGQLLRTKIQIRL--SGSPEACR 129 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 QG L E+ + C ++P+ I V++ L ++IH+ DI++PE ++ ++ +A Sbjct: 130 QGAVLETGIAELEVECLPRDLPERIIVNVETLGANEAIHVRDIKVPEGVKILTDADLAVA 189 Query: 183 TI 184 + Sbjct: 190 MV 191 >gi|261749230|ref|YP_003256915.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497322|gb|ACX83772.1| putative ribosomal L25p family stress protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 209 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + +S R+ +GK +R +G++P I+YG P + S + K +Y+ Sbjct: 1 MQYINISGKKRN-IGKKFIETIRLSGEVPCILYGKDI-NIPFSTSLETFKKLVYTPELYW 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + ++ ++ + + K+ Q DP+S+ ++HADF ++ + + + +P+ + G+ Sbjct: 59 VSIQIEGEEKNIKAVKKEIQFDPISEKILHADFCKIEDCKPMILEIPI--KTFGRPIGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG+ ++ + ++ P I +D+ L IGD I ++D+ L ++ + + LN +A Sbjct: 117 KGGEYYSPIRKLKVKAFPSSFPKYIKLDVQSLDIGDRITVKDL-LKKEYNILHPLNTLVA 175 Query: 183 TI 184 + Sbjct: 176 RV 177 >gi|153807759|ref|ZP_01960427.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] gi|149129368|gb|EDM20582.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185] Length = 196 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + + + + R Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGG---NEVVHFTVPNEGLRNLV 57 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 58 YTPHIYVVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E MS Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSF-EGLELMSAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|187776863|ref|ZP_02993336.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] gi|187775522|gb|EDU39324.1| hypothetical protein CLOSPO_00402 [Clostridium sporogenes ATCC 15579] Length = 189 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 ++A++R+K GK RK G P IIYG + I + + S Y +K + Sbjct: 1 MSNTSMTAIIREKSGK----KCRKEGFAPGIIYGAEMK-EAIKVKFEVPSLLRYLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q +P + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGDKKEYVLIKEIQKEPTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I V++ + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVVNVGENQPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|319956047|ref|YP_004167310.1| LSU ribosomal protein l25p [Nitratifractor salsuginis DSM 16511] gi|319418451|gb|ADV45561.1| LSU ribosomal protein L25P [Nitratifractor salsuginis DSM 16511] Length = 178 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A IY N D A + + + K + Sbjct: 2 LEGIVRESIGKSNAKKLRRDGYLVANIYANGVDNVHAAFKQGEFIRTVRRKE--KLDFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +V+ ++YQL PV+ ++H D G VPV + K GIK G L Sbjct: 60 KVGDTEYNVVIQEYQLHPVTGEIMHVDLRVAIPGHVTDYLVPVETVGLPK--GIKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + + + P IP T+D++DL +SI + DI PE M + ++++ ++ Sbjct: 118 VITKRRLRVRGPIEKIPAKFTLDVSDLDRDESILVRDIEAPEGCRLMDRPHVSVCGVIKA 177 Query: 188 I 188 Sbjct: 178 R 178 >gi|170754875|ref|YP_001782856.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169120087|gb|ACA43923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] Length = 189 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY-SKNFM 61 L+A++R+K GK RK G P IIYG + I + + S Y +K + Sbjct: 1 MSSASLTAIVREKSGK----KCRKEGFAPGIIYGAEMK-ESIKVKFEVPSLLRYLNKAGI 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L L+IG + +V+ K+ Q + + +++ D VS + +PV+F + + Sbjct: 56 NSRLWLNIGNKKEYVLIKEIQKESTTGEILNIDMQAVSHDEVIKNSIPVKFEGKEQLEHK 115 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + EV+ +P+ I V + + + GD+I + DI+L E + + Sbjct: 116 GFLLEEFTPYIEVAGKV--GILPEIIVVSVGENQPGDNIKVSDIKLDEDIKLYTDPEELL 173 Query: 182 ATIV 185 AT+ Sbjct: 174 ATVS 177 >gi|331269172|ref|YP_004395664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] gi|329125722|gb|AEB75667.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum BKT015925] Length = 224 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + +++K + K+ + + Sbjct: 27 LKAEERIKNSVHSARRERKKGMVPGVLYGAGMQNLLFEVGELELNKEIL-KHGEHGGINV 85 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 DI I K+ Q DPV+ +IH D +V+ V +P+ F K+G + Sbjct: 86 DINNRKHQAIVKEVQKDPVTKKIIHVDLQEVNNEEVVQTEIPIVFKGGELIS--KRGDTI 143 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + ++IP I +DL+ + GD + D+ + + + + ++ +A + Sbjct: 144 QKEKSNIKVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMSSEITCLDDMDTILAVV 200 >gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc [Ketogulonicigenium vulgare Y25] Length = 155 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 82/144 (56%) Query: 46 LSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 +S + K L F++T++ L++ + V+ + Q V D+ H DFL+++ + V Sbjct: 1 MSFNVLLKTLRQGGFLSTLIDLNVDGKTERVVCRGVQRHVVKDLPTHVDFLRLAPTTRVK 60 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 +H+PV F NE +PG+K GG + V E+ L AN+IP+ +TVDL KIGD IH++D+ Sbjct: 61 LHIPVHFENEAAAPGVKLGGTVVHVRSEIELEVTANDIPEFVTVDLTGRKIGDVIHIQDV 120 Query: 166 RLPEKTSSMSQLNITIATIVAPIS 189 LP+ + N IA I AP Sbjct: 121 TLPKGAVPTTDRNFAIANISAPSG 144 >gi|315604958|ref|ZP_07880014.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313353|gb|EFU61414.1| ribosomal L25p family protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 197 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R + GKG+AR R+ ++P ++YG+ ++P+ + + D+ + ++ L Sbjct: 7 LLAEERTEFGKGAARRARRAAKVPTVLYGHGAEPRHLDVPEHDLFLIVR--GTKNALVEL 64 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I + + KD Q+ PV ++HADFL V G V V VPV E + + Sbjct: 65 KIAGKTQLALVKDVQVHPVRRNILHADFLAVKAGEKVDVEVPVVVTGEPVPGTVHSLEEF 124 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +++ PA IP+S+ V + ++ G ++ + D+ LP I ++ Sbjct: 125 -----TIAVKAPATAIPESLEVSIEGIEAGSAVRVADLALPSGVEVELDAETVIVSVQ 177 >gi|317013266|gb|ADU83874.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Lithuania75] Length = 178 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|298735534|ref|YP_003728055.1| 50S ribosomal protein L25 [Helicobacter pylori B8] gi|298354719|emb|CBI65591.1| large subunit ribosomal protein L25 [Helicobacter pylori B8] Length = 178 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKFKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|317181179|dbj|BAJ58965.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F32] Length = 178 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECTPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|224538934|ref|ZP_03679473.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] gi|224519452|gb|EEF88557.1| hypothetical protein BACCELL_03831 [Bacteroides cellulosilyticus DSM 14838] Length = 196 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG S+ +SA + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYG-GSENIHFTVSADGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + ++ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLIIDGKKINAIMKDIQFHPVKDTILHVDFYQIDESKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV++ L +G ++ + ++ E M+ Sbjct: 116 AEGVKAGGKLVLQMRKLKVKALYNIIPEKLTVNVAHLGLGKTVKVGELNF-EGLELMNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|317014911|gb|ADU82347.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Gambia94/24] Length = 178 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++P+ VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPNHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|210135663|ref|YP_002302102.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori P12] gi|226736328|sp|B6JNZ4|RL25_HELP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|210133631|gb|ACJ08622.1| 50S ribosomal protein L25 [Helicobacter pylori P12] Length = 178 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|320335303|ref|YP_004172014.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] gi|319756592|gb|ADV68349.1| 50S ribosomal protein L25 [Deinococcus maricopensis DSM 21211] Length = 227 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A+ R K S G +PA+ Y + A+ K + + Sbjct: 1 MELKAIARTGQEKLS------EGYMPAVAYHQGT-NVMFAIERKAFDRAFRQQGKTGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E + K Q+D IHADFL V+ G V V VPV KS G GG Sbjct: 54 IAIEGGETFPALVKAVQMDKRKREAIHADFLMVTYGEPVQVDVPVHTT--GKSQGEIMGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 ++VV H +S++ P IP I VD+ L IGD + DI LP+ S ++T+ ++ Sbjct: 112 LVDVVVHNLSVIAPGPRRIPTEIAVDVTKLNIGDHVKAGDIALPDGVKLASDADLTVISV 171 Query: 185 VAPI 188 + P Sbjct: 172 LPPR 175 >gi|317010130|gb|ADU80710.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori India7] Length = 178 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNCAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +S+ + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESVLVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|188528267|ref|YP_001910954.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|226736330|sp|B2UVP2|RL25_HELPS RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|188144507|gb|ACD48924.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Shi470] gi|297380649|gb|ADI35536.1| ribosomal protein L25, Ctc-form [Helicobacter pylori v225d] gi|308062760|gb|ADO04648.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Cuz20] gi|308064256|gb|ADO06143.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori Sat464] Length = 178 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVTPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|15646105|ref|NP_208287.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 26695] gi|2500311|sp|P56078|RL25_HELPY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|2314675|gb|AAD08537.1| general stress protein (ctc) [Helicobacter pylori 26695] Length = 178 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VP+ ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPI--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|108563842|ref|YP_628158.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori HPAG1] gi|217031842|ref|ZP_03437345.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254780006|ref|YP_003058113.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori B38] gi|308185266|ref|YP_003929399.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] gi|122980429|sp|Q1CRD8|RL25_HELPH RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|107837615|gb|ABF85484.1| ribosomal protein L25 [Helicobacter pylori HPAG1] gi|216946494|gb|EEC25096.1| hypothetical protein HPB128_199g50 [Helicobacter pylori B128] gi|254001919|emb|CAX30172.1| 50S ribosomal subunit protein L25 [Helicobacter pylori B38] gi|261840172|gb|ACX99937.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori 52] gi|308061186|gb|ADO03082.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori SJM180] Length = 178 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGIENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|167762594|ref|ZP_02434721.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] gi|167699700|gb|EDS16279.1| hypothetical protein BACSTE_00950 [Bacteroides stercoris ATCC 43183] Length = 197 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDETKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNAIPEKLIVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|319901552|ref|YP_004161280.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] gi|319416583|gb|ADV43694.1| LSU ribosomal protein L25P [Bacteroides helcogenes P 36-108] Length = 196 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGGG-ENIHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALFNLIPEKLVVNVAHLGLGKTVKVGELNY-ENLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|315585883|gb|ADU40264.1| 50S ribosomal protein L25 [Helicobacter pylori 35A] gi|317178201|dbj|BAJ55990.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F16] gi|317182701|dbj|BAJ60485.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori F57] Length = 178 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|118443386|ref|YP_877848.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium novyi NT] gi|118133842|gb|ABK60886.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium novyi NT] Length = 197 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P ++YG + ++++ + KN + L Sbjct: 4 LKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVL-KNGEYGGIDL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I I K+ Q DPV+ ++H D ++ + + +P+ F+ E K+G + Sbjct: 63 QINNNHHKAIVKEIQKDPVTKKILHIDLQEIDKNEVIQTEIPINFVGEEFIA--KRGEIV 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + ++IP SI VD++ + GD + D+ + + + ++ +A + Sbjct: 121 QKEKSNIKVQGKYDDIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMDTILAVV 177 >gi|167835375|ref|ZP_02462258.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia thailandensis MSMB43] Length = 167 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 43 PIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 I L + L + F ++IL L++ + V+ +D Q P +++H DF ++ Sbjct: 1 MIELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKK 60 Query: 103 TVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIH 161 + VP+ F+N SP +K ++ V E+ + C ++P+ + VDL+ ++ G S+H Sbjct: 61 KLHTKVPLHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLH 120 Query: 162 MEDIRLPEKTSS---MSQLNITIATIVAPISG 190 ++DI LP + + N +A P Sbjct: 121 VKDIALPNGVALTPHVDAENPVVALATIPAGA 152 >gi|320354572|ref|YP_004195911.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] gi|320123074|gb|ADW18620.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfobulbus propionicus DSM 2032] Length = 185 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 6/187 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + + + +R GKG R LR PA +Y + + + + K L + Sbjct: 1 MLQVNVESSVRTVFGKGPMRQLRMQSITPANLYSGGNKSVSLQVETAKLYKSLLFIHGRN 60 Query: 63 TILTLDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 ++TL I K HV+ ++ Q PV+ L+H DFL++ VPV ++ K Sbjct: 61 AVITLKIEGDDKGERHVLVQEIQKAPVTGSLLHVDFLEIDLNKAAKFTVPVEYVGTAK-- 118 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLN 178 G+ GG+L V V L +IPD I VD+ L+ G + I D+ LPEK + + + Sbjct: 119 GVDLGGELQVFRDSVQLRGCPLDIPDVIQVDITPLEQGGAGITYGDLPLPEKVEMLEKAS 178 Query: 179 ITIATIV 185 + Sbjct: 179 TVCVAVQ 185 >gi|255692808|ref|ZP_05416483.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] gi|260621437|gb|EEX44308.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565] Length = 196 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + + + + R Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEMRKNGGVPCVLYGG---NEVVHFTVTNEGLRNLV 57 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 58 YTPHIYVVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + ++++ L +G +I + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIINVSHLGLGKTIKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|260171341|ref|ZP_05757753.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. D2] gi|315919652|ref|ZP_07915892.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693527|gb|EFS30362.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 196 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+G +P ++YG + + + + R Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKDGGVPCVLYGG---NEVVHFTVTNEGLRNLV 57 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 58 YTPHIYVVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|189467496|ref|ZP_03016281.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] gi|189435760|gb|EDV04745.1| hypothetical protein BACINT_03885 [Bacteroides intestinalis DSM 17393] Length = 196 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENIHFTVPADGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + ++ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLVIDGKKINAIMKDIQFHPVKDTILHVDFYQIDESKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +T+++ L +G ++ + ++ E M+ Sbjct: 116 AEGVKAGGKLVLQMRKLKVKALYNVIPEKLTINVAHLGLGKTVKVGELSF-EGLELMNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|282891672|ref|ZP_06300159.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498462|gb|EFB40794.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 186 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 4/184 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT--- 62 KL A R+ + + LR+ G+IPA+IY S + +++ + + L Sbjct: 1 MKLKAFKRNVEKRCNVNKLRREGKIPAVIYKKGSSGEELSVDSIMFTAALRKVEPGHLST 60 Query: 63 -TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + D VI K+ Q + + +IH DF ++ +G+ V V VP+ + PGI Sbjct: 61 TIFILEDENGAERRVIVKEIQYNVTNYDVIHLDFEELIDGTPVNVKVPIEIVGVADCPGI 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K GG V + + C +IP S +D++ L +G+S + D+ + + L+ Sbjct: 121 KLGGVPRQVIRSLKVRCLPKDIPASFPIDISTLSLGESRRLSDLEIANTLRPLMNLSEVA 180 Query: 182 ATIV 185 IV Sbjct: 181 VAIV 184 >gi|148381066|ref|YP_001255607.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 3502] gi|153931183|ref|YP_001385439.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. ATCC 19397] gi|153935360|ref|YP_001388846.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A str. Hall] gi|148290550|emb|CAL84678.1| putative general stress protein [Clostridium botulinum A str. ATCC 3502] gi|152927227|gb|ABS32727.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397] gi|152931274|gb|ABS36773.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall] Length = 178 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + + +++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDDLIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 IVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|297624374|ref|YP_003705808.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] gi|297165554|gb|ADI15265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Truepera radiovictrix DSM 17093] Length = 208 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 9/182 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L+A R LR G++P ++Y N P+++ ++ K S+ + +++ Sbjct: 1 MNLTAQRRTPGKTSD---LRAQGRLPGVVY-NKELNIPVSVELREFDKAFRSQ-GVASLI 55 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + E V+ K Q+D +H DF V+ G V V VP+ F+ + G ++GG Sbjct: 56 NLQLDGESHDVLVKAVQMDKRRREPLHVDFYAVTAGQPVDVFVPINFV--GTAIGAREGG 113 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI--RLPEKTSSMSQLNITIAT 183 +++ H+V + IP+ I VD++ L I DS+H++D+ LP + + L T+ T Sbjct: 114 QVDAQRHQVHIRILPRLIPNHIDVDVSALAINDSLHLKDVLSALPSEAEVLDDLEETLIT 173 Query: 184 IV 185 I+ Sbjct: 174 IL 175 >gi|160887365|ref|ZP_02068368.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|237722654|ref|ZP_04553135.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|299148941|ref|ZP_07042003.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] gi|156107776|gb|EDO09521.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483] gi|229448464|gb|EEO54255.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4] gi|298513702|gb|EFI37589.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23] Length = 196 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKNG +P ++YG + + + + R Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKEIRKNGGVPCVLYGG---NEVVHFTVTNEGLRNLV 57 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 58 YTPHIYVVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E +S Sbjct: 116 AEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELSF-EGLELISAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|218961881|ref|YP_001741656.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] gi|167730538|emb|CAO81450.1| ribosoma protein L25 [Candidatus Cloacamonas acidaminovorans] Length = 188 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 5/167 (2%) Query: 24 LRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQL 83 LR +G IPA+IYG + +++ D ++ + +++ + H I KD Q+ Sbjct: 4 LRASGMIPAVIYGPELESISVSIPKGDFTQLYKKSFAEVSFWDIELNGDQFHTILKDKQI 63 Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 PV+ ++H DF+ VS + + V V I + G+K+GG + +V V + C AN I Sbjct: 64 HPVTREMLHLDFMVVS--AEAIIEVEVPIIITGEPIGVKEGGMMEIVQRNVKISCKANEI 121 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEK-TSSMSQLNITIATIVAPIS 189 PD +T+D+++LKIG+S+H+ D LP+ ++T+ I AP + Sbjct: 122 PDELTLDVSNLKIGESLHIRD--LPKGNWEVKEHSDVTLVAIHAPRA 166 >gi|150015868|ref|YP_001308122.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] gi|149902333|gb|ABR33166.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium beijerinckii NCIMB 8052] Length = 189 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E L R K AR +R+ G+IP +IYG + + + K S + Sbjct: 1 MEELNL--TKRIKTASHGARKVRREGKIPGVIYGKEIGNEIFTVDESALLKET-SASGEH 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ ++ + + K+ Q + + + IH DF +V+ T+ V ++ + + Sbjct: 58 GIVKFNLDGRKGNAVIKEIQRNALGNKAIHVDFEEVAANDTMHTEVLIKIVGKGILES-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +G L V + C A ++P + +D+++ + G ++++ E + L+ I Sbjct: 116 KGLILQTQRDLVKVSCKAKDLPKDVELDVSNGQAGTVYTFKNLKFAEGIEVLDDLSTVIG 175 Query: 183 TIV 185 +I Sbjct: 176 SIS 178 >gi|172057598|ref|YP_001814058.1| 50S ribosomal protein L25/general stress protein Ctc [Exiguobacterium sibiricum 255-15] gi|226736322|sp|B1YGY0|RL25_EXIS2 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|171990119|gb|ACB61041.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Exiguobacterium sibiricum 255-15] Length = 225 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 3/181 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + + LR G+ ++YG + PI+ K++ K + + + Sbjct: 2 SVTLKVEEREVRPRSLRKQLRHEGKALGVVYGYKVESTPISFDEKELVKVIR-DHGENVL 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + L IG + V+ + +D + + H +F+ V V + + ++ G K G Sbjct: 61 VALQIGGKKVNTLINKLDMDIFTPTIKHVEFIAVKMDEETEVETDIVLV--GEAAGAKLG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L+ +V++ + +P+ I VD+ +L IGDSI + D+ + +++ +I +A + Sbjct: 119 GFLSQTLFKVTVAATPDKLPERIEVDVTELAIGDSITVADLPEEKDFRVVTEGDIQVAAV 178 Query: 185 V 185 V Sbjct: 179 V 179 >gi|225551705|ref|ZP_03772649.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] gi|225371732|gb|EEH01158.1| ribosomal protein L25, Ctc-form [Borrelia sp. SV1] Length = 172 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE 72 R G +AR +R +IPA++YG +D + + + + +K+ T+L LD GK Sbjct: 2 RSSFGSSNARRIRAKSEIPAVVYGQGNDVSHLRIKSSEFNKKFAKFT-DNTVLILDDGKL 60 Query: 73 LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCH 132 V KD + S ++ H DF +V + +VP++ I S G+K+GG L V+ Sbjct: 61 ERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASVGVKEGGILTVLKE 118 Query: 133 EVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 +V + ++P+ I +DL + GD + +D+ LP I+ Sbjct: 119 QVKVRSLPLDLPEFIELDLTPVNKGDGVLFKDLVLPSNVRLAENDENLEVVII 171 >gi|322807425|emb|CBZ04999.1| ribosomal protein L25 general stress protein [Clostridium botulinum H04402 065] Length = 178 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + + ++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIEL-NSMISQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDDLIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 IVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25/general stress protein Ctc [Bradyrhizobium sp. ORS278] gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS278] Length = 191 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 90/145 (62%), Gaps = 1/145 (0%) Query: 46 LSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 + +++ +R+ + F+TTI + + + VIP+D+ LDPV D IH DF+++ +G+T+ Sbjct: 1 MEDRELRQRILAGRFLTTIFDVTLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIR 60 Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V VP+ + SPG+K+GG +N+V H + L C A NIP I D++ L+I S+H+ D+ Sbjct: 61 VSVPLHVVGSEGSPGVKRGGTVNIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDV 120 Query: 166 RLPEKTSSMS-QLNITIATIVAPIS 189 +LP ++S + T+ TIV P Sbjct: 121 KLPTGVKTLSRGEDATLVTIVPPSG 145 >gi|168187378|ref|ZP_02622013.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] gi|169294743|gb|EDS76876.1| ribosomal protein L25, Ctc-form [Clostridium botulinum C str. Eklund] Length = 199 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 3/179 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K SAR RK G +P ++YG + ++++ + K+ + Sbjct: 2 YVLKANERIKDSNHSARRERKKGMVPGVLYGAGVQNTLFEIGEIELNREVL-KHGEYGGI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L I I K+ Q DPV+ ++H D ++ + + +P+ FI E K+G Sbjct: 61 DLQIDNNHHKAILKEVQKDPVTKKILHIDLQEIDKDEVIQTEIPINFIGEEFIA--KRGD 118 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + + +NIP SI VD++ + GD + D+ + + + +N +A + Sbjct: 119 IVQKEKSNIKVQGKYDNIPKSINVDVSKMYSGDVFRVNDVEMASEIICLDDMNTILAVV 177 >gi|218129918|ref|ZP_03458722.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|317476861|ref|ZP_07936104.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] gi|217988028|gb|EEC54353.1| hypothetical protein BACEGG_01501 [Bacteroides eggerthii DSM 20697] gi|316907036|gb|EFV28747.1| ribosomal protein L25 [Bacteroides eggerthii 1_2_48FAA] Length = 197 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + V+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVRALYNAIPERLVVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|170760837|ref|YP_001788437.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A3 str. Loch Maree] gi|169407826|gb|ACA56237.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch Maree] Length = 178 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 5/178 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + + ++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIEL-NSMISQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 ++ V+ K+ Q DPV +IH D V S+ V+ + + +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENV-TNSSNLVNAEIPILFSGDELIMKKGGV 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + V + CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 118 VQKEKDSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|170757176|ref|YP_001782751.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum B1 str. Okra] gi|169122388|gb|ACA46224.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra] Length = 178 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + + +++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDELIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|153938247|ref|YP_001392394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum F str. Langeland] gi|152934143|gb|ABS39641.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland] gi|295320385|gb|ADG00763.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613] Length = 178 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P I+YG + + +++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIVYGKNLNNLMFEVGEIELNNMI-SQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDELIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|168179611|ref|ZP_02614275.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226950546|ref|YP_002805637.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum A2 str. Kyoto] gi|182669554|gb|EDT81530.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum NCTC 2916] gi|226843949|gb|ACO86615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium botulinum A2 str. Kyoto] Length = 178 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + + ++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLNNLMFEVGEIEL-NSMISQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDELIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I VDL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|210613463|ref|ZP_03289722.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] gi|210151163|gb|EEA82171.1| hypothetical protein CLONEX_01929 [Clostridium nexile DSM 1787] Length = 194 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ K A+ LRK G + I+G + P+ + ++ + L + Sbjct: 3 TLKAETRNMSLK--AKALRKEGFVTGCIFGRELEKSIPLKMEKSEVERLLK-SEGKGGRV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + + + K+ +P+ + DF + V + +NE+K G Sbjct: 60 LLQLEGKTYDALIKEVDYNPLKGFVEEIDFQALVSSEKVHSSAEIHLLNESKLVA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + HE++ ++ + I +D+ DLKIGD+I ++D+ + E ++ L+ T+ T Sbjct: 116 IPQQMLHEINYKALPASLVEKIELDVGDLKIGDTIRVKDLVIAKDENIDLITDLDSTVVT 175 Query: 184 IVAPI 188 + P Sbjct: 176 VTEPR 180 >gi|228469534|ref|ZP_04054527.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] gi|228308884|gb|EEK17559.1| ribosomal protein L25, Ctc-form [Porphyromonas uenonis 60-3] Length = 200 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKEL 73 D++GK + + LR+ +P ++YG S+ K + + A D++K +Y+ ++ LD+ + Sbjct: 5 DQLGKKATKALRREELVPVVLYG-GSETKHLVVKADDLNKLIYTPEIY--LIELDVEGKQ 61 Query: 74 VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHE 133 + KD Q PVSD +HAD +VSE + + VPV + G++ GGKL Sbjct: 62 HKAVLKDVQFHPVSDKTLHADLYEVSEEKPIVMRVPVILEGH--AIGVRAGGKLVREKRT 119 Query: 134 VSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 + + + IP+++ +D+N+LK+G +I + ++ E + + + + Sbjct: 120 LRVRAIYDKIPENLVIDVNNLKLGKTIQVHELSF-EGLELVDAPQAVVCGVKLTRAA 175 >gi|160902897|ref|YP_001568478.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] gi|160360541|gb|ABX32155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga mobilis SJ95] Length = 219 Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 10/191 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYS---KNFM 61 K++ RD K A+ R IPA +YG + K I + K++ L + Sbjct: 5 FKMNVNRRDSKVK--AKKFRNEKLIPAEVYGPALKENKHINIPYKELESMLEKVSETTLI 62 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + +E K Q VSD IH DF EG + + +P+ F + G+ Sbjct: 63 ELNVKGEDSEEKFTCFVKSVQRHKVSDQPIHVDFYVPEEGRKMNLRIPLEFE--GEPIGV 120 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNI 179 QGG LN HE+ + ++I DSI VD++ LK+G+S+ + DI+ LP+ S+ + Sbjct: 121 TQGGYLNTYVHEIPVAILPSDIVDSIKVDISALKLGESLSVSDIKSLLPKSAESLLEDEE 180 Query: 180 TIATIVAPISG 190 + +++ P S Sbjct: 181 LVISVIEPKSA 191 >gi|28210591|ref|NP_781535.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium tetani E88] gi|71153136|sp|Q896W8|RL25_CLOTE RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|28203029|gb|AAO35472.1| LSU ribosomal protein L25P [Clostridium tetani E88] Length = 193 Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 8/183 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L A R++ GK + RK G IP IIYG + + I + L K Sbjct: 1 MAEI-LIATERNEKGKTA----RKKGFIPGIIYGKDREGQSINFERGKLIAFLKEK-GEK 54 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + + + E I K+ D V+ +IH D +VS V +P+ F + K Sbjct: 55 SKMNFQLNGENKQGIIKEVGRDAVTSSIIHIDIQEVSALEKVRWTIPIFFEGREQLK--K 112 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + V EV + A++IP++IT+++ +L++G+ + ++D+ + ++L TIA Sbjct: 113 KELYIQVYLTEVEVEGKASDIPNNITLNVGNLELGEEVKVKDLNIGSNIRIFNELENTIA 172 Query: 183 TIV 185 I Sbjct: 173 IIS 175 >gi|154494974|ref|ZP_02033979.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] gi|154085524|gb|EDN84569.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC 43184] Length = 194 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 11/193 (5%) Query: 3 QKECKLSAVMRDKV-----GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 1 MKTFQLEGKSREVAATSADQKRALKAMRKNNEIPAVLYGGEKVS-HFTITKDSVRNLVYS 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + I KD Q PV+D ++H DFL+VSE V + VPV Sbjct: 60 PEIF--VVELTIDGKKTMAIVKDIQFQPVTDAILHMDFLEVSENKPVVMEVPVVLEGH-- 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKLN+ ++ + IP+ + ++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATIVAPISG 190 N + + + Sbjct: 175 NAVVCAVQLTRAA 187 >gi|308183599|ref|YP_003927726.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] gi|308065784|gb|ADO07676.1| 50S ribosomal protein L25/general stress protein Ctc [Helicobacter pylori PeCan4] Length = 178 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + K +A+ L+K+G + A IYG + A K L K + + L Sbjct: 2 LEGVIRESITKANAKALKKDGYLIANIYGKGIENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++P VD+ L + +SI + D++ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPVHYLVDVAPLDVNESILVRDLKKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|255007966|ref|ZP_05280092.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis 3_1_12] gi|313145682|ref|ZP_07807875.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] gi|313134449|gb|EFR51809.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12] Length = 196 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +R NG +P ++YG + ++ + + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKEIRNNGGVPCVLYGGG-EVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIH--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV+++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLALQMRKLKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|218262818|ref|ZP_03477176.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] gi|218223113|gb|EEC95763.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii DSM 18315] Length = 194 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 11/193 (5%) Query: 3 QKECKLSAVMRDKV-----GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ K + + +RKN +IPA++YG ++ + +YS Sbjct: 1 MKTFQLEGKSREVAATSADQKRALKAMRKNNEIPAVLYGGEKVS-HFTITKDSVRNLVYS 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I + I KD Q PV+D ++H DFL+VS+ V + VPV Sbjct: 60 PEIF--VVELAIDGKKTMAIVKDIQFQPVTDAILHMDFLEVSDNKPVVMEVPVVLEGH-- 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKLN+ ++ + IP+ + ++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLNLQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATIVAPISG 190 N + + + Sbjct: 175 NAVVCAVQLTRAA 187 >gi|168181809|ref|ZP_02616473.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|237796572|ref|YP_002864124.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium botulinum Ba4 str. 657] gi|182675191|gb|EDT87152.1| 50S ribosomal protein L25 [Clostridium botulinum Bf] gi|229262239|gb|ACQ53272.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657] Length = 178 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 7/179 (3%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 KL R+ ++ +R++G++P IIYG + +++ + S+ + Sbjct: 3 KLFIQKRNC---KNSNKVRRDGKVPGIIYGKNLSNLMFEVGEIELNNMI-SQVGEHGVTD 58 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST-VTVHVPVRFINENKSPGIKQGG 125 ++ V+ K+ Q DPV +IH D V+ S + +P+ F +K+GG Sbjct: 59 INYEGTDYKVLIKEVQKDPVKKNVIHIDLENVTNSSNLINAEIPILF--SGDELIMKKGG 116 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + V + CP +P++I +DL+ IG + + D+ L E + M L+ TI +I Sbjct: 117 VVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTIVSI 175 >gi|329961417|ref|ZP_08299540.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] gi|328531894|gb|EGF58717.1| ribosomal protein L25, Ctc-form [Bacteroides fluxus YIT 12057] Length = 196 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RK+ +P ++YG + + + + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPVEGLRNLIYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +TV++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNLIPEKLTVNVAHLGLGKTVKVGELSY-ENLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|187918701|ref|YP_001884204.1| 50S ribosomal protein L25/general stress protein Ctc [Borrelia hermsii DAH] gi|226736284|sp|B2S1C8|RL25_BORHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|119861549|gb|AAX17344.1| LSU ribosomal protein L25P [Borrelia hermsii DAH] Length = 182 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 4/182 (2%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD L R G AR +R +IPA++YG SD I + + + + + Sbjct: 1 MDSSRI-LRYEGRLDFGSLRARRIRAESEIPAVVYGKESDVLHIKIKSSEFNNKFAKFT- 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 T+L L GK V KD + ++ H DF +V + + + ++F+ S G Sbjct: 59 DNTVLILSDGKIEKCVFIKDVSENLTKRLIYHVDFYEVDKTKDIERDIAIKFV--GASVG 116 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+GG L+V+ ++ + N+P+ + VDL +K GD + +DI LP+ + + Sbjct: 117 VKEGGTLSVLRTKIKVKSLPLNLPEFVEVDLTPVKKGDQVTFKDIVLPDNVKLSEENENS 176 Query: 181 IA 182 + Sbjct: 177 VV 178 >gi|217033872|ref|ZP_03439296.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] gi|216943635|gb|EEC23080.1| hypothetical protein HP9810_870g4 [Helicobacter pylori 98-10] Length = 178 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L V+R+ + + +A+ L+K+G + A +YG + A K L K + + L Sbjct: 2 LEGVIRESITRANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKL 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 G + V+ ++YQ +PV++ LIH D L V++G VPV ++ G+K G L Sbjct: 62 --GDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPV--KHQGTPVGLKNKGIL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +S+ C ++PD VD+ L + +SI + D+ E + +I + ++ Sbjct: 118 MLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|53712489|ref|YP_098481.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis YCH46] gi|60680689|ref|YP_210833.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides fragilis NCTC 9343] gi|253563480|ref|ZP_04840937.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|265762652|ref|ZP_06091220.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|68053087|sp|Q64X29|RL25_BACFR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|81316243|sp|Q5LG55|RL25_BACFN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|52215354|dbj|BAD47947.1| putative 50S ribosomal protein L25 [Bacteroides fragilis YCH46] gi|60492123|emb|CAH06886.1| putative ribosomal L25p family stress protein [Bacteroides fragilis NCTC 9343] gi|251947256|gb|EES87538.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 3_2_5] gi|263255260|gb|EEZ26606.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16] gi|301162216|emb|CBW21761.1| putative ribosomal L25p family stress protein [Bacteroides fragilis 638R] Length = 196 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +R NG +P ++YG + ++ + + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKEIRNNGGVPCVLYG-GEEVVHFTVTNEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLVIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLE--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ +T++++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLALQMRKLKVKALYNIIPEKLTINVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|329955544|ref|ZP_08296452.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] gi|328525947|gb|EGF52971.1| ribosomal protein L25, Ctc-form [Bacteroides clarus YIT 12056] Length = 197 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 + ++ R + + + +RK+ +P ++YG + + A+ + +Y+ Sbjct: 1 MRSIEVKGTARTIAERSSEQARALKAIRKDNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + ++++ L +G ++ + ++ E ++ Sbjct: 116 AEGVKAGGKLTLQMRKLKVKALYNAIPEKLIINVSHLGLGKTVKVGELSY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|317496869|ref|ZP_07955199.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895881|gb|EFV18033.1| ribosomal protein L25 [Lachnospiraceae bacterium 5_1_63FAA] Length = 193 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFMTTIL 65 L+A RD K A+ LRK G + ++G + P+ + +++ +K L N + Sbjct: 3 TLTAEKRDLKTK--AKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFLK-DNKKGAHI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 60 TLLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDAV----QNG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIAT 183 + E+ +I + + +DL +GD IH++D+ L S ++ + + Sbjct: 116 IVEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPLAANSKISLVTPEDTLVVN 175 Query: 184 IVAPIS 189 I P + Sbjct: 176 IAEPEA 181 >gi|322379486|ref|ZP_08053852.1| 50S ribosomal protein L25 [Helicobacter suis HS1] gi|322380467|ref|ZP_08054666.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321147112|gb|EFX41813.1| 50S ribosomal protein L25 [Helicobacter suis HS5] gi|321148093|gb|EFX42627.1| 50S ribosomal protein L25 [Helicobacter suis HS1] Length = 180 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 8/188 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 MD L +R ++ K + +RK G + A +YG + D + + K Sbjct: 1 MDM----LEGEIRGELSKSERKAVRKQGMLLANLYGRKTPNVYATFKINDFIRFVKHK-- 54 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + IG+ +V+ + YQ DP+S+ L+H D + + +G ++PV+ + G Sbjct: 55 PNLDFMVKIGENAYNVVIQSYQKDPISNTLMHVDLMVLQKGVKSKFYIPVKI--HGVAVG 112 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 IK G L + H + + C ++ + +D+++L +GD+I + D+++P + N Sbjct: 113 IKNKGILMLSKHRIHVECTPEHLFSNFDLDVSNLDVGDAILVRDLQIPAHVKVLENPNNA 172 Query: 181 IATIVAPI 188 + ++ Sbjct: 173 VVGVIKAK 180 >gi|167765811|ref|ZP_02437864.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|167712528|gb|EDS23107.1| hypothetical protein CLOSS21_00302 [Clostridium sp. SS2/1] gi|291559174|emb|CBL37974.1| ribosomal protein L25, Ctc-form [butyrate-producing bacterium SSC/2] Length = 193 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFMTTIL 65 L+A RD K A+ LRK G + ++G + P+ + +++ +K L N + Sbjct: 3 TLTAEKRDLKTK--AKKLRKEGYVIGNLFGRDIENSIPLKVDSREAAKFLK-DNKKGAHI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 TL + E V I K+ + + + + +F + + + +NE+ Q G Sbjct: 60 TLLVDGENVDAIVKEIDYNAMKNETMFINFQALVADEKIHTTAAIELLNEDAV----QNG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIAT 183 + E+ +I + + +DL +GD IH++D+ L S ++ + I Sbjct: 116 IVEQSLSEIEYKAFPADIVEKVEIDLTQYNVGDMIHVKDLPLAANSKISLVTPEDTLIVN 175 Query: 184 IVAPIS 189 I P + Sbjct: 176 IAEPEA 181 >gi|158319103|ref|YP_001511610.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] gi|158139302|gb|ABW17614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus oremlandii OhILAs] Length = 197 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 79/183 (43%), Gaps = 5/183 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L+ +RD GK R++G +P ++Y K + + +++ K + S+ + Sbjct: 1 MATPVLNIELRDFKGKNQMLKTRRSGNVPGVVYSRGEKTKKVLFNEREMEK-ILSRYGQS 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 + L++G E I K+ Q + + ++H DF + E V + +P++ I+ + Sbjct: 60 MKIALNLGGERFFAIIKEIQKGSIHNEILHIDFQTLDENEKVKIQMPIQIIHREEVES-- 117 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNIT 180 + + +EV + +PD + +D L D + + D+ + E + Sbjct: 118 SVRLMQMNMNEVEIQTYPRYLPDKVELDATKLNEKDVLTIADLDIAENEHIEILEDREKV 177 Query: 181 IAT 183 IA+ Sbjct: 178 IAS 180 >gi|150006997|ref|YP_001301740.1| 50S ribosomal protein L25/general stress protein Ctc [Parabacteroides distasonis ATCC 8503] gi|255015967|ref|ZP_05288093.1| 50S ribosomal protein L25/general stress protein Ctc [Bacteroides sp. 2_1_7] gi|256841992|ref|ZP_05547497.