HHsearch alignment for GI: 254780419 and conserved domain: COG0124
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=97.99 E-value=1.3e-05 Score=59.68 Aligned_cols=111 Identities=21% Similarity=0.304 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCC------CCCCCCCCCC--CCCCCC-CCHHHHHH------------CCCCHH
Q ss_conf 12458999999987520365146203321------1246456645--432222-21034431------------123854
Q gi|254780419|r 141 NIVKRTRIINSMRCRMIAENFIECSTPIL------TASSPEGARD--FLVPSR-VNQGSFYA------------LPQAPQ 199 (622)
Q Consensus 141 ~l~~Rs~i~~~~R~~l~~~gF~EveTP~L------~ksTpeGArd--FlVPsR-~~~g~fYA------------LpQSPQ 199 (622)
T Consensus 17 d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~Tapv~R~~~en~~ 96 (429)
T COG0124 17 DMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELTAPVARAVAENKL 96 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCC
T ss_conf 78999999999999999809976557551116676201697433332102899948998898446674999999995622
Q ss_pred HHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEEEEC-----CCCHHHHHHHHHHHHHH
Q ss_conf 5644331057023311001103777665538000035654102-----68999999999999999
Q gi|254780419|r 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS-----FVEQDDILNTMENVLRG 259 (622)
Q Consensus 200 lyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~Ems-----F~~~edvm~l~E~li~~ 259 (622)
T Consensus 97 ~~~~------p~k~yy~g~vfRyErPQ~GR~R-qF~Q~g~E~iG~~~~~~D-AEvi~l~~~~l~~ 153 (429)
T COG0124 97 DLPK------PLKLYYFGPVFRYERPQKGRYR-QFYQFGVEVIGSDSPDAD-AEVIALAVEILEA 153 (429)
T ss_pred CCCC------CEEEEEECCEECCCCCCCCCCE-EEEECCEEEECCCCCCCC-HHHHHHHHHHHHH
T ss_conf 0368------7259983356237888888750-368767677679986538-9999999999997