HHsearch alignment for GI: 254780419 and conserved domain: COG2511
>COG2511 GatE Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) [Translation, ribosomal structure and biogenesis].
Probab=97.15 E-value=0.0047 Score=41.34 Aligned_cols=116 Identities=21% Similarity=0.288 Sum_probs=85.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCC--------CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 64012443101787524566687403784799996278766--------5210356779998764202462355204777
Q gi|254780419|r 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--------NRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367 (622)
Q Consensus 296 ~lei~dit~~~~~~~f~vf~~~~~~~~~~~v~~i~~~~~~~--------srk~~D~l~e~ak~~g~kgL~~i~~~~~~~~ 367 (622)
T Consensus 279 ~~~~~DVTdlF~~TkSkiI~~~l~~--gG~V~A~~l~~f~GlvG~EiqpGrRlGtE~AD~ar~~GvgGlfH----sDELP 352 (631)
T COG2511 279 SEEVFDVTDLFANTKSKIIRSGLKK--GGKVYAVLLPGFAGLVGREIQPGRRLGTEFADYARAYGVGGLFH----SDELP 352 (631)
T ss_pred CCCCCCHHHHHCCCCHHHHHHHHCC--CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC----CCCCC
T ss_conf 1444528988655731888875424--87699997477565223002577410357899999827775100----56675
Q ss_pred CCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 5333570255325278999999818875572699808854110013478899987730
Q gi|254780419|r 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425 (622)
Q Consensus 368 ~~~~~spi~K~l~~~~~~~l~~~~~~~~GD~i~f~a~~~~~~~~~lg~lR~~ia~~l~ 425 (622)
T Consensus 353 ~YG--------ITeeEV~~v~~~lga~~~Davvlva~~~~~~~~a~~~V~~Ra~~ai~ 402 (631)
T COG2511 353 GYG--------ITEEEVEAVRDALGAGEEDAVVLVAGEEERAKRALEAVIERAKEAIE 402 (631)
T ss_pred CCC--------CCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHC
T ss_conf 678--------79999999999847997774899707788999999999999999871