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262384248|ref|ZP_06077383.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298377422|ref|ZP_06987375.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|301308837|ref|ZP_07214789.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] gi|166223700|sp|A6L8V4|RL25_PARD8 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|149935421|gb|ABR42118.1| putative 50S ribosomal protein L25 [Parabacteroides distasonis ATCC 8503] gi|256736308|gb|EEU49637.1| ribosomal protein L25, Ctc-form [Parabacteroides sp. D13] gi|262293951|gb|EEY81884.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_33B] gi|298265836|gb|EFI07496.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_19] gi|300833361|gb|EFK63979.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 20_3] Length = 194 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 11/193 (5%) Query: 3 QKECKLSAVMRDKV-----GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K +L R+ V K + + +RKN +IPA++YG ++ + + K +Y+ Sbjct: 1 MKTFELEGKGREIVARSADQKRALKAMRKNNEIPAVLYGGEK-VTHFTVTKEAVRKLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 ++ L I I KD Q PV+D ++H DFL+VS+ V + VPV Sbjct: 60 PEIF--VVELSIDGNKTMAIVKDMQFQPVTDEILHMDFLEVSKDKAVVMEVPVVLEGH-- 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL++ ++ + + IP+ +T++++ L +G ++ + + E M+ Sbjct: 116 AEGVKAGGKLSLQMRKLKVKAIYDQIPEKLTINVDHLGLGKTMQVGALHF-EGLELMNAK 174 Query: 178 NITIATIVAPISG 190 N + + + Sbjct: 175 NAVVCAVQLTRAA 187 >gi|253681485|ref|ZP_04862282.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] gi|253561197|gb|EES90649.1| ribosomal protein L25, Ctc-form [Clostridium botulinum D str. 1873] Length = 196 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A R K SAR RK G +P I+YG + +++K + K+ + L Sbjct: 4 LKAEERVKDSVHSARRERKKGMVPGILYGAGIQNLLFEIGELELNKEIL-KHGEHGGVNL 62 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +I + I K+ Q DPV+ +IH D +V+ V +P+ F E K+G + Sbjct: 63 EINNKQHQAIVKEVQKDPVTKKIIHVDLQEVNNEEIVQTEIPIVFTGEELIS--KRGDTI 120 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + + ++IP I +DL+ + GD + D+ + + + ++ +A I Sbjct: 121 QKEKSNIRVKGKYDDIPSCINIDLSRMSAGDVCRINDVEMANEIICLDDMDTILAVI 177 >gi|166033562|ref|ZP_02236391.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] gi|166026747|gb|EDR45504.1| hypothetical protein DORFOR_03288 [Dorea formicigenerans ATCC 27755] Length = 193 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + A + + L + N + + Sbjct: 3 TLKAEKRTLAVK--AKKLRREGYVTGNVFGKEMKESIPVKMDAAAVDRLLKTSN-KGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI E +V+ K+ +P+ + DF + + V + +N +K G Sbjct: 60 MLDIDGESHNVLIKEVDYNPLKGRVDEMDFQALVKDEVVHSVAEIVLVNHDKLE----SG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L EVS + + D + +D+ L+IGD+I ++D+ L + ++ T+ T Sbjct: 116 VLQQQLEEVSYKALPSALVDKVEIDVAKLRIGDTIKVKDLSLAQDKDVHLVTDPETTVVT 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|57235101|ref|YP_182157.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides ethenogenes 195] gi|109893358|sp|Q3Z6J2|RL25_DEHE1 RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|57225549|gb|AAW40606.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides ethenogenes 195] Length = 218 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 78/185 (42%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFM 61 L+ R G + LR G P I+G+ + + ++ S + + Sbjct: 1 MTGISLALNPRQVFGNK-NKFLRAQGITPVHIFGHGLKSLALQANTQELESTISRAGSSH 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L LD K+ ++ Q PV L H DF Q++ VT +P+ F + Sbjct: 60 LVSLKLDTDKKTRKAFIREIQRHPVKGYLQHVDFYQINLKEKVTAEIPIHF-SGESPLLK 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNIT 180 ++G KL +++ +++P I ++L+ + ++++DI LP +++ ++ Sbjct: 119 EKGHKLTAPFTHLTVEALPDDLPPEIHIELSQFDSPEKDLYIKDIVLPGNARILNEPDLL 178 Query: 181 IATIV 185 +A + Sbjct: 179 VAKVS 183 >gi|160892146|ref|ZP_02073149.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270296234|ref|ZP_06202434.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|317480855|ref|ZP_07939936.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] gi|156858624|gb|EDO52055.1| hypothetical protein BACUNI_04609 [Bacteroides uniformis ATCC 8492] gi|270273638|gb|EFA19500.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. D20] gi|316902940|gb|EFV24813.1| ribosomal protein L25 [Bacteroides sp. 4_1_36] Length = 196 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 QKECKLSAVMRDKVGKG-----SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 K ++ R + + + +RKN +P ++YG + + A+ + +Y+ Sbjct: 1 MKSIEVKGTARTIAERSSEQARALKAIRKNNGVPCVLYGAG-ENVHFTVPAEGLRNLVYT 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + ++ L I + V+ I KD Q PV D ++H DF Q+ E + + VPV+ Sbjct: 60 PHIY--VVDLVIDGKKVNAIMKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQME--GL 115 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 + G+K GGKL + ++ + N IP+ + +++ L +G ++ + +++ E ++ Sbjct: 116 AEGVKAGGKLVLQMRKLKVRALYNVIPERLIINVAHLGLGKTVKVGELQY-EGLELLNAK 174 Query: 178 NITIATI 184 + + Sbjct: 175 EAVVCAV 181 >gi|167948535|ref|ZP_02535609.1| 50S ribosomal protein L25/general stress protein Ctc [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 148 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 54/101 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +++A R GKG++R LR+ G +P IIYG +P I+L+ ++ L + F + I Sbjct: 21 SFEITAQPRSDTGKGASRRLRRTGMVPGIIYGGHQEPSMISLAHNELILHLDHEAFYSHI 80 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105 L L +G V+ KD Q P ++H DF ++S G + Sbjct: 81 LNLKVGDATEQVVLKDLQRHPAKPFIMHIDFQRISAGEKIP 121 >gi|310657484|ref|YP_003935205.1| 50S ribosomal protein L25 [Clostridium sticklandii DSM 519] gi|308824262|emb|CBH20300.1| putative 50S ribosomal protein L25 1 (General stress protein CTC 1) [Clostridium sticklandii] Length = 193 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 8/178 (4%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 RD+ A LRK IP ++YG+ D + + K+ K T +I + Sbjct: 5 KRDEK----AGALRKQDMIPGVVYGHGIDAISVKVPRKEFVKSYEKFR-QTKTFNCEIDQ 59 Query: 72 ELVHVIPKDYQLDPVSDI-LIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVV 130 V KD Q D ++ + H D L+VS + +P+ + +QG + Sbjct: 60 SPHQVYIKDVQRDVLNPEKITHFDLLKVSSSDKIHTRLPIVLLGRENIE--RQGLIVQQS 117 Query: 131 CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAPI 188 +++ + +SI +D+ + K GD + + DI++P+ + +++ +A+I P Sbjct: 118 LNDIDVKYQVGKGLESIEIDIVNFKDGDMLKVSDIKVPDYVDVLEDMDMLVASIAHPK 175 >gi|291296896|ref|YP_003508294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] gi|290471855|gb|ADD29274.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus ruber DSM 1279] Length = 206 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 7/183 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 E ++ A R G LR G++P ++Y N + + + K+ +K + I Sbjct: 2 EYRIKAQTR---GNEKPAALRDAGKLPGVVY-NRQENYKVVVDLKEFNKVFLAAGIHHVI 57 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + V + + LD H DF +S V + +P++ + G+++G Sbjct: 58 TLELENGKTVDTLVRQVNLDKRRRRPDHVDFYALS-DEPVLMWIPIKIE--GTAQGVREG 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L +V ++V + IP I VD++ L+IGDSIH ++RLP + + TI I Sbjct: 115 GVLQLVNNDVQVKVSPKAIPPHIEVDVSHLRIGDSIHANELRLPPGVTLAMNPSDTIVAI 174 Query: 185 VAP 187 V P Sbjct: 175 VPP 177 >gi|225873665|ref|YP_002755124.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] gi|225791486|gb|ACO31576.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC 51196] Length = 220 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 5/188 (2%) Query: 1 MDQKECKLSAVMRD-KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKN 59 M +E +SA R+ K K +AR +R G+IPA++YG P+ I L K I++ L+S+ Sbjct: 1 MITQEV-VSATPREGKFNKNAARRVRVRGRIPAVVYGAAEPPQAIELDPKQITRILHSET 59 Query: 60 FMTTILTLDIGKELVHV--IPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 +I L+IG + D+Q +P+ LIH D +++ + V VPV+ Sbjct: 60 GHNSIFDLEIGGVKTQTKAMIVDWQYEPIKGNLIHIDLKRIALDKPIRVSVPVQLTGTPV 119 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQL 177 QGG L+ V EV + C N+IP I VD+ +L G + + D+ +K +S Sbjct: 120 GVKT-QGGILDQVLREVEVECLPNDIPSHIDVDITELAFGTILRVADLPHGDKLKYISDE 178 Query: 178 NITIATIV 185 + T+A IV Sbjct: 179 SNTVAHIV 186 >gi|329917506|ref|ZP_08276486.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] gi|327544536|gb|EGF30044.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480] Length = 176 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 4/152 (2%) Query: 42 KPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 I+L + L + F ++IL L+I ++ V+ +D+Q+ +++HADF +V Sbjct: 1 MNISLDHNALYHALKKETFHSSILDLEIDGKVEKVLLRDFQVHAYKQLVLHADFQRVDAS 60 Query: 102 STVTVHVPVRFINENKSPGIKQGG-KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 + V VP+ FIN SP +K ++ V E+ + C ++P+ +TVDL L+IG SI Sbjct: 61 QKIHVKVPLHFINGEASPAVKMSAGIISHVVSELEVTCLPADLPEFLTVDLGALEIGSSI 120 Query: 161 HMEDIRLPEKTSSMS---QLNITIATIVAPIS 189 H+ D+++P + + N TIA P Sbjct: 121 HLADLQMPNGVTPVIHGGDDNPTIAAASVPAG 152 >gi|325283580|ref|YP_004256121.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] gi|324315389|gb|ADY26504.1| 50S ribosomal protein L25 [Deinococcus proteolyticus MRP] Length = 238 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 73/184 (39%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A R K G IPA+ Y N A+ K K + Sbjct: 1 MDINAKARKSGDKLE------QGMIPAVAY-NKEKNVSFAIERKVFDKIFREQGISGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E + K Q+D IH DF V+ G + VP+ KS G +GG Sbjct: 54 ISIDGAEAFPALVKTVQMDKRRREPIHVDFYMVTYGQAIEASVPLHTT--GKSQGEIEGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++V H V++L P IP I DL+ L IGD I ++LPE I + +I Sbjct: 112 LVDIVHHNVTVLAPGPRRIPQEIVADLSGLNIGDHIAAGQLQLPEGVELAMDPEINVISI 171 Query: 185 VAPI 188 + P Sbjct: 172 LPPR 175 >gi|291548563|emb|CBL24825.1| LSU ribosomal protein L25P [Ruminococcus torques L2-14] Length = 197 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD K A+ LR+ G + ++G D P+ +I K L ++ + Sbjct: 3 TLKAEKRDMSIK--AKKLRREGFVTGNLFGRELEDSIPLKFDKAEIEKLLKVES-KGGQV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ E + K+ +P+ + DF + V + +N K G Sbjct: 60 MLEVAGETYDALIKEVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLEKL----SSG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + E+S + + + VD+ LKIGD+I + D+ + + M+ L+ T+ T Sbjct: 116 VPQQMLQEISFKALPAALVEKVEVDVGPLKIGDTIRVADLPIAKDKDVDLMTDLDATVVT 175 Query: 184 IV 185 I Sbjct: 176 IT 177 >gi|153855422|ref|ZP_01996553.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] gi|149752076|gb|EDM62007.1| hypothetical protein DORLON_02567 [Dorea longicatena DSM 13814] Length = 197 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + + + L + + + + Sbjct: 3 TLKAEKRSMDIK--AKKLRREGYVTGNVFGREMKESVPVKMEKAAVDRLLKACH-KGSQV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LDI E ++V+ KD + +P+ + DF + V + + K G G Sbjct: 60 MLDIEGEKMNVLIKDVEFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVGHEKDAG----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L + EV + + D + VD++++K+GDSI ++D+ L + M+ T+ T Sbjct: 116 VLEQLLEEVQFKAYPSALVDKVEVDVSNMKVGDSIKVKDLTLSSDKDVDVMTDPETTVVT 175 Query: 184 IV 185 + Sbjct: 176 LQ 177 >gi|206895312|ref|YP_002247107.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] gi|206737929|gb|ACI17007.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus DSM 5265] Length = 211 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 7/173 (4%) Query: 6 CKLSAVMRDKV--GKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + + R + G + +RKNG +PA++YG + P+ L + S+ + + + Sbjct: 1 MAVKVIKRTETQTGTRKVKKIRKNGYVPAVLYGQDMEATPLLL---ERSQVIRERVTLGR 57 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQ 123 L LD+ ++V VI K+ Q+DP+S +IH DF +S GSTVTV +P+ + + GIK+ Sbjct: 58 SLELDVDGKIVRVIVKEEQVDPISQEVIHLDFQALSAGSTVTVSIPIVLV--GEPVGIKK 115 Query: 124 GGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 GG L E+ + P + + +TVD++++ IGD IH+ ++ LP + + Sbjct: 116 GGILEFPTREIEVELPTEKLVEQVTVDVSNMDIGDIIHIGELDLPPEAKIFAD 168 >gi|313683047|ref|YP_004060785.1| LSU ribosomal protein l25p [Sulfuricurvum kujiense DSM 16994] gi|313155907|gb|ADR34585.1| LSU ribosomal protein L25P [Sulfuricurvum kujiense DSM 16994] Length = 178 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + + R++G + A IYG + A D + + N T + Sbjct: 2 LEGIVRESIGKAATKAYRRDGYLIANIYGKGLENVHAAFKMNDFIRTVR--NKETVAFAV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++++ + Y+ PVS L+H D + G HVPV+ + G+K G L Sbjct: 60 KVDGKEMNLVVQGYESHPVSGNLLHVDLMVAQPGVVTHYHVPVKAV--GTPVGLKNKGML 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 V + + N+P SIT+D+ L +GDS+ + D+ E + +++ +I+ Sbjct: 118 FVAKKRLRVKAAIENLPTSITIDVAPLDLGDSVLVRDLPRVENVTFTDSDRVSVLSIIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|197301913|ref|ZP_03166977.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] gi|197298981|gb|EDY33517.1| hypothetical protein RUMLAC_00635 [Ruminococcus lactaris ATCC 29176] Length = 199 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A RD K A+ LR+ G + I+G + P+ + D+ K L +N + Sbjct: 3 TLKAEKRDMSIK--AKKLRREGFVTGCIFGREMKESIPLKMEKADVEKLLKVEN-KGGQV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P+ + DF + V + +N +K G Sbjct: 60 MLEVDGQTYDALIKEVDYNPLKGYVDEIDFQALVSNEKVHSVAEIHLVNLDKLAA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + E+S + + + VD+ DLK+GD+I + D+ + + M+ ++ T+ T Sbjct: 116 VPQQMLQEISFKALPAALVEKVEVDVGDLKVGDTIRVADLPIAKDKDVDLMTDVDATVVT 175 Query: 184 IV 185 I Sbjct: 176 IT 177 >gi|307721573|ref|YP_003892713.1| 50S ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] gi|306979666|gb|ADN09701.1| LSU ribosomal protein L25P [Sulfurimonas autotrophica DSM 16294] Length = 178 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG + A + + + N T + Sbjct: 2 LEGIVRESIGKKGTKALRRDGYLIANIYGKGLENINAAFKENEYIRTVR--NKDTLAFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 I ++V+ + Y+ PV+ L+H D + G VPV + ++ G+K G + Sbjct: 60 SINGNEMNVVVQSYESHPVTGKLLHVDLMVAQPGVVTHYMVPVEPV--GEAIGVKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 NV + + ++P +I +D+ D+ +GD+ + DI E + + +I+ Sbjct: 118 NVSKRRLRVKAKIEDLPKTIVIDVTDMDVGDAKLIRDIDASENVKFTDADRVAVLSIIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|149200624|ref|ZP_01877628.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] gi|149136298|gb|EDM24747.1| 50S ribosomal protein L25/general stress protein Ctc [Lentisphaera araneosa HTCC2155] Length = 197 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 5/186 (2%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ VGK ++ LR+ IP + G + I ++ KD+ + T I Sbjct: 2 SITLKAAKREIVGKK-SKKLRREAIIPGNLQGRKIENVNIQIAQKDLQVAIK-AAGTTNI 59 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LD+ V+ ++ +H +F V VPV+ + + I G Sbjct: 60 IELDVDGTKHEVLLREVLRTTNQQHFVHVEFYAPDMDVAVKTSVPVKVV--GDNKLITAG 117 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKI-GDSIHMEDIRLPEKTSSMSQLNITIAT 183 G L + L +P+ I VD++ L+ D I + + E +S +A Sbjct: 118 GILVTPQSNLELAALPKALPEFIEVDISSLQSFSDVITVASLPAIENVEYLSAPGTALAY 177 Query: 184 IVAPIS 189 I + Sbjct: 178 IAETRA 183 >gi|145352002|ref|XP_001420348.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580582|gb|ABO98641.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 239 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 16/195 (8%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSK---NFM 61 L +R G S+ R+ G++P +++ S+ I + ++++ + Sbjct: 37 VVLRCALRVDGGTASSTRARREGRVPGVVFAPGSERGTMITVCEREMNAAVRKHTLAGVA 96 Query: 62 TTILTLDIGKEL-----------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 + L++ V + K Q+ + ++ + FL+V + V V VPV Sbjct: 97 CEVFDLEVQTTTATGEESGETRRVRALAKQVQMHAYNQMVDNVCFLEVKPETEVKVRVPV 156 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 E+ SPG+K+GG + ++ V + C +++IP +D++ L G I + D+ +PE Sbjct: 157 ATQGEDVSPGVKRGGFVQIMRQTVPVRCRSDSIPKRFLMDVSTLDAGKVIKIGDVTVPEG 216 Query: 171 TSSMS-QLNITIATI 184 + LN+ + I Sbjct: 217 VKLLDADLNLPLVRI 231 >gi|315641812|ref|ZP_07896816.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] gi|315482487|gb|EFU73026.1| 50S ribosomal protein L25 [Enterococcus italicus DSM 15952] Length = 204 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 3/180 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L R+ + LR G+IPA++ G + I+L + +I K L + + T+ Sbjct: 2 SVSLEVSKREVRPRSLRNKLRHEGKIPAVVNGYQIESTTISLDSAEIEKVLRQ-HGLNTV 60 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 LT+ I + V+ + +Y D + L H +FL V+ V + ++ G++ G Sbjct: 61 LTMSIDGKKVNTLIHNYTTDTFTSKLTHIEFLSVNMNEVTEVE--AEVVLVGEAAGVRAG 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 G L + V++ + +P+++ VD+ DL+IG S+ + D+++ ++ + TI Sbjct: 119 GVLTQTLYSVTVAATPDKLPENVEVDVTDLEIGQSLSVADLKVDGDYEIITDAEEQVVTI 178 >gi|223889310|ref|ZP_03623897.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] gi|223885231|gb|EEF56334.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi 64b] Length = 163 Score = 104 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 3/165 (1%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 AR +R +IPA++YG D + + + + +K+ T+L LD GK V KD Sbjct: 1 ARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFT-DNTVLILDDGKLERCVFVKD 59 Query: 81 YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPA 140 + S ++ H DF +V + +VP++ I S G+K+GG L V+ +V + Sbjct: 60 VAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIGVKEGGILTVLKEQVKVRSLP 117 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 ++P+ I +DL + GDS+ ++D+ LP I+ Sbjct: 118 LDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 162 >gi|34811573|pdb|1PNU|T Chain T, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. gi|34811626|pdb|1PNY|T Chain T, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. gi|56966365|pdb|1VOR|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966418|pdb|1VOU|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966471|pdb|1VOW|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966524|pdb|1VOY|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966577|pdb|1VP0|W Chain W, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400 Length = 173 Score = 104 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 10/182 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L+A R K I A+ Y N + AL K + ++ Sbjct: 1 MELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQSTTGLFD 53 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 G E + K Q+D IH DF V+ G V V VPV +S G QGG Sbjct: 54 ITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTT--GRSQGEVQGG 111 Query: 126 KLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 +++V H + ++ P IP + VD+ + IGD I DI+LPE + + +T+ ++ Sbjct: 112 LVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSV 171 Query: 185 VA 186 + Sbjct: 172 LP 173 >gi|255562637|ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 253 Score = 104 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 23/202 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---MSDPKPIALSAKDISKRLYSK----- 58 + A+ R+ G A R G+IPA+++ +P ++S K + + Sbjct: 28 TIQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQSIL 87 Query: 59 ------NFMTTILTLDIGKELVHVIPKD--------YQLDPVSDILIHADFLQVSEGSTV 104 F +T L I + + D + +++ F+ +G+ + Sbjct: 88 TSVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIKVHRDEETGKILNLVFVWADDGTEL 147 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VP+ F E PG+K+GGKLN + + +LCPA +IP + VD++ L IGD + M D Sbjct: 148 KVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVSMGD 207 Query: 165 IRLPEKTSSMS-QLNITIATIV 185 + + +S NI I IV Sbjct: 208 VEVHPSLKLLSKNENIPICKIV 229 >gi|255537627|ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis] gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25, putative [Ricinus communis] Length = 252 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 16/194 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKN-- 59 + A+ R GK A RK G++P+I++ + + + I++ A I + Sbjct: 47 TIEAIPRATSGKSIAVKERKAGRVPSIVFEQENGQHGGNKRLISVQANQIRNMINKLGRS 106 Query: 60 -FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L++ E V V+P+ L +SD I+ F++ + + V VP+ Sbjct: 107 FFLSKLFNLEVRPEFGSDEIIEKVRVLPRLVHLHAISDTPINVTFIRAPSDAWLKVDVPL 166 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 + E+ SPG+++G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 167 VYRGEDVSPGLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPS 226 Query: 171 TSSMSQLNITIATI 184 + ++ + I Sbjct: 227 LKLIQPEDLPVVKI 240 >gi|164686888|ref|ZP_02210916.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] gi|164604278|gb|EDQ97743.1| hypothetical protein CLOBAR_00484 [Clostridium bartlettii DSM 16795] Length = 192 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFM 61 + + R + GK +R G++PAI+YG + P P ++ +++ Sbjct: 1 MQNAVFNITERTEKGK----KVRMKGEVPAIMYGQSLEKPIPCQITKRELI---DLLASD 53 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +++L+L + ++ + + K+ Q D ++H DF V +G +V + VPVRF Sbjct: 54 SSVLSLKLNDKVENCVLKEVQRDAF-GNIVHLDFQYVKKGDSVKLKVPVRFAGTESLDAR 112 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + V EV L + +P+ I V++ L+ G I +D+ +PE + Sbjct: 113 RLLLDDIVT--EVQLQGNPSEMPEHIEVNVEGLEHGAQILAKDLVIPETLKMDLDPETVV 170 Query: 182 ATI 184 A I Sbjct: 171 ARI 173 >gi|270308609|ref|YP_003330667.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] gi|270154501|gb|ACZ62339.1| ribosomal protein L25 (general stress protein Ctc) [Dehalococcoides sp. VS] Length = 218 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFM 61 L+ R G +LLR G P I+G+ + + + S + + Sbjct: 1 MTGISLALNSRQIFGNK-NKLLRAQGLTPVHIFGHGLPSLALQANTLELESTINRAGSSH 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + LD K+ ++ Q P+ L H DF Q++ VT +P+ F + Sbjct: 60 LVNIKLDTDKKTRKAFIREIQRHPIKGYLQHVDFYQINLKEKVTAEIPIHF-SGESPLLK 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNIT 180 ++G KL +++ +++P I +DL+ + ++++DI LP K +++ ++ Sbjct: 119 EKGHKLTAPFTHLTVEALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGKARILNEPDLL 178 Query: 181 IATIV 185 +A + Sbjct: 179 VAKVS 183 >gi|152993638|ref|YP_001359359.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurovum sp. NBC37-1] gi|151425499|dbj|BAF73002.1| 50S ribosomal protein L25 [Sulfurovum sp. NBC37-1] Length = 178 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 4/178 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK +A+ LR++G + A +Y N + A + + + N + + Sbjct: 2 LEGIVRESIGKTTAKKLRRDGYLTANLYANGVENIQAAFKRGEFMRAVR--NKDSLAFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + ++V+ ++YQL PV ++H D G VPV + G+K G L Sbjct: 60 KVGDKELNVVIQEYQLHPVHGEVVHVDLRITVPGQVTDFLVPV--VTHGTPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V + N+P +++ L DS+ + DI +P M + ++ + ++ Sbjct: 118 VMSKRRVKVRGAIENMPAKFDLNVEPLNRDDSLLIRDIEVPANCKMMDRPDVAVCGVI 175 >gi|73749132|ref|YP_308371.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. CBDB1] gi|147669894|ref|YP_001214712.1| 50S ribosomal protein L25/general stress protein Ctc [Dehalococcoides sp. BAV1] gi|289433106|ref|YP_003462979.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] gi|109893359|sp|Q3ZYZ2|RL25_DEHSC RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|189042353|sp|A5FPN6|RL25_DEHSB RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|73660848|emb|CAI83455.1| ribosomal protein L25 (General stress protein Ctc) [Dehalococcoides sp. CBDB1] gi|146270842|gb|ABQ17834.1| LSU ribosomal protein L25P [Dehalococcoides sp. BAV1] gi|288946826|gb|ADC74523.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dehalococcoides sp. GT] Length = 218 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 4/185 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFM 61 L+ R G +L+R G P I+G+ + + S + + Sbjct: 1 MTGISLALKPRQVFGNK-NKLIRAQGLTPVHIFGHGLKSLALQADTLELESTINRAGSSH 59 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + LD K+ V ++ Q +P+ L H DF Q++ VT +P+ F + S Sbjct: 60 LVNIKLDTDKKTRKVFIREIQRNPIKGYLEHVDFYQINLKEKVTAEIPIHF-SGESSLLK 118 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDS-IHMEDIRLPEKTSSMSQLNIT 180 ++G KL +++ +++P I +DL+ + ++++DI LP +++ ++ Sbjct: 119 EKGHKLIAPFTHLTVEALPDDLPPEIHIDLSQFDTLEKDLYIKDIILPGGAKILNEADLL 178 Query: 181 IATIV 185 +A + Sbjct: 179 VAKVS 183 >gi|283797259|ref|ZP_06346412.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] gi|291075109|gb|EFE12473.1| ribosomal protein L25, Ctc-form [Clostridium sp. M62/1] Length = 193 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + + Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKADAERLLK-TSGRGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 60 MLNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVT----TG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|291277022|ref|YP_003516794.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] gi|290964216|emb|CBG40065.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae 12198] Length = 178 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L +R+ + K + LR +G + A IYG + A D + + SK + + Sbjct: 2 LEGKVRESISKAEVKALRNDGYLIANIYGKGVENIHCAFKLNDFIRTIKSKT--HLVFPV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G +++ V+ ++YQ DPV+ ++H D + +G +PV+ + G+K G L Sbjct: 60 SVGGKMLDVVVQEYQKDPVTSNILHVDLMLAQKGVVAKYKIPVKAV--GVPVGLKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 VS+ ++ + +D++ L +GDSI + D+ M + ++ I ++ Sbjct: 118 IYPKKRVSVQAAPEHLINVYELDVSKLDVGDSILVRDLPEHPNIKVMEKPSVAIVGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|227542458|ref|ZP_03972507.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181656|gb|EEI62628.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY ++P D++ + + Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYSKDTEPVHFTTDRLDLTSIVR-NHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ +DI E + K + +S + H D L + G V V VPV + E Sbjct: 60 TNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEVEVPVVYEGEPAPGA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + + +IPD +TV + L+IG I DI L + + + + ++ Sbjct: 120 L-----VFQEVDTLRIESDVLSIPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDLL 174 Query: 181 IATIV 185 I IV Sbjct: 175 IINIV 179 >gi|227487817|ref|ZP_03918133.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092319|gb|EEI27631.1| stress induced RNA binding ribosomal protein L25p family protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K LSA R++ GKG+AR R+ G +P +IY ++P D++ + + Sbjct: 1 MANKALDLSANPRNEFGKGAARRARRAGLVPGVIYSKDTEPVHFTTDRLDLTSIVR-NHG 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ +DI E + K + +S + H D L + G V V VPV + E Sbjct: 60 TNAVVDVDIEGEKHLTLIKHIDQNVLSLEIDHVDLLAIKRGEKVEVEVPVVYEGEPAPGA 119 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + + +IPD +TV + L+IG I DI L + + + + ++ Sbjct: 120 L-----VFQEVDTLRIESDVLSIPDELTVSVEGLEIGSQITAADIVLEDGATLVDEDDLL 174 Query: 181 IATIV 185 I IV Sbjct: 175 IINIV 179 >gi|295115799|emb|CBL36646.1| LSU ribosomal protein L25P [butyrate-producing bacterium SM4/1] Length = 193 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + + Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKVDAERLLK-TSGRGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 60 MLNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVT----TG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|295092382|emb|CBK78489.1| LSU ribosomal protein L25P [Clostridium cf. saccharolyticum K10] Length = 193 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G PI + D + L + + + Sbjct: 3 TLKAEKRSMDVK--AKRLRREGFVTGNVFGKEIKGSIPIKIVKVDAERLLK-TSGRGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + V+ K+ + + + DF + G V + +N K G Sbjct: 60 MLNVDGQDMDVLIKEVDYNSMKGQVEEIDFQALVSGEKVHSVAEIHLLNHEKVT----TG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 L V HEVS + + + I +D+ D+++GDSI + D+ + + + L+ + T Sbjct: 116 VLQQVLHEVSYRALPSALVEKIELDVGDMRVGDSIKVRDLAIASDKDVDLQTDLDAVVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VYA 178 >gi|297799630|ref|XP_002867699.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] gi|297313535|gb|EFH43958.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp. lyrata] Length = 257 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 16/195 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----G-NMSDPKPIALSAKDISKRLYSKN-- 59 + AV R GK + RK G++P+II+ G + + + I++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 60 -FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +++ E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIV 185 + + I + Sbjct: 233 LKLIKSKDEPIVKVA 247 >gi|15236554|ref|NP_194093.1| 50S ribosomal protein-related [Arabidopsis thaliana] gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis thaliana] gi|7269210|emb|CAB79317.1| putative protein [Arabidopsis thaliana] gi|18253005|gb|AAL62429.1| putative protein [Arabidopsis thaliana] gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis thaliana] gi|21594031|gb|AAM65949.1| unknown [Arabidopsis thaliana] gi|332659385|gb|AEE84785.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 264 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 16/195 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----G-NMSDPKPIALSAKDISKRLYSKN-- 59 + AV R GK + RK G++P+II+ G + + + I++ I K + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 60 -FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +++ E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIV 185 + + I + Sbjct: 233 LKLIKSKDEPIVKVA 247 >gi|242057875|ref|XP_002458083.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] gi|241930058|gb|EES03203.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor] Length = 264 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PA+++ G K +++ +K I K + Sbjct: 59 ILAVPRASSGRHVAAKERKAGRVPAVVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 118 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 119 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 178 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 179 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 238 Query: 171 TSSMSQLNITIATIVAPIS 189 + + I I+ + Sbjct: 239 LKLLQSPDQPICNIIGSRA 257 >gi|225470469|ref|XP_002263685.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 251 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIY------GNMSDPKPIA---------- 45 + A+ R+ G + R G+IPA+++ G + + ++ Sbjct: 30 AAAYHTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNMNGRSVSRKRLLTTERK 89 Query: 46 -LSAKDISKRLYSKNFMTTILTLDIGK------ELVHVIPKDYQLDPVSDILIHADFLQV 98 + A S T L + G E V+P D + +++ F Sbjct: 90 QIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWA 149 Query: 99 SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 EGS + V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD Sbjct: 150 DEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGD 209 Query: 159 SIHMEDIRLPEKTSSMSQLNI-TIATIVAPI 188 I M D+ + +S+ + IVA Sbjct: 210 RILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240 >gi|302144151|emb|CBI23278.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIY------GNMSDPKPIA---------- 45 + A+ R+ G + R G+IPA+++ G + + ++ Sbjct: 30 AAAYHTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNINGRSVSRKRLLTTERK 89 Query: 46 -LSAKDISKRLYSKNFMTTILTLDIGK------ELVHVIPKDYQLDPVSDILIHADFLQV 98 + A S T L + G E V+P D + +++ F Sbjct: 90 QIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWA 149 Query: 99 SEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD 158 EGS + V VP+ F E+ PG+K+GG LN + + LCPA +IP I VD+++L IGD Sbjct: 150 DEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGD 209 Query: 159 SIHMEDIRLPEKTSSMSQLNI-TIATIVAPI 188 I M D+ + +S+ + IVA Sbjct: 210 RILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240 >gi|323702322|ref|ZP_08113988.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] gi|323532812|gb|EGB22685.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfotomaculum nigrificans DSM 574] Length = 188 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 9/185 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFM 61 E L A+ R + A R+ G P +IYG + I + + L + + Sbjct: 1 MSELLLRAIERTEK----ANKARRKGFAPGVIYGEGMAEGLCIKFEMNKLLRVLKN-HRE 55 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + IG+ + I K+ Q D ++ ++H D V++ TV V +PV F K+ Sbjct: 56 GAKVQVKIGEHIKQCIVKEVQRDSITGKVLHIDLQTVTDNDTVRVKIPVLFK--GKNRLE 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED-IRLPEKTSSMSQLNIT 180 ++ L V EV + N +P+ ITVD+ + ++GD I + D +++ ++ +++ + Sbjct: 114 EKKLLLQVFLPEVEVAGKVNLLPEFITVDVENKELGDKITVRDLLKVNDEIKILNEEDDI 173 Query: 181 IATIV 185 +A + Sbjct: 174 LAVVS 178 >gi|303239071|ref|ZP_07325601.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] gi|302593409|gb|EFL63127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetivibrio cellulolyticus CD2] Length = 191 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 8/176 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILT 66 L A+ R K SA+ +RK G +P IYG+ D I + K+I++ L + + Sbjct: 5 LDAMER----KESAKRIRKLGYVPCSIYGSGVDRNMDIQIEDKEINRFLK-SHSIGAKAK 59 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + I + + K Q +P+S +H +F SE V V VP +F + + Sbjct: 60 VKINASELPCVIKSIQYEPISSKPMHIEFYASSEDKLVKVKVPFKFKGKEQL--FSNKLV 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 LN++ E+ + ++P+ + ++++ +K G I MEDI LPE +S+ + + Sbjct: 118 LNILEDEIEIQGVLKDLPEFVEINVSLMKDGSVITMEDIALPEGIRLLSRKDEVVV 173 >gi|125526661|gb|EAY74775.1| hypothetical protein OsI_02667 [Oryza sativa Indica Group] Length = 271 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K +++ +K I K + Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 245 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 246 LKLLQSPEQPICSIIGSRA 264 >gi|186701238|gb|ACC91264.1| 50S ribosomal protein [Capsella rubella] Length = 257 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 16/195 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSDPKPIALSAKDISKRLYSKN 59 + AV R GK + RK G++P+II+ G + + + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIRKLVTHLGYS 112 Query: 60 FM---------TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F + D E V +P+ L +D ++ F++ G+ + V +P+ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPL 172 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG + M D+++ Sbjct: 173 VFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPA 232 Query: 171 TSSMSQLNITIATIV 185 + + I I Sbjct: 233 LKLIKPKDEPIVKIA 247 >gi|115438116|ref|NP_001043461.1| Os01g0593500 [Oryza sativa Japonica Group] gi|113532992|dbj|BAF05375.1| Os01g0593500 [Oryza sativa Japonica Group] gi|125571028|gb|EAZ12543.1| hypothetical protein OsJ_02444 [Oryza sativa Japonica Group] Length = 271 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K +++ +K I K + Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 245 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 246 LRLLQSPEQPICSIIGSRA 264 >gi|303284975|ref|XP_003061778.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457108|gb|EEH54408.1| predicted protein [Micromonas pusilla CCMP1545] Length = 254 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 8/191 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDIS-----KRLYSKNFM 61 + +RD G+ +A+ LRK G++PAI++ + I+L+ KDI Sbjct: 64 IDVRLRDASGRIAAKKLRKEGRVPAILFRSGSRAGEHISLALKDIERLVTKHGHVGVGTR 123 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + VI K L + ++ +A F+ V + V V VPV FI E+ PG+ Sbjct: 124 VLKMRFEGTDRAEDVIAKQVHLTMGTGVVENATFMPVEPTTEVNVDVPVTFIGEDVCPGV 183 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS-MSQLNIT 180 KQGG V+ V + C +IP +D+++ +G + ++D+ +PE + + Sbjct: 184 KQGGFPWVMRRSVPVKCQVKDIPRVFNIDVSNFSVGKVVFLKDLHVPESVKLRLDNMMTP 243 Query: 181 IATIVAP-ISG 190 + ++ P G Sbjct: 244 VFSMSRPGRGG 254 >gi|115462913|ref|NP_001055056.1| Os05g0270000 [Oryza sativa Japonica Group] gi|55168097|gb|AAV43965.1| unknown protein [Oryza sativa Japonica Group] gi|113578607|dbj|BAF16970.1| Os05g0270000 [Oryza sativa Japonica Group] gi|125551610|gb|EAY97319.1| hypothetical protein OsI_19240 [Oryza sativa Indica Group] gi|215704308|dbj|BAG93148.1| unnamed protein product [Oryza sativa Japonica Group] Length = 265 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K +++ +K I K + Sbjct: 60 ILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 119 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 120 FLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 179 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI ++ SPG+++G N + V LCPA+ +P I VDL++L +G + M D+++ Sbjct: 180 MFIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 239 Query: 171 TSSMSQLNITIATIVAPIS 189 + I +I+ + Sbjct: 240 LKLLQSPEQPICSIIGSRA 258 >gi|118474948|ref|YP_891538.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter fetus subsp. fetus 82-40] gi|118414174|gb|ABK82594.1| ribosomal protein L25, Ctc-form [Campylobacter fetus subsp. fetus 82-40] Length = 178 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K S + LRK+G + A IY + A D K + K+ + Sbjct: 2 LEGIVRESIDKRSTKALRKDGYLIANIYAKGVENINAAFKVNDFIKAVKVKS--DLKFQV 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 +G + V+ DYQ PV+ L H D V + +PV G K G L Sbjct: 60 SVGGKTYDVVVVDYQKHPVTSALKHVDLKVVLDDEVSKYMIPV--KPFGTPIGFKNKGVL 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 +++ C ++ +S VD++ L + D+I + DI+ + + + ++ Sbjct: 118 LQSKKRLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIKTVPGVRILDADRVAVLGVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|255283668|ref|ZP_05348223.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] gi|255265733|gb|EET58938.1| ribosomal protein L25, Ctc-form [Bryantella formatexigens DSM 14469] Length = 195 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ ++ KD + L + N + + Sbjct: 3 TLKAEKRSLDTK--AKKLRREGYVTGNVFGKELKESIPVQITKKDAERLLKTCN-KGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ K+ + + + DF + G V V +N K G Sbjct: 60 MLDVEGRKLDVLIKEIDYNSMKRQIDEIDFQALVSGEEVHSVAEVVLLNHEKVV----NG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 + + HE++ + D + +++ ++KIGD++ ++D+ + EK M+ + T Sbjct: 116 LIQLKLHEIAYKAVPEALVDKVEINMENMKIGDTVLVKDLDIASNEKIHLMTDPEAVVVT 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|89893488|ref|YP_516975.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense Y51] gi|219666815|ref|YP_002457250.1| 50S ribosomal protein L25/general stress protein Ctc [Desulfitobacterium hafniense DCB-2] gi|122483720|sp|Q24ZL1|RL25_DESHY RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|254801043|sp|B8FW28|RL25_DESHD RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|89332936|dbj|BAE82531.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537075|gb|ACL18814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfitobacterium hafniense DCB-2] Length = 179 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 7/186 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E + AV R + K +R G +P +IYG D + K ++K L ++ Sbjct: 1 MSETAIQAVERKEKPK----EVRSKGFVPGVIYGKGMDSISVKFDEKRLNKALQGRS-QK 55 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +++ + E + Q D S IH V + V + VP+ F + Sbjct: 56 AKISVQVAGETKQCFVGEIQKDITSGKTIHISMQVVEDDQVVKMKVPITFGGSEALS--E 113 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + + E+ L P+ +IP+ + VD+ D +GD I + D + S + IA Sbjct: 114 RKLIVLPYFSELELTGPSADIPEYVAVDVADKSLGDKITVADFMVSPSVSVLDDPEKIIA 173 Query: 183 TIVAPI 188 I Sbjct: 174 AITGAR 179 >gi|330887871|gb|EGH20532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 143 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 5/129 (3%) Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 I+ L++G + +VI K Q P ++HADF++V G +T VP+ F+NE +K Sbjct: 2 HIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEEAP--VK 59 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM---SQLNI 179 +GG+++ E+ + C ++P+ I VDL L++GD++H+ +++ P+ + ++ Sbjct: 60 KGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTDL 119 Query: 180 TIATIVAPI 188 IA + AP Sbjct: 120 AIANVHAPR 128 >gi|78776666|ref|YP_392981.1| 50S ribosomal protein L25/general stress protein Ctc [Sulfurimonas denitrificans DSM 1251] gi|109893404|sp|Q30TD5|RL25_SULDN RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|78497206|gb|ABB43746.1| LSU ribosomal protein L25P [Sulfurimonas denitrificans DSM 1251] Length = 178 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ +GK + LR++G + A IYG A + + + N T + Sbjct: 2 LEGIIRESIGKKGTKALRRDGYLIANIYGKGLQNLHAAFKENEYIRTVR--NKETLSFPI 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + ++V+ + Y+ PV+ L+H D + HVPV + E + G+K G + Sbjct: 60 KVDSKEMNVVVQAYEAHPVTGKLLHVDLMVAQPNVVTHYHVPV--VTEGDAIGLKNKGLI 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 ++ + + N P+SI VD+ + +GD+ + DI + +++ +++ Sbjct: 118 HISKPRLRVKATIENTPNSIVVDVTKMDVGDAKMVRDIAKIANVTFTDADRVSVLSVIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|308809493|ref|XP_003082056.1| putative protein (ISS) [Ostreococcus tauri] gi|116060523|emb|CAL55859.1| putative protein (ISS) [Ostreococcus tauri] Length = 218 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 10/189 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS---------DPKPIALSAKDISKRLYS 57 +L+ R GKG A R+ G++PA+++ S + + A + Sbjct: 23 RLTCETRAGTGKGIAGRTRREGRVPAVLFRPGSVEKTLLTASERELNAAVRRHTLAGTQC 82 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENK 117 + F + D +V + K + + + + FL+V + V V VPV + E+ Sbjct: 83 EVFELEVTDGDGTPRIVRALAKQVHMHAYNKSVENVCFLEVEPETEVRVRVPVETLGEDV 142 Query: 118 SPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-Q 176 SPG+K+GG + ++ V + C +++IP TVD++ L G I + D+++ E + Sbjct: 143 SPGVKRGGFVQILRKTVPVKCRSDSIPKKFTVDVSALDAGKIIRIRDVKVAEGIKLLDAN 202 Query: 177 LNITIATIV 185 L++ + I Sbjct: 203 LDLPLIIIA 211 >gi|167627805|ref|YP_001678305.