HHsearch alignment for GI: 254780419 and conserved domain: COG4085
>COG4085 Predicted RNA-binding protein, contains TRAM domain [General function prediction only].
Probab=94.80 E-value=0.25 Score=29.01 Aligned_cols=65 Identities=22% Similarity=0.151 Sum_probs=47.8
Q ss_pred HHCCCEEEEEEEECCCC--CCCCEEEEEEECCCCEEEEEECCCCHHHHHHH----CCCCCCEEEEEEEEEE
Q ss_conf 99898899997980044--46987999997798259999748815789985----2898858999999997
Q gi|254780419|r 15 SDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAK----SVRSEWVLCIDGLVMS 79 (622)
Q Consensus 15 ~~~g~~V~i~GwV~~~R--~~g~l~F~~lrD~sG~~Q~v~~~~~~~~~~~~----~l~~esvv~v~G~V~~ 79 (622)
T Consensus 48 G~l~e~v~vkg~V~~~~n~~~~gi~~l~lndgtGti~vva~~~tee~l~~n~~~p~~~eGe~veVtGrv~~ 118 (204)
T COG4085 48 GRLNEEVTVKGEVTADQNAIGGGIESLVLNDGTGTITVVASRSTEETLELNEGMPVTVEGEIVEVTGRVEE 118 (204)
T ss_pred CEEECCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEEEEEEEEEE
T ss_conf 31202532214897531012366599999779874899990673676864478873226758999888877