HHsearch alignment for GI: 254780419 and conserved domain: PRK04483

Probab=96.74  E-value=0.0071  Score=40.06  Aligned_cols=113  Identities=24%  Similarity=0.321  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCCC----C--CCCCCCCCHHHHHHC-----CCCHHH-------
Q ss_conf             245899999998752036514620332112464---5664----5--432222210344311-----238545-------
Q gi|254780419|r  142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGAR----D--FLVPSRVNQGSFYAL-----PQAPQQ-------  200 (622)
Q Consensus       142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGAr----d--FlVPsR~~~g~fYAL-----pQSPQl-------  200 (622)
T Consensus       271 ~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw~~SGH~~~Y~e~Mf~~~--~-~~~~~~lKPMNCP~H~~if~~~~rS  347 (634)
T PRK04483        271 WSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMFFTE--S-EKRTYAVKPMNCPGHVQVFNQGLHS  347 (634)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHHHHCCCHHHHHHCCCEEC--C-CCCEEEECCCCCHHHHHHHHCCCCC
T ss_conf             999999999999999982995998862513778762561645530371342--5-5403551576856487998717744


Q ss_pred             HHHHHHCCCHHHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHH---HHHHHHH
Q ss_conf             6443310570233110011037776655----38000035654102689999999999999---9999998
Q gi|254780419|r  201 YKQLLMASGFDRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVL---RGVFEEF  264 (622)
Q Consensus       201 yKQlLmv~G~dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li---~~i~~~v  264 (622)
T Consensus       348 YRdLPl-----R~aE~g~~~R~E~SG~L~GL~RvR-~FtqdDaH-IFc~~dQi~~Ei~~~l~~~~~vy~~f  411 (634)
T PRK04483        348 YRDLPI-----RYGEFGACHRNEPSGALHGILRVR-GFTQDDGH-VFCLESQIEAEVTAFHQQALAVYTAF  411 (634)
T ss_pred             HHHCCH-----HHHHCCCEEECCCCCCCCCCCCCC-CCCCCCCE-EECCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             443436-----655433022056776545745688-99889833-56389999999999999999999863