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189042358|sp|B0TZF1|RL25_FRAP2 RecName: Full=50S ribosomal protein L25 gi|167597806|gb|ABZ87804.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 96 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 51/96 (53%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F + Sbjct: 1 MANFSLKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +TL+I + VI K Q P L+HADF++V Sbjct: 61 SEITLEIDGQEERVIIKALQRHPYKVKLVHADFMRV 96 >gi|325187175|emb|CCA21716.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] gi|325187320|emb|CCA21859.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14] Length = 258 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 9/189 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP----KPIALSAKDISKRLYSK 58 + L +R + G +AR LRK G +P ++YG + ++L K + Sbjct: 34 TESIVLPLHIRTQDGSRAARKLRKKGYLPGLLYGEGMNGDDTKVLVSLEKKLFDRLHRKL 93 Query: 59 NFMTTILTLDI---GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 + + + I +D Q PV+DI + +F++ G V +P+ +INE Sbjct: 94 WTSIDNQVFKVQVKDQPPILAIMRDVQFHPVTDIPLTVNFIRYKNGRK--VSIPITYINE 151 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS 175 SPGIK+GG +N + HEV +P ++ +D+N L + +E I P+ + Sbjct: 152 EGSPGIKRGGYINHIYHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDGVVPVV 211 Query: 176 QLNITIATI 184 +A + Sbjct: 212 PAGTLLANL 220 >gi|241668366|ref|ZP_04755944.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876899|ref|ZP_05249609.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842920|gb|EET21334.1| 50S ribosomal protein L25 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 96 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 51/96 (53%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L AV R+ +G G++R LR+ G+IPA+IYG + I L + K F + Sbjct: 1 MANFSLKAVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +TL+I + VI K Q P L+HADF++V Sbjct: 61 SEITLEIDGQEEKVIIKALQRHPYKVKLVHADFMRV 96 >gi|56707795|ref|YP_169691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670266|ref|YP_666823.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118497599|ref|YP_898649.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida U112] gi|134302021|ref|YP_001121990.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|187931857|ref|YP_001891842.1| 50S ribosomal protein L25 [Francisella tularensis subsp. mediasiatica FSC147] gi|195536299|ref|ZP_03079306.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208779400|ref|ZP_03246746.1| ribosomal L25p family [Francisella novicida FTG] gi|224456866|ref|ZP_03665339.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|254369280|ref|ZP_04985292.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|254370293|ref|ZP_04986298.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254372963|ref|ZP_04988452.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida GA99-3549] gi|254374414|ref|ZP_04989896.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|254874608|ref|ZP_05247318.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|71153143|sp|Q5NH01|RL25_FRATT RecName: Full=50S ribosomal protein L25 gi|123169478|sp|Q14IF3|RL25_FRAT1 RecName: Full=50S ribosomal protein L25 gi|166223682|sp|A0Q6N0|RL25_FRATN RecName: Full=50S ribosomal protein L25 gi|166223683|sp|A4IY68|RL25_FRATW RecName: Full=50S ribosomal protein L25 gi|226736324|sp|B2SH55|RL25_FRATM RecName: Full=50S ribosomal protein L25 gi|56604287|emb|CAG45308.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320599|emb|CAL08691.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis FSC198] gi|118423505|gb|ABK89895.1| 50S ribosomal protein L25 [Francisella novicida U112] gi|134049798|gb|ABO46869.1| ribosomal protein L25 [Francisella tularensis subsp. tularensis WY96-3418] gi|151568536|gb|EDN34190.1| hypothetical protein FTBG_00046 [Francisella tularensis subsp. tularensis FSC033] gi|151570690|gb|EDN36344.1| 50S ribosomal protein L25 [Francisella novicida GA99-3549] gi|151572134|gb|EDN37788.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548] gi|157122230|gb|EDO66370.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FSC022] gi|187712766|gb|ACD31063.1| 50S ribosomal L25p family [Francisella tularensis subsp. mediasiatica FSC147] gi|194372776|gb|EDX27487.1| ribosomal L25p family protein [Francisella tularensis subsp. novicida FTE] gi|208745200|gb|EDZ91498.1| ribosomal L25p family [Francisella novicida FTG] gi|254840607|gb|EET19043.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158969|gb|ADA78360.1| 50S ribosomal protein L25 [Francisella tularensis subsp. tularensis NE061598] gi|332678303|gb|AEE87432.1| LSU ribosomal protein L25p [Francisella cf. novicida Fx1] Length = 96 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F + Sbjct: 1 MANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +TLDI + VI K Q P LIHADF++V Sbjct: 61 SEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|226499442|ref|NP_001141875.1| hypothetical protein LOC100274018 [Zea mays] gi|194706262|gb|ACF87215.1| unknown [Zea mays] Length = 258 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 17/199 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K I++ A I K + Sbjct: 58 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSF 117 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 118 FLSRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 177 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 FI E+ SPG+++G N + LCPA+ +P I VDL++L +G + M D+++ Sbjct: 178 MFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPA 237 Query: 171 TSSMSQLNITIATIVAPIS 189 + + I S Sbjct: 238 LKLLHSPDQPICNFTGSRS 256 >gi|224053837|ref|XP_002298004.1| predicted protein [Populus trichocarpa] gi|222845262|gb|EEE82809.1| predicted protein [Populus trichocarpa] Length = 231 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 16/195 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----G-NMSDPKPIALSAKDISKRLYSKN-- 59 + A+ R GK + RK G++P+I++ G + + + I++ I + Sbjct: 27 TIFAIPRSDSGKNVSAKERKAGRVPSIVFEQEDGQHGGNKRLISVKKNRIRNLVNELGRP 86 Query: 60 -FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + LD+ + V V+PK L +D ++ F++ + + V +P+ Sbjct: 87 FFLSRLFELDVRPQFESDEVIEKVRVLPKAIHLHAGTDEPLNVTFIRAPSHALLKVDIPL 146 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 F E+ SPG+++G LN + V +CPA+ IP I VDL++L +G + M D+++ Sbjct: 147 VFRGEDISPGLRKGAYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKVHPA 206 Query: 171 TSSMSQLNITIATIV 185 + + + I Sbjct: 207 LKLVQSKELPVVKIS 221 >gi|328675846|gb|AEB28521.1| LSU ribosomal protein L25p [Francisella cf. novicida 3523] Length = 96 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F + Sbjct: 1 MANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +TLDI + VI K Q P LIHADF++V Sbjct: 61 SEITLDIDGKEEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|291546340|emb|CBL19448.1| ribosomal protein L25, Ctc-form [Ruminococcus sp. SR1/5] Length = 195 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 14/184 (7%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ K A+ LR+ G + I+ G +P + + +K + N T Sbjct: 2 ITLKAEKRNPNVK--AKKLRREGYVTGILSGKEMKEPVALQFDGAEAAKFIK-ANKEGTQ 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI E V + K+ +P+ L+ DF + G V+ V V+ + + G Sbjct: 59 IYLDIEGEKVDALVKNIDYNPIEKQLMALDFQALVAGEKVSTTVAVKLEHTDMVQG---- 114 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDL--KIGDSIHMEDIRLPEK--TSSMSQLNIT 180 + E+ N+ D+I +D N + D IH++D+ +PE ++ + Sbjct: 115 -IVEQEMEEIHYKADPANLLDTIVIDFNGYPADVRD-IHVKDLPIPEGKQVHFITPEDAV 172 Query: 181 IATI 184 + I Sbjct: 173 VVHI 176 >gi|253579435|ref|ZP_04856705.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849533|gb|EES77493.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 198 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 10/175 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + + K L + N + + Sbjct: 3 TLKAEKRTMDTK--AKRLRREGYVTGNVFGREMEGSLPVKIEKSAVEKLLKTNN-KGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ K+ Q +P+ + DF + V + +N +K G Sbjct: 60 MLDVDGQSYDVLIKEIQFNPLKGQVDEIDFQALVSNEKVHSVAEIVLVNHDKLEA----G 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLN 178 L E+S + + D I VD+ D+K+GD I ++D+ + + + L Sbjct: 116 VLQQHLEEISFRALPSALVDKIMVDVGDMKVGDVIKVKDLAIAQDKDVDLKTDLE 170 >gi|225028646|ref|ZP_03717838.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] gi|224954032|gb|EEG35241.1| hypothetical protein EUBHAL_02925 [Eubacterium hallii DSM 3353] Length = 194 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 LSA RD K A+ LR+ G + ++G + P+ + K+ + L + N + L Sbjct: 3 TLSAEKRDMQIK--AKKLRREGFVTGNVFGKNMEGSMPLKIEKKEAERILRTCN-KGSQL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L + + + V+ K+ + + ++ DF + +G V V +N K + G Sbjct: 60 ILTVEGQKMPVLLKEIDYNAMKHEIVEMDFQALVKGEKVHSVAEVVLLNHEKV----KSG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + ++ E+S N+ + + +DL+ GD+I ++D+ + E + T+ Sbjct: 116 VVELLLEEISYEALPENLIEKVEIDLDGKTAGDTIRVKDLPIATAEGIHLKTNPEETVVQ 175 Query: 184 IV 185 + Sbjct: 176 VT 177 >gi|89256299|ref|YP_513661.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115314748|ref|YP_763471.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|156502367|ref|YP_001428432.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367634|ref|ZP_04983655.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|290953135|ref|ZP_06557756.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|295313663|ref|ZP_06804247.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica URFT1] gi|109893364|sp|Q2A3P1|RL25_FRATH RecName: Full=50S ribosomal protein L25 gi|122325232|sp|Q0BM50|RL25_FRATO RecName: Full=50S ribosomal protein L25 gi|166223681|sp|A7NBX3|RL25_FRATF RecName: Full=50S ribosomal protein L25 gi|89144130|emb|CAJ79389.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica LVS] gi|115129647|gb|ABI82834.1| ribosomal protein L25 [Francisella tularensis subsp. holarctica OSU18] gi|134253445|gb|EBA52539.1| 50S ribosomal protein L25 [Francisella tularensis subsp. holarctica 257] gi|156252970|gb|ABU61476.1| Ribosomal L25p family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 96 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L A R+ +G G++R LR+ G+IPA+IYG + + L + K F + Sbjct: 1 MANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKEFFS 60 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + +TLDI + VI K Q P LIHADF++V Sbjct: 61 SEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 96 >gi|254519678|ref|ZP_05131734.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] gi|226913427|gb|EEH98628.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium sp. 7_2_43FAA] Length = 188 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 7/184 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFM 61 R+ K + LRK GQIP IIYG D PI + ++ + L N Sbjct: 7 MSNLAFKVYERNV--KANQSKLRKTGQIPGIIYGEFLDHTIPIKMCNAELRRMLRKNN-S 63 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I+ +++ + + + KD Q + + ++H DF + + + +P++ I + Sbjct: 64 GSIIEVELDDKKFNCVVKDVQKNNL-HEIVHVDFQYIKPNEVIKMRIPIKIIGQENLESR 122 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + + ++ IP+SI ++++D+ + D + +EDI +PE + ++ + Sbjct: 123 RLTLETHNLFIDLQGNV--EKIPESIEINVSDMNVDDKVLIEDIVIPEDITILTDPKTLL 180 Query: 182 ATIV 185 A + Sbjct: 181 AVVS 184 >gi|57339950|gb|AAW49962.1| hypothetical protein FTT0675 [synthetic construct] Length = 131 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 51/97 (52%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + L A R+ +G G++R LR+ G+IPA+IYG + + L + K F Sbjct: 26 EMANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFF 85 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ +TLDI + VI K Q P LIHADF++V Sbjct: 86 SSEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV 122 >gi|224096802|ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|222853645|gb|EEE91192.1| predicted protein [Populus trichocarpa] Length = 261 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 23/203 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGN---MSDPKPIALSAKD-----------IS 52 + A+ R+ VG + R+ G+IPA+++ +P S K I Sbjct: 32 TIQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQILAIL 91 Query: 53 KRLYSKNFMTTILTLDIGKELVHVIPKD--------YQLDPVSDILIHADFLQVSEGSTV 104 K + F +T L I + + D + +++ F EG+ + Sbjct: 92 KSVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWADEGTEM 151 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VPV F E PG+K+GG L ++ + LCPA +IP I VD+++L I D + M D Sbjct: 152 KVDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDGLFMRD 211 Query: 165 IRLPEKTSSMS-QLNITIATIVA 186 I + +S N+ + IVA Sbjct: 212 IEVHSSLKLLSKNENMPVCKIVA 234 >gi|188589956|ref|YP_001921406.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|251780872|ref|ZP_04823792.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500237|gb|ACD53373.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] gi|243085187|gb|EES51077.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 181 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 7/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 R+ K S LRK G IP II+G + P+ + ++ + + + N Sbjct: 1 MANVSFKVYERN--TKESKNKLRKAGLIPGIIFGEFLKESIPVKMCNAELHRMIRNNN-S 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I+TLD+ + + + K+ Q ++H F V + + +P+++I + Sbjct: 58 GSIITLDLEDKKFNCVVKEIQK-LSPREILHVSFQSVKANEKIKMRIPIKYIGQENLETK 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + IP+ + V+++ + D + +EDI +P+ + + Sbjct: 117 RLVLETFTPF--IDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPKDILVTTDPKTLL 174 Query: 182 ATIVA 186 A I Sbjct: 175 AVINP 179 >gi|182417185|ref|ZP_02625555.2| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237667957|ref|ZP_04527941.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379027|gb|EDT76533.1| ribosomal protein L25, Ctc-form [Clostridium butyricum 5521] gi|237656305|gb|EEP53861.1| ribosomal protein L25, Ctc-form [Clostridium butyricum E4 str. BoNT E BL5262] Length = 190 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 5/184 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E LS R K SAR R+ G IP +IYG + D+ + + + Sbjct: 1 MNELLLS--KRVKGNGHSARKERRKGAIPGVIYGKEIGNVLFDVDVLDLERE-LAVSGEH 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 +L D + + K+ Q + + +IH D +VS +T V ++ + Sbjct: 58 GVLEFDFEGKKGTAVIKELQKNHFGNKVIHMDLEEVSAKEKMTTEVSIKISGKGLLES-- 115 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 + L V V + C A ++P +D+++ G ++D+++ +K L+ I Sbjct: 116 KALILQVQKDLVKVTCTAADLPKEFNLDVSEGTAGTVYTLKDLKISDKVIVDDDLSSVIG 175 Query: 183 TIVA 186 +IVA Sbjct: 176 SIVA 179 >gi|225426106|ref|XP_002272347.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742259|emb|CBI34408.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 16/193 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKN--- 59 + A+ R GK + RK G++P+I++ + + + I++ I K + Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPAL 233 Query: 172 SSMSQLNITIATI 184 + + + I Sbjct: 234 KLLRSKDEPVCKI 246 >gi|145687759|gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana] Length = 251 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 16/194 (8%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYS---K 58 + A+ R K GK A RK G++P+I++ + + + I++ A I K + Sbjct: 46 TIHAIARAKSGKNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRS 105 Query: 59 NFMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 +F++ + L++ + V V+P+ L+ SD ++ F++ + + V VP+ Sbjct: 106 HFLSRLFDLEVRPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPL 165 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK 170 F E+ SPG+K+G LN++ V LCPA+ IP I VDL++L +G + M D+++ Sbjct: 166 IFRGEDVSPGLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPA 225 Query: 171 TSSMSQLNITIATI 184 + + + I Sbjct: 226 LKLVQPKDHPVVKI 239 >gi|297735240|emb|CBI17602.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKN--- 59 + A+ R GK + RK G++P+I++ + + + I++ I K + Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSF 113 Query: 60 FMTTILTLDIGKE--------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVR 111 F++ + L++G + V V+P+ L +D +++ F++ + + V VP+ Sbjct: 114 FLSRLFDLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLV 173 Query: 112 FINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKT 171 F E+ SPG+K+G LN + V LCPA+ IP I VDL++L G I M D+++ Sbjct: 174 FRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPAL 233 Query: 172 SSMSQLNITIATI 184 + + + I Sbjct: 234 KLLRSKDEPVCKI 246 >gi|226324228|ref|ZP_03799746.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] gi|225206676|gb|EEG89030.1| hypothetical protein COPCOM_02007 [Coprococcus comes ATCC 27758] Length = 194 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 82/183 (44%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R+ K A+ LR+ G + ++G + P+ ++ K+ K L N + + Sbjct: 3 TLKAEKRNMQTK--AKKLRREGYVTGNVFGREIEGSIPVQMTQKEAEKFLK-ANGKGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ E + V+ K+ D + ++ DF + G V V N++K G Sbjct: 60 MLDLDGEQMDVLVKEVDYDSMGSKVLEIDFQALVSGEMVHSVAEVVIHNQSKVV----TG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + + E+ + + + + VD+ DLK+G++I ++D+ + + ++ +A Sbjct: 116 VVEELLDEIEYKALPSALVEKVIVDVGDLKVGETIKVKDLDIAKDKDVKLITDPEADVAG 175 Query: 184 IVA 186 + A Sbjct: 176 VAA 178 >gi|187932531|ref|YP_001886413.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187720684|gb|ACD21905.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 181 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 7/185 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 R+ K S LRK G IP II+G ++ P+ + ++ + + + N Sbjct: 1 MANVSFKVYERN--TKESKNKLRKTGLIPGIIFGEFLTESIPVKMCNAELHRMIRNNN-S 57 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 +I+TLD+ + + + K+ Q ++H F V + + +P+++I + Sbjct: 58 GSIITLDLEDKKFNCVVKEIQK-LSPREILHVSFQSVKPNEKIKMRIPIKYIGQENLETK 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 + + + IP+ + V+++ + D + +EDI +P+ + + Sbjct: 117 RLVLETFTPF--LDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDINVPKDILVTTDPKTLL 174 Query: 182 ATIVA 186 A I Sbjct: 175 AVINP 179 >gi|309789906|ref|ZP_07684483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] gi|308228038|gb|EFO81689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oscillochloris trichoides DG6] Length = 199 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 5/171 (2%) Query: 16 VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKE-LV 74 GK + LR +G IP IYG + +SA++ K TT++ L+IG + + Sbjct: 2 FGKK-VKYLRSSGIIPCTIYGKGFEAVSAQVSAREFDLVFR-KAGRTTLIDLNIGSQGVS 59 Query: 75 HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEV 134 V +D Q PVS ++H DF V V V VPV + E+ LN V Sbjct: 60 AVFVQDIQRHPVSRAILHIDFKVVDLKKLVHVEVPVIAVGESPLVARGDAL-LNHPLSMV 118 Query: 135 SLLCPANNIPDSITVDLNDLK-IGDSIHMEDIRLPEKTSSMSQLNITIATI 184 + N++P I +D+ L + +IH+ D+ ++ + ++ Sbjct: 119 MVEALPNDLPQHIEIDVTCLDAMDKAIHVRDLAAQTGYKILNDGGDVLFSL 169 >gi|225430902|ref|XP_002276349.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 249 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 7/184 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSDPKPIALSAKDISKRLYSKNF 60 + A+ R GK + RK G++P+I++ G + + ++F Sbjct: 54 IRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSF 113 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 + I + L +D +++ F++ + + V VP+ F E+ SPG Sbjct: 114 FLSXXXXLIIWNFCFLRYFQLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPG 173 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 +K+G LN + V LCPA+ IP I VDL++L G I M D+++ + + Sbjct: 174 LKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEP 233 Query: 181 IATI 184 + I Sbjct: 234 VCKI 237 >gi|218133333|ref|ZP_03462137.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] gi|217992206|gb|EEC58210.1| hypothetical protein BACPEC_01198 [Bacteroides pectinophilus ATCC 43243] Length = 198 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G ++ P+ + D+ + + + + + + Sbjct: 3 TLKAEKRSLDVK--AKRLRREGFVTGNVFGRELAESIPVKMQKVDVERMMKTDH-KGSQI 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ E V+ KD +P+ I+ F + V V +N +K G Sbjct: 60 MLDVDGEQYDVLIKDIAFNPLKGIVEEISFQALVSNEMVHSVAEVILVNHDKV----AEG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIAT 183 + + +EVS + I DS+ VD++ +KIGD+I ++D+ + + + L + T Sbjct: 116 VVQQLLNEVSYKAYPSAIVDSVKVDVSQMKIGDTIRVKDLDIAADKDVEIHTDLEAPVVT 175 Query: 184 IVA 186 + A Sbjct: 176 VTA 178 >gi|187933675|ref|YP_001886412.1| ribosomal protein L25, Ctc-form [Clostridium botulinum B str. Eklund 17B] gi|187721828|gb|ACD23049.1| 50S ribosomal protein L25 [Clostridium botulinum B str. Eklund 17B] Length = 182 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 80/186 (43%), Gaps = 9/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 R K + + LR+ G IP +I+G + P+ + + +K + + N Sbjct: 1 MSNLTFKVYERSV--KENKKALRRTGLIPCVIFGEFLKESIPVKMPTGEFNKMI-TNNNS 57 Query: 62 TTILTLDIGKELVHVIPKDYQL-DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +I+TL++ + ++ + K+ Q P ++H F V + + +P+++I + Sbjct: 58 GSIITLNLNDKKINCVVKEIQKLSPSK--ILHVSFQSVKPNEKIKMRIPIKYIGQENLET 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + IP+ + V+++++ D + +ED+ +P+ M+ Sbjct: 116 KRLLLETFTPF--IDFQGDVEKIPEFLEVNVSEMSCEDKLFVEDVTVPDDVLVMTDPKTL 173 Query: 181 IATIVA 186 +A I Sbjct: 174 LAVITP 179 >gi|116792350|gb|ABK26327.1| unknown [Picea sitchensis] Length = 249 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 18/189 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY----------S 57 + A+ R++ G+ A RK+G +P++++ + + +S Sbjct: 41 IQAIPRERTGRFFASKERKSGLVPSVVFEQEENGLAAVRRKRLLSVESDQIRGLVNKVGH 100 Query: 58 KNFMTTILTLDIGK--------ELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 + F++ L++ E V+P+ L P ++ +++ F+ + + + V VP Sbjct: 101 QFFLSRTFELEVVAGPRSSHILEKGRVVPRKVHLRPGTEEILNVVFVWAPKCAKLKVDVP 160 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + F E+ PG+++GG LN + + LCPA+ IP I +DL++L IG+ +H+ DI + Sbjct: 161 LVFKGEDVCPGLRKGGYLNTIKKTIGYLCPADLIPPYIDIDLSNLDIGEKLHVRDINVHP 220 Query: 170 KTSSMSQLN 178 +S + Sbjct: 221 SLKLLSGDD 229 >gi|218508780|ref|ZP_03506658.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium etli Brasil 5] Length = 116 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 64/95 (67%) Query: 96 LQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK 155 + V+V +PV FINE KSPG+K GG LN+V HEV + CPA+ IP+ +DL+ K Sbjct: 9 CACRGNTQVSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKK 68 Query: 156 IGDSIHMEDIRLPEKTSSMSQLNITIATIVAPISG 190 IGDSIH+ ++ LP+ + + + TIATIVAP +G Sbjct: 69 IGDSIHISEVTLPKGVTPVIDRDFTIATIVAPAAG 103 >gi|291517978|emb|CBK73199.1| ribosomal protein L25, Ctc-form [Butyrivibrio fibrisolvens 16/4] Length = 195 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 12/183 (6%) Query: 9 SAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTILTL 67 RD K A+ LR+ G + ++G + P+ K+ SK+ T +TL Sbjct: 5 KVQRRDMEKK--AKRLRREGYVTGNLFGRDIEQSIPLQFEVKEAEALRKSKH---TQMTL 59 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 D+ + +V+ K+ D ++ DF ++ +G + V N+ G L Sbjct: 60 DLEGKKYNVLLKELHFDAAKHQIVEMDFQELVKGEVIHATAEVVLENKEAVT----EGVL 115 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIATIV 185 + EV+ A ++ + I +D + L++GD+I + D+ + + ++ + + ++ Sbjct: 116 EQLVSEVAYKAKAEDVVEKIEIDCSSLRLGDTITVADLAIAKNKKVEVTTRADQVVVEVI 175 Query: 186 API 188 A Sbjct: 176 AAK 178 >gi|332659386|gb|AEE84786.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing protein [Arabidopsis thaliana] Length = 277 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 29/208 (13%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----G-NMSDPKPIALSAKDISKRLYSKNF- 60 + AV R GK + RK G++P+II+ G + + + I++ I K + + Sbjct: 53 TILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYS 112 Query: 61 ------MTTILTLDIGKELVHVIPK-----------------DYQLDPVSDILIHADFLQ 97 + +IG + V + L +D ++ F++ Sbjct: 113 FFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIR 172 Query: 98 VSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG 157 G+ + V +P+ FI ++ SPG+K+G LN + V LCPA IP I VDL+ L IG Sbjct: 173 APPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIG 232 Query: 158 DSIHMEDIRLPEKTSSMSQLNITIATIV 185 + M D+++ + + I + Sbjct: 233 QKLVMGDLKVHPALKLIKSKDEPIVKVA 260 >gi|94502332|ref|ZP_01308804.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833659|ref|YP_001597855.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] gi|94451109|gb|EAT14062.1| ribosomal protein L25 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206148|gb|ABS30458.1| ribosomal protein L25 [Candidatus Sulcia muelleri GWSS] Length = 188 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L + + K + R LR G IP I+YG + + K +Y+ Sbjct: 1 MNCVNLQGKTKKFLKKINNRELRNYGYIPCIVYGINK-NIKFYILLSILKKVIYTFKVYK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 IL + + + + K+ Q +P++D +IH DF ++ + + + V I+ S G+ Sbjct: 60 VILEIK-NEYKIEALLKEIQFNPINDDVIHVDFYELKKNK--YIIISVPIISVGHSLGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG+ + +++L I D + +D+++L IGD++ +++I P+ + N IA Sbjct: 117 KGGEYKIFIKKINLKVIPEFILDHMDIDISNLDIGDNLSIKNIYNPK-YIILHNCNDVIA 175 Query: 183 TI 184 ++ Sbjct: 176 SV 177 >gi|168044236|ref|XP_001774588.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674143|gb|EDQ60656.1| predicted protein [Physcomitrella patens subsp. patens] Length = 206 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 16/196 (8%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIY----GN-MSDPKPIALSAKDISKRLYSK 58 +E L R GK ++ R+ G++P+I++ G+ + + I++ K I + + Sbjct: 8 EEVIL-GFPRHGSGKIVSKKERRVGRVPSIVFSQENGHIGGNKQLISVETKQIERLIKRL 66 Query: 59 N---FMTTILTLDIGKE------LVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 F+++ L++ + V+P+ L +D +++ F++ +++ V VP Sbjct: 67 GKSSFLSSTFDLEVYDDQGNVQAKERVLPRSIHLHAGTDKVMNVTFIRAPPTASLKVDVP 126 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + FI E+ PGI++GG + + V CP N+IP I VDL+ L +G+ I + D+ +P Sbjct: 127 LIFIGEDACPGIRKGGYIYTMMRTVKYRCPGNSIPSGIEVDLSTLDMGEKILLRDLNVPS 186 Query: 170 KTSSM-SQLNITIATI 184 + + ++ + + Sbjct: 187 ELRLVKKDSSLPVCKV 202 >gi|82523964|emb|CAI78775.1| ribosomal protein L25 [uncultured epsilon proteobacterium] Length = 192 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R+ + K LR++G + A IYG A + + + N T + Sbjct: 16 LQGIIRESISKSGTNALRRDGYLIANIYGKGIANINAAFKENEYIRTVR--NKETLSFPV 73 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + ++V+ + Y+ V+ L+H D + G H+PV + + G+K G + Sbjct: 74 SVNGSEMNVVVQSYESHAVTGRLLHVDLMIAQPGVVTHYHIPV--TTKGIALGLKNKGLV 131 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 N+ + + N+P+SI VD+ + +GDS + D+ + + + + +I+ Sbjct: 132 NISKSRLRVKAAIENVPNSIVVDVTPMDVGDSRLIRDLPKIQNVTFTDSDRVAVVSIIKA 191 Query: 188 I 188 Sbjct: 192 K 192 >gi|291562562|emb|CBL41378.1| LSU ribosomal protein L25P [butyrate-producing bacterium SS3/4] Length = 203 Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 78/184 (42%), Gaps = 10/184 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTI 64 L A R K A+ LR+ G + ++G+ + P+ +++ D + L +++ Sbjct: 2 TTLKAEKRSMDVK--AKRLRREGFVTGNVFGHAIEGSIPVKMNSVDAERLLKTEH-KGGQ 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + LDI ++ V+ K+ + ++ + DF + VT + +N G Sbjct: 59 INLDIEGQVYDVLIKEVDYNAMTRKIDEIDFQALVSTEKVTSTAEIVILNREAVIGGVLQ 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEK--TSSMSQLNITIA 182 L EV+ + + + T+D LK+GD +H++D+ + + + + Sbjct: 119 EDL----SEVAYRAFPSALIEKTTLDAAGLKVGDIVHVKDLDIAKNKDIDLKTDPEAVVL 174 Query: 183 TIVA 186 +++ Sbjct: 175 SVIP 178 >gi|218193303|gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group] Length = 239 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 18/200 (9%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKNFM 61 + A+ R+ G +A R++G++PA++ G L D + Sbjct: 37 TIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQS 96 Query: 62 TTILTLDIG------------KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 L+ + V+P D + +++ ++ EG+ + V++P Sbjct: 97 PYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLP 156 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI + Sbjct: 157 VEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHP 216 Query: 170 KTSSMSQLNI-TIATIVAPI 188 +S+ + I+A Sbjct: 217 SLKLLSKNETMPVCKILASK 236 >gi|251780174|ref|ZP_04823094.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084489|gb|EES50379.1| 50S ribosomal protein L25 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 182 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 79/186 (42%), Gaps = 9/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 R K + + LR+ G IP +I+G + P+ + + +K + + N Sbjct: 1 MSNVTFKVYERSI--KENKKGLRRTGLIPGVIFGEFLKESVPVKMPTGEFNKMI-TNNNS 57 Query: 62 TTILTLDIGKELVHVIPKDYQL-DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +I+TL++ + ++ + K+ Q P ++H F V + + +P++++ + Sbjct: 58 GSIITLNLNDKKINCVVKEIQKLSPSK--ILHVSFQSVKPNEKIKMRIPIKYVGQENLET 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + IP+ + V+++ + D + +EDI +P+ ++ Sbjct: 116 NRLLLETFTPF--IDFQGDVEKIPEFLEVNVSKMSCEDKLFVEDISVPDDVLVLTDPKTL 173 Query: 181 IATIVA 186 +A I Sbjct: 174 LAVITP 179 >gi|108709804|gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 239 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 18/200 (9%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKNFM 61 + A+ R+ G +A R++G++PA++ G L D + Sbjct: 37 TIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQS 96 Query: 62 TTILTLDIG------------KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 L+ + V+P D + +++ ++ EG+ + V++P Sbjct: 97 PYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLP 156 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V F E+ PG+K+GG L + + LCPA +IP I VDL +L IGD + M DI + Sbjct: 157 VEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHP 216 Query: 170 KTSSMSQLNI-TIATIVAPI 188 +S+ + I+A Sbjct: 217 SLRLLSKNETMPVCKILASK 236 >gi|188588817|ref|YP_001921405.1| ribosomal protein L25, Ctc-form [Clostridium botulinum E3 str. Alaska E43] gi|188499098|gb|ACD52234.1| 50S ribosomal protein L25 [Clostridium botulinum E3 str. Alaska E43] Length = 182 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 79/186 (42%), Gaps = 9/186 (4%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFM 61 R K + + LR+ G IP +I+G + P+ + + +K + + N Sbjct: 1 MSNVTFKVYERSV--KENKKGLRRIGLIPGVIFGEFLKESIPVKMPTGEFNKMI-TNNNS 57 Query: 62 TTILTLDIGKELVHVIPKDYQL-DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 +I+TL++ + ++ + K+ Q P ++H F V + + +P++++ + Sbjct: 58 GSIITLNLNDKKINCVVKEIQKLSPSK--ILHVSFQSVKPNEKIKMRIPIKYVGQENLET 115 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180 + + + IP+ + V+++ + D + +EDI +P+ ++ Sbjct: 116 NRLLLETFTPF--IDFQGDVEKIPEFLEVNVSKMNCEDKLFVEDISVPDDVLVLTDPKTL 173 Query: 181 IATIVA 186 +A I Sbjct: 174 LAVITP 179 >gi|332290495|ref|YP_004421347.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] gi|330433391|gb|AEC18450.1| 50S ribosomal protein L25 [Gallibacterium anatis UMN179] Length = 94 Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 51/92 (55%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R+ GKG++R LRK G+IPAI+YG P I L+ +++ +F + ++ Sbjct: 2 FKFNAEIRETQGKGASRRLRKAGKIPAIVYGGNEAPVSIVLNHNELNNAQVEDSFYSEVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V V + Q P L+H DF + Sbjct: 62 TLVINGKEVAVKVQAMQRHPFKPKLVHIDFKR 93 >gi|319776525|ref|YP_004139013.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] gi|317451116|emb|CBY87349.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3047] Length = 95 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|253989145|ref|YP_003040501.1| 50S ribosomal protein L25 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780595|emb|CAQ83757.1| 50s ribosomal protein l25 [Photorhabdus asymbiotica] Length = 94 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 46/92 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAI+YG +P I L + + F + IL Sbjct: 2 FTINAEVRKEQGKGASRRLRRANKFPAIVYGGKQEPVSIELDHDQVINMEHKAEFYSEIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q P L H DFL+ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFLR 93 >gi|256370610|ref|YP_003108435.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] gi|256009402|gb|ACU52762.1| ribosomal protein L25 [Candidatus Sulcia muelleri SMDSEM] Length = 199 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 82/187 (43%), Gaps = 8/187 (4%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 + + K S R LR +G +P +IY ++ + K L N+ Sbjct: 1 MNNIINIQGEK---IKKKSNRELRNSGYVPCVIY-RKKKNITFSVLISTLKKNLLKMNYY 56 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 L + + I K+ Q P+++ +IH DF ++ + + T+ +P I+E S G+ Sbjct: 57 KIYLKIK-NYYKMEAILKEIQFHPITENVIHVDFYELKKKNKYTISIP--LISEGHSIGV 113 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 +GG+ + ++ L I +++++L+IG++ +++ I P+ + I Sbjct: 114 SKGGEYKLFLKKIKLKILKYFFLKKIFLNISNLEIGNNFYLKKIYNPK-YILLHFKKEVI 172 Query: 182 ATIVAPI 188 A++ Sbjct: 173 ASVFPSR 179 >gi|288871671|ref|ZP_06118530.2| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] gi|288862497|gb|EFC94795.1| ribosomal protein L25, Ctc-form [Clostridium hathewayi DSM 13479] Length = 212 Score = 92.5 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 10/175 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + + + L + N + + Sbjct: 17 TLKAEKRSMSIK--AKRLRREGYVTGNVFGRDIQESIPVKIERTVVERLLKTCN-KGSQI 73 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V+ KD + + I+ DF + G V V +N +K G Sbjct: 74 LLDVDGQAYDVLIKDISFNAMKGIVEEIDFQALVRGEKVHSVAEVILVNHDKV----MNG 129 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLN 178 L E+S + D + +D+ D+K+GD+I + D+ + + ++ L+ Sbjct: 130 VLQQQLQEISYKALPEALIDKVRIDVGDMKVGDTIRVADLDIAKNKNVDLVTDLD 184 >gi|68249779|ref|YP_248891.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145635085|ref|ZP_01790791.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148826154|ref|YP_001290907.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229844811|ref|ZP_04464949.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] gi|81335793|sp|Q4QL66|RL25_HAEI8 RecName: Full=50S ribosomal protein L25 gi|166223686|sp|A5UCM3|RL25_HAEIE RecName: Full=50S ribosomal protein L25 gi|68057978|gb|AAX88231.1| 50S ribosomal protein L25 [Haemophilus influenzae 86-028NP] gi|145267693|gb|EDK07691.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] gi|148716314|gb|ABQ98524.1| 50S ribosomal protein L25 [Haemophilus influenzae PittEE] gi|229812192|gb|EEP47883.1| 50S ribosomal protein L25 [Haemophilus influenzae 6P18H1] Length = 95 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|226528050|ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG38519.1| 5S rRNA binding protein [Zea mays] Length = 240 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSDPKPIALSAKDI--SKRLYS 57 + AV R+ G +A R++G++PA++ GN + + + + S Sbjct: 38 TIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQS 97 Query: 58 KNFMTTILTLDIGKELV--------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 F++T + L + V+P D S +++ ++ EG+ + V +P Sbjct: 98 PYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKVDLP 157 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI + Sbjct: 158 VEFKGEDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHP 217 Query: 170 KTSSMSQLNI-TIATIVAPI 188 +S+ + I+A Sbjct: 218 SLKLLSKNETMPVCKILASK 237 >gi|301170388|emb|CBW29994.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae 10810] Length = 95 Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTVQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|87162737|gb|ABD28532.1| Ribosomal protein L25 [Medicago truncatula] gi|217072210|gb|ACJ84465.1| unknown [Medicago truncatula] Length = 266 Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 22/200 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY----GN-MSDPKPIALSAKDISKRLYSKN-- 59 + A+ R GK + RK G++P+I++ G+ + + I++ + I K + Sbjct: 53 TILAIPRKDSGKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRS 112 Query: 60 -FMTTILTLDIGKELV--------------HVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 F++ + L + + V+P+ L +D ++ F++ + + Sbjct: 113 FFLSRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWL 172 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VP+ F ++ SPG+K+G LN + V LCPA+ IP I VDL++L +G + M D Sbjct: 173 KVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGD 232 Query: 165 IRLPEKTSSMSQLNITIATI 184 + + + + + I Sbjct: 233 LNVHPALKLLHPKDEAVCKI 252 >gi|329124034|ref|ZP_08252581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] gi|327467459|gb|EGF12957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus aegyptius ATCC 11116] Length = 95 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 52/92 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTTQGKGASRRLRNNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVDGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|114562619|ref|YP_750132.1| ribosomal protein L25 [Shewanella frigidimarina NCIMB 400] gi|122300188|sp|Q084M1|RL25_SHEFN RecName: Full=50S ribosomal protein L25 gi|114333912|gb|ABI71294.1| LSU ribosomal protein L25P [Shewanella frigidimarina NCIMB 400] Length = 95 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 50/92 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++AV R ++GKGS+R LR G++PA+IYG +P I KDI + +F TT Sbjct: 2 SYTINAVTRTEIGKGSSRRLRHAGKVPAVIYGPGKEPVSIKFEHKDIINIQLNDDFYTTD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ I + V V K Q ++ H DF+ Sbjct: 62 LTVSIEGKEVKVRVKAIQRHAFKQLVEHIDFM 93 >gi|254458793|ref|ZP_05072217.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] gi|207084559|gb|EDZ61847.1| ribosomal protein L25, Ctc-form [Campylobacterales bacterium GD 1] Length = 178 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 80/181 (44%), Gaps = 4/181 (2%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L ++R K S + LR++G + A IYG + A + + + K + +++ Sbjct: 2 LEGIIRKSTDKQSTKTLRRDGYLIANIYGKGLENINAAFKMNEYIRTVRKKETLAFPVSI 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + + + V + Q PV+ L+H D + G T +VPV + ++ G+K G + Sbjct: 62 EGKEMNLVVQSYEAQ--PVTGTLLHVDLMVAQPGVVTTYNVPV--VPVGEAFGLKNKGLV 117 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVAP 187 + +++ N+P++ +D+ + GDS + D+ + + + +I+ Sbjct: 118 HKAKPRLTVKGAIENVPNTFEIDVTKMDTGDSKLIRDLDPIPNVVMLDSDRVAVISIIKA 177 Query: 188 I 188 Sbjct: 178 K 178 >gi|15240108|ref|NP_201487.1| unknown protein [Arabidopsis thaliana] gi|9758136|dbj|BAB08628.1| unnamed protein product [Arabidopsis thaliana] gi|15450930|gb|AAK96736.1| Unknown protein [Arabidopsis thaliana] gi|17978763|gb|AAL47375.1| unknown protein [Arabidopsis thaliana] gi|332010889|gb|AED98272.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain protein [Arabidopsis thaliana] Length = 249 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 23/203 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----------GNMSDPKPIALSAKDISKRL 55 + A+ R+ G+G + R G+IPA+++ +S + + K I + Sbjct: 35 TIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSII 94 Query: 56 YSKN---FMTTILTLDIGKELVHVIPKD--------YQLDPVSDILIHADFLQVSEGSTV 104 S F +T L I + D + +++ F+ +G + Sbjct: 95 DSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKL 154 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VPV F + PG+++GG L + + LL PA +IP I VD+++L I D + ++D Sbjct: 155 KVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQD 214 Query: 165 IRLPEKTSSMSQLNI-TIATIVA 186 + +S+ + IVA Sbjct: 215 VVFHPSLKLLSKNETMPVCKIVA 237 >gi|251792509|ref|YP_003007235.1| 50S ribosomal protein L25 [Aggregatibacter aphrophilus NJ8700] gi|247533902|gb|ACS97148.1| ribosomal L25p family [Aggregatibacter aphrophilus NJ8700] Length = 95 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 51/92 (55%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHDAFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|153813481|ref|ZP_01966149.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] gi|149830425|gb|EDM85517.1| hypothetical protein RUMOBE_03901 [Ruminococcus obeum ATCC 29174] Length = 199 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ +S ++ K L + + + + Sbjct: 3 TLKAEKRSMDVK--AKRLRREGYVTGNVFGREIEGSIPVKMSKSEVDKLLKTDH-KGSQV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P++ + DF + V + +N +K G Sbjct: 60 MLEVDGQTYDALIKEVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDKV----ADG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 L E++ + + D + VD+ LK+GD+I ++D+ L + + T Sbjct: 116 VLQENMEEINYRAYPSALVDKVEVDVAGLKVGDTIRVKDLSLAKDKDVDIKDDPEAVVLT 175 Query: 184 IVA 186 +VA Sbjct: 176 VVA 178 >gi|239501213|ref|ZP_04660523.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii AB900] gi|226736751|sp|A3M2X2|RL25_ACIBT RecName: Full=50S ribosomal protein L25 gi|193076600|gb|ABO11266.2| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|322507005|gb|ADX02459.1| rplY [Acinetobacter baumannii 1656-2] gi|323516872|gb|ADX91253.1| 50S ribosomal protein L25 [Acinetobacter baumannii TCDC-AB0715] Length = 98 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 1 MANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKR 97 >gi|317492527|ref|ZP_07950955.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919519|gb|EFV40850.1| ribosomal L25p family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 94 Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R + GKG++R LR +G+ PAI+YG +P + + + F ++ Sbjct: 2 FTIEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V + Q P L H DF++ Sbjct: 62 ALMIDGKETKVKVQAVQRHPFKRKLTHVDFVR 93 >gi|145633031|ref|ZP_01788763.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145637517|ref|ZP_01793175.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148828381|ref|YP_001293134.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229846264|ref|ZP_04466376.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|166223687|sp|A5UIZ5|RL25_HAEIG RecName: Full=50S ribosomal protein L25 gi|144986257|gb|EDJ92836.1| 50S ribosomal protein L25 [Haemophilus influenzae 3655] gi|145269323|gb|EDK09268.1| 50S ribosomal protein L25 [Haemophilus influenzae PittHH] gi|148719623|gb|ABR00751.1| 50S ribosomal protein L25 [Haemophilus influenzae PittGG] gi|229811268|gb|EEP46985.1| 50S ribosomal protein L25 [Haemophilus influenzae 7P49H1] gi|309973302|gb|ADO96503.1| 50S ribosomal protein L25 [Haemophilus influenzae R2846] Length = 95 Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL IG + V V + Q P L+H DF + Sbjct: 63 TLVIGGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|295109370|emb|CBL23323.1| LSU ribosomal protein L25P [Ruminococcus obeum A2-162] Length = 199 Score = 90.9 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKNFMTTIL 65 L A R K A+ LR+ G + ++G + P+ + ++ K L + + + + Sbjct: 3 TLKAEKRSMDVK--AKRLRREGYVTGNVFGREIEGSIPVKMLKTEVDKLLKTDH-KGSQV 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 L++ + + K+ +P++ + DF + V + +N +K G Sbjct: 60 MLEVDGQTYDALIKEVDFNPLAGRVDEIDFQALVSNEKVHSVAEIVIVNHDKV----ADG 115 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLP--EKTSSMSQLNITIAT 183 L EV+ + + D + VD+ LK+GD+I ++D+ L + + T Sbjct: 116 VLQENMEEVNYKAYPSALVDKVEVDVAGLKVGDTIRVKDLSLAKDKDVDIKDDPEAVVLT 175 Query: 184 IVA 186 +VA Sbjct: 176 VVA 178 >gi|284007246|emb|CBA72542.1| 50S ribosomal protein L25 [Arsenophonus nasoniae] Length = 93 Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LRKN ++PAI+YG +P I L+ ++ + F L Sbjct: 2 LTINAEIRKEQGKGASRRLRKNNKLPAIVYGGDQEPVSIELNHDEVINQESKPEFYEV-L 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL +G + V + Q P L H DFL+V Sbjct: 61 TLVVGGKKTKVKVQAVQRHPFKPKLTHIDFLRV 93 >gi|315634254|ref|ZP_07889541.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] gi|315476844|gb|EFU67589.1| 50S ribosomal subunit protein L25 [Aggregatibacter segnis ATCC 33393] Length = 128 Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ F + ++ Sbjct: 36 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDEVNNAQAHDAFYSDVI 95 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 96 TLVIDGKEVAVKVQAMQRHPFKPKLVHVDFKRV 128 >gi|126640884|ref|YP_001083868.1| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] gi|184157106|ref|YP_001845445.1| 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260555727|ref|ZP_05827947.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332872682|ref|ZP_08440650.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] gi|183208700|gb|ACC56098.1| putative 50S ribosomal protein L25 [Acinetobacter baumannii ACICU] gi|260410638|gb|EEX03936.1| ribosomal L25p [Acinetobacter baumannii ATCC 19606] gi|332739211|gb|EGJ70070.1| ribosomal L25p family protein [Acinetobacter baumannii 6014059] Length = 103 Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 6 MANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNAF 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 66 FEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKR 102 >gi|262280067|ref|ZP_06057852.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] gi|262260418|gb|EEY79151.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus RUH2202] Length = 98 Score = 90.5 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR IPAIIYG ++P I L + + K L + F Sbjct: 1 MSNFVLNAQARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRQLVKALENNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FQEVIEIQVGDKVENVKIQALQRHPAKNTPMHADFKR 97 >gi|34499512|ref|NP_903727.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] gi|71153134|sp|Q7NQT0|RL25_CHRVO RecName: Full=50S ribosomal protein L25 gi|34105362|gb|AAQ61717.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472] Length = 95 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +L A R +G G++R LR+ G++PA++YG D + L + + +F T++ Sbjct: 2 SYELIAAKRVDLGTGASRRLRRAGKLPAVVYGAGKDAVSLELDHNTLYHAVKHADFHTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L L I + V +Q+ P ++H DF +V Sbjct: 62 LELVIDGQKEQVKVAAFQMHPYKQQVLHIDFARV 95 >gi|307103465|gb|EFN51725.1| hypothetical protein CHLNCDRAFT_139900 [Chlorella variabilis] Length = 239 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 9/179 (5%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIY-GNMSDPKPIALSAKDISK--------R 54 + L+A R VG ++ LRK G+ P I++ G + +A +K + K Sbjct: 47 EPLTLAAEERGLVGSIASNKLRKAGKTPGIVFSGPGGEQHLLAFDSKALGKLVTKLGRTA 106 Query: 55 LYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 F I D V + + + +D + + F+ V V VP++ I Sbjct: 107 WACSVFDLQIQGEDGSSRTVRALGRQVHMTSTTDAVENVTFVFCPPERQVRVEVPLKVIG 166 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 E+ SPGIK GG++N + + L ++IP TVD++ +++ D ++ D+ +P+ Sbjct: 167 EDVSPGIKGGGRVNWIRRTIPCLARGDSIPRDFTVDISKMELNDKLYFTDLAVPQGAVL 225 >gi|240948487|ref|ZP_04752862.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] gi|240297150|gb|EER47716.1| 50S ribosomal protein L25 [Actinobacillus minor NM305] Length = 95 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + Sbjct: 2 SFKFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNLNNAQIHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|332278657|ref|ZP_08391070.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|332101009|gb|EGJ04355.1| 50S ribosomal protein L25 [Shigella sp. D9] Length = 126 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 46/94 (48%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++A +R + GKG++R LR + PAIIYG P I L + F + Sbjct: 32 EMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSE 91 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +LT+ + + + V +D Q P L H DF++ Sbjct: 92 VLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 125 >gi|226953440|ref|ZP_03823904.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|294649570|ref|ZP_06726990.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] gi|226835823|gb|EEH68206.1| 50S ribosomal protein L25 [Acinetobacter sp. ATCC 27244] gi|292824557|gb|EFF83340.1| 50S ribosomal protein L25 [Acinetobacter haemolyticus ATCC 19194] Length = 100 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 1 MDQKECKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R+ + GKGS+R LR QIPAIIYG ++P I L ++I K L + Sbjct: 1 MPMANFVLNAQAREAAQQGKGSSRRLRHAAQIPAIIYGGSAEPVAITLELREIVKALENN 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 F ++ + IG ++ +V + Q P + +HADF + Sbjct: 61 AFFEEVIEIKIGDKVENVKIQALQRHPAKNTPMHADFKR 99 >gi|294637091|ref|ZP_06715405.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] gi|291089719|gb|EFE22280.1| ribosomal L25p family protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG D I L F +L Sbjct: 2 LTINAEVRNEQGKGASRRLRSAGKFPAIVYGGKEDALTITLDHDSTMNMSEKDGFYGEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + + V + Q P L H DF++ Sbjct: 62 TLVVDGKEIKVKVQAVQRHPYKPKLSHIDFVR 93 >gi|221633140|ref|YP_002522365.1| 50S ribosomal protein L25, Ctc-form [Thermomicrobium roseum DSM 5159] gi|254801064|sp|B9L0T5|RL25_THERP RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gi|221156354|gb|ACM05481.1| ribosomal protein L25, Ctc-form [Thermomicrobium roseum DSM 5159] Length = 223 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 7/179 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNF 60 + ++ R GK + LR+ G+ P +I G + +P P+A+ ++ + + Sbjct: 1 MTEHPVVNGERRTVFGKK-VKRLRRLGRTPGVIAGPVVPEPIPVAVDEREFERAFHHV-G 58 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPG 120 ++ L + V ++ L PV+ +++ +F VTV VPV + E Sbjct: 59 TARLVDLVVDGTTYPVFIREVALHPVTREILNVEFYAPDLARPVTVTVPVLTVGELAPDV 118 Query: 121 IKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG-DSIHMEDIRLPEKTSSMSQLN 178 + + + E+ + + +P+ I VDL+ L IH +I LP + + Sbjct: 119 VG---VVTIQTPELEIRALPDAVPEHIEVDLSLLSTERTVIHAGEIPLPVGVELETDPD 174 >gi|213156613|ref|YP_002318274.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|215484443|ref|YP_002326676.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] gi|301348151|ref|ZP_07228892.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB056] gi|301512834|ref|ZP_07238071.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB058] gi|301596892|ref|ZP_07241900.1| 50S ribosomal protein L25 [Acinetobacter baumannii AB059] gi|226736701|sp|B7GYQ9|RL25_ACIB3 RecName: Full=50S ribosomal protein L25 gi|226736702|sp|B7I7B6|RL25_ACIB5 RecName: Full=50S ribosomal protein L25 gi|213055773|gb|ACJ40675.1| ribosomal L25 [Acinetobacter baumannii AB0057] gi|213986765|gb|ACJ57064.1| Ribosomal L25p family protein [Acinetobacter baumannii AB307-0294] Length = 98 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 1 MANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNVF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKR 97 >gi|255318851|ref|ZP_05360077.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262378891|ref|ZP_06072048.1| ribosomal L25p [Acinetobacter radioresistens SH164] gi|255304107|gb|EET83298.1| ribosomal L25p family protein [Acinetobacter radioresistens SK82] gi|262300176|gb|EEY88088.1| ribosomal L25p [Acinetobacter radioresistens SH164] Length = 98 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R D GKG++R LR Q+PAIIYG ++P I L + + K L + F Sbjct: 1 MANFTLNAQARAADVQGKGASRRLRHAAQLPAIIYGGDAEPVAITLELRQLVKALENNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G + V + Q P + +HADF + Sbjct: 61 FEEVIEIVVGDKTESVKIQALQRHPAKNTPMHADFKR 97 >gi|169634104|ref|YP_001707840.1| 50S ribosomal protein L25 [Acinetobacter baumannii SDF] gi|169152896|emb|CAP01934.1| 50S ribosomal protein L25 [Acinetobacter baumannii] Length = 103 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 6 MANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVTVTLELRELVKALESNAF 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 66 FEKVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKR 102 >gi|110615712|gb|ABF04379.1| 50S ribosomal subunit protein L25 [Shigella flexneri 5 str. 8401] Length = 118 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 46/94 (48%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++A +R + GKG++R LR + PAIIYG P I L + F + Sbjct: 24 EMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSE 83 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +LT+ + + + V +D Q P L H DF++ Sbjct: 84 VLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 117 >gi|297794323|ref|XP_002865046.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] gi|297310881|gb|EFH41305.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp. lyrata] Length = 245 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 23/203 (11%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGN------------------MSDPKPIALSA 48 + A+ R+ G+G + R G+IPA+++ +D K I Sbjct: 31 TIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLETDASKRGVSRKQLLTADNKQIKSII 90 Query: 49 KDISKRLYSKNFMTTILTLDIGKEL----VHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 + + + G V+P D + +++ F+ +G + Sbjct: 91 DSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKIHRDEENGKILNLVFVWADDGEKL 150 Query: 105 TVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMED 164 V VPV F + PG+K+GG L + + LL PA +IP I VD+++L I D + ++D Sbjct: 151 KVDVPVVFNGLDNCPGLKKGGNLRSIRSTLKLLGPAEHIPSKIEVDVSELDIEDKVLLQD 210 Query: 165 IRLPEKTSSMSQLNI-TIATIVA 186 + +S+ + IVA Sbjct: 211 VVFHPSLKLLSKNETMPVCKIVA 233 >gi|71153114|sp|Q6F8I8|RL25_ACIAD RecName: Full=50S ribosomal protein L25 Length = 98 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R++ GKG++R LR+ +PAIIYG ++P + + +++ K L + F Sbjct: 1 MANFVLNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FEEVVEVKVGDKVENVKIQALQRHPAKNTPMHADFKR 97 >gi|37526759|ref|NP_930103.1| 50S ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] gi|68053195|sp|Q7N352|RL25_PHOLL RecName: Full=50S ribosomal protein L25 gi|36786191|emb|CAE15243.1| ribosomal protein L25 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 94 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAI+YG + I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRRANKFPAIVYGGNQELVSIELDHDQVINMEQKAEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q P L H DFL+ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFLR 93 >gi|145627769|ref|ZP_01783570.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|145630952|ref|ZP_01786728.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145639243|ref|ZP_01794849.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145641796|ref|ZP_01797372.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|319897302|ref|YP_004135497.1| 50S ribosomal subunit protein l25 [Haemophilus influenzae F3031] gi|144979544|gb|EDJ89203.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.1-21] gi|144983419|gb|EDJ90895.1| 50S ribosomal protein L25 [Haemophilus influenzae R3021] gi|145271546|gb|EDK11457.1| 50S ribosomal protein L25 [Haemophilus influenzae PittII] gi|145273610|gb|EDK13480.1| 50S ribosomal protein L25 [Haemophilus influenzae 22.4-21] gi|309751124|gb|ADO81108.1| 50S ribosomal protein L25 [Haemophilus influenzae R2866] gi|317432806|emb|CBY81171.1| 50S ribosomal subunit protein L25 [Haemophilus influenzae F3031] Length = 95 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 52/92 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVDGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|293609064|ref|ZP_06691367.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|292829637|gb|EFF87999.1| 50S ribosomal protein L25 [Acinetobacter sp. SH024] gi|325121162|gb|ADY80685.1| 50S ribosomal protein L25 [Acinetobacter calcoaceticus PHEA-2] Length = 98 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ IPAIIYG ++P + L +++ K L S F Sbjct: 1 MANFVLNAQARAEDKQGKGASRRLRREALIPAIIYGGNAEPVTVTLELRELVKALESNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKR 97 >gi|302770773|ref|XP_002968805.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] gi|300163310|gb|EFJ29921.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii] Length = 264 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 19/201 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY--------GNMSDPKPIALSAKDISKRLYSKN 59 L A R + G + +R G IP I+ G+ + + K+ Sbjct: 57 LYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNSNKLNLLLKKFGQSF 116 Query: 60 FMTTILTLDIGKELVH----------VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ + Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDLNVTP 236 Query: 170 K-TSSMSQLNITIATIVAPIS 189 + IV + Sbjct: 237 GLVVYAMDPRWPVCKIVGTRA 257 >gi|302784798|ref|XP_002974171.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] gi|300158503|gb|EFJ25126.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii] Length = 264 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 19/201 (9%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY--------GNMSDPKPIALSAKDISKRLYSKN 59 L A R + G + +R G IP I+ G+ + + K+ Sbjct: 57 LYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNSNKLNLLLKKFGQSF 116 Query: 60 FMTTILTLDIGKELVH----------VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 FM+ + TL++ E V+P+ + VSD +++A F++ + + V +P Sbjct: 117 FMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHARLRVDIP 176 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + FI + PGI++GG LN + V + IP I VDL++L+ G S+ ++D+ + Sbjct: 177 LVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRIKDLNVTP 236 Query: 170 K-TSSMSQLNITIATIVAPIS 189 + IV + Sbjct: 237 GLVVYAMDPRWPVCKIVGTRA 257 >gi|262373268|ref|ZP_06066547.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] gi|262313293|gb|EEY94378.1| 50S ribosomal protein L25 [Acinetobacter junii SH205] Length = 100 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 1 MDQKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSK 58 M L+A R+ GKG++R LR QIPAIIYG ++P I L ++I K L S Sbjct: 1 MPMANFVLNAQAREAALQGKGASRRLRHASQIPAIIYGGSAEPVTITLELREIVKALESN 60 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 F ++ + IG ++ +V + Q P + +HADF + Sbjct: 61 EFFEEVIEIKIGDKVENVKIQALQRHPAKNTPMHADFKR 99 >gi|257465408|ref|ZP_05629779.1| 50S ribosomal protein L25 [Actinobacillus minor 202] gi|257451068|gb|EEV25111.1| 50S ribosomal protein L25 [Actinobacillus minor 202] Length = 95 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + Sbjct: 2 SFKFEAEVRTAQGKGASRRLRHNGQVPAIIYGGSAEPVSIVLNHDNVNNAQVHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|325578128|ref|ZP_08148263.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] gi|325159864|gb|EGC71993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haemophilus parainfluenzae ATCC 33392] Length = 97 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F Sbjct: 1 MKMA-FKFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQAHDSF 59 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + ++TL + + V V + Q P L+H DF + Sbjct: 60 YSDVITLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKR 96 >gi|50085939|ref|YP_047449.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] gi|49531915|emb|CAG69627.1| 50S ribosomal protein L25 [Acinetobacter sp. ADP1] Length = 103 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R++ GKG++R LR+ +PAIIYG ++P + + +++ K L + F Sbjct: 6 MANFVLNATARNEDKQGKGASRRLRREALVPAIIYGGEAEPVAVTIELRELVKALENNAF 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 66 FEEVVEVKVGDKVENVKIQALQRHPAKNTPMHADFKR 102 >gi|16273519|ref|NP_439772.1| 50S ribosomal protein L25 [Haemophilus influenzae Rd KW20] gi|260580405|ref|ZP_05848234.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260582164|ref|ZP_05849958.1| ribosomal protein L25P [Haemophilus influenzae NT127] gi|1173000|sp|P45281|RL25_HAEIN RecName: Full=50S ribosomal protein L25 gi|1574477|gb|AAC23277.1| ribosomal protein L25 (rpL25) [Haemophilus influenzae Rd KW20] gi|260093082|gb|EEW77016.1| 50S ribosomal protein L25 [Haemophilus influenzae RdAW] gi|260094796|gb|EEW78690.1| ribosomal protein L25P [Haemophilus influenzae NT127] Length = 95 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 52/92 (56%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG +P I L+ +++ ++F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEEPVSIILNHDELNNAQAHESFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|169796981|ref|YP_001714774.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332852069|ref|ZP_08433896.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332867467|ref|ZP_08437620.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] gi|169149908|emb|CAM87802.1| 50S ribosomal protein L25 [Acinetobacter baumannii AYE] gi|332729441|gb|EGJ60780.1| ribosomal L25p family protein [Acinetobacter baumannii 6013150] gi|332733884|gb|EGJ65029.1| ribosomal L25p family protein [Acinetobacter baumannii 6013113] Length = 103 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 6 MANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKALESNVF 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 66 FEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKR 102 >gi|113461016|ref|YP_719083.1| 50S ribosomal protein L25 [Haemophilus somnus 129PT] gi|170717588|ref|YP_001784672.1| 50S ribosomal protein L25 [Haemophilus somnus 2336] gi|123327292|sp|Q0I3J3|RL25_HAES1 RecName: Full=50S ribosomal protein L25 gi|189042361|sp|B0UU73|RL25_HAES2 RecName: Full=50S ribosomal protein L25 gi|112823059|gb|ABI25148.1| LSU ribosomal protein L25P [Haemophilus somnus 129PT] gi|168825717|gb|ACA31088.1| ribosomal protein L25 [Haemophilus somnus 2336] Length = 95 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 50/94 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K +A +R K GKG++R LR NGQIPAI+YG P I L+ +++ +F + Sbjct: 2 SFKFNAEVRSKQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQIHDSFYSDT 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + + V + Q P L+H DF +V Sbjct: 62 IILVIEGKEISVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|255327297|ref|ZP_05368371.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] gi|255295577|gb|EET74920.1| ribosomal L25p family protein [Rothia mucilaginosa ATCC 25296] Length = 94 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E K+ A R GKG AR R G+IPA+IYGN ++PK + L + + + Sbjct: 1 MAEIKIVAEPRVDFGKGYARRARVAGKIPAVIYGNGAEPKHVTLPGHETTLAVRQA---D 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +L +++ E + +D Q P+ L H D + V Sbjct: 58 AVLAIEVEGETIKARVQDIQRHPIRPELQHIDLVFV 93 >gi|238920497|ref|YP_002934012.1| hypothetical protein NT01EI_2608 [Edwardsiella ictaluri 93-146] gi|259646686|sp|C5BG54|RL25_EDWI9 RecName: Full=50S ribosomal protein L25 gi|238870066|gb|ACR69777.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 94 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG + L F T +L Sbjct: 2 FTINAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLDHDSTMNLSEKDGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + + V + Q P + H DF++ Sbjct: 62 TLSVDGKEIKVKIQAVQRHPYKPKITHIDFVR 93 >gi|299771339|ref|YP_003733365.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] gi|298701427|gb|ADI91992.1| 50S ribosomal protein L25 [Acinetobacter sp. DR1] Length = 98 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 L+A R DK GKG++R LR IPAIIYG ++P I L +++ K L + F Sbjct: 1 MANFVLNAQARAEDKQGKGASRRLRHEALIPAIIYGGNAEPVAITLELRELVKALENNAF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 61 FEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKR 97 >gi|145299053|ref|YP_001141894.1| 50S ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223659|sp|A4SMM4|RL25_AERS4 RecName: Full=50S ribosomal protein L25 gi|142851825|gb|ABO90146.1| ribosomal protein L25 [Aeromonas salmonicida subsp. salmonicida A449] Length = 95 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR Q+PAIIYG + + I + K F ++ Sbjct: 2 SFVFQAEVRSDLGKGASRRLRHADQVPAIIYGAGKEAQSITVDHKKFIIAQEKPEFYESV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I E V+V K Q PV L+H DF++V Sbjct: 62 LTLVINGEEVNVKVKAIQRHPVKPKLVHLDFVRV 95 >gi|32035070|ref|ZP_00135129.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207971|ref|YP_001053196.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae L20] gi|303250281|ref|ZP_07336481.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252046|ref|ZP_07533946.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166223658|sp|A3MZK5|RL25_ACTP2 RecName: Full=50S ribosomal protein L25 gi|126096763|gb|ABN73591.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650897|gb|EFL81053.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860515|gb|EFM92528.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 95 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 47/94 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|253688023|ref|YP_003017213.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646692|sp|C6DEJ2|RL25_PECCP RecName: Full=50S ribosomal protein L25 gi|251754601|gb|ACT12677.1| ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 94 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 43/93 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R GKG++R LR G+ PAI+YG P I L + + + F T L Sbjct: 2 ITIKAEVRKDQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEAKEGFYGTAL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|117619381|ref|YP_856743.1| ribosomal L25p family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560788|gb|ABK37736.1| ribosomal L25p family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 122 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 48/94 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR Q+PAI+YG + + I + K F ++ Sbjct: 29 SFVFQAEVRSDLGKGASRRLRHADQVPAIVYGAGKEAQSITVDHKKFILAQEKPEFYESV 88 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I E V+V K Q PV L+H DF++V Sbjct: 89 LTLVINGEEVNVKVKAIQRHPVRYKLVHLDFVRV 122 >gi|24373672|ref|NP_717715.1| ribosomal protein L25 [Shewanella oneidensis MR-1] gi|24348022|gb|AAN55159.1|AE015652_8 ribosomal protein L25 [Shewanella oneidensis MR-1] Length = 148 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T++ Sbjct: 55 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSV 114 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 115 VTIVLDGKEVGVRAQAMQRHAFKPIIEHVDF 145 >gi|322514160|ref|ZP_08067225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] gi|322119946|gb|EFX91948.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Actinobacillus ureae ATCC 25976] Length = 95 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 51/94 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L+ +++ F + + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIVLNHDNVNNAQIHDAFYSEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + HV + Q P L+H DF +V Sbjct: 62 LTIVVAGKEEHVKVQAIQRHPTKPKLVHLDFKRV 95 >gi|269139661|ref|YP_003296362.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|267985322|gb|ACY85151.1| 50S ribosomal protein L25 [Edwardsiella tarda EIB202] gi|304559531|gb|ADM42195.1| LSU ribosomal protein L25p [Edwardsiella tarda FL6-60] Length = 94 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR G+ PAI+YG + L F T IL Sbjct: 2 FTINAEVRNEQGKGASRRLRTAGKFPAIVYGGSEAALSVTLDHDTTMNMSEKDGFYTDIL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + + V + Q P + H DF++ Sbjct: 62 TLSVDGKEIKVKIQAVQRHPYKPKITHIDFVR 93 >gi|260550954|ref|ZP_05825159.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] gi|260405902|gb|EEW99389.1| 50S ribosomal protein L25 [Acinetobacter sp. RUH2624] Length = 103 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 3 QKECKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 +A R DK GKG++R LR+ +PAIIYG ++P + L +++ K L S F Sbjct: 6 MANFVFNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVSVTLELRELVKALESNAF 65 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 ++ + +G ++ +V + Q P + +HADF + Sbjct: 66 FEEVVEIKVGDKVENVKIQALQRHPSKNTPMHADFKR 102 >gi|242033675|ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] gi|241918086|gb|EER91230.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor] Length = 240 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 18/200 (9%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-------GNMSDPKPIALSAKDI--SKRLYS 57 + AV R+ G +A R++G++PA++ GN + + + + S Sbjct: 35 TIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRQLLTADRRQLAEMLKQS 94 Query: 58 KNFMTTILTLDIGKELV--------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 F++T + L + V+P D S +++ ++ EG+ + V +P Sbjct: 95 PYFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDETSGNILNLVMVKADEGTMLKVDLP 154 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 V F E+ PG+K+GG L + + LCPA +IP I VDL +L +GD + M DI + Sbjct: 155 VEFKGEDTCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHP 214 Query: 170 KTSSMSQLNI-TIATIVAPI 188 +S+ I I+A Sbjct: 215 SLKLLSKNETMPICKILASK 234 >gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] gi|91073049|gb|ABE07930.1| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|307554254|gb|ADN47029.1| 50S ribosomal subunit protein L25 [Escherichia coli ABU 83972] Length = 126 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 47/94 (50%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 + ++A +R + GKG++R LR + PAIIYG P + L + F + Sbjct: 32 EMFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSE 91 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +LT+ + + + V +D Q P L+H DF++ Sbjct: 92 VLTIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 125 >gi|157375586|ref|YP_001474186.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] gi|189042373|sp|A8FW35|RL25_SHESH RecName: Full=50S ribosomal protein L25 gi|157317960|gb|ABV37058.1| ribosomal protein L25 [Shewanella sediminis HAW-EB3] Length = 95 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 48/92 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F ++ Sbjct: 2 SYTIAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKEPISIKFDHKDIINIQENADFYSSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ + + V V + Q ++ H DF Sbjct: 62 LTITVDGKDVKVRVQAMQRHAFKGLIEHIDFK 93 >gi|308049140|ref|YP_003912706.1| 50S ribosomal protein L25P [Ferrimonas balearica DSM 9799] gi|307631330|gb|ADN75632.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799] Length = 95 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 42/94 (44%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R GKG++R LR G IPAIIYG ++P I L I F T Sbjct: 2 SFVFEAKVRTDAGKGASRRLRHAGLIPAIIYGGNAEPVSIELDHDKILHAQDEDAFYTAE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P + H DF +V Sbjct: 62 LTIVVDGKEEKVKAQAMQRHPYKPKVTHIDFKRV 95 >gi|311113110|ref|YP_003984332.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] gi|310944604|gb|ADP40898.1| ribosomal L25p family protein [Rothia dentocariosa ATCC 17931] Length = 98 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 2 DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E K++A R GKG AR +R G IPA+IYGN +PK + L + + +K Sbjct: 4 TMSEIKITAEPRTDFGKGYARRIRAVGDIPAVIYGNGKEPKHVILPGHATTMAVRNK--- 60 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 +L +++ E +D Q P+ L H D L V Sbjct: 61 DVVLVIEVDGEQFKTRVQDIQRHPIRPELQHIDLLFVD 98 >gi|152979370|ref|YP_001344999.1| 50S ribosomal protein L25 [Actinobacillus succinogenes 130Z] gi|171704325|sp|A6VQ17|RL25_ACTSZ RecName: Full=50S ribosomal protein L25 gi|150841093|gb|ABR75064.1| ribosomal protein L25 [Actinobacillus succinogenes 130Z] Length = 95 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 50/92 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDELNNAQVHDSFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V V + Q P L+H DF + Sbjct: 63 TLVIDGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|307245327|ref|ZP_07527415.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254280|ref|ZP_07536120.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258740|ref|ZP_07540472.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853668|gb|EFM85885.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862759|gb|EFM94713.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867091|gb|EFM98947.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 95 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 47/94 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|33152342|ref|NP_873695.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] gi|68053197|sp|Q7VLY6|RL25_HAEDU RecName: Full=50S ribosomal protein L25 gi|33148565|gb|AAP96084.1| 50S ribosomal protein L25 [Haemophilus ducreyi 35000HP] Length = 95 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNVQIHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + ++ V V + Q P L+H DF +V Sbjct: 62 LTIVLAEKEVQVKVQAIQRHPTKPKLLHLDFKRV 95 >gi|320539362|ref|ZP_08039031.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] gi|320030487|gb|EFW12497.1| putative 50S ribosomal subunit protein L25 [Serratia symbiotica str. Tucson] Length = 94 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG P I L + F + + Sbjct: 2 FTINAQVRKEQGKGASRRLRAANKFPAIVYGGEEAPVSIELGQDYVKNMAVKPEFYSKTI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + +V + Q P L H DF++V Sbjct: 62 TLVIDGKETNVKVQAIQRHPFKPKLTHIDFVRV 94 >gi|126174127|ref|YP_001050276.1| 50S ribosomal protein L25 [Shewanella baltica OS155] gi|153000452|ref|YP_001366133.1| 50S ribosomal protein L25 [Shewanella baltica OS185] gi|160875049|ref|YP_001554365.1| 50S ribosomal protein L25 [Shewanella baltica OS195] gi|217973559|ref|YP_002358310.1| 50S ribosomal protein L25 [Shewanella baltica OS223] gi|304411331|ref|ZP_07392945.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|307305347|ref|ZP_07585095.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|166223718|sp|A3D3U4|RL25_SHEB5 RecName: Full=50S ribosomal protein L25 gi|166223719|sp|A6WMN1|RL25_SHEB8 RecName: Full=50S ribosomal protein L25 gi|189042370|sp|A9KZ17|RL25_SHEB9 RecName: Full=50S ribosomal protein L25 gi|254801061|sp|B8E7C8|RL25_SHEB2 RecName: Full=50S ribosomal protein L25 gi|125997332|gb|ABN61407.1| LSU ribosomal protein L25P [Shewanella baltica OS155] gi|151365070|gb|ABS08070.1| ribosomal protein L25 [Shewanella baltica OS185] gi|160860571|gb|ABX49105.1| ribosomal protein L25 [Shewanella baltica OS195] gi|217498694|gb|ACK46887.1| ribosomal protein L25 [Shewanella baltica OS223] gi|304350186|gb|EFM14590.1| Ribosomal protein L25-like protein [Shewanella baltica OS183] gi|306911650|gb|EFN42075.1| Ribosomal protein L25-like protein [Shewanella baltica BA175] gi|315267281|gb|ADT94134.1| Ribosomal protein L25-like protein [Shewanella baltica OS678] Length = 95 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 47/91 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T+ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFDHKDIINIQANADFYTST 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V V + Q ++ H DF Sbjct: 62 LTIVVDGKEVGVRAQAMQRHVFKPLIEHVDF 92 >gi|261867995|ref|YP_003255917.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293389976|ref|ZP_06634310.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413327|gb|ACX82698.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290950510|gb|EFE00629.1| 50S ribosomal protein L25 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 95 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F + ++ Sbjct: 3 FKFNAEVRTAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDVNNAQVHDTFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I ++ V V + Q P L+H DF +V Sbjct: 63 TLVIDEKEVAVKVQAMQRHPFKPKLVHIDFKRV 95 >gi|52425171|ref|YP_088308.1| 50S ribosomal protein L25 [Mannheimia succiniciproducens MBEL55E] gi|68053090|sp|Q65TI7|RL25_MANSM RecName: Full=50S ribosomal protein L25 gi|52307223|gb|AAU37723.1| RplY protein [Mannheimia succiniciproducens MBEL55E] Length = 95 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 50/92 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG D I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRSAQGKGASRRLRHNGQIPAIVYGGNEDAVSIVLNHDELNNAQAHDSFYSEVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V V + Q P L+H DF + Sbjct: 63 TLVINGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|15602504|ref|NP_245576.1| 50S ribosomal protein L25 [Pasteurella multocida subsp. multocida str. Pm70] gi|68053230|sp|Q9CN10|RL25_PASMU RecName: Full=50S ribosomal protein L25 gi|12720914|gb|AAK02723.1| RpL25 [Pasteurella multocida subsp. multocida str. Pm70] Length = 94 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 50/93 (53%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ F T ++ Sbjct: 2 FKFNAEVRQSQGKGASRRLRHNGQIPAIVYGGSEAPVSIVLNHDDLNNAQVHDAFYTDVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 62 TLVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|6980397|pdb|1B75|A Chain A, Solution Structure Of Ribosomal Protein L25 From Escherichia Coli Length = 94 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|293977771|ref|YP_003543201.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri DMIN] gi|292667702|gb|ADE35337.1| ribosomal protein L25, Ctc-form [Candidatus Sulcia muelleri DMIN] Length = 186 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 7/165 (4%) Query: 20 SARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPK 79 + R LR G IP I+YG + + K +Y+ + + + + K Sbjct: 18 NNRELRNYGYIPCIVYGINK-NIKFYILLSILKKVIYTFKVYKLEIK---NEYKIEALLK 73 Query: 80 DYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP 139 + Q +P++D +IH DF ++ + + + V I+ S G+ +GG+ + +++L Sbjct: 74 EIQFNPINDDVIHVDFYELKKNK--YIIISVPIISVGHSLGVSKGGEYKIFIKKINLKVI 131 Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I D + +D+++L IGD++ +++I P+ + N IA++ Sbjct: 132 PEFILDHMDIDISNLDIGDNLSIKNIYNPK-YIILHNCNDVIASV 175 >gi|261821188|ref|YP_003259294.1| 50S ribosomal protein L25 [Pectobacterium wasabiae WPP163] gi|261605201|gb|ACX87687.1| Ribosomal protein L25-like protein [Pectobacterium wasabiae WPP163] Length = 94 Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + F L Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKDGFYGETL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|165975947|ref|YP_001651540.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149834|ref|YP_001968359.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252157|ref|ZP_07338325.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247493|ref|ZP_07529538.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249726|ref|ZP_07531705.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307256542|ref|ZP_07538323.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260973|ref|ZP_07542655.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263155|ref|ZP_07544776.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226736271|sp|B3GX65|RL25_ACTP7 RecName: Full=50S ribosomal protein L25 gi|226736272|sp|B0BU91|RL25_ACTPJ RecName: Full=50S ribosomal protein L25 gi|165876048|gb|ABY69096.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914965|gb|ACE61217.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648940|gb|EFL79128.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855996|gb|EFM88154.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858234|gb|EFM90311.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864952|gb|EFM96854.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869275|gb|EFN01070.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871517|gb|EFN03240.1| 50S ribosomal protein L25 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 95 Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 LT+ + + V + Q P L+H DF + Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKR 94 >gi|50121669|ref|YP_050836.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] gi|68053132|sp|Q6D3J9|RL25_ERWCT RecName: Full=50S ribosomal protein L25 gi|49612195|emb|CAG75645.1| 50S ribosomal protein L25 [Pectobacterium atrosepticum SCRI1043] Length = 94 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + + F L Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVQVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|262376651|ref|ZP_06069879.1| ribosomal L25p [Acinetobacter lwoffii SH145] gi|262308361|gb|EEY89496.1| ribosomal L25p [Acinetobacter lwoffii SH145] Length = 101 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 1 MD-QKECKLSAVMRDK--VGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 M L+A R++ GKG++R LR ++PAIIYG + P I + + + K L + Sbjct: 1 MSIMANFVLNAAAREEAVQGKGASRRLRLQAKVPAIIYGGEAAPVAITVELRQLVKFLEN 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +F ++ +D+ ++ V + Q P + +HADF + Sbjct: 61 NSFFEEVIEIDVDGKVESVKIQALQRHPAKNTPMHADFKR 100 >gi|194434195|ref|ZP_03066462.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|194417524|gb|EDX33626.1| ribosomal L25p family [Shigella dysenteriae 1012] gi|332096170|gb|EGJ01173.1| ribosomal L25p family protein [Shigella dysenteriae 155-74] Length = 94 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSKVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|16130123|ref|NP_416690.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30063628|ref|NP_837799.1| 50S ribosomal protein L25 [Shigella flexneri 2a str. 2457T] gi|56480061|ref|NP_708084.2| 50S ribosomal protein L25 [Shigella flexneri 2a str. 301] gi|74312706|ref|YP_311125.1| 50S ribosomal protein L25 [Shigella sonnei Ss046] gi|82776212|ref|YP_402561.1| 50S ribosomal protein L25 [Shigella dysenteriae Sd197] gi|89109003|ref|AP_002783.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. W3110] gi|157158450|ref|YP_001463538.1| 50S ribosomal protein L25 [Escherichia coli E24377A] gi|157161667|ref|YP_001458985.1| 50S ribosomal protein L25 [Escherichia coli HS] gi|170019498|ref|YP_001724452.1| 50S ribosomal protein L25 [Escherichia coli ATCC 8739] gi|170081807|ref|YP_001731127.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188493756|ref|ZP_03001026.1| ribosomal L25p family [Escherichia coli 53638] gi|191165343|ref|ZP_03027185.1| ribosomal L25p family [Escherichia coli B7A] gi|193062225|ref|ZP_03043320.1| ribosomal L25p family [Escherichia coli E22] gi|193068236|ref|ZP_03049200.1| ribosomal L25p family [Escherichia coli E110019] gi|194427121|ref|ZP_03059672.1| ribosomal L25p family [Escherichia coli B171] gi|194436155|ref|ZP_03068257.1| ribosomal L25p family [Escherichia coli 101-1] gi|209919645|ref|YP_002293729.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218554755|ref|YP_002387668.1| 50S ribosomal protein L25 [Escherichia coli IAI1] gi|218695800|ref|YP_002403467.1| 50S ribosomal protein L25 [Escherichia coli 55989] gi|229774940|ref|YP_689684.2| 50S ribosomal protein L25 [Shigella flexneri 5 str. 8401] gi|238901362|ref|YP_002927158.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|253772888|ref|YP_003035719.1| 50S ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162200|ref|YP_003045308.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|256017646|ref|ZP_05431511.1| 50S ribosomal protein L25 [Shigella sp. D9] gi|256022130|ref|ZP_05435995.1| 50S ribosomal protein L25 [Escherichia sp. 4_1_40B] gi|260844791|ref|YP_003222569.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|260856159|ref|YP_003230050.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|260868886|ref|YP_003235288.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|291283439|ref|YP_003500257.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|293415471|ref|ZP_06658114.1| ribosomal L25p family protein [Escherichia coli B185] gi|293446537|ref|ZP_06662959.1| ribosomal L25p family protein [Escherichia coli B088] gi|297521512|ref|ZP_06939898.1| 50S ribosomal protein L25 [Escherichia coli OP50] gi|300819118|ref|ZP_07099320.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300822638|ref|ZP_07102776.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300902162|ref|ZP_07120162.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300918833|ref|ZP_07135402.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300926293|ref|ZP_07142096.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300930421|ref|ZP_07145830.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300950050|ref|ZP_07163997.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300956856|ref|ZP_07169116.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|301024317|ref|ZP_07188006.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|301306202|ref|ZP_07212277.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|301328669|ref|ZP_07221730.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301644211|ref|ZP_07244219.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|307138845|ref|ZP_07498201.1| 50S ribosomal protein L25 [Escherichia coli H736] gi|307311235|ref|ZP_07590879.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|309786647|ref|ZP_07681267.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309793069|ref|ZP_07687497.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|312973561|ref|ZP_07787733.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|331642814|ref|ZP_08343949.1| ribosomal L25p family protein [Escherichia coli H736] gi|331653619|ref|ZP_08354620.1| ribosomal L25p family protein [Escherichia coli M718] gi|331668889|ref|ZP_08369737.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331678139|ref|ZP_08378814.1| ribosomal L25p family protein [Escherichia coli H591] gi|60393657|sp|P68918|RL25_SHIFL RecName: Full=50S ribosomal protein L25 gi|60393658|sp|P68919|RL25_ECOLI RecName: Full=50S ribosomal protein L25 gi|109893395|sp|Q32HY5|RL25_SHIDS RecName: Full=50S ribosomal protein L25 gi|109893396|sp|Q3Z022|RL25_SHISS RecName: Full=50S ribosomal protein L25 gi|166987891|sp|A7ZP09|RL25_ECO24 RecName: Full=50S ribosomal protein L25 gi|166987892|sp|A8A248|RL25_ECOHS RecName: Full=50S ribosomal protein L25 gi|189042355|sp|B1IY84|RL25_ECOLC RecName: Full=50S ribosomal protein L25 gi|226736315|sp|B7M535|RL25_ECO8A RecName: Full=50S ribosomal protein L25 gi|226736316|sp|B1X883|RL25_ECODH RecName: Full=50S ribosomal protein L25 gi|226736318|sp|B6I184|RL25_ECOSE RecName: Full=50S ribosomal protein L25 gi|254801046|sp|B7LAK9|RL25_ECO55 RecName: Full=50S ribosomal protein L25 gi|259646685|sp|C4ZU30|RL25_ECOBW RecName: Full=50S ribosomal protein L25 gi|6573331|pdb|1D6K|A Chain A, Nmr Solution Structure Of The 5s Rrna E-LoopL25 COMPLEX gi|6730329|pdb|1DFU|P Chain P, Crystal Structure Of E.Coli Ribosomal Protein L25 Complexed With A 5s Rrna Fragment At 1.8 A Resolution gi|14278052|pdb|1GIY|V Chain V, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix gi|28373738|pdb|1ML5|VV Chain v, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|33357920|pdb|1P85|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357948|pdb|1P86|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754063|pdb|2AW4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754119|pdb|2AWB|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666572|pdb|1VS6|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666624|pdb|1VS8|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116667453|pdb|2GYA|T Chain T, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667505|pdb|2GYC|T Chain T, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|118138112|pdb|2I2T|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138166|pdb|2I2V|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|119390366|pdb|2J28|V Chain V, Model Of E. Coli Srp Bound To 70s Rncs gi|157836058|pdb|2QOV|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836110|pdb|2QOX|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836162|pdb|2QOZ|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836214|pdb|2QP1|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157884251|pdb|487D|N Chain N, Seven Ribosomal Proteins Fitted To A Cryo-Electron Microscopic Map Of The Large 50s Subunit At 7.5 Angstroms Resolution gi|158429733|pdb|2QAM|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429785|pdb|2QAO|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429843|pdb|2QBA|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429895|pdb|2QBC|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429947|pdb|2QBE|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430000|pdb|2QBG|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430053|pdb|2QBI|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430106|pdb|2QBK|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431406|pdb|2Z4L|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431459|pdb|2Z4N|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988752|pdb|2VHM|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) gi|168988783|pdb|2VHN|V Chain V, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) gi|169404604|pdb|2RDO|V Chain V, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound gi|197107302|pdb|3DF2|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107354|pdb|3DF4|V Chain V, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|209870355|pdb|3BBX|V Chain V, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex gi|224510751|pdb|3FIK|V Chain V, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|256032375|pdb|3E1B|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre- Accommodation State gi|256032432|pdb|3E1D|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In Post- Accommodation State gi|257097363|pdb|3I1N|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097415|pdb|3I1P|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097469|pdb|3I1R|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097523|pdb|3I1T|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097578|pdb|3I20|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097633|pdb|3I22|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560353|pdb|3KCR|V Chain V, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|294662272|pdb|2WWQ|W Chain W, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308198376|pdb|1VT2|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198750|pdb|3ORB|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|308388028|pdb|3OFQ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388059|pdb|3OFR|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320086|pdb|3OFC|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320117|pdb|3OFD|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320190|pdb|3OFZ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320221|pdb|3OG0|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113675|pdb|3OAS|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113706|pdb|3OAT|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|326634231|pdb|3IZT|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634264|pdb|3IZU|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|329666037|pdb|3J01|V Chain V, Structure Of The Ribosome-Secye Complex In The Membrane Environment gi|216640|dbj|BAA02585.1| ribosomal protein L25 [Escherichia coli] gi|1788512|gb|AAC75246.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. MG1655] gi|30041881|gb|AAP17608.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 2457T] gi|56383612|gb|AAN43791.2| 50S ribosomal subunit protein L25 [Shigella flexneri 2a str. 301] gi|73856183|gb|AAZ88890.1| 50S ribosomal subunit protein L25 [Shigella sonnei Ss046] gi|81240360|gb|ABB61070.1| 50S ribosomal subunit protein L25 [Shigella dysenteriae Sd197] gi|85675294|dbj|BAE76650.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K12 substr. W3110] gi|157067347|gb|ABV06602.1| ribosomal L25p family [Escherichia coli HS] gi|157080480|gb|ABV20188.1| ribosomal L25p family [Escherichia coli E24377A] gi|169754426|gb|ACA77125.1| ribosomal protein L25 [Escherichia coli ATCC 8739] gi|169889642|gb|ACB03349.1| 50S ribosomal subunit protein L25 [Escherichia coli str. K-12 substr. DH10B] gi|188488955|gb|EDU64058.1| ribosomal L25p family [Escherichia coli 53638] gi|190904506|gb|EDV64213.1| ribosomal L25p family [Escherichia coli B7A] gi|192931891|gb|EDV84490.1| ribosomal L25p family [Escherichia coli E22] gi|192958515|gb|EDV88954.1| ribosomal L25p family [Escherichia coli E110019] gi|194414742|gb|EDX31013.1| ribosomal L25p family [Escherichia coli B171] gi|194424883|gb|EDX40868.1| ribosomal L25p family [Escherichia coli 101-1] gi|209765898|gb|ACI81261.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765904|gb|ACI81264.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209912904|dbj|BAG77978.1| 50S ribosomal protein L25 [Escherichia coli SE11] gi|218352532|emb|CAU98309.1| 50S ribosomal subunit protein L25 [Escherichia coli 55989] gi|218361523|emb|CAQ99112.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI1] gi|238859864|gb|ACR61862.1| 50S ribosomal subunit protein L25 [Escherichia coli BW2952] gi|242377824|emb|CAQ32591.1| 50S ribosomal subunit protein L25, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253323932|gb|ACT28534.1| ribosomal protein L25 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974101|gb|ACT39772.1| 50S ribosomal protein L25 [Escherichia coli B str. REL606] gi|253978268|gb|ACT43938.1| 50S ribosomal protein L25 [Escherichia coli BL21(DE3)] gi|257754808|dbj|BAI26310.1| 50S ribosomal subunit protein L25 [Escherichia coli O26:H11 str. 11368] gi|257759938|dbj|BAI31435.1| 50S ribosomal subunit protein L25 [Escherichia coli O103:H2 str. 12009] gi|257765242|dbj|BAI36737.1| 50S ribosomal subunit protein L25 [Escherichia coli O111:H- str. 11128] gi|260448720|gb|ACX39142.1| ribosomal protein L25 [Escherichia coli DH1] gi|290763312|gb|ADD57273.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. CB9615] gi|291323367|gb|EFE62795.1| ribosomal L25p family protein [Escherichia coli B088] gi|291433119|gb|EFF06098.1| ribosomal L25p family protein [Escherichia coli B185] gi|299880414|gb|EFI88625.1| ribosomal L25p family protein [Escherichia coli MS 196-1] gi|300316337|gb|EFJ66121.1| ribosomal L25p family protein [Escherichia coli MS 175-1] gi|300405681|gb|EFJ89219.1| ribosomal L25p family protein [Escherichia coli MS 84-1] gi|300414076|gb|EFJ97386.1| ribosomal L25p family protein [Escherichia coli MS 115-1] gi|300417722|gb|EFK01033.1| ribosomal L25p family protein [Escherichia coli MS 182-1] gi|300450540|gb|EFK14160.1| ribosomal L25p family protein [Escherichia coli MS 116-1] gi|300461743|gb|EFK25236.1| ribosomal L25p family protein [Escherichia coli MS 187-1] gi|300524838|gb|EFK45907.1| ribosomal L25p family protein [Escherichia coli MS 119-7] gi|300528271|gb|EFK49333.1| ribosomal L25p family protein [Escherichia coli MS 107-1] gi|300838568|gb|EFK66328.1| ribosomal L25p family protein [Escherichia coli MS 124-1] gi|300845061|gb|EFK72821.1| ribosomal L25p family protein [Escherichia coli MS 78-1] gi|301077509|gb|EFK92315.1| ribosomal L25p family protein [Escherichia coli MS 146-1] gi|306908741|gb|EFN39238.1| Ribosomal protein L25-like protein [Escherichia coli W] gi|308123355|gb|EFO60617.1| ribosomal L25p family protein [Escherichia coli MS 145-7] gi|308925340|gb|EFP70827.1| ribosomal L25p family protein [Shigella dysenteriae 1617] gi|309702500|emb|CBJ01826.1| 50S ribosomal protein L25 [Escherichia coli ETEC H10407] gi|310332156|gb|EFP99391.1| ribosomal L25p family protein [Escherichia coli 1827-70] gi|313651299|gb|EFS15697.1| ribosomal L25p family protein [Shigella flexneri 2a str. 2457T] gi|315061495|gb|ADT75822.1| 50S ribosomal subunit protein L25 [Escherichia coli W] gi|315136819|dbj|BAJ43978.1| 50S ribosomal protein L25 [Escherichia coli DH1] gi|315255299|gb|EFU35267.1| ribosomal L25p family protein [Escherichia coli MS 85-1] gi|315615431|gb|EFU96063.1| ribosomal L25p family protein [Escherichia coli 3431] gi|320178859|gb|EFW53822.1| LSU ribosomal protein L25p [Shigella boydii ATCC 9905] gi|320184701|gb|EFW59494.1| LSU ribosomal protein L25p [Shigella flexneri CDC 796-83] gi|320199783|gb|EFW74372.1| LSU ribosomal protein L25p [Escherichia coli EC4100B] gi|320641256|gb|EFX10734.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. G5101] gi|320646645|gb|EFX15556.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. 493-89] gi|320651900|gb|EFX20275.1| 50S ribosomal protein L25 [Escherichia coli O157:H- str. H 2687] gi|320657625|gb|EFX25423.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663230|gb|EFX30539.1| 50S ribosomal protein L25 [Escherichia coli O55:H7 str. USDA 5905] gi|320667981|gb|EFX34884.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. LSU-61] gi|323152227|gb|EFZ38517.1| ribosomal L25p family protein [Escherichia coli EPECa14] gi|323161737|gb|EFZ47619.1| ribosomal L25p family protein [Escherichia coli E128010] gi|323168666|gb|EFZ54346.1| ribosomal L25p family protein [Shigella sonnei 53G] gi|323171838|gb|EFZ57482.1| ribosomal L25p family protein [Escherichia coli LT-68] gi|323176914|gb|EFZ62504.1| ribosomal L25p family protein [Escherichia coli 1180] gi|323184189|gb|EFZ69566.1| ribosomal L25p family protein [Escherichia coli 1357] gi|323377924|gb|ADX50192.1| Ribosomal protein L25-like protein [Escherichia coli KO11] gi|323936802|gb|EGB33087.1| ribosomal L25p family protein [Escherichia coli E1520] gi|323940744|gb|EGB36932.1| ribosomal L25p family protein [Escherichia coli E482] gi|323945002|gb|EGB41067.1| ribosomal L25p family protein [Escherichia coli H120] gi|323961579|gb|EGB57186.1| ribosomal L25p family protein [Escherichia coli H489] gi|323972932|gb|EGB68129.1| ribosomal L25p family protein [Escherichia coli TA007] gi|324020659|gb|EGB89878.1| ribosomal L25p family protein [Escherichia coli MS 117-3] gi|324117974|gb|EGC11873.1| ribosomal L25p family protein [Escherichia coli E1167] gi|331039612|gb|EGI11832.1| ribosomal L25p family protein [Escherichia coli H736] gi|331048468|gb|EGI20544.1| ribosomal L25p family protein [Escherichia coli M718] gi|331064083|gb|EGI35994.1| ribosomal L25p family protein [Escherichia coli TA271] gi|331074599|gb|EGI45919.1| ribosomal L25p family protein [Escherichia coli H591] gi|332343967|gb|AEE57301.1| ribosomal protein [Escherichia coli UMNK88] gi|332754828|gb|EGJ85193.1| ribosomal L25p family protein [Shigella flexneri 4343-70] gi|332755232|gb|EGJ85596.1| ribosomal L25p family protein [Shigella flexneri K-671] gi|332756582|gb|EGJ86933.1| ribosomal L25p family protein [Shigella flexneri 2747-71] gi|332765999|gb|EGJ96209.1| 50S ribosomal subunit protein L25 [Shigella flexneri 2930-71] gi|333001326|gb|EGK20894.1| ribosomal L25p family protein [Shigella flexneri VA-6] gi|333001995|gb|EGK21561.1| ribosomal L25p family protein [Shigella flexneri K-218] gi|333002910|gb|EGK22466.1| ribosomal L25p family protein [Shigella flexneri K-272] gi|333016627|gb|EGK35956.1| ribosomal L25p family protein [Shigella flexneri K-304] gi|333016914|gb|EGK36238.1| ribosomal L25p family protein [Shigella flexneri K-227] gi|227856|prf||1712317A ribosomal protein L25 gi|229550|prf||754714A ribosomal protein L25 Length = 94 Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|254360491|ref|ZP_04976640.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261492283|ref|ZP_05988846.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494504|ref|ZP_05990990.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091031|gb|EDN73036.1| ribosomal protein L25 [Mannheimia haemolytica PHL213] gi|261309888|gb|EEY11105.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312062|gb|EEY13202.1| ribosomal protein L25 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 95 Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 47/93 (50%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++P I L ++ +F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILDHDKVNNAQVHDSFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 LT+ + + V + Q P L+H DF + Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKR 94 >gi|149910383|ref|ZP_01899025.1| RplY protein [Moritella sp. PE36] gi|149806531|gb|EDM66500.1| RplY protein [Moritella sp. PE36] Length = 95 Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 44/93 (47%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 A +R +GKG++R LR + PA+IYG + I L ++ ++ F +++ Sbjct: 2 SFTFEAQVRSDLGKGASRRLRHANKFPAVIYGKGEEAISIELEHDVVNNAQRNEEFFSSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 +TL + + V K Q + H DF++ Sbjct: 62 ITLVVDGTEMAVTVKAMQRHAFKPKVQHIDFIR 94 >gi|227357714|ref|ZP_03842063.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] gi|227162043|gb|EEI47057.1| 50S ribosomal protein L25 [Proteus mirabilis ATCC 29906] Length = 104 Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 44/94 (46%) Query: 4 KECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 K ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F Sbjct: 10 KMLTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYAD 69 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + L I + V K Q + H DFL+ Sbjct: 70 FVNLVIDGKATKVKVKAVQRHEYKPKITHIDFLR 103 >gi|332093192|gb|EGI98252.1| ribosomal L25p family protein [Shigella boydii 5216-82] Length = 94 Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L+ + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELAHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|219870871|ref|YP_002475246.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] gi|254801050|sp|B8F4P6|RL25_HAEPS RecName: Full=50S ribosomal protein L25 gi|219691075|gb|ACL32298.1| 50S ribosomal protein L25 [Haemophilus parasuis SH0165] Length = 95 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 46/94 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQAHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|15802741|ref|NP_288768.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 EDL933] gi|15832331|ref|NP_311104.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187775726|ref|ZP_02798101.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188024890|ref|ZP_02774614.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189010144|ref|ZP_02805045.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189402686|ref|ZP_02784079.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189403055|ref|ZP_02792816.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189404570|ref|ZP_02790366.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189405210|ref|ZP_02814011.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189406271|ref|ZP_02827407.2| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|195935567|ref|ZP_03080949.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. EC4024] gi|208807041|ref|ZP_03249378.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208813367|ref|ZP_03254696.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208819050|ref|ZP_03259370.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209398752|ref|YP_002271599.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|217327947|ref|ZP_03444030.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254794086|ref|YP_003078923.1| 50S ribosomal protein L25 [Escherichia coli O157:H7 str. TW14359] gi|261223354|ref|ZP_05937635.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK2000] gi|261259095|ref|ZP_05951628.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. FRIK966] gi|68053224|sp|Q8XE69|RL25_ECO57 RecName: Full=50S ribosomal protein L25 gi|226736313|sp|B5YWX8|RL25_ECO5E RecName: Full=50S ribosomal protein L25 gi|12516517|gb|AAG57323.1|AE005451_4 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. EDL933] gi|13362546|dbj|BAB36500.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. Sakai] gi|187771079|gb|EDU34923.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4196] gi|188016119|gb|EDU54241.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4113] gi|189001900|gb|EDU70886.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4076] gi|189354272|gb|EDU72691.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4401] gi|189362864|gb|EDU81283.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4486] gi|189364889|gb|EDU83305.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC4501] gi|189371388|gb|EDU89804.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC869] gi|189375583|gb|EDU93999.1| ribosomal L25p family [Escherichia coli O157:H7 str. EC508] gi|208726842|gb|EDZ76443.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4206] gi|208734644|gb|EDZ83331.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4045] gi|208739173|gb|EDZ86855.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4042] gi|209160152|gb|ACI37585.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. EC4115] gi|209765900|gb|ACI81262.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765902|gb|ACI81263.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|209765906|gb|ACI81265.1| 50S ribosomal subunit protein L25 [Escherichia coli] gi|217320314|gb|EEC28739.1| ribosomal L25p family protein [Escherichia coli O157:H7 str. TW14588] gi|254593486|gb|ACT72847.1| 50S ribosomal subunit protein L25 [Escherichia coli O157:H7 str. TW14359] gi|320192186|gb|EFW66831.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. EC1212] gi|326339541|gb|EGD63352.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1125] gi|326344002|gb|EGD67763.1| LSU ribosomal protein L25p [Escherichia coli O157:H7 str. 1044] Length = 94 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNIQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|301156484|emb|CBW15955.1| 50S ribosomal subunit protein L25 [Haemophilus parainfluenzae T3T1] Length = 95 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 50/92 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAIIYG P I L+ +++ +F + ++ Sbjct: 3 FKFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQVHDSFYSDVI 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q P L+H DF + Sbjct: 63 TLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKR 94 >gi|170726508|ref|YP_001760534.1| 50S ribosomal protein L25 [Shewanella woodyi ATCC 51908] gi|226736368|sp|B1KDP2|RL25_SHEWM RecName: Full=50S ribosomal protein L25 gi|169811855|gb|ACA86439.1| ribosomal protein L25 [Shewanella woodyi ATCC 51908] Length = 95 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG +P I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHADKVPAVIYGPGKEPVAIVFDHKDIINIQENEDFYTST 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 LT+++ V V K Q ++ H DF Sbjct: 62 LTINLDGSDVKVSVKAMQRHAFKPLIEHVDFTY 94 >gi|187731625|ref|YP_001879482.1| 50S ribosomal protein L25 [Shigella boydii CDC 3083-94] gi|226736369|sp|B2TV63|RL25_SHIB3 RecName: Full=50S ribosomal protein L25 gi|187428617|gb|ACD07891.1| ribosomal L25p family [Shigella boydii CDC 3083-94] Length = 94 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVINMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|261340617|ref|ZP_05968475.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] gi|288317028|gb|EFC55966.1| ribosomal L25p family protein [Enterobacter cancerogenus ATCC 35316] Length = 94 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRNANKFPAIVYGGEAAPVAIELDHDKVWNMQTKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ +G + V + Q P L H DF++ Sbjct: 62 TIVVGGKEEKVKVQAVQRHPFKPKLSHIDFVR 93 >gi|229508247|ref|ZP_04397752.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229511514|ref|ZP_04400993.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229515036|ref|ZP_04404496.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229518653|ref|ZP_04408096.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229520761|ref|ZP_04410184.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229529327|ref|ZP_04418717.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229607821|ref|YP_002878469.1| 50S ribosomal protein L25 [Vibrio cholerae MJ-1236] gi|229333101|gb|EEN98587.1| LSU ribosomal protein L25p [Vibrio cholerae 12129(1)] gi|229342316|gb|EEO07311.1| LSU ribosomal protein L25p [Vibrio cholerae TM 11079-80] gi|229343342|gb|EEO08317.1| LSU ribosomal protein L25p [Vibrio cholerae RC9] gi|229347741|gb|EEO12700.1| LSU ribosomal protein L25p [Vibrio cholerae TMA 21] gi|229351479|gb|EEO16420.1| LSU ribosomal protein L25p [Vibrio cholerae B33] gi|229355752|gb|EEO20673.1| LSU ribosomal protein L25p [Vibrio cholerae BX 330286] gi|229370476|gb|ACQ60899.1| LSU ribosomal protein L25p [Vibrio cholerae MJ-1236] Length = 97 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNF 60 M K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F Sbjct: 1 MRVNTMKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEF 60 Query: 61 MTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V V P+D Q + H DF+++ Sbjct: 61 YEA-IVLVIDGQEVKVKPQDVQRHAYKPKVEHMDFIRI 97 >gi|262369401|ref|ZP_06062729.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] gi|262315469|gb|EEY96508.1| ribosomal L25p family protein [Acinetobacter johnsonii SH046] Length = 101 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 1 MD-QKECKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYS 57 M L+A R+ GKG++R LR Q+PAIIYG + P + L +++ K L + Sbjct: 1 MSIMANFVLNAQAREAANQGKGASRRLRHAAQVPAIIYGGTAKPVAVTLELRELVKALEN 60 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 F ++ + +G ++ V K Q P + +HADF++ Sbjct: 61 NAFFEEVVEIKVGDKVESVKIKALQRHPAKNTPMHADFVR 100 >gi|320174781|gb|EFW49907.1| LSU ribosomal protein L25p [Shigella dysenteriae CDC 74-1112] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKAAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|226330603|ref|ZP_03806121.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] gi|225201398|gb|EEG83752.1| hypothetical protein PROPEN_04521 [Proteus penneri ATCC 35198] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + + Sbjct: 2 LTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYSDFV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V K Q + H DFL+ Sbjct: 62 NLVIDGKETKVKVKAVQRHEYKPKITHIDFLR 93 >gi|82544597|ref|YP_408544.1| 50S ribosomal protein L25 [Shigella boydii Sb227] gi|109893394|sp|Q31YZ2|RL25_SHIBS RecName: Full=50S ribosomal protein L25 gi|81246008|gb|ABB66716.1| 50S ribosomal subunit protein L25 [Shigella boydii Sb227] gi|332093581|gb|EGI98639.1| ribosomal L25p family protein [Shigella boydii 3594-74] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + + + + V +D Q P L H DF++ Sbjct: 62 AIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVR 93 >gi|290475893|ref|YP_003468786.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] gi|289175219|emb|CBJ82022.1| 50S ribosomal subunit protein L25 [Xenorhabdus bovienii SS-2004] Length = 93 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAIIYG +P I L + F L Sbjct: 2 LTINAEVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHESKPEFYEV-L 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L + + V + Q P L H DFL+ Sbjct: 61 NLVVDGKETTVKVQAVQRHPFKPKLTHIDFLR 92 >gi|167856183|ref|ZP_02478921.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] gi|167852705|gb|EDS23981.1| 50S ribosomal protein L25 [Haemophilus parasuis 29755] Length = 95 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 46/94 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K A +R GKG++R LR NGQ+PAIIYG ++ I L ++ F + Sbjct: 2 SFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQVHDAFYNEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LT+ + + V + Q P L+H DF ++ Sbjct: 62 LTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI 95 >gi|325261090|ref|ZP_08127828.1| ribosomal protein L25, Ctc-form [Clostridium sp. D5] gi|324032544|gb|EGB93821.1| ribosomal protein L25, Ctc-form [Clostridium sp. D5] Length = 197 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 12/190 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYG-NMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A R+ K A+ LR+ G +++G M D + K+ + N Sbjct: 2 TTLKAEKRNPEIK--AKRLRREGFTTGVLFGTGMKDTVALQYQEKEALSFIK-ANREGAQ 58 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 +TL++ + + I K+ + + + DF + G ++ V +R +NE+ G Sbjct: 59 VTLELDGKKISAITKNIDYNSMKKQINALDFQVLVAGEKISTAVQIRLMNESIVNGF--- 115 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIG-DSIHMEDIRLPE--KTSSMSQLNITI 181 +N EV N+ D I +D + + +++D++L E ++ + I Sbjct: 116 --VNQELTEVHYKADPANLLDPIEIDFEKISPEIRNYYVKDLKLDEKKDIELITPEDAQI 173 Query: 182 ATIVAPISGS 191 I GS Sbjct: 174 FHIGDVTGGS 183 >gi|260598644|ref|YP_003211215.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] gi|260217821|emb|CBA32311.1| 50S ribosomal protein L25 [Cronobacter turicensis z3032] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRHANKFPAIIYGGTEAPVAIELDHDKLMNMQAKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V V + Q P L H DF++ Sbjct: 62 TLAIDGKEVKVKVQAVQRHPYKPKLQHIDFVR 93 >gi|308176602|ref|YP_003916008.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] gi|307744065|emb|CBT75037.1| 50S ribosomal protein L25 [Arthrobacter arilaitensis Re117] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L AV+R GKG+AR R++GQIPA++YG S+P+ + L A++ + + + Sbjct: 1 MASVNLDAVVRSDFGKGAARQARRDGQIPAVVYGAGSEPQHVLLPARETTLAVRDRG--- 57 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 L L+I + V KD Q+ ++ + H D Sbjct: 58 VELVLNIEGKTVKTTIKDIQIHALNRTVDHMDL 90 >gi|206577853|ref|YP_002237395.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288934321|ref|YP_003438380.1| ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|290508524|ref|ZP_06547895.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] gi|226736332|sp|B5XP25|RL25_KLEP3 RecName: Full=50S ribosomal protein L25 gi|206566911|gb|ACI08687.1| ribosomal L25p family [Klebsiella pneumoniae 342] gi|288889050|gb|ADC57368.1| Ribosomal protein L25-like protein [Klebsiella variicola At-22] gi|289777918|gb|EFD85915.1| ribosomal L25p family protein [Klebsiella sp. 1_1_55] Length = 94 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F ++ Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKLWNMQDKAEFYGEVV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q L H DF++ Sbjct: 62 TLVIDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|212635580|ref|YP_002312105.1| 50S ribosomal protein L25 [Shewanella piezotolerans WP3] gi|226736367|sp|B8CPE2|RL25_SHEPW RecName: Full=50S ribosomal protein L25 gi|212557064|gb|ACJ29518.1| Ribosomal protein L25 [Shewanella piezotolerans WP3] Length = 95 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 49/92 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F TT Sbjct: 2 SYTIAAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQANEDFYTTD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTISLDGKDVAVRVQDMQRHAFKPLIEHIDFK 93 >gi|261346081|ref|ZP_05973725.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] gi|282565733|gb|EFB71268.1| ribosomal L25p family protein [Providencia rustigianii DSM 4541] Length = 93 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PA++YG + + L+ +I SK IL Sbjct: 2 LTINAIERKEQGKGASRRLRRANQLPAVVYGGNQEAISVTLNHDEII-NQESKAGFYDIL 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V + Q P + H DFL+ Sbjct: 61 NLVIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|260914051|ref|ZP_05920524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] gi|260631684|gb|EEX49862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pasteurella dagmatis ATCC 43325] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 51/93 (54%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +A +R GKG++R LR NGQIPAI+YG P I L+ D++ +F + ++ Sbjct: 2 FKFTAEVRQAQGKGASRRLRHNGQIPAIVYGGSEAPVSIILNHDDLNNAQVHDSFYSEVI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V + Q P L+H DF +V Sbjct: 62 TLVIEGKEVAVKAQAMQRHPFKPKLVHIDFKRV 94 >gi|68053216|sp|Q8EF74|RL25_SHEON RecName: Full=50S ribosomal protein L25 Length = 95 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG +P I KDI + +F T++ Sbjct: 2 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHAFKPIIEHVDF 92 >gi|227112089|ref|ZP_03825745.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227325904|ref|ZP_03829928.1| 50S ribosomal protein L25 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A R GKG++R LR G+ PAI+YG P I L + + + F + Sbjct: 2 ITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ILSIDGKEVKVKVQAVQRHVYKPKLTHIDFVRV 94 >gi|317048878|ref|YP_004116526.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] gi|316950495|gb|ADU69970.1| Ribosomal protein L25-like protein [Pantoea sp. At-9b] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A R + GKG++R LR + PAI+YG P I L I + F + +L Sbjct: 2 FTINAEARKEQGKGASRRLRHANKFPAIVYGGTEAPVSIELDHDSIMNMQAKEGFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V + Q P L H DF++ Sbjct: 62 TIVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|119774751|ref|YP_927491.1| 50S ribosomal protein L25 [Shewanella amazonensis SB2B] gi|166223717|sp|A1S615|RL25_SHEAM RecName: Full=50S ribosomal protein L25 gi|119767251|gb|ABL99821.1| LSU ribosomal protein L25P [Shewanella amazonensis SB2B] Length = 95 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 50/91 (54%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR+ G++PA+IYG +P I KDI + +F T++ Sbjct: 2 SYTIPAQTRTEIGKGSSRRLRREGKVPAVIYGVGKEPVSIVFDHKDIINIQANDDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 LT+ + + V+V + Q ++ H DF Sbjct: 62 LTIVLDGKEVNVRAQAMQRHVFKPMIDHVDF 92 >gi|329298034|ref|ZP_08255370.1| 50S ribosomal protein L25 [Plautia stali symbiont] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAVSIELDHDAVMNMQAKPEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|326792991|ref|YP_004310812.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] gi|326543755|gb|ADZ85614.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium lentocellum DSM 5427] Length = 181 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTILT 66 ++ R + K A+ LR+NG IP++IYG + + + K L K + + Sbjct: 4 ITVEKRSVLTK--AKQLRRNGIIPSVIYGGSLPESLLVQIDKNAAKKLLRCKR-EGSKME 60 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 +++ +L+ V KD + V++ ++H F + V + N +K G+ + Sbjct: 61 IELDSKLIPVQIKDIDSNIVNNEILHISFQALEADKRVNSKAQIILENTDKVVGVLE--- 117 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATI 184 + EV +++ D++ VDL L +G + +EDI + E + I I Sbjct: 118 --QLLFEVPYSALPSDMIDTVVVDLEGLAVGKVLTLEDIPVFKNENIDLQVSADSMILKI 175 Query: 185 V 185 Sbjct: 176 T 176 >gi|238755440|ref|ZP_04616781.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] gi|238706377|gb|EEP98753.1| 50S ribosomal protein L25 [Yersinia ruckeri ATCC 29473] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R+ GKG++R LR + PAI+YG IAL F + Sbjct: 2 ITINAEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNMELKPGFYNEPV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V + Q L H DF++V Sbjct: 62 ALVIDGKEVKVQVQAVQRHAFKPKLTHIDFVRV 94 >gi|197284710|ref|YP_002150582.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] gi|226736351|sp|B4ET93|RL25_PROMH RecName: Full=50S ribosomal protein L25 gi|194682197|emb|CAR41879.1| 50S ribosomal protein L25 [Proteus mirabilis HI4320] Length = 94 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG +P I L ++ + + F + Sbjct: 2 LTINATVRKEQGKGASRRLRVANRFPAIVYGGNEEPIAIDLDHNEVINQEHKSEFYADFV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V K Q + H DFL+ Sbjct: 62 NLVIDGKATKVKVKAVQRHEYKPKITHIDFLR 93 >gi|294140651|ref|YP_003556629.1| 50S ribosomal protein L25 [Shewanella violacea DSS12] gi|293327120|dbj|BAJ01851.1| ribosomal protein L25 [Shewanella violacea DSS12] Length = 95 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 48/92 (52%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I + KDI +K+F T Sbjct: 2 SYTIAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKESISIKFNQKDIINIQENKDFFTGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ I + + V + Q ++ H DF Sbjct: 62 LTIAIDGKEIKVRVQAMQRHAFKALIEHVDFT 93 >gi|312967485|ref|ZP_07781700.1| ribosomal L25p family protein [Escherichia coli 2362-75] gi|312287682|gb|EFR15587.1| ribosomal L25p family protein [Escherichia coli 2362-75] Length = 94 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 46/92 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P + L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSKVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|167624264|ref|YP_001674558.1| 50S ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] gi|189042371|sp|B0TIW4|RL25_SHEHH RecName: Full=50S ribosomal protein L25 gi|167354286|gb|ABZ76899.1| ribosomal protein L25 [Shewanella halifaxensis HAW-EB4] Length = 95 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 49/92 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHANKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTIALEGKDVKVRVQDMQRHAFKPMIEHVDFK 93 >gi|113970172|ref|YP_733965.1| 50S ribosomal protein L25 [Shewanella sp. MR-4] gi|114047638|ref|YP_738188.1| 50S ribosomal protein L25 [Shewanella sp. MR-7] gi|117920337|ref|YP_869529.1| 50S ribosomal protein L25 [Shewanella sp. ANA-3] gi|123130433|sp|Q0HJ59|RL25_SHESM RecName: Full=50S ribosomal protein L25 gi|123326513|sp|Q0HUS4|RL25_SHESR RecName: Full=50S ribosomal protein L25 gi|166223722|sp|A0KWF4|RL25_SHESA RecName: Full=50S ribosomal protein L25 gi|113884856|gb|ABI38908.1| LSU ribosomal protein L25P [Shewanella sp. MR-4] gi|113889080|gb|ABI43131.1| LSU ribosomal protein L25P [Shewanella sp. MR-7] gi|117612669|gb|ABK48123.1| LSU ribosomal protein L25P [Shewanella sp. ANA-3] Length = 95 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T++ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINIQTNEDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q ++ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHAFKPMIEHVDF 92 >gi|127512758|ref|YP_001093955.1| ribosomal protein L25 [Shewanella loihica PV-4] gi|166223720|sp|A3QDZ8|RL25_SHELP RecName: Full=50S ribosomal protein L25 gi|126638053|gb|ABO23696.1| LSU ribosomal protein L25P [Shewanella loihica PV-4] Length = 95 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 45/92 (48%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A R ++GKGS+R LR G++PA+IYG + I + I + +F + Sbjct: 2 SYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 +T+ + + V V + Q ++ H DF Sbjct: 62 ITIVLDGKEVKVRVQAMQRHAFKPMIEHVDFK 93 >gi|110642396|ref|YP_670126.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|161486176|ref|NP_754608.2| 50S ribosomal protein L25 [Escherichia coli CFT073] gi|162138406|ref|YP_541461.2| 50S ribosomal protein L25 [Escherichia coli UTI89] gi|170680132|ref|YP_001744381.1| 50S ribosomal protein L25 [Escherichia coli SMS-3-5] gi|191169977|ref|ZP_03031531.1| ribosomal L25p family [Escherichia coli F11] gi|215487407|ref|YP_002329838.1| 50S ribosomal protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218559106|ref|YP_002392019.1| 50S ribosomal protein L25 [Escherichia coli S88] gi|218690334|ref|YP_002398546.1| 50S ribosomal protein L25 [Escherichia coli ED1a] gi|218700657|ref|YP_002408286.1| 50S ribosomal protein L25 [Escherichia coli IAI39] gi|218705717|ref|YP_002413236.1| 50S ribosomal protein L25 [Escherichia coli UMN026] gi|227887242|ref|ZP_04005047.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|237704658|ref|ZP_04535139.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|293405653|ref|ZP_06649645.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|293410549|ref|ZP_06654125.1| ribosomal L25p family protein [Escherichia coli B354] gi|298381335|ref|ZP_06990934.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300897754|ref|ZP_07116147.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300935113|ref|ZP_07150144.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|300981433|ref|ZP_07175514.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300982905|ref|ZP_07176369.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|301021041|ref|ZP_07185084.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|301048925|ref|ZP_07195918.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|306814700|ref|ZP_07448862.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|331647841|ref|ZP_08348933.1| ribosomal L25p family protein [Escherichia coli M605] gi|331658266|ref|ZP_08359228.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331663690|ref|ZP_08364600.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331673707|ref|ZP_08374470.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331683865|ref|ZP_08384461.1| ribosomal L25p family protein [Escherichia coli H299] gi|68053217|sp|Q8FFS1|RL25_ECOL6 RecName: Full=50S ribosomal protein L25 gi|123343824|sp|Q0TFQ4|RL25_ECOL5 RecName: Full=50S ribosomal protein L25 gi|226736312|sp|B7MFA0|RL25_ECO45 RecName: Full=50S ribosomal protein L25 gi|226736314|sp|B7NN00|RL25_ECO7I RecName: Full=50S ribosomal protein L25 gi|226736317|sp|B7N5E9|RL25_ECOLU RecName: Full=50S ribosomal protein L25 gi|226736319|sp|B1LKT4|RL25_ECOSM RecName: Full=50S ribosomal protein L25 gi|254801045|sp|B7UFK2|RL25_ECO27 RecName: Full=50S ribosomal protein L25 gi|254801047|sp|B7MXK1|RL25_ECO81 RecName: Full=50S ribosomal protein L25 gi|110343988|gb|ABG70225.1| 50S ribosomal protein L25 [Escherichia coli 536] gi|170517850|gb|ACB16028.1| ribosomal L25p family [Escherichia coli SMS-3-5] gi|190909493|gb|EDV69078.1| ribosomal L25p family [Escherichia coli F11] gi|215265479|emb|CAS09880.1| 50S ribosomal subunit protein L25 [Escherichia coli O127:H6 str. E2348/69] gi|218365875|emb|CAR03616.1| 50S ribosomal subunit protein L25 [Escherichia coli S88] gi|218370643|emb|CAR18452.1| 50S ribosomal subunit protein L25 [Escherichia coli IAI39] gi|218427898|emb|CAR08817.2| 50S ribosomal subunit protein L25 [Escherichia coli ED1a] gi|218432814|emb|CAR13708.1| 50S ribosomal subunit protein L25 [Escherichia coli UMN026] gi|222033946|emb|CAP76687.1| 50S ribosomal protein L25 [Escherichia coli LF82] gi|226901024|gb|EEH87283.1| 50S ribosomal protein L25 [Escherichia sp. 3_2_53FAA] gi|227835592|gb|EEJ46058.1| 50S ribosomal protein L25 [Escherichia coli 83972] gi|281179277|dbj|BAI55607.1| 50S ribosomal protein L25 [Escherichia coli SE15] gi|284922169|emb|CBG35251.1| 50S ribosomal protein L25 [Escherichia coli 042] gi|291427861|gb|EFF00888.1| 50S ribosomal protein L25 [Escherichia coli FVEC1412] gi|291471017|gb|EFF13501.1| ribosomal L25p family protein [Escherichia coli B354] gi|294490536|gb|ADE89292.1| ribosomal L25p family [Escherichia coli IHE3034] gi|298278777|gb|EFI20291.1| 50S ribosomal protein L25 [Escherichia coli FVEC1302] gi|300299301|gb|EFJ55686.1| ribosomal L25p family protein [Escherichia coli MS 185-1] gi|300307506|gb|EFJ62026.1| ribosomal L25p family protein [Escherichia coli MS 200-1] gi|300358469|gb|EFJ74339.1| ribosomal L25p family protein [Escherichia coli MS 198-1] gi|300398293|gb|EFJ81831.1| ribosomal L25p family protein [Escherichia coli MS 69-1] gi|300408705|gb|EFJ92243.1| ribosomal L25p family protein [Escherichia coli MS 45-1] gi|300459694|gb|EFK23187.1| ribosomal L25p family protein [Escherichia coli MS 21-1] gi|305852094|gb|EFM52546.1| 50S ribosomal protein L25 [Escherichia coli NC101] gi|307626274|gb|ADN70578.1| 50S ribosomal protein L25 [Escherichia coli UM146] gi|312946805|gb|ADR27632.1| 50S ribosomal protein L25 [Escherichia coli O83:H1 str. NRG 857C] gi|315285739|gb|EFU45179.1| ribosomal L25p family protein [Escherichia coli MS 110-3] gi|315294445|gb|EFU53793.1| ribosomal L25p family protein [Escherichia coli MS 153-1] gi|315297947|gb|EFU57217.1| ribosomal L25p family protein [Escherichia coli MS 16-3] gi|320196059|gb|EFW70683.1| LSU ribosomal protein L25p [Escherichia coli WV_060327] gi|323188088|gb|EFZ73383.1| ribosomal L25p family protein [Escherichia coli RN587/1] gi|323951981|gb|EGB47855.1| ribosomal L25p family protein [Escherichia coli H252] gi|323955955|gb|EGB51708.1| ribosomal L25p family protein [Escherichia coli H263] gi|324006504|gb|EGB75723.1| ribosomal L25p family protein [Escherichia coli MS 57-2] gi|324013927|gb|EGB83146.1| ribosomal L25p family protein [Escherichia coli MS 60-1] gi|330912018|gb|EGH40528.1| LSU ribosomal protein L25p [Escherichia coli AA86] gi|331043565|gb|EGI15703.1| ribosomal L25p family protein [Escherichia coli M605] gi|331056514|gb|EGI28523.1| ribosomal L25p family protein [Escherichia coli TA206] gi|331059489|gb|EGI31466.1| ribosomal L25p family protein [Escherichia coli TA143] gi|331068980|gb|EGI40372.1| ribosomal L25p family protein [Escherichia coli TA280] gi|331078817|gb|EGI50019.1| ribosomal L25p family protein [Escherichia coli H299] Length = 94 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 46/92 (50%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P + L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAVELDHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|307128535|ref|YP_003880565.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] gi|306482997|gb|ADM89867.1| 50S ribosomal protein L25 [Candidatus Sulcia muelleri CARI] Length = 190 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 5/182 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ K LR G IP IIY + + K + + Sbjct: 1 MNCINIQGKKIKEIKKKYNSELRNYGYIPCIIYSKNK-NIKFYVLLSILKKIILTYKVYK 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK 122 IL + + + + K+ Q P++D +IH DF ++ + + + + I+ S G+ Sbjct: 60 VILEMK-NENKIEALLKEIQFHPINDEIIHVDFFELKKDK--YIIISIPIISVGHSLGVS 116 Query: 123 QGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIA 182 +GG+ + +++ + +++ D I +++N+L IGDS+++++I P+ + N IA Sbjct: 117 KGGEYKLFLNKIKIKIITDDLLDHINLNINNLDIGDSLYIKNIYNPK-YIILHNSNEVIA 175 Query: 183 TI 184 +I Sbjct: 176 SI 177 >gi|156933239|ref|YP_001437155.1| 50S ribosomal protein L25 [Cronobacter sakazakii ATCC BAA-894] gi|166223679|sp|A7MLN0|RL25_ENTS8 RecName: Full=50S ribosomal protein L25 gi|156531493|gb|ABU76319.1| hypothetical protein ESA_01051 [Cronobacter sakazakii ATCC BAA-894] Length = 94 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAI+YG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRHANKFPAIVYGGTEAPVAIELDHDKVMNMQAKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V V + Q P L H DF++ Sbjct: 62 TLAIDGKEVKVKVQAVQRHPYKPKLHHIDFVR 93 >gi|120598921|ref|YP_963495.1| 50S ribosomal protein L25 [Shewanella sp. W3-18-1] gi|146292993|ref|YP_001183417.1| 50S ribosomal protein L25 [Shewanella putrefaciens CN-32] gi|166223721|sp|A4Y6N5|RL25_SHEPC RecName: Full=50S ribosomal protein L25 gi|166223723|sp|A1RJU6|RL25_SHESW RecName: Full=50S ribosomal protein L25 gi|120559014|gb|ABM24941.1| LSU ribosomal protein L25P [Shewanella sp. W3-18-1] gi|145564683|gb|ABP75618.1| LSU ribosomal protein L25P [Shewanella putrefaciens CN-32] gi|319426477|gb|ADV54551.1| Ribosomal protein L25-like protein [Shewanella putrefaciens 200] Length = 95 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 49/91 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A R ++GKGS+R LR G++PA+IYG +P I KDI +++F T++ Sbjct: 2 SYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGQGKEPVSIVFEHKDIINIQANEDFYTSV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 +T+ + + V V + Q I+ H DF Sbjct: 62 VTIVLDGKEVGVRAQAMQRHVFKPIIEHVDF 92 >gi|327484250|gb|AEA78657.1| LSU ribosomal protein L25p [Vibrio cholerae LMA3894-4] Length = 92 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F + Sbjct: 1 MKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 60 VLVIDGQEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|218549601|ref|YP_002383392.1| 50S ribosomal protein L25 [Escherichia fergusonii ATCC 35469] gi|226736321|sp|B7LJS7|RL25_ESCF3 RecName: Full=50S ribosomal protein L25 gi|218357142|emb|CAQ89776.1| 50S ribosomal subunit protein L25 [Escherichia fergusonii ATCC 35469] gi|323968115|gb|EGB63525.1| ribosomal L25p family protein [Escherichia coli M863] gi|323977616|gb|EGB72702.1| ribosomal L25p family protein [Escherichia coli TW10509] gi|324114398|gb|EGC08367.1| ribosomal L25p family protein [Escherichia fergusonii B253] gi|325497998|gb|EGC95857.1| 50S ribosomal protein L25 [Escherichia fergusonii ECD227] gi|327252434|gb|EGE64093.1| ribosomal L25p family protein [Escherichia coli STEC_7v] Length = 94 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 48/92 (52%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R++ GKG++R LR + PAIIYG P +AL + F + +L Sbjct: 2 FTINAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|91792860|ref|YP_562511.1| ribosomal protein L25 [Shewanella denitrificans OS217] gi|123166239|sp|Q12P38|RL25_SHEDO RecName: Full=50S ribosomal protein L25 gi|91714862|gb|ABE54788.1| LSU ribosomal protein L25P [Shewanella denitrificans OS217] Length = 95 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 50/94 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 + A +R ++GKGS+R LR ++PA+IYG +P I KDI + +F T+ Sbjct: 2 SYTIQAQIRTEIGKGSSRRLRHANKVPAVIYGPGKEPMVIVFDQKDIINIQANADFYTSD 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +TL + + V V K Q ++ HADF+ V Sbjct: 62 VTLVVDGKDVKVRAKAMQRHAFKPLIEHADFMFV 95 >gi|262040201|ref|ZP_06013453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330015786|ref|ZP_08308278.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] gi|259042438|gb|EEW43457.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328530487|gb|EGF57360.1| ribosomal L25p family protein [Klebsiella sp. MS 92-3] Length = 94 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKVWNMQDKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V + Q L H DF++ Sbjct: 62 TVVVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|271500913|ref|YP_003333938.1| 50S ribosomal protein L25-like protein [Dickeya dadantii Ech586] gi|270344468|gb|ACZ77233.1| Ribosomal protein L25-like protein [Dickeya dadantii Ech586] Length = 95 Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK-DISKRLYSKNFMTTI 64 ++A +R + GKG++R LR G+ PAI+YG P I L + + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDHDIVKNLEDRNSEGLYGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + + Q P L H DF++V Sbjct: 62 IVLVIDGKETKAKIQAVQRHPFKPKLTHIDFVRV 95 >gi|157371491|ref|YP_001479480.1| 50S ribosomal protein L25 [Serratia proteamaculans 568] gi|166987894|sp|A8GGW2|RL25_SERP5 RecName: Full=50S ribosomal protein L25 gi|157323255|gb|ABV42352.1| ribosomal protein L25 [Serratia proteamaculans 568] Length = 94 Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R GKG++R LR + PAI+YG P I L + F + + Sbjct: 2 FTINVEVRKDQGKGASRRLRIANKFPAIVYGGEEAPVSIELDHDSVKNMESKPEFYSEAV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q P L H DF +V Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLAHIDFRRV 94 >gi|15641645|ref|NP_231277.1| 50S ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591191|ref|ZP_01678494.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121728910|ref|ZP_01681917.1| ribosomal protein L25 [Vibrio cholerae V52] gi|147673862|ref|YP_001217190.1| 50S ribosomal protein L25 [Vibrio cholerae O395] gi|153216905|ref|ZP_01950669.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|153801556|ref|ZP_01956142.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|153819731|ref|ZP_01972398.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|153823940|ref|ZP_01976607.1| ribosomal protein L25 [Vibrio cholerae B33] gi|153826166|ref|ZP_01978833.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|227081792|ref|YP_002810343.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|229523735|ref|ZP_04413140.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254226742|ref|ZP_04920317.1| ribosomal protein L25 [Vibrio cholerae V51] gi|254285416|ref|ZP_04960381.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|254848760|ref|ZP_05238110.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255744931|ref|ZP_05418881.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258621917|ref|ZP_05716947.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|258624936|ref|ZP_05719863.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|261211762|ref|ZP_05926049.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|262161784|ref|ZP_06030802.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262165815|ref|ZP_06033552.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262169654|ref|ZP_06037345.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262171350|ref|ZP_06039028.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262190569|ref|ZP_06048810.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262404058|ref|ZP_06080613.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297579219|ref|ZP_06941147.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|298498277|ref|ZP_07008084.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] gi|68053239|sp|Q9KRK0|RL25_VIBCH RecName: Full=50S ribosomal protein L25 gi|172047678|sp|A5F7P6|RL25_VIBC3 RecName: Full=50S ribosomal protein L25 gi|254801066|sp|C3LMW6|RL25_VIBCM RecName: Full=50S ribosomal protein L25 gi|9656153|gb|AAF94791.1| ribosomal protein L25 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546946|gb|EAX57094.1| ribosomal protein L25 [Vibrio cholerae 2740-80] gi|121628796|gb|EAX61258.1| ribosomal protein L25 [Vibrio cholerae V52] gi|124114054|gb|EAY32874.1| ribosomal protein L25 [Vibrio cholerae 1587] gi|124122883|gb|EAY41626.1| ribosomal protein L25 [Vibrio cholerae MZO-3] gi|125620719|gb|EAZ49078.1| ribosomal protein L25 [Vibrio cholerae V51] gi|126509722|gb|EAZ72316.1| ribosomal protein L25 [Vibrio cholerae NCTC 8457] gi|126518534|gb|EAZ75757.1| ribosomal protein L25 [Vibrio cholerae B33] gi|146315745|gb|ABQ20284.1| ribosomal protein L25 [Vibrio cholerae O395] gi|149740107|gb|EDM54272.1| ribosomal protein L25 [Vibrio cholerae MZO-2] gi|150424688|gb|EDN16624.1| ribosomal protein L25 [Vibrio cholerae AM-19226] gi|227009680|gb|ACP05892.1| ribosomal protein L25 [Vibrio cholerae M66-2] gi|227013548|gb|ACP09758.1| ribosomal protein L25 [Vibrio cholerae O395] gi|229337316|gb|EEO02333.1| LSU ribosomal protein L25p [Vibrio cholerae bv. albensis VL426] gi|254844465|gb|EET22879.1| ribosomal protein L25 [Vibrio cholerae MO10] gi|255737402|gb|EET92797.1| LSU ribosomal protein L25p [Vibrio cholera CIRS 101] gi|258582792|gb|EEW07614.1| 50S ribosomal protein L25 [Vibrio mimicus VM603] gi|258585855|gb|EEW10574.1| 50S ribosomal protein L25 [Vibrio mimicus VM573] gi|260839112|gb|EEX65744.1| LSU ribosomal protein L25p [Vibrio sp. RC341] gi|261892426|gb|EEY38412.1| LSU ribosomal protein L25p [Vibrio mimicus MB-451] gi|262021888|gb|EEY40598.1| LSU ribosomal protein L25p [Vibrio cholerae RC27] gi|262025531|gb|EEY44199.1| LSU ribosomal protein L25p [Vibrio mimicus VM223] gi|262028516|gb|EEY47171.1| LSU ribosomal protein L25p [Vibrio cholerae INDRE 91/1] gi|262033556|gb|EEY52053.1| LSU ribosomal protein L25p [Vibrio cholerae CT 5369-93] gi|262349090|gb|EEY98228.1| LSU ribosomal protein L25p [Vibrio sp. RC586] gi|297536813|gb|EFH75646.1| ribosomal protein L25 [Vibrio cholerae RC385] gi|297542610|gb|EFH78660.1| LSU ribosomal protein L25p family protein [Vibrio cholerae MAK 757] Length = 92 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR G PAI+YG + P I+L+ D+ ++ F + Sbjct: 1 MKFEAVLRTDLGKGASRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 60 VLVIDGQEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|183599528|ref|ZP_02961021.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] gi|188021775|gb|EDU59815.1| hypothetical protein PROSTU_03007 [Providencia stuartii ATCC 25827] Length = 93 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ ++ + F L Sbjct: 2 LTINAIARKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEVINQEGKAEFYEV-L 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +L I + V + Q P + H DFL+V Sbjct: 61 SLVIDGKETKVKVQAIQRHPFKPKVTHIDFLRV 93 >gi|238757898|ref|ZP_04619080.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238789717|ref|ZP_04633500.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238794238|ref|ZP_04637852.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] gi|238703883|gb|EEP96418.1| 50S ribosomal protein L25 [Yersinia aldovae ATCC 35236] gi|238722270|gb|EEQ13927.1| 50S ribosomal protein L25 [Yersinia frederiksenii ATCC 33641] gi|238726420|gb|EEQ17960.1| 50S ribosomal protein L25 [Yersinia intermedia ATCC 29909] Length = 94 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|146312423|ref|YP_001177497.1| 50S ribosomal protein L25P [Enterobacter sp. 638] gi|166987893|sp|A4WCL6|RL25_ENT38 RecName: Full=50S ribosomal protein L25 gi|145319299|gb|ABP61446.1| LSU ribosomal protein L25P [Enterobacter sp. 638] Length = 94 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R GKG++R LR + PAIIYG + P I + + + + F T +L Sbjct: 2 FTINAEVRAVQGKGASRRLRAANKFPAIIYGGEAAPVAIEMDQDKVWNQQTKEGFYTEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ I + V + Q P L H DF++ Sbjct: 62 TIVIDGKEEKVKVQAVQRHPFKPKLSHVDFVR 93 >gi|22126797|ref|NP_670220.1| 50S ribosomal protein L25 [Yersinia pestis KIM 10] gi|45441151|ref|NP_992690.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51595640|ref|YP_069831.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108806978|ref|YP_650894.1| 50S ribosomal protein L25 [Yersinia pestis Antiqua] gi|108812873|ref|YP_648640.1| 50S ribosomal protein L25 [Yersinia pestis Nepal516] gi|145599702|ref|YP_001163778.1| 50S ribosomal protein L25 [Yersinia pestis Pestoides F] gi|149366752|ref|ZP_01888786.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|153949273|ref|YP_001401685.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162418620|ref|YP_001606000.1| 50S ribosomal protein L25 [Yersinia pestis Angola] gi|165924387|ref|ZP_02220219.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165936355|ref|ZP_02224924.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|166009819|ref|ZP_02230717.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211351|ref|ZP_02237386.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|167400243|ref|ZP_02305756.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419427|ref|ZP_02311180.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423846|ref|ZP_02315599.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025020|ref|YP_001721525.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186894710|ref|YP_001871822.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|218928418|ref|YP_002346293.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|229841213|ref|ZP_04461372.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843318|ref|ZP_04463464.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229894381|ref|ZP_04509564.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|229903301|ref|ZP_04518414.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|270487105|ref|ZP_06204179.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|68053091|sp|Q66CV3|RL25_YERPS RecName: Full=50S ribosomal protein L25 gi|68053227|sp|Q8ZGM4|RL25_YERPE RecName: Full=50S ribosomal protein L25 gi|123073260|sp|Q1CG40|RL25_YERPN RecName: Full=50S ribosomal protein L25 gi|123245899|sp|Q1C9C3|RL25_YERPA RecName: Full=50S ribosomal protein L25 gi|166223733|sp|A4TNE3|RL25_YERPP RecName: Full=50S ribosomal protein L25 gi|166987895|sp|A7FKA7|RL25_YERP3 RecName: Full=50S ribosomal protein L25 gi|226694606|sp|B2K9F2|RL25_YERPB RecName: Full=50S ribosomal protein L25 gi|226694608|sp|A9R3I4|RL25_YERPG RecName: Full=50S ribosomal protein L25 gi|226694609|sp|B1JS45|RL25_YERPY RecName: Full=50S ribosomal protein L25 gi|21959824|gb|AAM86471.1|AE013894_6 50S ribosomal subunit protein L25 [Yersinia pestis KIM 10] gi|45436011|gb|AAS61567.1| 50S ribosomal protein L25 [Yersinia pestis biovar Microtus str. 91001] gi|51588922|emb|CAH20539.1| 50S ribosomal protein L25 [Yersinia pseudotuberculosis IP 32953] gi|108776521|gb|ABG19040.1| LSU ribosomal protein L25P [Yersinia pestis Nepal516] gi|108778891|gb|ABG12949.1| LSU ribosomal protein L25P [Yersinia pestis Antiqua] gi|115347029|emb|CAL19921.1| 50S ribosomal protein L25 [Yersinia pestis CO92] gi|145211398|gb|ABP40805.1| LSU ribosomal protein L25P [Yersinia pestis Pestoides F] gi|149291126|gb|EDM41201.1| 50S ribosomal protein L25 [Yersinia pestis CA88-4125] gi|152960768|gb|ABS48229.1| ribosomal protein L25 [Yersinia pseudotuberculosis IP 31758] gi|162351435|gb|ABX85383.1| ribosomal protein L25 [Yersinia pestis Angola] gi|165915969|gb|EDR34577.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. IP275] gi|165923447|gb|EDR40579.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. F1991016] gi|165991215|gb|EDR43516.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207122|gb|EDR51602.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962168|gb|EDR58189.1| ribosomal protein L25 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050192|gb|EDR61600.1| ribosomal protein L25 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056695|gb|EDR66458.1| ribosomal protein L25 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751554|gb|ACA69072.1| ribosomal protein L25 [Yersinia pseudotuberculosis YPIII] gi|186697736|gb|ACC88365.1| ribosomal protein L25 [Yersinia pseudotuberculosis PB1/+] gi|229679071|gb|EEO75174.1| 50S ribosomal subunit protein L25 [Yersinia pestis Nepal516] gi|229689665|gb|EEO81726.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. India 195] gi|229697579|gb|EEO87626.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703779|gb|EEO90795.1| 50S ribosomal subunit protein L25 [Yersinia pestis Pestoides A] gi|270335609|gb|EFA46386.1| ribosomal L25p family protein [Yersinia pestis KIM D27] gi|320015891|gb|ADV99462.1| 50S ribosomal subunit protein L25 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 94 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIVYGGSEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|330446122|ref|ZP_08309774.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490313|dbj|GAA04271.1| 50S ribosomal subunit protein L25 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 92 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR G P I+YG + P I L D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLEGLFPGIVYGGEAAPVAITLKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|300724001|ref|YP_003713315.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] gi|297630532|emb|CBJ91197.1| 50S ribosomal subunit protein L25 [Xenorhabdus nematophila ATCC 19061] Length = 93 Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR+ + PAIIYG +P I L + F + Sbjct: 2 LTINATVRKEQGKGASRRLRRANKFPAIIYGGNQEPVSIELDHDAVINHENKPEFYEVM- 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DFL+ Sbjct: 61 TLVVDGKETKVKVQAVQRHPFKPKLTHIDFLR 92 >gi|188533402|ref|YP_001907199.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] gi|226736320|sp|B2VII8|RL25_ERWT9 RecName: Full=50S ribosomal protein L25 gi|188028444|emb|CAO96306.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] Length = 94 Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|238784262|ref|ZP_04628274.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] gi|238714829|gb|EEQ06829.1| 50S ribosomal protein L25 [Yersinia bercovieri ATCC 43970] Length = 94 Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTIKVEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNLELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|170767283|ref|ZP_02901736.1| ribosomal L25p family [Escherichia albertii TW07627] gi|170123617|gb|EDS92548.1| ribosomal L25p family [Escherichia albertii TW07627] Length = 94 Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 47/92 (51%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P +AL + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRTANKFPAIIYGGNEAPLAVALGHDKVMNMQVKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + + V +D Q P L+H DF++ Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVR 93 >gi|259907985|ref|YP_002648341.1| 50S ribosomal protein L25 [Erwinia pyrifoliae Ep1/96] gi|224963607|emb|CAX55100.1| 50S ribosomal subunit protein L25 [Erwinia pyrifoliae Ep1/96] gi|283477872|emb|CAY73788.1| 50S ribosomal protein L25 [Erwinia pyrifoliae DSM 12163] gi|310768106|gb|ADP13056.1| 50S ribosomal protein L25 [Erwinia sp. Ejp617] Length = 94 Score = 84.4 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVMNLQSKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|296103843|ref|YP_003613989.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058302|gb|ADF63040.1| 50S ribosomal protein L25 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVSIELDHDKVWNMQTKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ +G + V + Q L H DF++ Sbjct: 62 TIVVGGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|157961782|ref|YP_001501816.1| 50S ribosomal protein L25 [Shewanella pealeana ATCC 700345] gi|189042372|sp|A8H3Z4|RL25_SHEPA RecName: Full=50S ribosomal protein L25 gi|157846782|gb|ABV87281.1| ribosomal protein L25 [Shewanella pealeana ATCC 700345] Length = 95 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 49/92 (53%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 ++A +R ++GKGS+R LR ++PA+IYG + I KDI +++F T+ Sbjct: 2 SYTIAAQVRTEIGKGSSRRLRHAKKVPAVIYGPGKEAISIVFDHKDIINIQENQDFYTSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LT+ + + V V +D Q ++ H DF Sbjct: 62 LTIALEGKDVKVRVQDMQRHAFKPMIEHVDFK 93 >gi|283785997|ref|YP_003365862.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] gi|282949451|emb|CBG89064.1| 50S ribosomal protein L25 [Citrobacter rodentium ICC168] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPIAIELDHDQVMNMQVKPEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|237732238|ref|ZP_04562719.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] gi|226907777|gb|EEH93695.1| 50S ribosomal protein L25 [Citrobacter sp. 30_2] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V V + Q P L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHPFKPKLSHIDFVR 93 >gi|307130683|ref|YP_003882699.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] gi|306528212|gb|ADM98142.1| 50S ribosomal subunit protein L25 [Dickeya dadantii 3937] Length = 95 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK-DISKRLYSKNFMTTI 64 ++A +R + GKG++R LR G+ PAI+YG P I L + + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDHDIVKNLEDRNSEGLYGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L + + V + Q P L H DF++V Sbjct: 62 IALVVDGKETKVKIQAVQRHPFKPKLTHIDFVRV 95 >gi|268591197|ref|ZP_06125418.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] gi|291313428|gb|EFE53881.1| ribosomal L25p family protein [Providencia rettgeri DSM 1131] Length = 93 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR++ Q+PAI+YG + + L+ +I + F L Sbjct: 2 LTINAIERKEQGKGASRRLRRDNQLPAIVYGGNQEAISVTLNHDEIINQESKAEFYEV-L 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V + Q P + H DFL+ Sbjct: 61 NLVIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|152971157|ref|YP_001336266.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895745|ref|YP_002920481.1| 50S ribosomal protein L25 [Klebsiella pneumoniae NTUH-K2044] gi|166223691|sp|A6TBR5|RL25_KLEP7 RecName: Full=50S ribosomal protein L25 gi|150956006|gb|ABR78036.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548063|dbj|BAH64414.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG + P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAAAPVAIELDHDKVWNMQDKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V + Q L H DF++ Sbjct: 62 TVVVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|16761165|ref|NP_456782.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765553|ref|NP_461168.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141140|ref|NP_804482.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412863|ref|YP_149938.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180811|ref|YP_217228.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613068|ref|YP_001587033.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551198|ref|ZP_02344953.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992549|ref|ZP_02573646.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229596|ref|ZP_02654654.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236413|ref|ZP_02661471.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242330|ref|ZP_02667262.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261757|ref|ZP_02683730.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818045|ref|ZP_02830045.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442256|ref|YP_002041499.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451948|ref|YP_002046279.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471162|ref|ZP_03077146.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735960|ref|YP_002115314.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251433|ref|YP_002147197.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262341|ref|ZP_03162415.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361794|ref|YP_002141430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245069|ref|YP_002216308.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387863|ref|ZP_03214475.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929202|ref|ZP_03220345.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857658|ref|YP_002244309.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213416568|ref|ZP_03349712.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424220|ref|ZP_03357079.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581647|ref|ZP_03363473.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612604|ref|ZP_03370430.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646824|ref|ZP_03376877.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213851900|ref|ZP_03381432.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583278|ref|YP_002637076.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913794|ref|ZP_04657631.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824601|ref|ZP_06544144.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|68053011|sp|Q57MB4|RL25_SALCH RecName: Full=50S ribosomal protein L25 gi|68053042|sp|Q5PE20|RL25_SALPA RecName: Full=50S ribosomal protein L25 gi|68053181|sp|Q7CQ71|RL25_SALTY RecName: Full=50S ribosomal protein L25 gi|68053225|sp|Q8XFE7|RL25_SALTI RecName: Full=50S ribosomal protein L25 gi|189042369|sp|A9N6F6|RL25_SALPB RecName: Full=50S ribosomal protein L25 gi|226736359|sp|B5EYS6|RL25_SALA4 RecName: Full=50S ribosomal protein L25 gi|226736360|sp|B5FNN0|RL25_SALDC RecName: Full=50S ribosomal protein L25 gi|226736361|sp|B5R194|RL25_SALEP RecName: Full=50S ribosomal protein L25 gi|226736363|sp|B4TAP8|RL25_SALHS RecName: Full=50S ribosomal protein L25 gi|226736364|sp|B4SYR0|RL25_SALNS RecName: Full=50S ribosomal protein L25 gi|226736365|sp|B5BE12|RL25_SALPK RecName: Full=50S ribosomal protein L25 gi|226736366|sp|B4TPC7|RL25_SALSV RecName: Full=50S ribosomal protein L25 gi|254801060|sp|C0Q0R6|RL25_SALPC RecName: Full=50S ribosomal protein L25 gi|25295452|pir||AI0785 50s ribosomal protein L25 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420762|gb|AAL21127.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503463|emb|CAD02607.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi] gi|29136766|gb|AAO68331.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127120|gb|AAV76626.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128444|gb|AAX66147.1| 50S ribosomal subunit protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362432|gb|ABX66200.1| hypothetical protein SPAB_00776 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400919|gb|ACF61141.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410252|gb|ACF70471.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457526|gb|EDX46365.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711462|gb|ACF90683.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197093270|emb|CAR58716.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215136|gb|ACH52533.1| ribosomal L25p family [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240596|gb|EDY23216.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290557|gb|EDY29912.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939585|gb|ACH76918.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604961|gb|EDZ03506.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321746|gb|EDZ06945.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323963|gb|EDZ11802.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329203|gb|EDZ15967.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335818|gb|EDZ22582.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338300|gb|EDZ25064.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345061|gb|EDZ31825.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349319|gb|EDZ35950.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709461|emb|CAR33802.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467805|gb|ACN45635.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247436|emb|CBG25261.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994306|gb|ACY89191.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158785|emb|CBW18297.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913214|dbj|BAJ37188.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086668|emb|CBY96439.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224880|gb|EFX49943.1| LSU ribosomal protein L25p [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615251|gb|EFY12173.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617841|gb|EFY14737.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624564|gb|EFY21395.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626985|gb|EFY23781.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634170|gb|EFY30906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635637|gb|EFY32347.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640227|gb|EFY36891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646350|gb|EFY42862.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649317|gb|EFY45753.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656437|gb|EFY52726.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660680|gb|EFY56915.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665697|gb|EFY61881.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667223|gb|EFY63390.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671228|gb|EFY67356.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675131|gb|EFY71208.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680739|gb|EFY76774.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686914|gb|EFY82891.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715288|gb|EFZ06859.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130554|gb|ADX17984.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192679|gb|EFZ77906.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198889|gb|EFZ83988.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205100|gb|EFZ90078.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208143|gb|EFZ93087.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211196|gb|EFZ96042.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215831|gb|EGA00574.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221862|gb|EGA06262.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223802|gb|EGA08105.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231277|gb|EGA15392.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233710|gb|EGA17802.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237782|gb|EGA21842.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245763|gb|EGA29757.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246497|gb|EGA30476.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252604|gb|EGA36443.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255328|gb|EGA39101.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259563|gb|EGA43198.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266060|gb|EGA49553.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272754|gb|EGA56158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624059|gb|EGE30404.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989158|gb|AEF08141.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|292488791|ref|YP_003531678.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|292899942|ref|YP_003539311.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291199790|emb|CBJ46911.1| 50s ribosomal protein L25 [Erwinia amylovora ATCC 49946] gi|291554225|emb|CBA21495.1| 50S ribosomal protein L25 [Erwinia amylovora CFBP1430] gi|312172944|emb|CBX81199.1| 50S ribosomal protein L25 [Erwinia amylovora ATCC BAA-2158] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINVETRKEQGKGASRRLRTANKFPAIIYGGNEAAVAIELDHDSVLNLQSKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|168466077|ref|ZP_02699947.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631317|gb|EDX49877.1| ribosomal L25p family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 94 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPVAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|300717594|ref|YP_003742397.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] gi|299063430|emb|CAX60550.1| 50S ribosomal subunit protein L25 [Erwinia billingiae Eb661] Length = 94 Score = 84.0 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ R + GKG++R LR + PAIIYG P I L + F T +L Sbjct: 2 FTINVEERKEQGKGASRRLRLANKFPAIIYGGEVAPIAIELDHDSVMNIQAKPGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVNGKEEKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|209695530|ref|YP_002263459.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] gi|226736274|sp|B6EI32|RL25_ALISL RecName: Full=50S ribosomal protein L25 gi|208009482|emb|CAQ79769.1| 50S ribosomal protein L25 [Aliivibrio salmonicida LFI1238] Length = 92 Score = 84.0 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR G+ PAI+YG P I L D+ ++ F + Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIELIHFDVINQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 ELVIDGATVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|212712413|ref|ZP_03320541.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] gi|212685159|gb|EEB44687.1| hypothetical protein PROVALCAL_03502 [Providencia alcalifaciens DSM 30120] Length = 93 Score = 84.0 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A+ R + GKG++R LR+ Q+PAI+YG + + L+ +I + F L Sbjct: 2 LTINAIERKEQGKGASRRLRRANQLPAIVYGGNQEAISVTLNHDEIINQESKAEFYEV-L 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q P + H DFL+ Sbjct: 61 TLVIDGKETKVKVQAVQRHPFKPKVTHIDFLR 92 >gi|161502616|ref|YP_001569728.1| 50S ribosomal protein L25 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189042368|sp|A9MK27|RL25_SALAR RecName: Full=50S ribosomal protein L25 gi|160863963|gb|ABX20586.1| hypothetical protein SARI_00663 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 94 Score = 84.0 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAFKPKLTHIDFIR 93 >gi|238761997|ref|ZP_04622970.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] gi|238699725|gb|EEP92469.1| 50S ribosomal protein L25 [Yersinia kristensenii ATCC 33638] Length = 94 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG I L F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEPAIAITLDHDTTKNIELKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|295098121|emb|CBK87211.1| LSU ribosomal protein L25P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 94 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +R+ GKG++R LR + PAI+YG + P I L + F + +L Sbjct: 2 FTIEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVAIELDHDKVWNMQNKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V + Q L H DF++ Sbjct: 62 TIVVDGKEEKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|149189635|ref|ZP_01867917.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] gi|148836447|gb|EDL53402.1| 50S ribosomal protein L25 [Vibrio shilonii AK1] Length = 92 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PAI+YG + P IAL+ D+ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIALNHDDVINQMDKPAFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|315274580|ref|ZP_07869458.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] gi|313615790|gb|EFR89040.1| 50S ribosomal protein L25 [Listeria marthii FSL S4-120] Length = 124 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 ++ + + ++V+ +YQ+DP+ D+L+H D L V V V V + +PG+K GG Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLV--GDAPGVKAGG 119 Query: 126 KLNVV 130 L + Sbjct: 120 VLQQI 124 >gi|238753023|ref|ZP_04614480.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] gi|238708744|gb|EEQ01005.1| 50S ribosomal protein L25 [Yersinia rohdei ATCC 43380] Length = 94 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAIIYG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIIYGGSEAAISIALDHDTTKNLEIKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL + + V + Q L H DF++V Sbjct: 62 TLVVDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|205353357|ref|YP_002227158.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226736362|sp|B5RC63|RL25_SALG2 RecName: Full=50S ribosomal protein L25 gi|205273138|emb|CAR38095.1| 50s ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628446|gb|EGE34789.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 94 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRTANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V V + Q L H DF++ Sbjct: 62 TLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVR 93 >gi|291618131|ref|YP_003520873.1| RplY [Pantoea ananatis LMG 20103] gi|291153161|gb|ADD77745.1| RplY [Pantoea ananatis LMG 20103] gi|327394530|dbj|BAK11952.1| 50S ribosomal protein L25 RplY [Pantoea ananatis AJ13355] Length = 94 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 FTINAVERKEQGKGASRRLRAANRFPAIIYGGSEAAVAIDLDHDQVMNLQTKPGFYEEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLVVDGKETKVKVQAVQRHPFKPKLHHIDFVR 93 >gi|157144862|ref|YP_001452180.1| 50S ribosomal protein L25 [Citrobacter koseri ATCC BAA-895] gi|166223675|sp|A8AE31|RL25_CITK8 RecName: Full=50S ribosomal protein L25 gi|157082067|gb|ABV11745.1| hypothetical protein CKO_00591 [Citrobacter koseri ATCC BAA-895] Length = 94 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|238796850|ref|ZP_04640355.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] gi|238719338|gb|EEQ11149.1| 50S ribosomal protein L25 [Yersinia mollaretii ATCC 43969] Length = 94 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R+ GKG++R LR + PAI+YG IAL F ++L Sbjct: 2 TTINVEVRNDQGKGASRRLRAANKFPAIVYGGTEAAISIALDHDTTKNLEIKPGFYDSVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V + Q L H DF++V Sbjct: 62 TLVIDGKETKVKVQAVQRHAFKPKLTHIDFVRV 94 >gi|148979342|ref|ZP_01815474.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] gi|145961882|gb|EDK27174.1| 50S ribosomal protein L25 [Vibrionales bacterium SWAT-3] Length = 92 Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L+ ++ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVSIELNHDEVINQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLLIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|261253125|ref|ZP_05945698.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] gi|260936516|gb|EEX92505.1| LSU ribosomal protein L25p [Vibrio orientalis CIP 102891] Length = 92 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG + P I L+ ++ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAPVAIVLTHDEVMNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|304397508|ref|ZP_07379386.1| Ribosomal protein L25-like protein [Pantoea sp. aB] gi|304355126|gb|EFM19495.1| Ribosomal protein L25-like protein [Pantoea sp. aB] Length = 94 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 LTINAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQSKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLSVDGKETKVKVQAVQRHPFKPKLFHIDFVR 93 >gi|237808487|ref|YP_002892927.1| 50S ribosomal protein L25 [Tolumonas auensis DSM 9187] gi|259646697|sp|C4LFH4|RL25_TOLAT RecName: Full=50S ribosomal protein L25 gi|237500748|gb|ACQ93341.1| ribosomal protein L25 [Tolumonas auensis DSM 9187] Length = 95 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 +R +GKG++R LR+ Q+PAI+YG + + L + F + + Sbjct: 2 SFTFQTEVRADLGKGASRRLRRAEQVPAILYGAGQEAVSLVLDHNKVITAQQEAAFYSEV 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 LTL + + V V Q PV ++H DF++ Sbjct: 62 LTLVVDGKEVKVKVAAVQRHPVKPKVVHLDFIR 94 >gi|405949|gb|AAA16413.1| rplY [Escherichia coli] Length = 96 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDIL 90 T+ + + + V +D Q P Sbjct: 62 TIVVDGKEIKVKAQDVQRHPYKPKC 86 >gi|15605861|ref|NP_213238.1| general stress protein Ctc [Aquifex aeolicus VF5] gi|68051943|sp|O66678|CTC_AQUAE RecName: Full=General stress protein ctc gi|2983034|gb|AAC06644.1| general stress protein Ctc [Aquifex aeolicus VF5] Length = 151 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 2/128 (1%) Query: 57 SKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINEN 116 + ++ ++ E + KD Q + + IH D +S + V VP+ F+ Sbjct: 1 MPHGEAFLIEAELDGETRVCLLKDIQFGWLGNNPIHIDLYDLSNVEEIEVEVPIEFVGTP 60 Query: 117 KSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQ 176 G++ GG V H +++ P IP+ I VD++ L +G+++H+ DI PE + Sbjct: 61 A--GVEAGGTFEPVMHTLTIKAPPAKIPEKIVVDVSGLGLGEALHVRDITPPEGCMILDN 118 Query: 177 LNITIATI 184 T+A + Sbjct: 119 PEETVAVV 126 >gi|256372367|ref|YP_003110191.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] gi|256008951|gb|ACU54518.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidimicrobium ferrooxidans DSM 10331] Length = 172 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 28 GQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPV 86 G++P I+YG ++P + L L + +L ++I E+ V + PV Sbjct: 24 GKVPGIVYGAGLTEPVAVTLDRHGFLTALGQHAVVGQLLDIEIDGEVRTVKLQAVVRHPV 83 Query: 87 SDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDS 146 L H DFL V TV V VP+ G + +V V++ ++P S Sbjct: 84 RRELSHLDFLAVGASETVEVQVPLE-----------AGEGVRLVVGLVAVSGTPTSVPSS 132 Query: 147 ITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATI 184 I V + L G S+ + LP S + +AT+ Sbjct: 133 IHVGADLLADG-SVTAGALPLPAGVSLVEAPETVVATV 169 >gi|307069530|ref|YP_003878007.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] gi|306482790|gb|ADM89661.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola CARI] Length = 214 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 3/158 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K+ + +R+K+G R +IP +IYGN + ++ K KN + Sbjct: 1 MKIHSFIRNKLGTYYNNKNRYKNRIPGVIYGNNKKNINLIFKKSELFKIFKKKNINILKI 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIK-QG 124 + + Q ++H D L++S V + +P++F N S +K + Sbjct: 61 IFKKKIKKFLIKNI--QFHAYKKEILHIDLLRISNKKKVNILIPLKFKNIKNSYAVKSEN 118 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHM 162 +N + ++ + C IP I ++L +LK+ + I + Sbjct: 119 AFINFIYKKIPIFCLPKYIPKYILLNLKNLKVNNPILV 156 >gi|270262760|ref|ZP_06191031.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] gi|270043444|gb|EFA16537.1| 50S ribosomal protein L25 [Serratia odorifera 4Rx13] Length = 94 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++ +R GKG++R LR + PAI+YG I L + F + + Sbjct: 2 FTINVQVRKDQGKGASRRLRAANKFPAIVYGGEEAAVSIELDHDSVKNMEAKPEFYSEAV 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q P L H DF++ Sbjct: 62 TLVIDGKETKVKVQAVQRHPFKPKLTHIDFVR 93 >gi|123441746|ref|YP_001005730.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162314|ref|YP_004298891.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223732|sp|A1JLN0|RL25_YERE8 RecName: Full=50S ribosomal protein L25 gi|122088707|emb|CAL11512.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606385|emb|CBY27883.1| LSU ribosomal protein L25p [Yersinia enterocolitica subsp. palearctica Y11] gi|325666544|gb|ADZ43188.1| 50S ribosomal protein L25 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860252|emb|CBX70569.1| 50S ribosomal protein L25 [Yersinia enterocolitica W22703] Length = 95 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM-TTI 64 + A +R+ GKG++R LR + PAIIYG I L F T Sbjct: 2 ITIKAEVRNDQGKGASRRLRAANKFPAIIYGGSEAAIAIELDHDTTKNLELKPGFYDNTG 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I + V + Q L H DF+++ Sbjct: 62 LTLVINGKETKVKVQAVQRHAFKPKLTHIDFVRI 95 >gi|308187560|ref|YP_003931691.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] gi|308058070|gb|ADO10242.1| 50S ribosomal protein L25 [Pantoea vagans C9-1] Length = 94 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV R + GKG++R LR + PAIIYG I L + F +L Sbjct: 2 LTINAVERKEQGKGASRRLRTANRFPAIIYGGSEAAVAIDLDHDSVMNLQAKPGFYDEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL + + V + Q P L H DF++ Sbjct: 62 TLSVDGKETKVKVQAVQRHPFKPKLFHIDFVR 93 >gi|59711469|ref|YP_204245.1| 50S ribosomal protein L25 [Vibrio fischeri ES114] gi|68053021|sp|Q5E6I9|RL25_VIBF1 RecName: Full=50S ribosomal protein L25 gi|59479570|gb|AAW85357.1| 50S ribosomal subunit protein L25 [Vibrio fischeri ES114] Length = 92 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR G+ PAI+YG P IAL + ++ F + Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGKFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 ELVIDGAAVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|283832377|ref|ZP_06352118.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] gi|291072027|gb|EFE10136.1| ribosomal L25p family protein [Citrobacter youngae ATCC 29220] Length = 94 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGAEAPIAIELDHDAVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 T+ + + V V + Q L H DF++ Sbjct: 62 TIVVDGKEVKVKAQAVQRHAFKPKLTHIDFVR 93 >gi|160937289|ref|ZP_02084651.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] gi|158439853|gb|EDP17602.1| hypothetical protein CLOBOL_02179 [Clostridium bolteae ATCC BAA-613] Length = 188 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 11/182 (6%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS-DPKPIALSAKDISKRLYSKNFMTTIL 65 + R+ K A+ LR+ G IPA ++G DP I L D + L+ K + L Sbjct: 3 TICVQRREGAIK--AKKLRRLGFIPANVFGKSLPDPISIQLKESDARRLLHQKR-EGSKL 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGG 125 LD+ + V K+ ++D + + H F ++ V + + +N++K PG Sbjct: 60 MLDLEGTGLPVQIKEKEIDTIKGQIQHISFQALTADEKVNSVIHILLVNDDKIPGQLDKM 119 Query: 126 KLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNITIAT 183 E+ ++ D+ITVDL+ + +G + ++DI + +K + Sbjct: 120 -----LMEIPYASLPGDMIDTITVDLDGITVGTILTVKDIPELMSDKIELKVDSEEIVLR 174 Query: 184 IV 185 + Sbjct: 175 VS 176 >gi|27366131|ref|NP_761659.1| 50S ribosomal protein L25 [Vibrio vulnificus CMCP6] gi|37679604|ref|NP_934213.1| 50S ribosomal protein L25 [Vibrio vulnificus YJ016] gi|320156643|ref|YP_004189022.1| 50S ribosomal protein L25p [Vibrio vulnificus MO6-24/O] gi|68053194|sp|Q7MLK7|RL25_VIBVY RecName: Full=50S ribosomal protein L25 gi|68053215|sp|Q8D8W6|RL25_VIBVU RecName: Full=50S ribosomal protein L25 gi|27362331|gb|AAO11186.1| LSU ribosomal protein L25p [Vibrio vulnificus CMCP6] gi|37198348|dbj|BAC94184.1| ribosomal protein L25 [Vibrio vulnificus YJ016] gi|319931955|gb|ADV86819.1| LSU ribosomal protein L25p [Vibrio vulnificus MO6-24/O] Length = 92 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PA++YG + P +AL+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRLAGQFPAVVYGGEAAPVAVALNHDDIVNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL IG E V V P+D Q + H DF+++ Sbjct: 60 TLVIGGEEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|251790040|ref|YP_003004761.1| 50S ribosomal protein L25 [Dickeya zeae Ech1591] gi|247538661|gb|ACT07282.1| ribosomal protein L25 [Dickeya zeae Ech1591] Length = 95 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK-DISKRLYSKNFMTTI 64 ++A +R + GKG++R LR G+ PAI+YG P I L + + + Sbjct: 2 ITINAEVRKEQGKGASRRLRTTGKFPAIVYGGSEAPVSIELDHDIVKNLEDRNSEGLYGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V + Q L H DF++V Sbjct: 62 IVLVIDGKETKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|300122709|emb|CBK23275.2| Ribosomal protein L25 [Blastocystis hominis] Length = 253 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 8/168 (4%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG----NMSDPKPIALSAKDISKRLYSKN--FM 61 + A R+K GK +R LRKNG IP ++YG + IA+ A ++ + N Sbjct: 44 IPAFRREKDGKNYSRFLRKNGAIPGVLYGSDGNGHDERILIAVPASEVDRFTKRLNLALE 103 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+ LD+ E + P+ P++D + +FL++++ + V +P+R+ N+ K+ I Sbjct: 104 CTLFELDLEGERILCFPRQLSCHPLTDKPENLNFLRMNKKTGTMVQIPIRYYNQTKNREI 163 Query: 122 KQGGKLNVV--CHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167 K GG L+ +V + +P I +L L + +ED+ Sbjct: 164 KLGGFLSTATRYLDVRVKGDVTYVPPFINCNLEKLTHKRAFGVEDLDF 211 >gi|260768249|ref|ZP_05877183.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|260616279|gb|EEX41464.1| LSU ribosomal protein L25p [Vibrio furnissii CIP 102972] gi|315179957|gb|ADT86871.1| 50S ribosomal protein L25 [Vibrio furnissii NCTC 11218] Length = 92 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G PAI+YG + P I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRNTGNFPAIVYGGEAAPVSITLNHDDIVNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|94676575|ref|YP_588833.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219725|gb|ABF13884.1| 50S ribosomal protein L25 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 94 Score = 82.1 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R K G ++ LR G++PAI+YG + P I L + + +L Sbjct: 2 LTLQAENRKKTGTRASNRLRIAGKLPAILYGGNTQPIAIELDSTKYMHIKNQISLDNDLL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I ++ V Q P + H DF++V Sbjct: 62 ALVINGKIFTVKVWAIQHHPFKPQITHIDFIRV 94 >gi|197335111|ref|YP_002155624.1| ribosomal L25p family protein [Vibrio fischeri MJ11] gi|226694584|sp|B5FCG1|RL25_VIBFM RecName: Full=50S ribosomal protein L25 gi|197316601|gb|ACH66048.1| ribosomal L25p family protein [Vibrio fischeri MJ11] Length = 92 Score = 82.1 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R + GKG++R LR GQ PAI+YG P IAL + ++ F + Sbjct: 1 MKFEAVVRTEQGKGASRRLRHAGQFPAIVYGGTEAPVSIALDHDAVINQMDKPAFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I +V V P+D Q + H DF+++ Sbjct: 60 ELVIDGAVVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|293395239|ref|ZP_06639524.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] gi|291422196|gb|EFE95440.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Serratia odorifera DSM 4582] Length = 94 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 38/92 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG I L + F + Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGKDAAIAIELDHDSVKNMEAKPEFYAEAI 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L + + V + Q L H DF++ Sbjct: 62 VLVVDGKETKVKVQAVQRHAFKPKLTHIDFVR 93 >gi|242239779|ref|YP_002987960.1| ribosomal protein L25 [Dickeya dadantii Ech703] gi|242131836|gb|ACS86138.1| ribosomal protein L25 [Dickeya dadantii Ech703] Length = 95 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAK-DISKRLYSKNFMTTI 64 ++A +R++ GK ++R LR G+ PAI+YG P I L + + + Sbjct: 2 ITINAEVRNEQGKSASRRLRNTGKFPAIVYGGNEAPVSIVLDHDIVKNLEDRNSAELFGE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V + Q L H DF++V Sbjct: 62 IELVIDGKATKVKIQAVQRHVFKPKLTHIDFVRV 95 >gi|269102758|ref|ZP_06155455.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] gi|268162656|gb|EEZ41152.1| LSU ribosomal protein L25p [Photobacterium damselae subsp. damselae CIP 102761] Length = 92 Score = 81.7 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F + Sbjct: 1 MKFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEAPVAIVLDHDSVINQMDKPAFYEV-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V P+D Q P + H DF +V Sbjct: 60 TLVIDGKEVQVKPQDIQRHPYKPKVNHMDFNRV 92 >gi|163801136|ref|ZP_02195036.1| 50S ribosomal protein L25 [Vibrio sp. AND4] gi|159175485|gb|EDP60282.1| 50S ribosomal protein L25 [Vibrio sp. AND4] Length = 92 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +VGKG++R LR G+ PA++YG ++ I L DI ++ F + Sbjct: 1 MKFEAVVRTEVGKGASRRLRHAGKFPAVVYGGEAEAVAIVLDHNDIVNQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|260772946|ref|ZP_05881862.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] gi|260612085|gb|EEX37288.1| LSU ribosomal protein L25p [Vibrio metschnikovii CIP 69.14] Length = 92 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R ++GKG++R LR G PAI+YG + P IAL D+ ++ F + Sbjct: 1 MKFNAVVRTELGKGASRRLRHTGLFPAIVYGGEAAPVSIALKHDDVINQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGTEVKVKPQDVQRHVFKPKVEHMDFIRI 92 >gi|312885156|ref|ZP_07744836.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367169|gb|EFP94741.1| 50S ribosomal protein L25 [Vibrio caribbenthicus ATCC BAA-2122] Length = 92 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDIVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + + V P+D Q + H DF+++ Sbjct: 60 VLVIDGKELKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|86148084|ref|ZP_01066385.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218709848|ref|YP_002417469.1| 50S ribosomal protein L25 [Vibrio splendidus LGP32] gi|254801067|sp|B7VPU4|RL25_VIBSL RecName: Full=50S ribosomal protein L25 gi|85834144|gb|EAQ52301.1| 50S ribosomal protein L25 [Vibrio sp. MED222] gi|218322867|emb|CAV19044.1| ribosomal protein L25 [Vibrio splendidus LGP32] Length = 92 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L D+ ++ F T + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVIYGGEAAAVAIELVHADVINQMDKPEFYET-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|254507008|ref|ZP_05119146.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] gi|219550003|gb|EED26990.1| ribosomal L25p family protein [Vibrio parahaemolyticus 16] Length = 92 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|227494886|ref|ZP_03925202.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831338|gb|EEH63721.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 97 Score = 80.9 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +L A +R GKG AR R G++PA++YG P + L ++ + N L Sbjct: 5 IRLEATVRTDFGKGFARRSRMAGKVPAVVYGPNLAPVHVELPGHEVFMIVK--NNRQATL 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ + + KD Q PV ++H D + V Sbjct: 63 SIAFDGKEQLAVIKDVQRHPVRRDILHVDLVAV 95 >gi|84394035|ref|ZP_00992773.1| ribosomal protein L25 [Vibrio splendidus 12B01] gi|84375372|gb|EAP92281.1| ribosomal protein L25 [Vibrio splendidus 12B01] Length = 92 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA+IYG + I L ++ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHTGKFPAVIYGGEAAAVAIELVHAEVINQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q + H DF+++ Sbjct: 60 TLLIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|85059550|ref|YP_455252.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] gi|109893397|sp|Q2NSM8|RL25_SODGM RecName: Full=50S ribosomal protein L25 gi|84780070|dbj|BAE74847.1| 50S ribosomal protein L25 [Sodalis glossinidius str. 'morsitans'] Length = 94 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 42/92 (45%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++AV+R GKG++R LR + PAI+YG P I L + + F T +L Sbjct: 2 LTINAVIRKDQGKGASRRLRLANKFPAIVYGGTKAPVAIELDHDIVLNTQTKEGFYTDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 L I + V + Q L H DF++ Sbjct: 62 ALVIDGKESKVKVQAVQRHSFKPKLTHIDFVR 93 >gi|262394558|ref|YP_003286412.1| 50S ribosomal protein L25p [Vibrio sp. Ex25] gi|262338152|gb|ACY51947.1| LSU ribosomal protein L25p [Vibrio sp. Ex25] Length = 92 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F L Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEG-L 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 60 VLVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|323494532|ref|ZP_08099637.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323496670|ref|ZP_08101721.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] gi|323311259|gb|EGA64418.1| 50S ribosomal protein L25 [Vibrio brasiliensis LMG 20546] gi|323318252|gb|EGA71212.1| 50S ribosomal protein L25 [Vibrio sinaloensis DSM 21326] Length = 92 Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ D+ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVSIVLNHDDVVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|260778863|ref|ZP_05887755.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] gi|260605027|gb|EEX31322.1| LSU ribosomal protein L25p [Vibrio coralliilyticus ATCC BAA-450] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR GQ PAI+YG + P I L+ D+ ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGQFPAIVYGGEAAPVSIVLNHDDVVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|262275816|ref|ZP_06053625.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] gi|262219624|gb|EEY70940.1| LSU ribosomal protein L25p [Grimontia hollisae CIP 101886] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R K GKG++R LR + PA++YG + P IAL + ++ F + Sbjct: 1 MKFEAVVRTKQGKGASRRLRHADKFPAVVYGGEAAPVAIALDHSKVITQMDKPEFYEA-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I V V P+D Q P ++H DF+++ Sbjct: 60 TLVIDGAEVKVKPQDIQRHPFKPKVMHMDFIRI 92 >gi|89073632|ref|ZP_01160154.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] gi|89050659|gb|EAR56145.1| putative ribosomal protein L25 [Photobacterium sp. SKA34] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR Q P IIYG + P IAL D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLAEQFPGIIYGGEAAPVAIALKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|90578772|ref|ZP_01234582.1| 50S ribosomal protein L25 [Vibrio angustum S14] gi|90439605|gb|EAS64786.1| 50S ribosomal protein L25 [Vibrio angustum S14] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR Q P I+YG + P IAL D+ ++ F Sbjct: 1 MKFNAVVRTDLGKGASRRLRLQEQFPGIVYGGEAAPVAIALKHSDVINQMDKPEFYEG-F 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q P + H DF ++ Sbjct: 60 VLVIDGQEVKVKPQDIQRHPFKPKVEHMDFKRI 92 >gi|156974943|ref|YP_001445850.1| 50S ribosomal protein L25 [Vibrio harveyi ATCC BAA-1116] gi|166223731|sp|A7MZG9|RL25_VIBHB RecName: Full=50S ribosomal protein L25 gi|156526537|gb|ABU71623.1| hypothetical protein VIBHAR_02662 [Vibrio harveyi ATCC BAA-1116] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|28897984|ref|NP_797589.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91229004|ref|ZP_01262870.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|153840101|ref|ZP_01992768.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|260364231|ref|ZP_05776934.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] gi|260877139|ref|ZP_05889494.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|260895799|ref|ZP_05904295.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|260902064|ref|ZP_05910459.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|269968142|ref|ZP_06182177.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|68053212|sp|Q87QD9|RL25_VIBPA RecName: Full=50S ribosomal protein L25 gi|28806198|dbj|BAC59473.1| ribosomal protein L25 [Vibrio parahaemolyticus RIMD 2210633] gi|91187468|gb|EAS73806.1| 50S ribosomal protein L25 [Vibrio alginolyticus 12G01] gi|149746297|gb|EDM57367.1| ribosomal L25p family [Vibrio parahaemolyticus AQ3810] gi|269827273|gb|EEZ81572.1| 50S ribosomal protein L25 [Vibrio alginolyticus 40B] gi|308088343|gb|EFO38038.1| ribosomal L25p family protein [Vibrio parahaemolyticus Peru-466] gi|308093641|gb|EFO43336.1| ribosomal L25p family protein [Vibrio parahaemolyticus AN-5034] gi|308109083|gb|EFO46623.1| ribosomal L25p family protein [Vibrio parahaemolyticus AQ4037] gi|308111903|gb|EFO49443.1| ribosomal L25p family protein [Vibrio parahaemolyticus K5030] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIVLNHDDIVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 60 VLVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|68053088|sp|Q659V3|RL25_PASPI RecName: Full=50S ribosomal protein L25 gi|52137558|emb|CAH33824.1| L25 protein [Photobacterium damselae subsp. piscicida] Length = 92 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R +GKG++R LR Q PAI+YG P I L + ++ F + Sbjct: 1 MKFEAVVRTDLGKGASRRLRHANQFPAIVYGGEEVPVAIVLDHDSVINQMDKPAFYEV-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 TL I + V V P+D Q P + H DF +V Sbjct: 60 TLVIDGKEVQVKPQDIQRHPYKPKVNHMDFKRV 92 >gi|328473060|gb|EGF43908.1| 50S ribosomal protein L25 [Vibrio parahaemolyticus 10329] Length = 92 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEEAAVAIILNHDDIVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF+++ Sbjct: 60 VLVIDGKEVKVKPQDVQRHAFKPKVEHMDFIRI 92 >gi|311278832|ref|YP_003941063.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] gi|308748027|gb|ADO47779.1| Ribosomal protein L25-like protein [Enterobacter cloacae SCF1] Length = 94 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 +R + GKG++R LR ++PAIIYG + P + L + F + +L Sbjct: 2 FTFDVAVRKEQGKGASRRLRAANKVPAIIYGGAAAPVSVELDHDKVFNAQAKTEFYSDVL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 TL I + V + Q + H DF++ Sbjct: 62 TLVIDGKEEKVKVQAVQRHAYKPKVTHIDFVR 93 >gi|322832031|ref|YP_004212058.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] gi|321167232|gb|ADW72931.1| Ribosomal protein L25-like protein [Rahnella sp. Y9602] Length = 96 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 6 CKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++ +R D+ GKG++R LR + PAI+YG + P I L + F + Sbjct: 2 ITINVEVRPQDEQGKGASRRLRTANKFPAIVYGGSAAPVSIKLDHDSVKNLEVKAEFYSE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 +TL I + V + Q P L H DF++V Sbjct: 62 AITLVIDGKETKVKVQAVQRHPFKPKLAHIDFVRV 96 >gi|269963438|ref|ZP_06177765.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] gi|269831838|gb|EEZ85970.1| 50S ribosomal protein L25 [Vibrio harveyi 1DA3] Length = 92 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K AV+R ++GKG++R LR G+ PA++YG + I L+ DI ++ F + Sbjct: 1 MKFEAVVRTELGKGASRRLRHAGKFPAVVYGGEAAAVAIVLNHDDIVNQMDKPEFYEG-I 59 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I V V P+D Q + H DF+++ Sbjct: 60 VLVIDGAEVKVKPQDVQRHAYKPKVEHMDFIRI 92 >gi|330887870|gb|EGH20531.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas syringae pv. mori str. 301020] Length = 71 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61 E L+A R +GKG++R LR+ +PA++YG P+ I++ AK+++K L + Sbjct: 1 MNEFTLNAEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAY 60 Query: 62 TTILTLDIGKE 72 + I+ L++G + Sbjct: 61 SHIIELNVGGQ 71 >gi|304413081|ref|ZP_07394554.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] gi|304283924|gb|EFL92317.1| 50S ribosomal subunit protein L25 (general stress protein Ctc) [Candidatus Regiella insecticola LSR1] Length = 99 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 6 CKLSAVMRD--KVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++A +RD KG++R LR + PA++YG I L I+ F Sbjct: 2 ITINATVRDVKDQVKGASRRLRAKNKFPAVVYGGTEQAISIVLEQDVITNLESKPGFYGE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 LTL I + +V + Q P H DF++V Sbjct: 62 PLTLMIDDKANNVKVQAVQRHPFKPKFTHIDFMRV 96 >gi|87306413|ref|ZP_01088560.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] gi|87290592|gb|EAQ82479.1| probable 50S ribosomal protein L25 [Blastopirellula marina DSM 3645] Length = 90 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 E L+ R+ GK + R LR G+IPA++YGN + + + A + + + K Sbjct: 1 MAEV-LNVKKRELTGKLNNRRLRNAGKIPAVLYGNGQESVSLEVCADEFAAIVRHK---V 56 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQ 97 + L G +V+ +D Q D + H DF + Sbjct: 57 KNIEL-AGDVTGNVVMRDIQWDTFGVDVQHIDFYR 90 >gi|46913156|emb|CAG19945.1| putative ribosomal protein L25 [Photobacterium profundum SS9] Length = 109 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I Sbjct: 17 NMKFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGI 76 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + L I + V V P+D Q + H DF +V Sbjct: 77 I-LVIDGQEVAVKPQDIQRHVFKPKVEHMDFKRV 109 >gi|90410519|ref|ZP_01218535.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] gi|90328760|gb|EAS45044.1| 50S ribosomal protein L25 [Photobacterium profundum 3TCK] Length = 92 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K A++R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 1 MKFDAIVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF +V Sbjct: 61 -LVIDGQEVAVKPQDIQRHAFKPKVEHMDFKRV 92 >gi|161936313|ref|YP_129747.2| 50S ribosomal protein L25 [Photobacterium profundum SS9] gi|68053167|sp|Q6LRY1|RL25_PHOPR RecName: Full=50S ribosomal protein L25 Length = 92 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 K +AV+R +GKG++R LR + PAIIYG + P I L D+ ++ F I+ Sbjct: 1 MKFNAVVRTDLGKGASRRLRLTEKFPAIIYGGEAAPVAIELLHSDVINQMDKPEFYEGII 60 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L I + V V P+D Q + H DF +V Sbjct: 61 -LVIDGQEVAVKPQDIQRHVFKPKVEHMDFKRV 92 >gi|15616758|ref|NP_239970.1| 50S ribosomal protein L25 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681513|ref|YP_002467898.1| 50S ribosomal protein L25 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682069|ref|YP_002468453.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471194|ref|ZP_05635193.1| 50S ribosomal protein L25 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387018|sp|P57238|RL25_BUCAI RecName: Full=50S ribosomal protein L25 gi|254801038|sp|B8D8T9|RL25_BUCA5 RecName: Full=50S ribosomal protein L25 gi|254801039|sp|B8D743|RL25_BUCAT RecName: Full=50S ribosomal protein L25 gi|25295455|pir||H84945 50S ribosomal protein L25 [imported] - Buchnera sp. (strain APS) gi|10038821|dbj|BAB12856.1| 50S ribosomal protein L25 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621802|gb|ACL29958.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624356|gb|ACL30511.1| 50S ribosomal protein L25 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085881|gb|ADP65963.1| 50S ribosomal protein L25 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086452|gb|ADP66533.1| 50S ribosomal protein L25 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087034|gb|ADP67114.1| 50S ribosomal protein L25 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087598|gb|ADP67677.1| 50S ribosomal protein L25 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 95 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 35/93 (37%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L A R + G G +R LR + + PA++YG + L F L Sbjct: 2 LTLQAETRKEKGTGFSRRLRIHNKFPAVLYGVKKTEILLILDHNTTFNLQKKIEFYKENL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 L + + V + Q L+H DFL V Sbjct: 62 LLCVQDKKYKVKVQAIQRHSFKSKLLHIDFLYV 94 >gi|238897689|ref|YP_002923368.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465446|gb|ACQ67220.1| 50S ribosomal subunit protein L25 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 99 Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Query: 6 CKLSAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTT 63 ++A +R ++ G ++R RK G PA +YG P I L + + F Sbjct: 2 IVINAKLRQKEEKGTAASRRFRKAGLFPATVYGGSLPPVSIVLDHDVVKNLEANPAFYNE 61 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 ILTL++G+E V + Q P L H DF++ + Sbjct: 62 ILTLEVGEEKTKVKIQAIQRHPFKPKLTHMDFIRAN 97 >gi|289804879|ref|ZP_06535508.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 87 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 40/86 (46%) Query: 12 MRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK 71 +R + GKG++R LR + PAIIYG P I L + F + +LTL + Sbjct: 1 VRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDG 60 Query: 72 ELVHVIPKDYQLDPVSDILIHADFLQ 97 + V V + Q L H DF++ Sbjct: 61 KEVKVKAQAVQRHAYKPKLTHIDFVR 86 >gi|125973813|ref|YP_001037723.1| 50S ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|256004546|ref|ZP_05429525.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281417970|ref|ZP_06248990.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|125714038|gb|ABN52530.1| LSU ribosomal protein L25P [Clostridium thermocellum ATCC 27405] gi|255991551|gb|EEU01654.1| ribosomal protein L25 [Clostridium thermocellum DSM 2360] gi|281409372|gb|EFB39630.1| Ribosomal protein L25-like protein [Clostridium thermocellum JW20] gi|316939993|gb|ADU74027.1| Ribosomal protein L25-like protein [Clostridium thermocellum DSM 1313] Length = 105 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 +E +L+ R +G ++R +++ G+IP ++Y PI+L + + + KN Sbjct: 1 MEEFELNIENRTALGTSASRKVKREGKIPGVLY-QGDKSIPISLIEDE-IRPIVDKNGSD 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 ++ +++ + + + Q PVSD ++H D + + G + V Sbjct: 59 VLVNVNLNGKRIKAKIHEVQRKPVSDEILHVDLMPLDGGKEDSFGVH 105 >gi|163849365|ref|YP_001637409.1| 50S ribosomal protein L25 [Chloroflexus aurantiacus J-10-fl] gi|222527362|ref|YP_002571833.1| 50S ribosomal protein L25 [Chloroflexus sp. Y-400-fl] gi|163670654|gb|ABY37020.1| ribosomal protein L25 [Chloroflexus aurantiacus J-10-fl] gi|222451241|gb|ACM55507.1| ribosomal protein L25 [Chloroflexus sp. Y-400-fl] Length = 94 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L+A R GK + LR+ G +PA YG + I ++ +D + + Sbjct: 1 MANVTLTAQRRHIFGKK-VKTLRREGILPANFYGKGVETTAIQINERDFEQIFRTVP-KG 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 LDI V+ Q PV+ +H DF Sbjct: 59 ESFNLDIEGTTYPVVIYVVQRHPVTRKFLHIDFK 92 >gi|224533422|ref|ZP_03674015.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] gi|224513384|gb|EEF83742.1| ribosomal protein L25, Ctc-form [Borrelia burgdorferi CA-11.2a] Length = 136 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 2/124 (1%) Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 T+L LD GK V KD + S ++ H DF +V + +VP++ I S G+ Sbjct: 14 NTVLILDDGKLERCVFVKDVAENIASKLIYHIDFYEVDRNVELEKYVPIKLI--GASIGV 71 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITI 181 K+GG L V+ +V + ++P+ I +DL + GDS+ ++D+ LP Sbjct: 72 KEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLE 131 Query: 182 ATIV 185 I+ Sbjct: 132 VVII 135 >gi|219847611|ref|YP_002462044.1| 50S ribosomal protein L25 [Chloroflexus aggregans DSM 9485] gi|219541870|gb|ACL23608.1| ribosomal protein L25 [Chloroflexus aggregans DSM 9485] Length = 94 Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 2/94 (2%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 L+A R GK + LR+ G +PA YG + I ++ +D + + Sbjct: 1 MANVTLTAQRRHIFGKK-VKTLRREGILPANFYGKGVETTAIQVNERDFEQIFRTVP-KG 58 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 TL+I V+ Q PV+ +H DF Sbjct: 59 ESFTLNIEGTTYPVVIYVVQRHPVTRKFLHVDFK 92 >gi|325262957|ref|ZP_08129693.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] gi|324032051|gb|EGB93330.1| hypothetical protein HMPREF0240_01947 [Clostridium sp. D5] Length = 192 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 12/186 (6%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKD-ISKRLYSKNFM 61 + ++ RD K A+ LR++G +P ++G P I+L + I++RL Sbjct: 1 MNDI-ITVNKRDFTVK--AKQLRRSGIVPGSVFGGSL-PDSISLQMDEGIARRLIRYKRE 56 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + L LD+ ++L+ V K+ ++ +++ ++H F + V + + N K Sbjct: 57 GSKLKLDLDRQLIPVQIKEKTINTLNNEILHISFQALKADLKVNSVIHIILKNTEKITES 116 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIR--LPEKTSSMSQLNI 179 +G E+ ++ D+IT+D++ + +G I + DI + EK + Sbjct: 117 LEGM-----LLEIPYAAFPEDMIDTITIDVDGMAVGTVITVADIPELMSEKIDLQVEKEE 171 Query: 180 TIATIV 185 + I Sbjct: 172 IVLRIS 177 >gi|303241756|ref|ZP_07328253.1| Ribosomal protein L25-like protein [Acetivibrio cellulolyticus CD2] gi|302590757|gb|EFL60508.1| Ribosomal protein L25-like protein [Acetivibrio cellulolyticus CD2] Length = 102 Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMT 62 + ++ R ++G AR L++ G +P ++Y + PI + +I L K Sbjct: 1 MEAFDINVENRTELGSSVARKLKREGMVPGVLY-QGGESLPIEMREDEIRHVLAGKMDYD 59 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 IL + K+ Q + +S + H D + + Sbjct: 60 LILNISFNNRQFKAKVKEVQREAISGEIRHVDLMPLETN 98 >gi|296085755|emb|CBI29566.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 74.0 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+P D + +++ F EGS + V VP+ F E+ PG+K+GG LN + + Sbjct: 55 VLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLK 114 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI-TIATIVAPI 188 LCPA +IP I VD+++L IGD I M D+ + +S+ + IVA Sbjct: 115 FLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAK 168 >gi|255017155|ref|ZP_05289281.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria monocytogenes FSL F2-515] Length = 93 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L R+ LR G++P IIYG S+ P+++ + ++ K + N + Sbjct: 3 TTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVR-DNGRNAVF 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADF 95 ++ + + ++V+ +YQ+DP+ D+L+H D Sbjct: 62 SVTVDGKKLNVLLHEYQVDPLKDVLVHVDL 91 >gi|21672421|ref|NP_660488.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009079|sp|Q8KA03|RL25_BUCAP RecName: Full=50S ribosomal protein L25 gi|21623031|gb|AAM67699.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 96 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 39/94 (41%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 + A +RDK GK +R LR + P ++YG + P I + + ++F L Sbjct: 2 FIVKAEIRDKKGKSFSRKLRIEDKFPGVLYGFNNTPISITMDHNLVFNLQKKEDFYKETL 61 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 L I ++ V Q ++H DF+ Sbjct: 62 CLLIKEKKYTVKVHAIQRHAFKMKILHIDFIYAK 95 >gi|323144481|ref|ZP_08079083.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] gi|322415759|gb|EFY06491.1| ribosomal L25p family protein [Succinatimonas hippei YIT 12066] Length = 95 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 48/93 (51%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 L AV+R +G+G++R LR+ +IPAII + I L K + F + + Sbjct: 3 ITLDAVVRTDLGRGASRRLRREARIPAIIVAPGQETVSITLDEKKLIVAALKDEFYSETV 62 Query: 66 TLDIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 T+++ + V P Q PV+ +IH DF++V Sbjct: 63 TINLDGSAIAVKPVAMQRHPVTSRIIHVDFMRV 95 >gi|260060920|ref|YP_003194000.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] gi|88785052|gb|EAR16221.1| putative 50S ribosomal protein L25 [Robiginitalea biformata HTCC2501] Length = 170 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 70/130 (53%), Gaps = 4/130 (3%) Query: 55 LYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 +Y+ N T ++ + G+ + + +D Q PV+D ++H DF Q+ VT+ +PVR + Sbjct: 1 MYTPNAHTVVIEFEDGR-KIDAVLQDIQFHPVTDNILHVDFYQLFPDKEVTMKIPVRLL- 58 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 SPG++ GG+L ++ + N+PD VD+++LKIGD + ++ ++ E + + Sbjct: 59 -GNSPGVRNGGRLLFRKRKLVIRALPKNLPDFFNVDISNLKIGDLVAVDTLKSDE-FTIL 116 Query: 175 SQLNITIATI 184 + + Sbjct: 117 HPDTTVVVQV 126 >gi|219112565|ref|XP_002178034.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410919|gb|EEC50848.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 278 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 22/180 (12%) Query: 14 DKVGKGSARLLRKNGQIPAIIYGNM-------SDPKPIALSAKDISKRLYSKNFMTTILT 66 + G + R LR IP I G+ P+ + + Sbjct: 63 TEEGSRACRRLRWKNMIPGTIRGSDPNLGIFSKQPESEIYVKTPWAVLQRELDRYHRDFE 122 Query: 67 L------------DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 D V+P++ Q PV+ + A+F + G + PV FIN Sbjct: 123 SRVYDITVLDGPEDTEGTTHRVLPQNLQRHPVNSTIYCANFCRYHPGRPIKF--PVSFIN 180 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS 173 +SP +K+ G + + + +IP+S+ ++ + L+ D I + I LP+ Sbjct: 181 TEESPALKRDGFIIPIQRSIECFVEDGVDIPESLDMECSGLQFKDVIRTDRIILPDGVRF 240 >gi|53792263|dbj|BAD52896.1| hypothetical protein [Oryza sativa Japonica Group] Length = 381 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K +++ +K I K + Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSF 125 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 126 FLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPL 185 Query: 111 RFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDL 151 FI E+ SPG+++G N + V LCPA+ +P I VDL Sbjct: 186 MFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDL 226 >gi|167011125|ref|ZP_02276056.1| ribosomal L25p family protein [Francisella tularensis subsp. holarctica FSC200] Length = 57 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%) Query: 3 QKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY 56 L A R+ +G G++R LR+ G+IPA+IYG + + L + Sbjct: 1 MANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTE 54 >gi|229823129|ref|ZP_04449198.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] gi|229787295|gb|EEP23409.1| hypothetical protein GCWU000282_00426 [Catonella morbi ATCC 51271] Length = 101 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI 64 L A +R+KVG GSA+ +R+ G +PA +YG S+ + ++ +++ L ++ ++ Sbjct: 9 TMSLKAELREKVGSGSAKKVREAGLVPATLYGKGSEAVSLTVNRRELDVVLKTQ-GLSQA 67 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 L+ + +V+ K +SD + DF Sbjct: 68 FELEFDGKKENVVVKAVNKAALSDEIYSVDFK 99 >gi|113476807|ref|YP_722868.1| 50S ribosomal protein L25 [Trichodesmium erythraeum IMS101] gi|110167855|gb|ABG52395.1| LSU ribosomal protein L25P [Trichodesmium erythraeum IMS101] Length = 102 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 5/98 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKRLYSKNFMTT 63 E + R K + LR+ G IPA++YG+ ++ + + K+ + L + + T Sbjct: 2 EVTVECQKRPLGSK--TKALRREGLIPAVLYGHQLTESVSLTIDIKEAQQLLKNASTNKT 59 Query: 64 ILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVS 99 ++ L + + + + ++ Q P + H F +S Sbjct: 60 VIDLKVPEISWNGKTLLREVQYHPYKSEIYHLSFFSIS 97 >gi|68074885|ref|XP_679359.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500086|emb|CAH94997.1| conserved hypothetical protein [Plasmodium berghei] Length = 284 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 20/189 (10%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN--- 59 L A ++ K L + G IPAII YG + K I ++ K+I + + + Sbjct: 53 TVNLEARRWERFKKKD---LLQXGYIPAIIWKYG---EEKRICINHKEIDEYAFEEEDGH 106 Query: 60 ----FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINE 115 F + + IG E+V + + DPV + F +V+E V++P + Sbjct: 107 LSLLFSARLFKIHIGDEVVECVVSHVETDPVEKHIYFLKFARVAENEITQVNIPCSIVGL 166 Query: 116 NKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEK 170 SP G + + + + NNIP +D++ L + +SI + ++ LPE Sbjct: 167 IGSPAYINGYHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLRELMHLLPEN 226 Query: 171 TSSMSQLNI 179 + + Sbjct: 227 GNVIFSEEY 235 >gi|119485328|ref|ZP_01619656.1| 50S ribosomal protein L25 [Lyngbya sp. PCC 8106] gi|119457084|gb|EAW38210.1| 50S ribosomal protein L25 [Lyngbya sp. PCC 8106] Length = 99 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR+ G IPA++YG+ ++ + L K + + + T+ Sbjct: 3 LTIECQKRAEGTK--PKALRREGLIPAVLYGHQGTESIELTLDQKKAIQLMQTATVNKTV 60 Query: 65 LTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVS 99 + L I + + + Q P + H F V Sbjct: 61 IELSIPHLSWNGKTVLHEVQAHPWKPLPYHFSFFAVK 97 >gi|213162257|ref|ZP_03347967.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 81 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%) Query: 18 KGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVI 77 KG++R LR + PAIIYG P I L + F + +LTL + + V V Sbjct: 1 KGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDGKEVKVK 60 Query: 78 PKDYQLDPVSDILIHADFLQ 97 + Q L H DF++ Sbjct: 61 AQAVQRHAYKPKLTHIDFVR 80 >gi|257058622|ref|YP_003136510.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 8802] gi|256588788|gb|ACU99674.1| ribosomal protein L25 [Cyanothece sp. PCC 8802] Length = 108 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 5/101 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K LR+ G IPA +YG+ ++ + ++AK+ L T Sbjct: 2 SLTIECQKRPEGSK--PNALRREGYIPANLYGHDGANSVALMVNAKEAVTLLKQAFANET 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 ++ ++I + + ++ Q P L+H F V Sbjct: 60 VIEVNIPHLSWTGNALIREIQAHPWKKNLLHLSFFYVGNTE 100 >gi|71892246|ref|YP_277980.1| 50S ribosomal protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109893345|sp|Q492J6|RL25_BLOPB RecName: Full=50S ribosomal protein L25 gi|71796352|gb|AAZ41103.1| 50S ribosomal subunit protein L25 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 97 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDP-KPIALSAKDISKRLYSKNFMTTI 64 + A +R KG+ R LRK + PA+IY +P PI L+ DI Sbjct: 2 LTIKANLRIYHKKGATRRLRKQNKCPAVIYNRGQEPSIPIILNQNDILHPEAVIQLYKNN 61 Query: 65 LTLDIGKELVHVIPK--DYQLDPVSDILIHADFLQV 98 + L + + K + Q P LIH DF +V Sbjct: 62 VILLFIENQQPITVKVQELQYHPFKSKLIHIDFTRV 97 >gi|83315860|ref|XP_730975.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490868|gb|EAA22540.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 285 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 13/183 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAII--YGNMS----DPKPIALSAKDISKRLYSKNFM 61 L A ++ K L+ +G IPAII YG+ + K I A + S F Sbjct: 56 LEARRWERFKKKDL--LQAHGYIPAIIWKYGDEKRICINHKEIDEYAFEEEDGHLSLLFS 113 Query: 62 TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121 + + IG E+V + + DPV + F +V E V+VP + SP Sbjct: 114 ARLFKIHIGDEVVECVVSHVEADPVEKHIYFLKFARVVENEITQVNVPCSIVGLIGSPAY 173 Query: 122 KQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSSMSQ 176 G + + + + NNIP +D++ L + +SI + ++ LPE + + Sbjct: 174 INGYHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLRELMYLLPENGNVIFS 233 Query: 177 LNI 179 Sbjct: 234 EEY 236 >gi|218245577|ref|YP_002370948.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 8801] gi|218166055|gb|ACK64792.1| ribosomal protein L25 [Cyanothece sp. PCC 8801] Length = 108 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 5/101 (4%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K LR+ G IPA +YG+ ++ + ++AK+ L T Sbjct: 2 SLTIECQQRPEGSK--PNALRREGYIPANLYGHDGANSVALMVNAKEAVTLLKKAAANET 59 Query: 64 ILTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 ++ ++I + + ++ Q P L+H F V Sbjct: 60 VIEVNIPHLSWTGNALIREIQAHPWKKNLLHLSFFYVGNTE 100 >gi|302844117|ref|XP_002953599.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] gi|300261008|gb|EFJ45223.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f. nagariensis] Length = 299 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 75/192 (39%), Gaps = 24/192 (12%) Query: 7 KLSAVMRD-KVG--KGSARLLRKNGQIPAIIY---------GNMSDPKPIALSAKDISKR 54 L A +RD + G + + + LR++G++P ++ G + D + Sbjct: 113 SLEAHVRDPEHGMARCAVKWLRRSGRVPGQVHSLMGSPGPGGRGVWELNVHF---DETSL 169 Query: 55 LYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFIN 114 +F T+ +L + + L + + V V VPVR +N Sbjct: 170 ARMCHFPRTVPSLRGHGSDIA--------NTQHPRLEGIEMIYCPVDRVVLVDVPVRLVN 221 Query: 115 ENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM 174 + +PG+++GG + ++ V N IP I V++ L + + + D+ +P T Sbjct: 222 DEMAPGVRKGGWMCMLKRTVRYKALGNAIPPYIEVNVRHLDLEQDLLVRDLPIPPGTKIY 281 Query: 175 SQL-NITIATIV 185 + N + Sbjct: 282 EKNFNAPVVRCT 293 >gi|223949451|gb|ACN28809.1| unknown [Zea mays] Length = 148 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Query: 76 VIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVS 135 V+P D S +++ ++ EG+ + V +PV F ++ PG+K+GG L + + Sbjct: 32 VLPIKVHRDENSGNILNLVMVKADEGTMLKVDLPVEFKGKDACPGLKKGGFLQKIRTSLV 91 Query: 136 LLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI-TIATIVAPI 188 LCPA +IP I VDL +L +GD + M DI + +S+ + I+A Sbjct: 92 YLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHPSLKLLSKNETMPVCKILASK 145 >gi|213026467|ref|ZP_03340914.1| 50S ribosomal protein L25 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 71 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTIL 65 ++A +R + GKG++R LR + PAIIYG P I L + F + +L Sbjct: 2 FTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVL 61 Query: 66 TLDIGKEL 73 TL + + Sbjct: 62 TLVVDGKE 69 >gi|237830665|ref|XP_002364630.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|211962294|gb|EEA97489.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|221507509|gb|EEE33113.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 313 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 15/167 (8%) Query: 18 KGSARL--LRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-----FMTTILTLD 68 K R +++ G +P I+ YG + I + F + L Sbjct: 91 KRFVRKEDIQRAGYVPCIVEKYG-IERRLAIHRDTLEALAFDEQHGHLSYLFQARLFRLR 149 Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 IG + IP Q DPV+ L F + G V +P + P ++G + Sbjct: 150 IGNWIEECIPTFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACPAYQRGYHVE 209 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEK 170 +V + C IP VD++ L +I ++D++ LP Sbjct: 210 LVMPTIRCQCVGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPAD 256 >gi|116515029|ref|YP_802658.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256883|gb|ABJ90565.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 98 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Query: 6 CKLSAVMRDKVGKGSARLLRK-NGQIPAIIYGNM--SDPKPIALSAKDISKRLYSKNFMT 62 KL A+ R+K+G ++R R + +IPAIIYG I L I KNF + Sbjct: 2 IKLQAIYRNKLGTNNSRYFRNFDKKIPAIIYGKKFLEKELFILLDHNIIFNLQKEKNFFS 61 Query: 63 TILTLDIGKELVHVIPKDYQLDPVSDILIHADF 95 + + + I +D Q I++H DF Sbjct: 62 NNFLIKLKNKSFFSILQDIQFHVFKPIILHIDF 94 >gi|153831149|ref|ZP_01983816.1| ribosomal L25p family [Vibrio cholerae 623-39] gi|148873375|gb|EDL71510.1| ribosomal L25p family [Vibrio cholerae 623-39] Length = 77 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 21 ARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKD 80 +R LR G PAI+YG + P I+L+ D+ ++ F + L I + V V P+D Sbjct: 1 SRRLRNTGYFPAIVYGGEAAPVSISLNHDDVMNQMDKPEFYEA-IVLVIDGQEVKVKPQD 59 Query: 81 YQLDPVSDILIHADFLQV 98 Q + H DF+++ Sbjct: 60 VQRHAYKPKVEHMDFIRI 77 >gi|221487715|gb|EEE25947.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 313 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 13/157 (8%) Query: 26 KNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-----FMTTILTLDIGKELVHVIP 78 + G +P I+ YG + I + F + L IG + IP Sbjct: 101 RAGYVPCIVEKYG-IERRLAIHRDTLEALAFDEQHGHLSYLFQARLFRLRIGNWIEECIP 159 Query: 79 KDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLC 138 Q DPV+ L F + G V +P + P ++G + +V + C Sbjct: 160 TFVQADPVARRLYFVKFERHVAGKISEVDIPTTMVGLLACPAYQRGYHVELVMPTIRCQC 219 Query: 139 PANNIPDSITVDLNDLKIG---DSIHMEDIR--LPEK 170 IP VD++ L +I ++D++ LP Sbjct: 220 VGAEIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPAD 256 >gi|67922147|ref|ZP_00515662.1| Ribosomal protein L25 [Crocosphaera watsonii WH 8501] gi|67856047|gb|EAM51291.1| Ribosomal protein L25 [Crocosphaera watsonii WH 8501] Length = 103 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + K LR+ G +PA +YG+ ++ +A++ K+++ L T Sbjct: 2 SLSIECQKRPENIK--PNALRREGLVPATLYGHDGTESLQLAVNTKEVALMLRGVTVNET 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSE 100 ++ L+I + K+ Q P LIH F V Sbjct: 60 VIDLNIPDLSWNGQAVIKEIQAHPWKRNLIHLSFCYVKP 98 >gi|126658262|ref|ZP_01729412.1| 50S ribosomal protein L25 [Cyanothece sp. CCY0110] gi|126620411|gb|EAZ91130.1| 50S ribosomal protein L25 [Cyanothece sp. CCY0110] Length = 100 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + KG LR+ G IPA +YG+ ++ + + K+ + L T Sbjct: 2 SLSIECKKRPENVKG--NALRREGLIPATLYGHNGTESMQLMVDQKETALMLRGVTVDET 59 Query: 64 ILTLDIGKELVHVI--PKDYQLDPVSDILIHADFLQVSE 100 ++ ++I + K+ Q P LIH F V Sbjct: 60 VIDVNIPDLSWNGQAVVKEIQAHPWKRNLIHLSFCYVKP 98 >gi|27904632|ref|NP_777758.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38258552|sp|Q89AV5|RL25_BUCBP RecName: Full=50S ribosomal protein L25 gi|27904029|gb|AAO26863.1| 50S ribosomal protein L25 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 97 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISK-RLYSKNFMTTI 64 + + R K GK ++R LR + PAII+ ++ I LS D + + +F + Sbjct: 2 LTIYGISRTKCGKKASRRLRLQNKFPAIIHVSLISNISIELSQNDFINIEMKNSDFYKSE 61 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 + L + K V ++ Q ++H DFL+VS Sbjct: 62 VILIVDKVKYIVKIQEIQRHAFKSKILHIDFLKVS 96 >gi|124505281|ref|XP_001351382.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] gi|23498189|emb|CAD49160.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] Length = 286 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 13/186 (6%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAII--YGNMS----DPKPIALSAKDISKRLYSK 58 + + A +K K ++ NG IPAII YG K I A + S Sbjct: 54 DVDIEAKCWEKFKKKEL--IQANGYIPAIIWKYGIEERICIPHKLIDEYAFEEEDGHLSL 111 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKS 118 F + + I ++V+ + + DP+ + F +V E ++VP I Sbjct: 112 LFSARLFRVHIHGKVVNCVVSHVEADPIEKHIYFLKFARVVENQITEINVPCSIIGLIGC 171 Query: 119 PGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDI--RLPEKTSS 173 P G + + + + +NIP +D++ L + +SI ++D+ LP+ + Sbjct: 172 PAYINGYHVQLAMNSIKCKVLGSNIPGPFQIDVSKLTYKEPYNSIKLKDLLYLLPDDGNV 231 Query: 174 MSQLNI 179 + Sbjct: 232 IFSEEY 237 >gi|33519924|ref|NP_878756.1| 50S ribosomal protein L25 [Candidatus Blochmannia floridanus] gi|71153130|sp|Q7VRX2|RL25_BLOFL RecName: Full=50S ribosomal protein L25 gi|33504270|emb|CAD83162.1| 50s ribosomal protein L25 [Candidatus Blochmannia floridanus] Length = 103 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTILT 66 + A++R ++ K R +RKNG PA+IY S + LS KD+S F+ Sbjct: 4 IKAILRTEIKKSITRKIRKNGGCPAVIYNKNKSPNINVQLSNKDLSHPENVHYFLKNNKV 63 Query: 67 --LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTV 104 L + + +D Q P +IH DF+ ++ S Sbjct: 64 QILINNEFTITAKIQDVQYHPYKSNIIHIDFIHITTQSRS 103 >gi|172039135|ref|YP_001805636.1| 50S ribosomal protein L25 [Cyanothece sp. ATCC 51142] gi|171700589|gb|ACB53570.1| 50S ribosomal protein L25 [Cyanothece sp. ATCC 51142] Length = 100 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + KG LR+ G IPA +YG+ ++ + + K+ + L T Sbjct: 2 SLSIECKKRPENVKG--NALRREGLIPATLYGHNGTESMQLMVDQKETALMLREVTVDET 59 Query: 64 ILTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSE 100 ++ ++I + + K+ Q P LIH F V Sbjct: 60 VIDVNIPDLSWNGKAVVKEIQAHPWKRNLIHLSFCYVKP 98 >gi|221052608|ref|XP_002261027.1| Ribosomal L25-like protein [Plasmodium knowlesi strain H] gi|194247031|emb|CAQ38215.1| Ribosomal L25-like protein [Plasmodium knowlesi strain H] Length = 285 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 11/163 (6%) Query: 28 GQIPAII--YGNMS----DPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDY 81 G IPAII YG D K I A + S F + + I +V + Sbjct: 74 GYIPAIIWKYGPEQRICIDHKLIDEYAFEEEDGHLSLLFSARLFRIHIDGNVVECVVSHV 133 Query: 82 QLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPAN 141 + DPV + F +V + +++P + P G + + + + N Sbjct: 134 ETDPVEKHIYFLKFARVVKNQVTELNIPCSIVGLIGCPAYVNGYHVQLAMNYIKCKVIGN 193 Query: 142 NIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSSMSQLNI 179 NIP +D++ L + +SI + +++ LP+ + + Sbjct: 194 NIPPPFQIDVSKLTYKEPYNSIRLGELKHLLPDDGNVVFSEEY 236 >gi|119512090|ref|ZP_01631183.1| 50S ribosomal protein L25 [Nodularia spumigena CCY9414] gi|119463248|gb|EAW44192.1| 50S ribosomal protein L25 [Nodularia spumigena CCY9414] Length = 99 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 5/99 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 ++ + R + K LR++G IPA +YG+ ++ + + AK I + L T Sbjct: 3 IQVESQKRPEGSK--PNALRRSGLIPANLYGHKGAESISLVVDAKTIERLLKQAAVNKTE 60 Query: 65 LTLDIGKELVH--VIPKDYQLDPVSDILIHADFLQVSEG 101 + L+I + + + ++ Q P + H F S Sbjct: 61 IELNIPELEWNGKTVLREVQSHPAKGFIYHVSFFATSPD 99 >gi|16329909|ref|NP_440637.1| 50S ribosomal protein L25 [Synechocystis sp. PCC 6803] gi|1652395|dbj|BAA17317.1| sll1824 [Synechocystis sp. PCC 6803] Length = 185 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + R LR+ G IPA +YG+ ++ + + K L S T Sbjct: 90 LSIECQQRPE--KVNPRALRREGLIPATLYGHNGAESISLVVDHKTAITMLRSVTVKETP 147 Query: 65 LTLDIGKELV--HVIPKDYQLDPVSDILIHADFL 96 + + I + ++ Q P L H F Sbjct: 148 IEVKIPHLSWEGEAVVQEIQCHPWRRNLYHLAFF 181 >gi|156094635|ref|XP_001613354.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802228|gb|EDL43627.1| hypothetical protein, conserved [Plasmodium vivax] Length = 285 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 13/177 (7%) Query: 14 DKVGKGSARLLRKNGQIPAII--YGNMS----DPKPIALSAKDISKRLYSKNFMTTILTL 67 +K K L+ +G IPAII YG D + I A + S F + + Sbjct: 62 EKFKKKEL--LQVHGYIPAIIWKYGAEQRICIDHRLIDEYAFEEEDGHLSLLFSARLFRI 119 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKL 127 + +V + + DPV + F +V +++P + P G + Sbjct: 120 HVDGNVVECVVSHVEADPVEKHIYFLKFARVVSNQVTELNIPCSIVGLIGCPAYVNGYHV 179 Query: 128 NVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDIR--LPEKTSSMSQLNI 179 + + + NNIP +D++ L + +SI + ++ LPE + + Sbjct: 180 QLAMNYIKCKVIGNNIPPPFQIDVSRLTYKEPYNSIKLGELAHLLPEDGNVVFSEEY 236 >gi|70943513|ref|XP_741793.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520399|emb|CAH75563.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 225 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%) Query: 14 DKVGKGSARLLRKNGQIPAII--YGNMSDPKPIALSAKDISKRLYSKN-------FMTTI 64 ++ K L+ +G IPAII YG + K I ++ K+I + + + F + Sbjct: 62 ERFKKKEL--LQAHGYIPAIIWKYG---EEKRICINHKEIDEYAFEEEDGHLSLLFSARL 116 Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 + IG E+V + + DPV + F +V E V++P + SP G Sbjct: 117 FKIHIGDEVVECVVSHVEADPVEKHIYFLKFARVVENEITQVNIPCSIVGLIGSPAYING 176 Query: 125 GKLNVVCHEVSLLCPANNIPDSITVDLNDL---KIGDSIHMEDI 165 + + + + NNIP +D++ L + +SI + ++ Sbjct: 177 YHVQLALNYIKCNVLGNNIPPPFQIDVSKLSYKEPYNSIKLREL 220 >gi|319760596|ref|YP_004124534.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] gi|318039310|gb|ADV33860.1| 50S ribosomal protein L25 [Candidatus Blochmannia vafer str. BVAF] Length = 101 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMS--DPKPIALSAKDISKRLYSKNFMTT 63 K++A +R + R LR + PAIIY + PI L+ KDI +F Sbjct: 2 FKINAELRIAIKTAGVRRLRNQEKCPAIIYYKNKKFENLPIILNNKDIQHPNSIIHFYKN 61 Query: 64 IL-TLDIGKELV-HVIPKDYQLDPVSDILIHADFL 96 + L+I + + V K+ Q P +IH DF+ Sbjct: 62 NILKLNIQNKSIVQVQIKEIQYHPYRSKIIHIDFM 96 >gi|282896707|ref|ZP_06304715.1| 50S ribosomal protein L25 [Raphidiopsis brookii D9] gi|281198425|gb|EFA73313.1| 50S ribosomal protein L25 [Raphidiopsis brookii D9] Length = 98 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ +AL AK + + L T Sbjct: 3 LTVESQKRPEGIK--PKALRRSGLIPANLYGHNGTESISLALEAKTVDRLLKQAAPNKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADFL 96 + L I + + ++ Q+ P H F Sbjct: 61 IELSIPDLQWTGKTVLREVQVHPAKGTPYHLSFF 94 >gi|282900118|ref|ZP_06308075.1| Ribosomal protein L25 [Cylindrospermopsis raciborskii CS-505] gi|281195000|gb|EFA69940.1| Ribosomal protein L25 [Cylindrospermopsis raciborskii CS-505] Length = 98 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ +A+ AK + + L T Sbjct: 3 LTVESQKRPEGIK--PKALRRSGLIPANLYGHNGTESISLAVEAKTVDRLLKQAAPNKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADFL 96 + L I + + ++ Q+ P H F Sbjct: 61 IELSIPDLQWTGRTVLREVQVHPAKGTPYHLSFF 94 >gi|298492077|ref|YP_003722254.1| Ribosomal protein L25-like protein ['Nostoc azollae' 0708] gi|298233995|gb|ADI65131.1| Ribosomal protein L25-like protein ['Nostoc azollae' 0708] Length = 98 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + + R + K + LR++G IPA +YG+ ++ + + AK + + L T Sbjct: 3 IAVESQKRPEGSK--PKALRRSGLIPANLYGHKGTESISLVVDAKVVERLLKQAAPNKTE 60 Query: 65 LTLDIGKELV--HVIPKDYQLDPVSDILIHADFL 96 + L+I + + ++ Q+ P H F Sbjct: 61 IELNIPELEWSGKTVLREVQIHPAKGTPYHLSFF 94 >gi|71153669|sp|P73289|RL25_SYNY3 RecName: Full=50S ribosomal protein L25 Length = 98 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + R LR+ G IPA +YG+ ++ + + K L S T Sbjct: 3 LSIECQQRPE--KVNPRALRREGLIPATLYGHNGAESISLVVDHKTAITMLRSVTVKETP 60 Query: 65 LTLDIGKELV--HVIPKDYQLDPVSDILIHADFL 96 + + I + ++ Q P L H F Sbjct: 61 IEVKIPHLSWEGEAVVQEIQCHPWRRNLYHLAFF 94 >gi|284928842|ref|YP_003421364.1| 50S ribosomal protein L25 [cyanobacterium UCYN-A] gi|284809301|gb|ADB95006.1| ribosomal protein L25 (general stress protein Ctc) [cyanobacterium UCYN-A] Length = 134 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 5/100 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R K LR+ G +P +YG+ ++ + + K+ + L TI Sbjct: 37 LSIQCQKRPLNTK--PNALRREGLLPTTLYGHNGTESMQLVVDKKEAALMLRDVKVNETI 94 Query: 65 LTLDIGK--ELVHVIPKDYQLDPVSDILIHADFLQVSEGS 102 + +DI VI K+ Q P LIH F V Sbjct: 95 INVDIPDLSWKGEVILKEIQAHPWKRSLIHLSFCYVLPNK 134 >gi|17232277|ref|NP_488825.1| 50S ribosomal protein L25 [Nostoc sp. PCC 7120] gi|71153116|sp|Q8YMY9|RL25_ANASP RecName: Full=50S ribosomal protein L25 gi|17133922|dbj|BAB76484.1| alr4785 [Nostoc sp. PCC 7120] Length = 99 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 5/93 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR+ G IPA +YG+ + + + AK + + L + T Sbjct: 3 LTVETKKRPEGSK--PKALRRAGFIPANLYGHNGRESISLVVDAKVVERLLKAAAVKKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADF 95 + L+I + I ++ Q+ P H F Sbjct: 61 IELNIPELEWTGKTILQEVQIHPAKGTPYHISF 93 >gi|75908275|ref|YP_322571.1| 50S ribosomal protein L25 [Anabaena variabilis ATCC 29413] gi|109893344|sp|Q3MBG0|RL25_ANAVT RecName: Full=50S ribosomal protein L25 gi|75702000|gb|ABA21676.1| LSU ribosomal protein L25P [Anabaena variabilis ATCC 29413] Length = 99 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 + R + K + LR++G IPA +YG+ + + + AK + + L + T Sbjct: 3 LTVETKKRPEGSK--PKALRRSGFIPANLYGHNGRESISLVVDAKVVERLLKAAAVKKTE 60 Query: 65 LTLDIG--KELVHVIPKDYQLDPVSDILIHADF 95 + L+I + + ++ Q+ P H F Sbjct: 61 IELNIPELEWTGKTVLQEVQIHPAKGTPYHISF 93 >gi|220907938|ref|YP_002483249.1| 50S ribosomal protein L25 [Cyanothece sp. PCC 7425] gi|219864549|gb|ACL44888.1| ribosomal protein L25 [Cyanothece sp. PCC 7425] Length = 103 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTTI 64 L +R + K LR++G IPA++YG+ ++ + + AK + T Sbjct: 2 LTLECQVRPQGSK--PNALRRSGWIPAVLYGHNGTESLSLVVKAKTAELLVRDAKLNKTP 59 Query: 65 LTLDIGKELVHVIP--KDYQLDPVSD-ILIHADFL 96 + + I ++ Q P + H F+ Sbjct: 60 IQVQISDNTWSGQVVLQEVQAHPWKTLQIYHLSFM 94 >gi|260655928|ref|ZP_05861397.1| ribosomal protein L25, Ctc-form [Jonquetella anthropi E3_33 E1] gi|260629544|gb|EEX47738.1| ribosomal protein L25, Ctc-form [Jonquetella anthropi E3_33 E1] Length = 99 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNM-SDPKPIALSAKDISKR-LYSK 58 M + K+ R++ GK LR+ G +P ++YG +P AK + Sbjct: 1 MS-ENVKIILEARNETGKEVCGRLRRQGCLPVVVYGPGMKEPLLAKTDAKAAEAYLVGDF 59 Query: 59 NFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 +TL G K + +D L+H DF Sbjct: 60 KSCQYDVTLPCGTVK-TCSIKSAAKNHGTDQLLHIDFY 96 >gi|219685943|ref|ZP_03540741.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] gi|219672517|gb|EED29558.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia garinii Far04] Length = 86 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 101 GSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSI 160 V + V S G+K+GG L V+ +V + ++P+ I +DL + GDS+ Sbjct: 1 DRRVELEKYVPIKLIGASVGVKEGGILTVLKEQVRVKSLPLDLPEFIELDLTPVNKGDSV 60 Query: 161 HMEDIRLPEKTSSM-SQLNITIATI 184 ++D+ LP + N+ + TI Sbjct: 61 FLKDLVLPSNVKLAENDENLEVVTI 85 >gi|1169120|sp|P42832|CTC_BACCL RecName: Full=General stress protein ctc gi|633148|emb|CAA58683.1| ctc [Bacillus caldolyticus] Length = 59 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 27/52 (51%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLY 56 E L A R + + R +R G IPAI+YG + K I ++A ++ K L Sbjct: 2 EIVLEAKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVTAAELEKVLR 53 >gi|22298073|ref|NP_681320.1| 50S ribosomal protein L25 [Thermosynechococcus elongatus BP-1] gi|71153668|sp|Q8DLG3|RL25_THEEB RecName: Full=50S ribosomal protein L25 gi|22294251|dbj|BAC08082.1| 50S ribosomal protein L25 [Thermosynechococcus elongatus BP-1] Length = 101 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD-PKPIALSAKDISKRLYSKN 59 M + + +R K LR+NG+IPA++YG + + + + + Sbjct: 1 MS-RSLAIEGQLRPADAK--PNALRRNGKIPAVLYGPTIESSISLVVDTRAAELLVRDAR 57 Query: 60 FMTTILTLDIGKELVHVIP--KDYQLDPVSDILIHADF 95 T + L I ++ Q P D L H F Sbjct: 58 PQKTPIQLSIPDLPWQGTVVLQEVQAHPAKDTLYHLSF 95 >gi|295698302|ref|YP_003602957.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] gi|291157435|gb|ADD79880.1| ribosomal L25p family [Candidatus Riesia pediculicola USDA] Length = 98 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDI---SKRLYSKNFMT 62 ++ A +R GK R ++K +IPAI++ + + I + KDI K + +NF Sbjct: 2 IQIGAKIRTSTGKVYNRRIKKRKEIPAILHIKKNKNRLIRIQRKDILKLEKNVNPRNFFV 61 Query: 63 TILTL-DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 + E +V ++ Q P + +IH DF +V Sbjct: 62 LQIKFSKENLEERNVRIQEVQRHPYTGEIIHIDFFEV 98 >gi|325119762|emb|CBZ55315.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 183 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 60 FMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSP 119 F + L IGK + IP Q DPV+ L F + EG V +P + P Sbjct: 11 FQARLFRLRIGKWIEECIPTFVQADPVARRLYFVKFERHVEGKISEVDIPTTMVGLLACP 70 Query: 120 GIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLK---IGDSIHMEDIR--LPEKTSSM 174 ++G + +V + C +IP VD++ L +I ++D++ LP S+ Sbjct: 71 AYQRGYHVELVMPTIRCQCVGADIPPPFFVDVSRLHYSPPYTAITLQDLQHLLPSDGSAR 130 Query: 175 SQLNITIAT 183 + +AT Sbjct: 131 FHPSYNVAT 139 >gi|156089617|ref|XP_001612215.1| hypothetical protein [Babesia bovis T2Bo] gi|154799469|gb|EDO08647.1| conserved hypothetical protein [Babesia bovis] Length = 263 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 15/151 (9%) Query: 27 NGQIPAII---------YGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVI 77 G +PA++ Y D +A D S F + L IG ++ + Sbjct: 51 EGLVPALVTLHGYPSKVYIKRGDIFSLAF---DEEHGHLSHLFTGRLYNLKIGNDIERCV 107 Query: 78 PKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLL 137 D + DP+ +L F + EG V +P + SP +G + ++ + Sbjct: 108 ITDVKCDPIEKVLYFVKFARHVEGEISEVDIPCSVVGLMASPAYLKGYHVQLMMPTIKCE 167 Query: 138 CPANNIPDSITVDLNDLKIGD---SIHMEDI 165 +P +D++ L + SI ++DI Sbjct: 168 VAGKTVPPPFQIDVSKLDYREPYNSIVLKDI 198 >gi|170077505|ref|YP_001734143.1| 50S ribosomal protein L25 [Synechococcus sp. PCC 7002] gi|169885174|gb|ACA98887.1| Ribosomal protein L25 [Synechococcus sp. PCC 7002] Length = 97 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 3/96 (3%) Query: 5 ECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGN-MSDPKPIALSAKDISKRLYSKNFMTT 63 + R + + R LR++G +P +YG+ +D ++ KD L T Sbjct: 2 SLTIECQARPEG--VNPRALRRDGLLPVNLYGHKGADSDVFVVNYKDALTLLKKVTPNET 59 Query: 64 ILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVS 99 ++ + + ++ Q P L+H F Sbjct: 60 VVEVKTPDWSGTAVVREIQSHPWKRNLLHLSFFHTD 95 >gi|222630912|gb|EEE63044.1| hypothetical protein OsJ_17852 [Oryza sativa Japonica Group] Length = 83 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIVA 186 N + V LCPA+ +P I VDL++L +G + M D+++ + I +I+ Sbjct: 14 FNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLQSPEQPICSIIG 73 Query: 187 PIS 189 + Sbjct: 74 SRA 76 >gi|159487761|ref|XP_001701891.1| predicted protein [Chlamydomonas reinhardtii] gi|158281110|gb|EDP06866.1| predicted protein [Chlamydomonas reinhardtii] Length = 373 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + V+ + D + V V VPVR +N++ +PG+K+GG + + V I Sbjct: 265 NAVTQRVEGLDLIYCPPERQVLVDVPVRLLNDDLAPGVKKGGWIALFKRTVRYKALGGAI 324 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS-QLNITIATIV 185 P I V++ ++ + + + D+ +P T N + Sbjct: 325 PPYIEVNVRNMDLDQDMLVRDMPIPPGTKLYEKDYNAPVLRCT 367 >gi|254670776|emb|CBA07078.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153] Length = 54 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Query: 140 ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMS---QLNITIATIV 185 NIP + +D ++ GD +H+ DI+LPE S+S N+ +AT+ Sbjct: 2 PANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVATVT 50 >gi|282858158|ref|ZP_06267353.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] gi|282584080|gb|EFB89453.1| 50S ribosomal protein L25 (General stress protein CTC) [Pyramidobacter piscolens W5455] Length = 101 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 5/99 (5%) Query: 1 MDQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSD---PKPIALSAKDISKRLYS 57 M + ++ R+ G LRK G +PA++YG + + Sbjct: 1 MS-EAVQIVLENREGSGSAYCGRLRKEGFLPAVVYGPALEQTYSVKVETKTMLPYLMSDD 59 Query: 58 KNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFL 96 L G+ + + K + +D L+H DF Sbjct: 60 VKKTVFAAKLPNGEVK-NCVIKSATKNYATDRLLHIDFY 97 >gi|108709803|gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing protein, expressed [Oryza sativa Japonica Group] Length = 182 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIY-----GNMSDPKPIALSAKDISKRLYSKNFM 61 + A+ R+ G +A R++G++PA++ G L D + Sbjct: 37 TIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQS 96 Query: 62 TTILTLDIG------------KELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 L+ + V+P D + +++ ++ EG+ + V++P Sbjct: 97 PYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLP 156 Query: 110 VRFINENKSPGIKQGGKLN 128 V F E+ PG+K+ K Sbjct: 157 VEFKGEDVCPGLKKENKDQ 175 >gi|223944153|gb|ACN26160.1| unknown [Zea mays] Length = 192 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 17/135 (12%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIY----GNMSDPK-PIALSAKDISKRLYSKN--- 59 + AV R G+ A RK G++PAI++ G K I++ A I K + Sbjct: 58 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSF 117 Query: 60 FMTTILTLDIGKEL---------VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPV 110 F++ + +L + E V V+P+ L +D ++ F++ + + + VP+ Sbjct: 118 FLSRLFSLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPL 177 Query: 111 RFINENKSPGIKQGG 125 FI E+ SPG+++G Sbjct: 178 MFIGEDASPGLRKGM 192 >gi|84995870|ref|XP_952657.1| hypothetical protein [Theileria annulata strain Ankara] gi|65302818|emb|CAI74925.1| hypothetical protein, conserved [Theileria annulata] Length = 273 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 27/188 (14%) Query: 23 LLRKNGQIPAII--YGN------MSDPKP-IALSAKDISKRLYSKNFMTTILTLDIGKEL 73 L G +PA+I +G S +A + + + G+ Sbjct: 47 QLLSEGLVPALITDFGPLRKICIKSHLIHKLAFDEPYAHLSHLFTGRLYNLFVKNEGQGQ 106 Query: 74 V-------HVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 I + DPV +L F + EG V++P SP +G Sbjct: 107 HSDGGVLEKCIISEVNSDPVEKVLYFIKFKRHVEGRITEVNIPCTITGLFASPAYLKGYH 166 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIG---DSIHMEDI--RLPEKTSSMSQLN--- 178 + ++ + IP +D++ L+ SI++ DI LP S + + Sbjct: 167 VELMMPTIKCEVVGKTIPPPFQIDVSSLEYNYPFSSIYLRDILHLLPSDESVLFHRDYDL 226 Query: 179 ---ITIAT 183 + T Sbjct: 227 DTQEVVCT 234 >gi|224171812|ref|XP_002339565.1| predicted protein [Populus trichocarpa] gi|222875359|gb|EEF12490.1| predicted protein [Populus trichocarpa] Length = 92 Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 104 VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHME 163 V +P +K LN + V +CPA+ IP I VDL++L +G + M Sbjct: 2 AMVSIPYPL-PTDKKFRYPYRAYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMG 60 Query: 164 DIRLPEKTSSMSQLNITIATIV 185 D+++ + + + I Sbjct: 61 DLKVHPALKLVQSKELPVVKIS 82 >gi|253795637|ref|YP_003038733.1| putative Ribosomal L25/TL5/CTC 5S rRNA binding protein [Candidatus Hodgkinia cicadicola Dsem] gi|253739945|gb|ACT34280.1| putative Ribosomal L25/TL5/CTC 5S rRNA binding protein [Candidatus Hodgkinia cicadicola Dsem] Length = 171 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 11/149 (7%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPA-IIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 L + R G ++R LR G +P ++ G +P+A++A + S + + Sbjct: 5 LKLIPRQTTGSRASRKLRSCGLVPGTVLIG----RQPLAVAACEASIKRL---AYRQQID 57 Query: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + ++ + QL S H +++QVS H P F++ K GK Sbjct: 58 AVLNGVRATLLLTNLQLSATSRRPQHVEYVQVS-TPLALTHAPTLFVDSGAPR--KAAGK 114 Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLK 155 L + ++ + +P+ I V L + Sbjct: 115 LKPIARTLTTVSSTRLVPNYIKVKLAGFE 143 >gi|71029948|ref|XP_764616.1| hypothetical protein [Theileria parva strain Muguga] gi|68351572|gb|EAN32333.1| hypothetical protein, conserved [Theileria parva] Length = 276 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 11/126 (8%) Query: 69 IGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128 + + DPV ++ F + EG V++P SP +G + Sbjct: 112 DDNVPEKCVISEVNSDPVEKVIYFIKFKRHIEGRITEVNIPCTITGLFASPAYLKGYHVE 171 Query: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGD---SIHMEDI--RLPEKTSSMSQLN----- 178 ++ + IP +D++ L SI+++DI LP S + Sbjct: 172 LMMPTIKCEVVGKTIPPPFQIDVSSLDYTHPFSSIYLKDILHLLPSDDSVFFHRDYDLDS 231 Query: 179 -ITIAT 183 + T Sbjct: 232 QEVVCT 237 >gi|221217619|ref|ZP_03589088.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia burgdorferi 72a] gi|221192565|gb|EEE18783.1| 50S ribosomal protein L25 (General stress protein CTC) [Borrelia burgdorferi 72a] Length = 60 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%) Query: 127 LNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 + V+ +V + ++P+ I +DL + GDS+ ++D+ LP I+ Sbjct: 1 MTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVII 59 >gi|291550724|emb|CBL26986.1| hypothetical protein RTO_25080 [Ruminococcus torques L2-14] Length = 77 Score = 47.4 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL--PEKTSSMSQLNITIATIV 185 + HE+S + + + VD+ +LK+GD+I + D+ + + M+ T+ TI Sbjct: 1 MLHEISFKALPAALVEKVEVDVGELKVGDTIRVCDLPIAQDKDVDLMTDAEATVVTIT 58 >gi|289608549|emb|CBI60572.1| unnamed protein product [Sordaria macrospora] Length = 88 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 65 LTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQG 124 ++++ + I KD Q DPV +++ H D L V +G V V VPV E+ G Sbjct: 10 FSIELEGKGQLAIAKDVQRDPVRNVIEHVDLLIVKKGEKVAVEVPVAVTGESAP-----G 64 Query: 125 GKLNVVCHEVSLLCPANNIPDSIT 148 V +++ A ++P+S+ Sbjct: 65 TIHLVDLQTLAIEAEATHLPESVE 88 >gi|168215664|ref|ZP_02641289.1| hypothetical protein AC7_2295 [Clostridium perfringens NCTC 8239] gi|182382250|gb|EDT79729.1| hypothetical protein AC7_2295 [Clostridium perfringens NCTC 8239] Length = 89 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R NG+ +I D I++ D+ K +K+ + L + Sbjct: 2 LNANKRDVKIK--CRKFRNNGKATGVINRKNGDNISISVKVSDLDK-FLAKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|18311019|ref|NP_562953.1| hypothetical protein CPE2037 [Clostridium perfringens str. 13] gi|168204724|ref|ZP_02630729.1| hypothetical protein AC3_2622 [Clostridium perfringens E str. JGS1987] gi|168208739|ref|ZP_02634364.1| hypothetical protein AC1_2528 [Clostridium perfringens B str. ATCC 3626] gi|168212926|ref|ZP_02638551.1| hypothetical protein AC5_2383 [Clostridium perfringens CPE str. F4969] gi|182626904|ref|ZP_02954638.1| hypothetical protein CJD_2625 [Clostridium perfringens D str. JGS1721] gi|18145701|dbj|BAB81743.1| hypothetical protein [Clostridium perfringens str. 13] gi|170663596|gb|EDT16279.1| hypothetical protein AC3_2622 [Clostridium perfringens E str. JGS1987] gi|170713203|gb|EDT25385.1| hypothetical protein AC1_2528 [Clostridium perfringens B str. ATCC 3626] gi|170715540|gb|EDT27722.1| hypothetical protein AC5_2383 [Clostridium perfringens CPE str. F4969] gi|177907754|gb|EDT70366.1| hypothetical protein CJD_2625 [Clostridium perfringens D str. JGS1721] Length = 89 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R NG+ +I D I++ D+ K +K+ + L + Sbjct: 2 LNANKRDVKIK--CRKFRNNGKATGVINRKNGDNISISVKISDLDK-FLAKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|297722347|ref|NP_001173537.1| Os03g0612600 [Oryza sativa Japonica Group] gi|255674701|dbj|BAH92265.1| Os03g0612600 [Oryza sativa Japonica Group] Length = 66 Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 130 VCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNI-TIATIVAPI 188 + + LCPA +IP I VDL +L IGD + M DI + +S+ + I+A Sbjct: 4 IRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHPSLRLLSKNETMPVCKILASK 63 >gi|328874295|gb|EGG22661.1| hypothetical protein DFA_04791 [Dictyostelium fasciculatum] Length = 238 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 2/116 (1%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTI-LTLDIGK 71 R VGK ++ LR NG +PA I G + IA+ + + + +F L+I Sbjct: 98 RVVVGKAGSKKLRYNGFVPATITGGGLPTQNIAIEWGRLYGLIKTDSFYRNRKFILNIDG 157 Query: 72 ELVHVIPKD-YQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126 + V+ +L +S+ + F++ S+ + + FI + K Sbjct: 158 KEQIVVVLAFAKLHALSERALFLKFVRTSDKAEGLTEQVLPFITFMDKINKVKEEK 213 >gi|299471227|emb|CBN79082.1| ribosomal protein L25, Ctc-form [Ectocarpus siliculosus] Length = 293 Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 9/109 (8%) Query: 83 LDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP--A 140 L PV L+ ++++ G +P++FIN + + ++G + + +L P Sbjct: 162 LHPVFRTLLSVNWIRYKAGRKYP--IPIKFINSDLNENFRKGAYIRRLKTHQHILLPEDP 219 Query: 141 NNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSS--MSQL---NITIATI 184 +P + +DL ++ G + + D+ +PE ++ N + TI Sbjct: 220 EMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLHRANEPGMWNEVVCTI 268 >gi|110803727|ref|YP_699318.1| hypothetical protein CPR_2009 [Clostridium perfringens SM101] gi|169343797|ref|ZP_02864796.1| hypothetical protein CPC_2286 [Clostridium perfringens C str. JGS1495] gi|110684228|gb|ABG87598.1| hypothetical protein CPR_2009 [Clostridium perfringens SM101] gi|169298357|gb|EDS80447.1| hypothetical protein CPC_2286 [Clostridium perfringens C str. JGS1495] Length = 89 Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A RD K R R NG+ +I D I++ D+ K +K+ + L + Sbjct: 2 LDANKRDVKIK--CRKFRNNGKATGVINRKNGDNISISVKISDLDK-FLAKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNAININLREI 89 >gi|261885632|ref|ZP_06009671.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 80 Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 32/79 (40%) Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 + G K G + + +++ C ++ +S VD++ L + D+I + DI+ Sbjct: 2 IPVKPFGTPIGFKNRGVILQSKNGLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIKTVP 61 Query: 170 KTSSMSQLNITIATIVAPI 188 + + + ++ Sbjct: 62 GVRILDADRVAVLGVIKAK 80 >gi|254457151|ref|ZP_05070579.1| cation efflux system protein [Campylobacterales bacterium GD 1] gi|207085943|gb|EDZ63227.1| cation efflux system protein [Campylobacterales bacterium GD 1] Length = 1036 Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 8/151 (5%) Query: 44 IALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGST 103 I + K++++ SKN++ + +G V + K + P++ + + Sbjct: 719 IEIDEKELARFKISKNYLLDYVASGVGGMKVSTMYKGIERYPIALRFEENERRSIESIRE 778 Query: 104 VTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHME 163 + V + F+ + +V+ E++ I + V + K + ++ Sbjct: 779 LQVKTSLGFVPLGNFAKVAYRESASVIKSEMASPVTFIYITPQVGVSATEYKKEAKVLLD 838 Query: 164 DIRLPEKT--------SSMSQLNITIATIVA 186 DI+LP + I IV Sbjct: 839 DIKLPAGYYIDWAGQSEYLDSAMQKIVWIVP 869 >gi|330841854|ref|XP_003292904.1| hypothetical protein DICPUDRAFT_41299 [Dictyostelium purpureum] gi|325076805|gb|EGC30563.1| hypothetical protein DICPUDRAFT_41299 [Dictyostelium purpureum] Length = 200 Score = 40.5 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSA---KDISKRLYSKNFMTTILTLDI 69 R GK A+ +R IPA I G K I + K + +L LD Sbjct: 57 RVVKGKAGAKRVRHAEFIPATITGGGLPLKNIQIEWGRIKGLLTTGKLYKNRKFLLNLD- 115 Query: 70 GKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVH 107 KE + Q P+S+ ++ F + +E Sbjct: 116 DKEQLIGKLAVAQFHPLSEQVLFLKFSRSTEDPKTFTS 153 >gi|66814348|ref|XP_641353.1| hypothetical protein DDB_G0280287 [Dictyostelium discoideum AX4] gi|60469376|gb|EAL67370.1| hypothetical protein DDB_G0280287 [Dictyostelium discoideum AX4] Length = 199 Score = 40.1 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 13 RDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIAL-SAKDISKRLYSKNFMTTILTLDIGK 71 R GK A+L+R N +PA I G K I++ + K + L+I Sbjct: 52 RKVKGKAGAKLVRYNDFVPATITGGGLPLKNISIEWGRINGLISSKKFYKERKFLLNIDD 111 Query: 72 E-LVHVIPKDYQLDPVSDILIHADFLQ 97 + + QL P+++ + F + Sbjct: 112 KEKIIGKLSHAQLHPITERAMFIKFCR 138 >gi|110800018|ref|YP_696717.1| hypothetical protein CPF_2294 [Clostridium perfringens ATCC 13124] gi|110674665|gb|ABG83652.1| hypothetical protein CPF_2294 [Clostridium perfringens ATCC 13124] Length = 89 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L+A RD K R R N + +I D I++ D+ K +K+ + L + Sbjct: 2 LNANKRDVKIK--CRKFRNNRKATGVINRKNGDNISISVKISDLDK-FLAKHGDHSDLEI 58 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ E+++ + Q D + +I+ + ++ Sbjct: 59 NLEGEVINTSIIEVQRDLLVHNVININLREI 89 >gi|281211670|gb|EFA85832.1| hypothetical protein PPL_01063 [Polysphondylium pallidum PN500] Length = 235 Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 + + R G+ + LR NG +PA I G + I + I + NF Sbjct: 87 TIYGMDRVVKGRAGVKRLRFNGYVPATITGGGLPLRNIVVEWGRIYGLTKTSNFYKNRKY 146 Query: 67 L--DIGKELVHVIPKDYQLDPVSDILIHADFLQVSEG 101 + E V V + VS+ + F++ ++ Sbjct: 147 VLNMNENEKVVVRLAHVEAHAVSERALFIKFVRTNDD 183 >gi|254519883|ref|ZP_05131939.1| predicted protein [Clostridium sp. 7_2_43FAA] gi|226913632|gb|EEH98833.1| predicted protein [Clostridium sp. 7_2_43FAA] Length = 92 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Query: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTL 67 L A +RD KG ++LR +G + I + I++ + + + +N + + + Sbjct: 5 LEAKLRDLKKKG--KVLRNSGLVTGTIKRKNGETSLISMVSHKLETYIL-RNGLNATMKV 61 Query: 68 DIGKELVHVIPKDYQLDPVSDILIHADFLQV 98 ++ ++ + Q D V +I+ D +++ Sbjct: 62 NLEGNVIDTKIRRAQKDIVLHNIINIDLIEI 92 >gi|319778699|ref|YP_004129612.1| DNA-directed RNA polymerase alpha subunit [Taylorella equigenitalis MCE9] gi|317108723|gb|ADU91469.1| DNA-directed RNA polymerase alpha subunit [Taylorella equigenitalis MCE9] Length = 327 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 2/80 (2%) Query: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165 V + + + + + + + + + +T+ L+ + G+ I DI Sbjct: 54 TEVQIAGVVHEYASIQGVQEDVVDILLNLKGVVFKLHGREEVTLTLSKSEPGE-IRASDI 112 Query: 166 RLPEKTSSMSQLNITIATIV 185 LP ++ N IA + Sbjct: 113 ELPHDVEIIN-PNHVIANLQ 131 >gi|228904892|ref|ZP_04068946.1| Nuclease (SNase domain protein) [Bacillus thuringiensis IBL 4222] gi|228854906|gb|EEM99510.1| Nuclease (SNase domain protein) [Bacillus thuringiensis IBL 4222] Length = 2410 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 11/98 (11%) Query: 100 EGSTVTVHVPVRFINENKSPGIKQGGKLN--VVCHEVSLLCPANNIPDSITVDLNDLKIG 157 + V +P I++ ++ K + + A+ +P +++L+IG Sbjct: 1686 WDNYVWNEIPQDLIDKKENEIHKNLFLETGARIHLRMGYGATASALPVVFNGTISELEIG 1745 Query: 158 DSIHMEDIRLPEKTSS-------MSQLNITIATIVAPI 188 D I + + + N I ++ P Sbjct: 1746 DVIEI--VAQGDGVELGNVVSGDPDDDNDGIFSVTEPR 1781 >gi|75758262|ref|ZP_00738387.1| Staphylococcal nuclease homologue [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494316|gb|EAO57407.1| Staphylococcal nuclease homologue [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 2327 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 11/98 (11%) Query: 100 EGSTVTVHVPVRFINENKSPGIKQGGKLN--VVCHEVSLLCPANNIPDSITVDLNDLKIG 157 + V +P I++ ++ K + + A+ +P +++L+IG Sbjct: 1603 WDNYVWNEIPQDLIDKKENEIHKNLFLETGARIHLRMGYGATASALPVVFNGTISELEIG 1662 Query: 158 DSIHMEDIRLPEKTSS-------MSQLNITIATIVAPI 188 D I + + + N I ++ P Sbjct: 1663 DVIEI--VAQGDGVELGNVVSGDPDDDNDGIFSVTEPR 1698 >gi|237756134|ref|ZP_04584706.1| DNA-directed RNA polymerase, alpha subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691698|gb|EEP60734.1| DNA-directed RNA polymerase, alpha subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 325 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGD--SIHMEDIRL 167 V+ + +G +V ++L I ++I D L+ + ++ +DI+ Sbjct: 59 VKIMGVPHEFTTIKGVIEDVAEIVLNLKQIRLKIDENIERDFAILEAENVGKVYAKDIKF 118 Query: 168 PEKTSSMSQLNITIATIVAP 187 P ++ ++ I TI P Sbjct: 119 PAGIELVT-PDVHICTISEP 137 >gi|188996211|ref|YP_001930462.1| DNA-directed RNA polymerase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188931278|gb|ACD65908.1| DNA-directed RNA polymerase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 324 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 142 NIPDSITVDLNDLKIGD--SIHMEDIRLPEKTSSMSQLNITIATIVAP 187 I ++I D L+ + ++ +DI+ P ++ ++ I TI P Sbjct: 91 KIDENIERDFAILEAENVGKVYAKDIKFPAGIELVT-PDVHICTISEP 137 >gi|290953418|ref|ZP_06558039.1| hypothetical protein FtulhU_03465 [Francisella tularensis subsp. holarctica URFT1] gi|295313333|ref|ZP_06803954.1| hypothetical protein FtulhU_03450 [Francisella tularensis subsp. holarctica URFT1] Length = 35 Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 28 GQIPAIIYGNMSDPKPIALSAKDISKR 54 G+IPA+IYG + + L + Sbjct: 1 GKIPAVIYGGEKEAVSVLLDLNHFPRP 27 >gi|123492955|ref|XP_001326176.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] gi|121909087|gb|EAY13953.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] Length = 3926 Score = 35.1 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 9 SAVMR--DKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66 A R +GK LR +G++P +Y P+ +++ + +SK+ L Sbjct: 98 KAQSRLQTSLGKRLLSSLRNSGKVPHEMYNQELKPEELSIDFDEEPIAYFSKHKDGHGLR 157 Query: 67 L 67 Sbjct: 158 F 158 >gi|307823466|ref|ZP_07653695.1| DNA-directed RNA polymerase, alpha subunit [Methylobacter tundripaludum SV96] gi|307735451|gb|EFO06299.1| DNA-directed RNA polymerase, alpha subunit [Methylobacter tundripaludum SV96] Length = 337 Score = 35.1 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 4/102 (3%) Query: 84 DPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNI 143 + + L + + V + G+++ ++ + L + Sbjct: 37 HSIGNALRRVLLSTIPGCAVTDVEIEGVLHEYTTIEGVQEDVIDILLN--LKKLAVVLHS 94 Query: 144 PDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNITIATIV 185 D + + L+ G + DI LP ++ ++ IA + Sbjct: 95 KDEVELTLSKHGAG-CVTAADIILPHDVEIIN-PDLVIANLT 134 >gi|240147297|ref|ZP_04745898.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] gi|257200524|gb|EEU98808.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] Length = 1090 Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 43/190 (22%) Query: 7 KLSAVMRDKVGKGSARLLR-----KNGQIP---AII----YGNMS-----DPKPIALSAK 49 ++ ++R GK ++R R + G+ P A+ YG D K +++ Sbjct: 609 QIDTILRSGGGKENSRK-RIYAKYQQGKTPEEMAVFLQKEYGTTGKGFEFDGKQVSVWFD 667 Query: 50 DISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVP 109 + + T+ L + + K+ +L + + A+ + + S Sbjct: 668 EQGMSI---GHGTSALEYPVAIMSWQEVEKEIRLQVENGTYMGANEAYLVDESEHVRLAN 724 Query: 110 VRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPE 169 F G +P+ + + L++ S +E + PE Sbjct: 725 HIFFFFRDGIG---------------------EMPEELELKLSNYPDAHSRLVELLSTPE 763 Query: 170 KTSSM-SQLN 178 + S ++ Sbjct: 764 GVELVASDMD 773 >gi|238921948|ref|YP_002935462.1| precorrin-6X reductase [Eubacterium eligens ATCC 27750] gi|238873620|gb|ACR73328.1| precorrin-6X reductase [Eubacterium eligens ATCC 27750] Length = 263 Score = 34.3 bits (77), Expect = 8.1, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 34/119 (28%), Gaps = 4/119 (3%) Query: 35 YGN----MSDPKPIALSAKDISKRLYSKNFMTTILTLDIGKELVHVIPKDYQLDPVSDIL 90 YG + I + D + + + +D + + + S + Sbjct: 36 YGKELLPGQNNVHIHVGKMDEKQMSDEIKAIHPDIVIDATHPYATQVTHNIKEACDSRHI 95 Query: 91 IHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITV 149 + L+ + E ++ + + V + + NIP+ + + Sbjct: 96 FYVRVLREENIEKAGNNADNIIYTETMKDAVRLLNEDRYIHKNVLMTTGSKNIPEYVHI 154 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.312 0.132 0.382 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,751,782,656 Number of Sequences: 14124377 Number of extensions: 67961584 Number of successful extensions: 177862 Number of sequences better than 10.0: 1665 Number of HSP's better than 10.0 without gapping: 1641 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 173735 Number of HSP's gapped (non-prelim): 1686 length of query: 191 length of database: 4,842,793,630 effective HSP length: 131 effective length of query: 60 effective length of database: 2,992,500,243 effective search space: 179550014580 effective search space used: 179550014580 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 77 (34.3 bits)